Cytonuclear discordance and the species status of Myotis myotis and Myotis blythii (Chiroptera)

We used both highly variable mitochondrial and nuclear loci to investigate the large mouse‐eared bat species complex in the Western Palaearctic to clarify their systematic position. Although mitochondrial lineages show no species segregation and some haplotypes are shared between Myotis myotis and Myotis blythii sensu lato, Bayesian clustering methods based on multilocus genotypes indicate highly concordant nuclear and morphological species assignment. These multilocus, nuclear analyses detected only a single putative F₁ hybrid in the extensive areas of sympatry sampled, thus confirming the biological species status of M. myotis and M. blythii s.l. We propose that the strong cytonuclear discordance in these species complex results from a combination of prior spatial isolation of the two species in different glacial refugia, followed by a succession of mitochondrial introgression events that occurred during the eastward and westward expansions of M. myotis and of M. blythii, respectively. The nuclear markers further indicate the presence of a notable genetic discontinuity within M. myotis that broadly separates populations into an eastern and a western component with an overlap zone in the Balkans. This eastern and western discontinuity is also apparent in the mitochondrial lineages with the D haplogroup largely confined to samples found in Thrace and Asia Minor. None of these genetic discontinuities correspond to the distribution of the two commonly recognized M. myotis subspecies (myotis and macrocephalicus). We also show that distinct morphological subspecies within M. blythii (oxygnathus, omari, risorius and lesviacus) in Europe and the near‐East do not correlate with significant evolutionarily units, whether identified by mitochondrial or nuclear data and thus only represent local morphological variants with little taxonomic relevance.     

Genetic variability of New Zealand seagrass (Zostera muelleri) assessed at multiple spatial scales

We conducted RAPD analyses at multiple spatial scales to contribute to the conservation and future restoration of New Zealand's seagrass, Zostera muelleri Irmisch ex Asch. (Zosteraceae). Initially we focused on fine-scale genetic variation within two estuaries on the North Island, one on the East coast the other on the West coast. Within each estuary individuals were genetically similar, however, there was clear genetic separation between the two sites (genetic distance D = 0.2965). Genetic variation within a sampling location (m scale) was similar to that observed among sampling locations (km scale) within a site (21% and 28%, respectively) and smaller than that observed between sites (51%). We then expanded our sampling to include a further six populations distributed across almost the entire latitudinal (ca. 15°) gradient of the North and South Islands. At this scale genetic differences were closely correlated with coastal currents. There was a clear separation between North Island and South Island populations and further separation between the East and West coast populations of each Island. Sites located along the same section of coastline were more genetically similar than those from the opposite coast and other Island. Genetic similarity was highest within each of the sites, indicating a low degree of gene flow between populations. We recommend that any future restoration and conservation projects use only locally eco-sourced materials for population augmentations.     

Evaluation of different monitoring methods at maternity roosts of greater mouse-eared bats (Myotis myotis)

Biodiversity and Conservation - In recent years, biodiversity has declined faster than ever before in human history. Appropriate monitoring methods are needed to detect the decline of populations...     

Predicting grey‐sided vole occurrence in northern Sweden at multiple spatial scales

Forestry is continually changing the habitats for many forest‐dwelling species around the world. The grey‐sided vole (Myodes rufocanus) has declined since the 1970s in forests of northern Sweden. Previous studies suggested that this might partly be caused by reduced focal forest patch size due to clear‐cutting. Proximity and access to old pine forest and that microhabitats often contains stones have also been suggested previously but never been evaluated at multiple spatial scales. In a field study in 2010–2011 in northern Sweden, we investigated whether occurrence of grey‐sided voles would be higher in (1) large focal patches of >60 years old forest, (2) in patches with high connectivity to surrounding patches, and (3) in patches in proximity to stone fields. We trapped animals in forest patches in two study areas (Västerbotten and Norrbotten). At each trap station, we surveyed structural microhabitat characteristics. Landscape‐scale features were investigated using satellite‐based forest data combined with geological maps. Unexpectedly, the vole was almost completely absent in Norrbotten. The trap sites in Norrbotten had a considerably lower amount of stone holes compared with sites with voles in Västerbotten. We suggest this might help to explain the absence in Norrbotten. In Västerbotten, the distance from forest patches with voles to stone fields was significantly shorter than from patches without voles. In addition, connectivity to surrounding patches and size of the focal forest patches was indeed related to the occurrence of grey‐sided voles, with connectivity being the overall best predictor. Our results support previous findings on the importance of large forest patches, but also highlight the importance of connectivity for occurrence of grey‐sided voles. The results further suggest that proximity to stone fields increase habitat quality of the forests for the vole and that the presence of stone fields enhances the voles' ability to move between nearby forest patches through the matrix.     

Variability in stream macroinvertebrates at multiple spatial scales

1. We intensively sampled 16 western Oregon streams to characterize: (1) the variability in macroinvertebrate assemblages at seven spatial scales; and (2) the change in taxon richness with increasing sampling effort. An analysis of variance (ANOVA) model calculated spatial variance components for taxon richness, total density, percent individuals of Ephemeroptera, Plecoptera and Trichoptera (EPT), percent dominance and Shannon diversity.
2. At the landscape level, ecoregion and among‐streams components dominated variance for most metrics, accounting for 43–72% of total variance. However, ecoregion accounted for very little variance in total density and 36% of the variance was attributable to differences between streams. For other metrics, variance components were more evenly divided between stream and ecoregion effects.
3. Within streams, approximately 70% of variance was associated with unstructured local spatial variation and not associated with habitat type or transect position. The remaining variance was typically split about evenly between habitat and transect. Sample position within a transect (left, centre or right) accounted for virtually none of the variance for any metric.
4. New taxa per stream increased rapidly with sampling effort with the first four to eight Surber samples (500–1000 individuals counted), then increased more gradually. After counting more than 50 samples, new taxa continued to be added in stream reaches that were 80 times as long as their mean wetted width. Thus taxon richness was highly dependent on sampling effort, and comparisons between sites or streams must be normalized for sampling effort.
5. Characterization of spatial variance structure is fundamental to designing sampling programmes where spatial comparisons range from local to regional scales. Differences in metric responses across spatial scales demonstrate the importance of designing sampling strategies and analyses capable of discerning differences at the scale of interest.     

Stereotypy and variability of social calls among clustering female big-footed myotis(Myotis macrodactylus)

Echolocating bats have developed advanced auditory perception systems, predominantly using acoustic signaling to communicate with each other.They can emit a diverse range of social calls in complex behavioral contexts. This study examined the vocal repertoire of five pregnant big-footed myotis bats(Myotis macrodactylus). In the process of clustering,the last individual to return to the colony(LI) emitted social calls that correlated with behavior, as recorded on a PC-based digital recorder. These last individuals could emit 10 simple monosyllabic and 27 complex multisyllabic types of calls, constituting four types of syllables. The social calls were composed of highly stereotyped syllables, hierarchically organized by a common set of syllables. However, intra-specific variation was also found in the number of syllables,syllable order and patterns of syllable repetition across call renditions. Data were obtained to characterize the significant individual differences that existed in the maximum frequency and duration of calls. Time taken to return to the roost was negatively associated with the diversity of social calls. Our findings indicate that variability in social calls may be an effective strategy taken by individuals during reintegration into clusters of female M. macrodactylus.     

Male roosting habits and mating behaviour of Myotis myotis

Attic-dwelling male Myotis myotis use different roost sites, but prefer one (or a few) of them and visit others sporadically. Roost-site preference can change, especially during the mating season. The males use their roost sites over years. Mean occupancy of all roost sites shows a maximum during the mating season. Females of different nursery colonies meet at male roost sites as far as 12 km from their colonies. They stay, on average, four days with one male, may join several males during one mating season and may visit their mating sites over years. Males appear to show no special behaviour to attract females but extend the time they are present at the roost site during the mating season. Each male is visited by about seven adult mates, on average. Differences in reproductive success are indicated by the times males were joined by females and by the numbers of mates and copulations. Two typical mating postures, copulation and five different social calls are described. Since females of different colonies meet at the male roost sites, the mating system of Myotis myotis may favour genetic exchange between colonies.     

Effects of Hierarchical Roost Removal on Northern Long-Eared Bat (Myotis septentrionalis) Maternity Colonies

Forest roosting bats use a variety of ephemeral roosts such as snags and declining live trees. Although conservation of summer maternity habitat is considered critical for forest-roosting bats, bat response to roost loss still is poorly understood. To address this, we monitored 3 northern long-eared bat (Myotis septentrionalis) maternity colonies on Fort Knox Military Reservation, Kentucky, USA, before and after targeted roost removal during the dormant season when bats were hibernating in caves. We used 2 treatments: removal of a single highly used (primary) roost and removal of 24% of less used (secondary) roosts, and an un-manipulated control. Neither treatment altered the number of roosts used by individual bats, but secondary roost removal doubled the distances moved between sequentially used roosts. However, overall space use by and location of colonies was similar pre- and post-treatment. Patterns of roost use before and after removal treatments also were similar but bats maintained closer social connections after our treatments. Roost height, diameter at breast height, percent canopy openness, and roost species composition were similar pre- and post-treatment. We detected differences in the distribution of roosts among decay stages and crown classes pre- and post-roost removal, but this may have been a result of temperature differences between treatment years. Our results suggest that loss of a primary roost or ≤ 20% of secondary roosts in the dormant season may not cause northern long-eared bats to abandon roosting areas or substantially alter some roosting behaviors in the following active season when tree-roosts are used. Critically, tolerance limits to roost loss may be dependent upon local forest conditions, and continued research on this topic will be necessary for conservation of the northern long-eared bat across its range.     

Genetic structure of the clonal herb Tanakaea radicans (Saxifragaceae) at multiple spatial scales,revealed by nuclear and mitochondrial microsatellite markers

The genus Tanakaea is a plant genus that consists of one or two evergreen herbaceous species in Japan and China. As rithophytic plant species occur on shaded rocks, the populations are usually isolated and sporadically found in disjunct areas. To evaluate the genetic structure of the species at multiple spatial scales, 10 nuclear and mitochondrial microsatellite markers were developed. The novel markers showed high genetic variations (two to 15 alleles and H_e from 0.400 to 0.894). Clonal samples were identified with the probability of identity of 9.0E‐8. When evaluated with 11 populations in Japan, significant genetic differentiation between regional population groups was detected (F_ST = 0.313 between Shikoku and Honshu islands), suggesting they have long been isolated from each other. Overall, these markers will be useful for population genetic research to investigate clonal structure and genetic diversity and levels of genetic differentiation between the geographically isolated populations.     

GIS interpolations of witness tree records (1839–1866) for northern Wisconsin at multiple scales

To construct forest landscape of pre‐European settlement periods, we developed a GIS interpolation approach to convert witness tree records of the U.S. General Land Office (GLO) survey from point to polygon data, which better described continuously distributed vegetation. The witness tree records (1839–1866) were processed for a 3‐million ha landscape in northern Wisconsin, U.S.A. at different scales. We provided implications of processing results at each scale. Compared with traditional GLO mapping that has fixed mapping scales and generalized classifications, our approach allows presettlement forest landscapes to be analysed at the individual species level and reconstructed under various classifications. We calculated vegetation indices including relative density, dominance, and importance value for each species, and quantitatively described the possible outcomes when GLO records are analysed at three different scales (resolution). The 1 × 1‐section resolution preserved spatial information but derived the most conservative estimates of species distributions measured in percentage area, which increased at coarser resolutions. Such increases under the 2 × 2‐section resolution were in the order of three to four times for the least common species, two to three times for the medium to most common species, and one to two times for the most common or highly contagious species. We mapped the distributions of hemlock and sugar maple from the pre‐European settlement period based on their witness tree locations and reconstructed presettlement forest landscapes based on species importance values derived for all species. The results provide a unique basis to further study land cover changes occurring after European settlement.     

Identifying spatial relationships at multiple scales: principal coordinates of neighbour matrices (PCNM) and geostatistical approaches

We compared two methodological approaches – principal coordinate analysis of neighbour matrices (PCNM) and geostatistics – that both aim at extracting several spatial scales in order to identify spatial relationships between organisms and environmental variables at multiple scales. From a statistical point of view, PCNM analysis and geostatistics come from "two different worlds"– PCNM is based on classical "data analysis" while geostatistical modelling is developed in a probabilistic context. These two methods were used to investigate the spatial relationships between defoliation caused by spruce budworm Choristoneura fumiferana and bioclimatic conditions in Ontario since 1941 through a wide range of scales. On the one hand, PCNM variables related to defoliation frequency were partitioned into four spatial submodels representing respectively four spatial scales: very broad scale (ca>300 km), broad scale (ca 180 km), fine (ca 100 km), and very fine (<80 km). On the other hand, nested variogram modelling was used to identify the relevant scales. The nested variogram model was composed of four variograms with different characteristic scales close to those of the PCNM spatial submodels. Maps of PCNM submodels and kriging components revealed similar spatial patterns of defoliation frequency at very broad and broad scales while spatial patterns at fine and very fine scales looked quite different. Both methods showed that defoliation by spruce budworm occurs at the broader spatial scales but may be explained by fluctuations at the smaller scales. Finally, results based on geostatistics using a Linear Model of Coregionalisation suggested that climatic conditions can be considered to act at the level of outbreak dynamics while the tree community of spruce budworm's principal hosts controls local population dynamics.     

The energetic grooming costs imposed by a parasitic mite (Spinturnix myoti) upon its bat host (Myotis myotis)

Parasites often exert severe negative effects upon their host's fitness. Natural selection has therefore prompted the evolution of anti-parasite mechanisms such as grooming. Grooming is efficient at reducing parasitic loads in both birds and mammals, but the energetic costs it entails have not been properly quantified. We measured both the energetic metabolism and behaviour of greater mouse-eared bats submitted to three different parasite loads (no, 20 and 40 mites) during whole daily cycles. Mites greatly affected their time and energy budgets. They caused increased grooming activity, reduced the overall time devoted to resting and provoked a dramatic shortening of resting bout duration. Correspondingly, the bats' overall metabolism (oxygen consumption) increased drastically with parasite intensity and, during the course of experiments, the bats lost more weight when infested with 40 rather than 20 or no parasites. The short-term energetic constraints induced by anti-parasite grooming are probably associated with long-term detrimental effects such as a decrease in survival and overall reproductive value.