中药枳壳中环肽成分的研究

运用硅胶、凝胶和高效液相色谱进行分离纯化,根据理化常数和波谱数据鉴定化合物的结构。从中药枳壳中分离并鉴定了7个环肽成分:环-(亮氨酸1-异亮氨酸2-丙氨酸3-苏氨酸4-甘氨酸5-苏氨酸6-苯丙氨酸7)(1)、环-(甘氨酸1-亮氨酸2-缬氨酸3-亮氨酸4-脯氨酸5-丝氨酸6)(2)、环-(亮氨酸1-亮氨酸2-脯氨酸3-酪氨酸4-甘氨酸5-丝氨酸6-脯氨酸7)(3)、环-(甘氨酸1-甘氨酸2-亮氨酸3-亮氨酸4-亮氨酸5-脯氨酸6-脯氨酸7-苯丙氨酸8)(4)、环-(脯氨酸-丙氨酸)(5)、环-(丙氨酸-异亮氨酸)(6)、环-(丙氨酸-亮氨酸)(7)。除2和4外,其余环肽均为首次从中药枳壳中分离得到。     

绿僵菌SC0924含氮杂环类代谢产物及其抗荔枝霜疫霉活性

从绿僵菌(Metarhizium sp.SC0924)固体发酵物中分离得到12个含氮杂环类化合物,通过波谱分析,分别鉴定为环(丙氨酸-脯氨酸)(1)、环(脯氨酸-酪氨酸)(2)、环(缬氨酸-亮氨酸)(3)、环(亮氨酸-异亮氨酸)(4)、腺嘌呤(5)、腺嘌呤核苷(6)、尿嘧啶(7)、胸腺嘧啶(8)、胸腺嘧啶脱氧核苷(9)、4-乙酰氨基咪唑(10)、焦谷氨酸正丁酯(11)和光敏素(12).滤纸片琼脂扩散法试验表明化合物2和3具有较弱的抗荔枝霜疫霉活性.     

紫苏内生真菌Aspergillus sp.12Y03化学成分研究

采用硅胶柱层析和Sephadex LH-20凝胶柱层析等分离方法,从紫苏内生真菌Aspergillus sp.12Y03发酵产物中分离鉴定了10个化合物,经现代光谱学技术鉴定为:环-(脯氨酸-甘氨酸)(1)、环-(脯氨酸-丝氨酸)(2)、环-(丝氨酸-4-OH-脯氨酸)(3)、环-(丙氨酸-4-OH-脯氨酸)(4)、环-(苯丙氨酸-甘氨酸)(5)、环-(丙氨酸-甘氨酸)(6)、亚油酸(7)、α-亚麻酸(8)、cerevisterol(9)和22E,24R-5α,6α-环氧麦角甾-8(14),22-二烯-3β,7α-二醇(10),均为首次从该菌种中分离得到,化合物3和4具有中等强度的海虾致死活性。     

南海深海细菌Bacillus amyloliquefaciens GAS 00152抗菌代谢产物研究

采用多种色谱分离技术,从南海深海细菌Bacillus amyloliquefaciens GAS 00152发酵液中分离得到12个化合物,经波谱数据分析分别鉴定为4-苯基-3-丁烯酰胺(1)、苯乙酰胺(2)、苯乙酸-2-(4-羟苯基)乙酯(3)、对羟基苯乙醇(4)、环(甘氨酸-2-氨基丁酸)(5)、环(甘氨酸-亮氨酸)(6)、环(甘氨酸-L-脯氨酸)(7)、环(D-脯氨酸-L-缬氨酸)(8)、环(4-羟基脯氨酸-亮氨酸)(9)、环(N-甲基甘氨酸-苯丙氨酸)(10)、环(L-2-羟基脯氨酸-苯丙氨酸)(11)、环(2-哌啶酸-苯丙氨酸)(12)。其中,化合物1为新天然产物。测试化合物1~12对番木瓜炭疽菌和香蕉黑星菌的抑制活性,发现化合物9对两种热带水果致病菌显示出中等抗菌活性。     

海洋细菌Pseudomonas putida中具有抗硅藻附着的活性成分

【目的】为发现天然的防污损物质,从分离自海绵Haliclona sp.的细菌Pseudomonas putida中寻找具有抗硅藻附着活性的化合物。【方法】综合菌落生长形态、扫描电镜及16S rDNA序列分析,鉴定细菌种属;采用活性(抗硅藻附着)-化学(薄层色谱、二极管阵列高效液相和核磁共振氢谱)导向法对其中的活性组分进行分离纯化,波谱分析确定结构;采用抗硅藻附着活性模型对单体化合物进行活性复筛。【结果】该细菌鉴定为Pseudomonas putida;从其发酵液中分离得到6个环二肽,分别鉴定为环(亮氨酸-脯氨酸)(1)、环(亮氨酸-丙氨酸)(2)、环(苯丙氨酸-丙氨酸)(3)、环(缬氨酸-酪氨酸)(4)、环(丙氨酸-酪氨酸)(5)、环(丙氨酸-色氨酸)(6);化合物3和6在浓度为50μg/mL时具有明显的抑制硅藻附着活性(抑制率分别为50%和85%)。【结论】海洋细菌Pseudomonas putida中具有抗硅藻附着的活性化合物为环(苯丙氨酸-丙氨酸)和环(丙氨酸-色氨酸)。     

海洋细菌Pseudomonas sp．抗菌代谢产物的研究

从海洋细菌Pseudomonas sp.发酵液中分离鉴定9个环二肽和2个苯环类化合物,经波谱鉴定为环(酪氨酸-脯氨酸)(1),环(酪氨酸-异亮氨酸)(2),环(苯丙氨酸-脯氨酸)(3),环(缬氨酸-脯氨酸)(4),环(异亮氨酸-脯氨酸)(5),环(亮氨酸-脯氨酸)(6),环(丙氨酸-脯氨酸)(7),环(缬氨酸-丙氨酸)(8),环(丙氨酸-亮氨酸)(9),对羟基苯甲醛(10),二-(2-乙基己基)邻苯二甲酸酯(11).其中化合物1～4对多种海洋细菌显示一定的抗菌活性.     

气相色谱-质谱定量检测水产品腐败菌群体感应DKPs信号分子

【目的】为了分析水产品腐败菌群体感应的新型信号分子二酮哌嗪(DKPs)化合物,建立一种简便、灵敏的气相色谱-质谱(GC-MS)定量检测方法。【方法】通过优化气相色谱和质谱条件、培养基和提取溶剂建立定量检测方法,确定Cyclo-(L-Pro-L-Gly)、Cyclo-(L-Pro-L-Leu)、Cyclo-(L-Leu-L-Leu)和Cyclo-(L-Pro-L-Phe)4种DKPs标准品的特征离子,并检测水产品腐败菌荧光假单胞菌(Pseudomonas fluorescens)和波罗的海希瓦氏菌(Shewanella baltica)中的DKPs。【结果】4种DKPs化合物在1-200 mg/L范围内线性良好,检测限为0.06、0.10、0.06和0.04 mg/L,定量限为0.16、0.18、0.14和0.12 mg/L,回收率为51.8%-88.5%,标准偏差为1.4%-8.3%。以LB培养基为细菌培养基,氯仿作为萃取溶剂,检测的DKPs含量较高。两种水产品腐败菌都检测到DKPs活性,主要种类为Cyclo-(L-Pro-L-Leu)和Cyclo-(L-Pro-L-Phe)。随着两种细菌的生长,培养上清中DKPs含量显著增加,在12 h达到最高。【结论】建立了检测细菌DKPs的GC-MS定量方法,具有较高精密度、准确度,能够准确定量分析4种DKPs的含量。为探究水产品特定腐败菌DKPs的调控机制奠定基础。     

中国北部湾光裸方格星虫可培养微生物的分离鉴定及其活性代谢物产生菌筛选

【目的】本研究从北部湾海域光裸方格星虫(Sipunculus nudus)肠道中分离鉴定可培养微生物,并对筛选菌株的代谢物活性进行研究,为后续开发和利用光裸方格星虫肠道微生物代谢产物提供理论支持。【方法】通过微生物培养、菌株分离纯化和16S rRNA基因序列分析,分析鉴定湛江、北海、防城港三地光裸方格星虫肠道可培养微生物;采用透明圈法、可见分光光度法、平板打孔法等对产胞外活性代谢物的菌株进行筛选和活性分析。【结果】中国北部湾不同海域光裸方格星虫肠道可培养微生物包括弧菌属(Vibrio)、希瓦氏菌属(Shewanella)、假交替单胞菌属(Pseudoalteromonas)、发光杆菌属(Photobacterium)和芽孢杆菌属(Bacillus)等12个细菌属。弧菌属(Vibrio)是3个地区样本共有的优势菌群。具有产胞外水解蛋白酶、壳聚糖酶、多糖以及抑菌活性等能力的菌株主要来自假交替单胞菌属(Pseudoalteromonas)、发光杆菌属(Photobacterium)和芽孢杆菌属(Bacillus)。【结论】中国北部湾不同海域光裸方格星虫肠道可培养微生物在属的种类上存在显著性差异,且光裸方格星虫肠道菌株具有产生多种胞外活性代谢物的能力,是一种良好的海洋活性代谢物来源。     

三七环二肽成分

从三七(Panax notoginseng)的根中分离得到14个环二肽成分,通过波谱解析其结构分别鉴定为环-(亮氨酸-苏氨酸)(1)、环-(亮氨酸-异亮氨酸)(2)、环-(亮氨酸-缬氨酸)(3)、环-(异亮氨酸-缬氨酸)(4)、环-(亮氨酸-丝氨酸)(5)、环-(亮氨酸-酪氨酸)(6)、环-(缬氨酸-脯氨酸)(7)、环-(丙氨酸-脯氨酸)(8)、环-(苯丙氨酸-酪氨酸)(9)、环-(苯丙氨酸-丙氨酸)(10)、环-(苯丙氨酸-缬氨酸)(11)、环-(亮氨酸-丙氨酸)(12)、环-(异亮氨酸-丙氨酸)(13)、环-(缬氨酸-丙氨酸)(14)。其中化合物1为新化合物,化合物4～10为新天然化合物,化合物2～3、11～14为已知化合物;化合物2和11、3和4、12和13分别为一对混合物,比例分别为2：1、1：1和2：1。     

虫药美洲大蠊水溶性成分及其促血管生成活性

采用色谱手段从美洲大蠊中分离得到22个化合物,利用波谱解析鉴定了它们的结构,分别命名为甘油(1)、邻羟基苯甲酸(2)、苯丙氨酸(3)、色氨酸(4)、尿嘧啶(5)、腺嘌呤(6)、环(脯氨酸-苏氨酸)(7)、环(脯氨酸-丙氨酸)(8)、环(丙氨酸-缬氨酸)(9)、环(甘氨酸-异亮氨酸)(10)、环(甘氨酸-亮氨酸)(11)、腺嘌呤核苷(12)、次黄嘌呤核苷(13)、环(亮氨酸-丝氨酸)(14)、环(丝氨酸-苯丙氨酸)(15)、环(天冬酰胺-苯丙氨酸)(16)、环(酪氨酸-甘氨酸)(17)、环(酪氨酸-丙氨酸)(18)、环(酪氨酸-丝氨酸)(19)、环(酪氨酸-苏氨酸)(20)、环(酪氨酸-天冬氨酸)(21)和Cordyrrole A(22)。其中,化合物7~11、14~22为首次从美洲大蠊中分离得到,而化合物20和21为新的天然产物。此外,对化合物抗一氧化氮生成作用和促血管生成活性进行了测试。     

Quorum-sensing cross talk: isolation and chemical characterization of cyclic dipeptides from Pseudomonas aeruginosa and other Gram-negative bacteria

In cell-free Pseudomonas aeruginosa culture supernatants, we identified two compounds capable of activating an N-acylhomoserine lactone (AHL) biosensor. Mass spectrometry and NMR spectroscopy revealed that these compounds were not AHLs but the diketopiperazines (DKPs), cyclo(DeltaAla-L-Val) and cyclo(L-Pro-L-Tyr) respectively. These compounds were also found in cell-free supernatants from Proteus mirabilis, Citrobacter freundii and Enterobacter agglomerans [cyclo(DeltaAla-L-Val) only]. Although both DKPs were absent from Pseudomonas fluorescens and Pseudomonas alcaligenes, we isolated, from both pseudomonads, a third DKP, which was chemically characterized as cyclo(L-Phe-L-Pro). Dose-response curves using a LuxR-based AHL biosensor indicated that cyclo(DeltaAla-L-Val), cyclo(L-Pro-L-Tyr) and cyclo(L-Phe-L-Pro) activate the biosensor in a concentration-dependent manner, albeit at much higher concentrations than the natural activator N-(3-oxohexanoyl)-L-homoserine lactone (3-oxo-C6-HSL). Competition studies showed that cyclo(DeltaAla-L-Val), cyclo(L-Pro-L-Tyr) and cyclo(L-Phe-L-Pro) antagonize the 3-oxo-C6-HSL-mediated induction of bioluminescence, suggesting that these DKPs may compete for the same LuxR-binding site. Similarly, DKPs were found to be capable of activating or antagonizing other LuxR-based quorum-sensing systems, such as the N-butanoylhomoserine lactone-dependent swarming motility of Serratia liquefaciens. Although the physiological role of these DKPs has yet to be established, their activity suggests the existence of cross talk among bacterial signalling systems.     

The complete structure of the lipooligosaccharide from the halophilic bacterium Pseudoalteromonas issachenkonii KMM 3549T

Novel lipooligosaccharide components were isolated and identified from the lipooligosaccharide fraction of the halophilic marine bacterium Pseudoalteromonas issachenkonii type strain KMM 3549T. The complete structure was achieved by chemical analysis, 2D NMR spectroscopy and MALDI mass spectrometry as the following: [carbohydrate formula see text] All sugars are d-pyranoses. Hep is L-glycero-D-manno-heptose, Kdo is 3-deoxy-D-manno-oct-2-ulosonic acid, P is phosphate, residues and substituents in italic are not stoichiometrically linked. In addition, by MALDI mass spectrometry of the intact LOS, the lipid A moiety was also identified as a mixture of penta-, tetra- and triacylated species.     

2,5-Diketopiperazines Produced by Bacillus pumilus During Bacteriolysis of Arthrobacter citreus

We report the detection by gas chromatography/mass spectrometry and liquid chromatography/mass spectrometry analyses of the secreted 2,5-diketopiperazines (DKPs) cyclo(-Ala-Pro), cyclo(-Gly-Pro), cyclo(-Val-Pro), cyclo(-Ile-Pro), cyclo(-Leu-Pro), cyclo(-Pro-Pro), cyclo(-HyP-Pro), cyclo(-Met-Pro), and cyclo(-Phe-Pro) produced by Bacillus pumilus. The study focuses on a marine isolate and a laboratory test strain of B. pumilus with capabilities to lyse pregrown living cell lawns of different bacterial species, among them Arthrobacter citreus. Chromatographic methods were used to analyze induced bioactive compounds. At least 13 different DKPs are produced by B. pumilus. Both strains respond with an increased production of the DKPs cyclo(-Gly-Pro), cyclo(-Ala-Pro), and cyclo(-Val-Pro) to the presence of pasteurized A. citreus cells after 4 h in a nutrient-poor liquid medium. In agar diffusion assays, these DKPs did not cause lysis zones in living cell lawns, but they did inhibit further growth of several pregrown test bacteria in microplates even at concentrations as low as 1 μg ml^?1. Antibiotic substances produced by B. pumilus after 20 h of cultivation in a special lysis medium showed lytic activity in cell-free extracts of B. pumilus culture supernatants.     

一株蒽降解细菌的分离及降解特性研究

【目的】从盐碱土壤中筛选蒽降解菌株并分析其降解特性。【方法】采用极度稀释结果流式细胞检测法筛选分离纯化菌株,通过16S rRNA基因序列分析对菌株进行初步鉴定,采用气质联用仪(GC-MS)分析蒽的降解特性。【结果】从盐碱土壤中筛选出一株高效蒽降解菌株。经过16S rRNA基因序列分析,鉴定该菌株为Demequina salsinemorus BJ1。菌株可以利用蒽作为唯一碳源生长,降解率可达92%。在一定浓度范围内,随着蒽浓度的降低,细菌生长速率变快,降解率升高。添加外加碳源后,细菌生长速率明显变快,而对蒽降解率变低。对萃取中间代谢产物的质谱分析表明,降解蒽的中间代谢产物主要有9,10-anthracenedione (9,10-蒽醌)和Phthalic acid (邻苯二甲酸)等,说明它可能通过邻苯二甲酸途径降解蒽。【结论】筛选得到一株新的耐盐碱蒽降解菌,该菌降解效率高,对修复石油污染的土壤有一定的现实意义。     

渤海沉积物产脂肪酶细菌的筛选及其多样性分析

【目的】从渤海沉积物中分离筛选产脂肪酶细菌,分析其物种多样性,增加人们对渤海生态系统中产脂肪酶菌多样性的认识,获取高效产脂肪酶菌株,为海洋产脂肪酶微生物的挖掘提供菌群资源。【方法】分别将8个渤海沉积物样品梯度稀释涂布至吐温-80筛选平板和三丁酸甘油酯筛选平板,选择性分离产脂肪酶细菌;分析基于16SrRNA基因序列的系统发育关系,揭示这些细菌的分类地位和遗传多样性;利用对硝基苯酚法测定胞外脂肪酶活性,筛选出高效产脂肪酶菌株。【结果】从8个渤海沉积物样品中分离获得51株产脂肪酶细菌,这些菌株隶属于Bacteroidetes、Proteobacteria和Firmicutes三个门的8个属,其中Pseudoalteromonas(35.2%)、Marinobacter(23.5%)和Sulfitobacter(17.6%)是优势菌群;脂肪酶酶活性实验表明所有测定菌株都能够分泌脂肪酶,菌株70623分泌的脂肪酶酶活最高,为42.4 U/m L。【结论】渤海沉积物中可培养产脂肪酶细菌类群较为丰富,Pseudoalteromonas、Marinobacter和Sulfitobacter菌株是优势菌群,测定菌株所产胞外脂肪酶能力不同,获得了一株高效产脂肪酶菌株Marinobacter sp.70623。     

患病大鲵中弗氏柠檬酸杆菌的分离与鉴定

【目的】确定导致大鲵(Andrias davidianus)细菌性感染死亡的病原。【方法】从大鲵肝脏中分离细菌,通过Biolog微生物自动鉴定系统及分子生物学方法对纯培养的细菌进行鉴定,再用大鲵和鲫鱼分别进行人工感染试验,以确定分离菌的致病性,同时对分离到的病原菌进行药物敏感试验。【结果】从患病大鲵肝脏中分离到一株致病菌JZ01,经人工感染健康大鲵,可复制与自然发病相同的症状,且从人工感染病鲵体内再次分离到相同的病原菌。该致病菌对健康鲫鱼也有致病性。经Biolog微生物自动鉴定系统的鉴定,以及进一步的16S rDNA基因序列和系统发育分析都表明,此致病菌为弗氏柠檬酸杆菌。药物敏感性试验表明,该菌株对氨曲南、头孢三嗪、先锋噻肟等9种药物高度敏感。【结论】弗氏柠檬酸杆菌是大鲵的一种致病菌。本文在国内外首次报道了该菌对大鲵具有致病性。     

Competitive interactions in mixed-species biofilms containing the marine bacterium Pseudoalteromonas tunicata

Pseudoalteromonas tunicata is a biofilm-forming marine bacterium that is often found in association with the surface of eukaryotic organisms. It produces a range of extracellular inhibitory compounds, including an antibacterial protein (AlpP) thought to be beneficial for P. tunicata during competition for space and nutrients on surfaces. As part of our studies on the interactions between P. tunicata and the epiphytic bacterial community on the marine plant Ulva lactuca, we investigated the hypothesis that P. tunicata is a superior competitor compared with other bacteria isolated from the plant. A number of U. lactuca bacterial isolates were (i) identified by 16S rRNA gene sequencing, (ii) characterized for the production of or sensitivity to extracellular antibacterial proteins, and (iii) labeled with a fluorescent color tag (either the red fluorescent protein DsRed or green fluorescent protein). We then grew single- and mixed-species bacterial biofilms containing P. tunicata in glass flow cell reactors. In pure culture, all the marine isolates formed biofilms containing microcolony structures within 72 h. However, in mixed-species biofilms, P. tunicata removed the competing strain unless its competitor was relatively insensitive to AlpP (Pseudoalteromonas gracilis) or produced strong inhibitory activity against P. tunicata (Roseobacter gallaeciensis). Moreover, biofilm studies conducted with an AlpP- mutant of P. tunicata indicated that the mutant was less competitive when it was introduced into preestablished biofilms, suggesting that AlpP has a role during competitive biofilm formation. When single-species biofilms were allowed to form microcolonies before the introduction of a competitor, these microcolonies coexisted with P. tunicata for extended periods of time before they were removed. Two marine bacteria (R. gallaeciensis and P. tunicata) were superior competitors in this study. Our data suggest that this dominance can be attributed to the ability of these organisms to rapidly form microcolonies and their ability to produce extracellular antibacterial compounds.     

共生表皮葡萄球菌促进果蝇胚后发育

【背景】动物体定殖有多种共生微生物,这些共生微生物严重影响着宿主生理和病理,日益成为研究热点之一。【目的】分离与鉴定黑腹果蝇共生菌,探究表皮葡萄球菌对黑腹果蝇的发育影响和潜在作用机制。【方法】用CEM培养基(Carotenoid expression medium)从果蝇肠道内分离细菌,通过16SrRNA基因序列比对鉴定菌株;以发育时间和幼虫表面积检测果蝇的发育时期和生长速率;利用实时定量PCR检测果蝇促前胸腺激素与胰岛素通路的激活。【结果】从果蝇体内分离到的菌株为表皮葡萄球菌,该菌可以有效定殖于果蝇的肠道。表皮葡萄球菌通过提高果蝇生长速率而显著促进其发育。在分子水平上,表皮葡萄球菌激活PTTH和胰岛素信号以刺激宿主的生长发育。【结论】表皮葡萄球菌是果蝇的一种共生菌,可以通过调控PTTH和胰岛素信号而刺激果蝇生长发育。     

Bacterial diversity in biofilms formed on condenser tube surfaces in a nuclear power plant

To elucidate the bacterial diversity in biofilms formed on a condenser tube from a nuclear power plant, 16S rRNA gene sequences were examined using a PCR-cloning-sequencing approach. Twelve operational taxonomic units were retrieved in the clone library, and the estimated species richness was low (13.2). Most of the clones (94.7%) were affiliated with α-Proteobacteria; Planctomycetes and γ-Proteobacteria were much rarer. Interestingly, except for one clone belonging to Pseudoalteromonas, most of the sequences displayed sequence similarities <97% of those of the closest type strains. Based on 16S rRNA phylogenetic analysis, most bacteria were assigned to novel taxa above the species level. The low species richness and unusual bacterial composition may be attributable to selective pressure from chlorine in the cooling water. To prevent or control bacterial biofilms in cooling circuits, additional studies of the physiology and ecology of these species will be essential.