Sulfite oxidase activity in Thiobacillus novellus.

Thiobacillus novellus shows a maximum induction of sulfite oxidase activity and a maximum growth rate as a result of supplementing the autotrophic growth medium with 4.0 microM ammonium molybdate. Cells grown in the presence of molybdate showed approximately 10-fold increases in the amount of enzyme-associated molybdenum and in the sulfite-to-cytochrome c and sulfite-to-ferricyanide reductase activities. The effect of exogenous molybdate was not discernible with cells grown in the absence of thiosulfate. Tungsten inhibited the growth of T. novellus and the expression of sulfite oxidase activity.     

Transpositional Mutagenesis of Thiobacillus novellus and Thiobacillus versutus

Transpositional mutagenesis of Thiobacillus novellus by Tn501 was achieved by means of the incompatibility of IncP plasmids. Tn501 insertion caused three types of mutant phenotypes: isoleucine auxotrophy, lysine auxotrophy, and a reduced ability to oxidize reduced sulfur compounds and to fix CO₂. Oxidation rates for elemental sulfur (S⁰), thiosulfate (S₂O₃²⁻), and tetrathionate (S₄O₆²⁻) in mutants of the latter type were reduced relative to those of the nonmutant control strain. Incorporation of labeled bicarbonate (H¹⁴CO₃⁻) was also significantly impaired. Although suicide vehicles were not useful for the introduction of transposons into T. novellus, this method was effective for the Tn1721-induced mutagenesis of Thiobacillus versutus. Tn1721 insertions resulted in the loss of the natural resistance of T. versutus to arsenate and gentamicin and in auxotrophies for isoleucine-valine, arginine, phenylalanine, valine, and panthothenate. Transpositional mutagenesis by either method should prove to be a useful tool for further study of these and other members of the genus Thiobacillus.     

Growth factor requirement of Thiobacillus novellus

Thiobacillus novellus cannot be grown in mineral salts media unless supplied with yeast extract. The requirement is only for miniscule amounts of yeast extract and is not fully expressed unless cells grown in a complex medium are allowed to multiply in a mineral salts medium for four to five generations. Individual sulfur-containing organic compounds, namely biotin, coenzyme A, and lipoic acid, but not reduced inorganic sulfur compounds, can substitute for the yeast extract requirement. Biotin can fully satisfy this requirement at a concentration insufficient to fulfill the biosynthetic sulfur needs; further, the organisms continue to incorporate ³⁵SO₄ into cellular protein in the presence of yeast extract or biotin. It is concluded that biotin is required as a growth factor and not owing to an inability to obtain sulfur from sulfate; the reasons why coenzyme A and thiamine pyrophosphate can substitute for biotin are discussed.Non-standard Abbreviations MS Mineral Salts Base     

Resistance of Thiobacillus novellus to mitomycin C and rifampicin.

Thiobacillus novellus is highly resistant to mitomycin C and rifampicin. This resistance is not due to insusceptibility of the target molecules to the drugs, since mitomycin C cross-links the DNA and rifampicin inhibits the DNA-dependent RNA polymerase of T. novellus in vitro.     

Catabolite repression in the facultative chemoautotroph Thiobacillus novellus

Several fermentable carbon sources were found to give rise to catabolite repression of all enzymes implicated in thiosulfate oxidation in the facultative chemoautotroph, Thiobacillus novellus. Glucose was found to elicit a strong repression. Glycerol, lactate, lactose, ribose, and pyruvate caused marked repression. In all cases, the repression could be relieved only by returning the cells to a medium devoid of such fermentable substrates. On the other hand, carbon compounds (amino acids and organic acids) that are metabolizable only aerobically caused transient or no repression of the thiosulfate oxidative system. All of the enzymes believed to participate in thiosulfate oxidation, except tetrathionase, were found to be simultaneously induced and repressed. This would suggest that tetrathionate may not be a necessary intermediate in the thiosulfate-oxidation pathway of T. novellus.     

Growth and physiology of Thiobacillus novellus under nutrient-limited mixotrophic conditions.

Thiobacillus novellus was cultivated in a chemostate under the individual limitations of thiosulfate, glucose, and thiosulfate plus glucose. At dilution rate (D) of 0.05 h-1 or lower, the steady-state biomass concentration in mixotrophic medium was additive of the heterotrophic and autotrophic biomass at corresponding D values. The ambient concentrations of thiosulfate, glucose, or both in the various cultures were low and were very similar in mixotrophic, heterotrophic, and autotrophic environments at a given D value. At D = 0.05 h-1, mixotrophic cells possessed higher activities of sulfite oxidase and thiosulfate oxidation compared to autotrophic cells, as well as higher activities of glucose enzymes and glucose oxidation than heterotrophic cells. Thus, in contrast to nutrient-excess conditions, in nutrient-limited mixotrophic environments at these D values, T. novellus did not exhibit characteristics of uncoupled substrate oxidation, inhibition of substrate utilization, and repression of enzymes of energy metabolism. It is concluded that T. novellus responds to mixotrophic growth conditions differently in environments of different nutritional status, and the ecological and physiological significance of this finding is discussed.     

A novel pathway of glucose catabolism in Thiobacillus novellus

Phosphoketolase (E.C. 4.1.2.9) was found in crude extracts of Thiobacillus novellus (ATCC 8093) with a specific activity of 0.070 mol triose formed min^-1 (mg protein)^-1. The pH optimum, 6.0, temperature optimum, 43° C, and K _m , 4.27 mM, are in good agreement with values observed for phosphoketolase from other organisms.The level of phosphoketolase in lithotrophically grown T. novellus was observed to be much lower, 0.002 mol triose formed min^-1 (mg protein)^-1 than the level in heterotrophically grown cells. T. thioparus, a lithotroph, and T. intermedius, a mixotroph, were examined and found not to contain phosphoketolase. T. A2, a mixotroph reported to be very similar to T. novellus, was examined and found to have about 20% of the level of phosphoketolase as that seen in heterotrophically grown T. novellus.Fructose-6-phosphate was examined as a possible alternate substrate but was found not to be enzymatically cleaved in our system.It therefore appears that T. novellus utilizes a previously unknown combination of a partially complete hexose monophosphate pathway, the phosphoketolase reaction, and a partially complete Embden-Meyerhof-Parnas pathway, in conjunction with the Krebs Cycle, for glucose catabolism.     

Oxalate, formate, formamide, and methanol metabolism in Thiobacillus novellus.

Thiobacillus novellus was able to grow with oxalate, formate, formamide, and methanol as sole sources of carbon and energy. Extensive growth on methanol required yeast extract or vitamins. Glyoxylate carboligase was detected in extracts of oxalate-grown cells. Ribulose bisphosphate carboxylase was found in extracts of cells grown on formate, formamide, and thiosulfate. These data indicate that oxalate is utilized heterotrophically in the glycerate pathway, and formate and formamide are utilized autotrophically in the ribulose bisphosphate pathway. Nicotinamide adenine dinucleotide-linked formate dehydrogenase was present in extracts of oxalate-, formate-, formamide-, and methanol-grown cells but was absent in thiosulfate- and acetate-grown cells.     

Isolation and Characterization of a Bacteriophage for Thiobacillus novellus

A DNA-containing bacteriophage for Thiobacillus novellus has been isolated from sewage and purified by ammonium sulfate precipitation, differential centrifugation, and cesium chloride equilibrium centrifugation. The buoyant density of this phage in CsCl is 1.51 g/cm(3). Electron microscopy studies have revealed a polyhedral head about 60 nm in diameter and a tail surrounded by a number of fine filaments. It has an adsorption rate constant of 1.1 x 10(-9) ml/min, a latent period of 45 min, and an average burst size of 150. The mole guanine and cytosine content in its DNA has been estimated to be 57 to 58%. Five structural proteins with molecular weights of 62,000, 42,500, 30,500, 17,750, and 13,500 have been detected by polyacrylamide gel electrophoresis techniques.     

Properties and regulation of ribulose diphosphate carboxylase from Thiobacillus novellus

Ribulose-diphosphate carboxylase from Thiobacillus novellus has been purified to homogeneity as observed by polyacrylamide gel electrophoresis and U. V. light observation during sedimentation velocity analysis. The optimum pH for the enzyme with Tris-HCl buffers was about 8.2. Concentrations of this buffer in excess of 80 mM were inhibitory. The apparent K _m RuDP was about 14.8 M with a Hill value of 1.5, for HCO ₃ ^- the apparent K _m was about 11.7 mM with an n value of 1.18 and for Mg²⁺ about 0.61 mM. The enzyme was specific for this cation. Relatively high concentrations of either Hg²⁺ or pCMB were required before significant inhibition was observed. Activity declined slowly during a 4-hr incubation period in either 3.0 M or 8.0 M urea. Incubation for 12 hrs resulted in complete loss of activity which was not prevented by 10 mM Mg²⁺ and was not reversed by dialysis and subsequent addition of 10 mM cysteine. Polyacrylamide gel electrophoresis revealed a loss of the major band and the appearance of 2 new bands. SDS polyacrylamide gel electrophoresis gave an average M.W. of 73 500±2500 for the slower moving band and 12250 ±2500 for the faster moving. However, incubation in urea for up to 40 hrs revealed a decrease in the M.W. of the slower moving band to about 60000. The E _a for the enzyme was calculated to be about 18.85 kcal mole^-1, with the possibility of a break between 40 and 50°C. The Q ₁₀ was 3.07 between 20 to 30°C whereas between 30 to 40°C it was 3.31. Only phosphorylated compounds caused significant inhibition of enzyme activity. They included ADP, FDP, F6P, G6P, PEP, 6PG, 2-PGA, R1P, R5P and Ru5P.Abbreviations ATP adenosine-5-triphosphate - FDP fructose-1,6-diphosphate - F6P fructose-6-phosphate - G6P glucose-6-phosphate - GPDH glyceraldehyde-3-phosphate dehydrogenase - NADH nicotinamide adenine dinucleotide (reduced) - OAA oxalacetate - pCMB parachlormercuribenzoate - PEP phosphoenolpyruvate - 6PG 6-phosphogluconate - 2-PGA 2-phosphoglycerate - 3-PGA 3-phosphoglycerate - PGK 3-phosphoglyceric phosphokinase - R1P ribose-1-phosphate - R5P ribose-5-phosphate - RuDP ribulose-1,5-diphosphate - Ru5P ribulose-5-phosphate - SDS sodium dodecyl sulfate