Ponded infiltration into soil with biopores — field experiment and modeling

Preferential movement of water in macropores plays an important role when the process of ponded infiltration in natural porous systems is studied. For example, the detailed knowledge of water flow through macropores is of a major importance when predicting runoff responses to rainfall events. The main objectives of this study are to detect preferential movement of water in Chernozem soil and to employ numerical modeling to describe the variably saturated flow during a field ponded infiltration experiment. The infiltration experiment was performed at the Macov experimental station (Calcari-Haplic Chernozem in Danubian Lowland, Slovakia). The experiment involved single ring ponded infiltration. At the quasi steady state phase of the experiment dye tracer was added to the infiltrating water. Then the soil profile was excavated and the penetration pattern of the applied tracer was recorded. The abundance of biopores as a product of fauna and flora was found. To quantify the preferential flow effects during the infiltration experiment, three-dimensional axisymmetric simulations were carried out by a two-dimensional dual-continuum numerical model. The water flow simulations based on measured hydraulic characteristics without consideration of preferential flow effects failed to describe the infiltration experiment adequately. The 3D axisymmetric simulation based on dual-permeability approach provided relatively realistic space-time distribution of soil water pressure below the infiltration ring.     

Cyclooxygenases and prostaglandin E2 receptors in growth plate chondrocytes in vitro and in situ – prostaglandin E2 dependent proliferation of growth plate chondrocytes

Prostaglandin E₂ (PGE₂) plays an important role in bone development and metabolism. To interfere therapeutically in the PGE₂ pathway, however, knowledge about the involved enzymes (cyclooxygenases) and receptors (PGE₂ receptors) is essential. We therefore examined the production of PGE₂ in cultured growth plate chondrocytes in vitro and the effects of exogenously added PGE₂ on cell proliferation. Furthermore, we analysed the expression and spatial distribution of cyclooxygenase (COX)-1 and COX-2 and PGE₂ receptor types EP1, EP2, EP3 and EP4 in the growth plate in situ and in vitro. PGE₂ synthesis was determined by mass spectrometry, cell proliferation by DNA [³H]-thymidine incorporation, mRNA expression of cyclooxygenases and EP receptors by RT-PCR on cultured cells and in homogenized growth plates. To determine cellular expression, frozen sections of rat tibial growth plate and primary chondrocyte cultures were stained using immunohistochemistry with polyclonal antibodies directed towards COX-1, COX-2, EP1, EP2, EP3, and EP4. Cultured growth plate chondrocytes transiently secreted PGE₂ into the culture medium. Although both enzymes were expressed in chondrocytes in vitro and in vivo, it appears that mainly COX-2 contributed to PGE₂-dependent proliferation. Exogenously added PGE₂ stimulated DNA synthesis in a dose-dependent fashion and gave a bell-shaped curve with a maximum at 10^-8 M. The EP1/EP3 specific agonist sulprostone and the EP1-selective agonist ONO-D1-004 increased DNA synthesis. The effect of PGE₂ was suppressed by ONO-8711. The expression of EP1, EP2, EP3, and EP4 receptors in situ and in vitro was observed; EP2 was homogenously expressed in all zones of the growth plate in situ, whereas EP1 expression was inhomogenous, with spared cells in the reserve zone. In cultured cells these four receptors were expressed in a subset of cells only. The most intense staining for the EP1 receptor was found in polygonal cells surrounded by matrix. Expression of receptor protein for EP3 and EP4 was observed also in rat growth plates. In cultured chrondrocytes, however, only weak expression of EP3 and EP4 receptor was detected. We suggest that in growth plate chondrocytes, COX-2 is responsible for PGE₂ release, which stimulates cell proliferation via the EP1 receptor.     

Activation of phospholipase D activity in transforming growth factor—beta—induced cell growth inhibition

Cells regulate phospholipase D(PLD) activity in response to numerous extracellular signals.Here,we investigated the involvement of PLD activity in transforming growth factor-β(TGF-β1)-mediated growth inhibition of epithelial cells.TGF-β1)-mediated growth inhibition of epithelial cells.TGF-β1 inhibits the growth of MDCK,Mv1Lu,and A-549 cells.In the presence of 0.4% butanol,TGF-β1 induces an increase in the formation of phosphatidylbutanol,a unique product catalyzed by PLD.TGF-β1 also induces an increase in phosphatidic acid (PA) level in A-549 and MDCK cells.TGF-β1 induces an increase in the levels of DAG labeled with [^3H]-myristic acid in A-549 and MDCK cells but not in Mv1Lu cells.No increase of DAG was observed in cells prelabeled with [^3H]-arachidonic acid.The data presented suggest that PLD activation is involved in the TGF-β1-induced cell growth inhibition.     

Root growth inhibition and ultrastructural changes in radish root tips after treatment with aqueous extracts of Fallopia japonica and F. ×bohemica rhizomes

Allelopathic compounds released by invasive alien plants can suppress the growth of plants in their vicinity. The aim of this study was to investigate changes in tissue and cell structure in roots of radish seedlings treated with 10% aqueous extracts of rhizomes from the invasive knotweeds Fallopia japonica and F. ×bohemica. After 7 days of growth without and with aqueous extracts from these rhizomes, the anatomical and ultrastructural changes in the radish seedling roots were analyzed with light and transmission electron microscopy, and hydrogen peroxide was localized with diaminobenzidine, to define oxidative stress. The roots of radish seedlings treated with the knotweed extracts were shorter and thicker, due to the shorter and wider shapes of their cortex cells, which were organized in more columns than the control roots. There were signs of cell damage and oxidative stress in the root cap cells, and to a lesser extent in the meristematic zone. As well as the irregularly shaped nuclei and plasma membrane detached from the cell wall, the most prominent ultrastructural effects in the root cap cells of these aqueous rhizome extracts were the ring-shaped form of the mitochondria and large endoplasmic reticulum bodies. Excessive vacuolization was seen for the cells of the root apical meristem.

     

Fusarium mycotoxins in forage maize — Detection and evaluation

The deoxynivalenol concentrations found in forage maize ranged between 0.24 and 14.29 mg/kg DM (detected by ELISA). When highly contaminated samples were analysed for deoxynivalenol by HPLC or LC-MS the resulting concentrations were in the mean about 50% lower. Furthermore, using LC-MS other type-A and type-B trichothecenes, zearalenone and α-zearalenol were found in these samples. The differences between ELISA and HPLC/LC-MS data for deoxynivalenol are assumed to result from cross-reactions of other trichothecenes with the antibodies used in ELISA and toxin losses from sample purification procedures needed for HPLC and LC-MS analysis. Presented at the 26^th Mykotoxin-Workshop in Herrsching, Germany, May 17–19, 2004     

Baeyer–Villiger oxidation with peracid generated in situ by CaLB-CLEA catalyzed perhydrolysis

Candida antarctica lipase B, immobilized as cross linked enzyme aggregates (CLEAs) was used to mediate the Baeyer–Villiger oxidation of cyclohexanone to ɛ-caprolactone, and the reaction was compared with the one using Novozym^® 435 as catalyst. The conversion was dependent on the initial concentration of cyclohexanone, and was about 90% after 48 h at concentrations of up to 0.25 M but was decreased at higher concentrations. Caprolactone concentrations up to 0.6 M had no effect on the reaction efficiency. Among the cyclic ketones tested, the highest degree of conversion was achieved for cyclopentanone (88%) and the lowest for cyclooctanone (about 2%). The effect of methyl substitution and position of substitution on the cycloketone was studied using methylcyclohexanone and it has shown to influence the conversion efficiency. Both hydrogen peroxide and the reaction by-product acetic acid had a deleterious effect on the stability of the biocatalyst.     

CaСl2 Salt Signaling in Primary Root Architecture and Lateral Root Emergence in Arabidopsis thaliana

Russian Journal of Plant Physiology - Plant root architecture modulates during developmental stages and adjusts with the environmental condition. The cytosolic calcium which is a ubiquitous...     

Trichoderma harzianum—interaction with plants and effect on growth response

The fungus Trichoderma harzianum which was applied to pathogen-free soil, induced an increase in emergence of seedlings, plant height, leaf area and dry weight. The fungus was applied to the soil by three different methods: conidial suspension, wheat-bran/peat preparation and seed coating. The most prominent effect was observed in the wheat-bran/peat preparation. Responses occurred in different plant growth substrates such as sandy loam soil, autoclaved soil, vermiculite, peat and a mixture of vermiculite and peat (1:1, v/v). T. harzianum was also found in roots of plants growing in soil treated with the fungus.     

Root–shoot growth responses during interspecific competition quantified using allometric modelling

Background and Aims

Plant competition studies are restricted by the difficulty of quantifying root systems of competitors. Analyses are usually limited to above-ground traits. Here, a new approach to address this issue is reported.

Methods

Root system weights of competing plants can be estimated from: shoot weights of competitors; combined root weights of competitors; and slopes (scaling exponents, α) and intercepts (allometric coefficients, β) of ln-regressions of root weight on shoot weight of isolated plants. If competition induces no change in root : shoot growth, α and β values of competing and isolated plants will be equal. Measured combined root weight of competitors will equal that estimated allometrically from measured shoot weights of each competing plant. Combined root weights can be partitioned directly among competitors. If, as will be more usual, competition changes relative root and shoot growth, the competitors'' combined root weight will not equal that estimated allometrically and cannot be partitioned directly. However, if the isolated-plant α and β values are adjusted until the estimated combined root weight of competitors matches the measured combined root weight, the latter can be partitioned among competitors using their new α and β values. The approach is illustrated using two herbaceous species, Dactylis glomerata and Plantago lanceolata.

Key Results

Allometric modelling revealed a large and continuous increase in the root : shoot ratio by Dactylis, but not Plantago, during competition. This was associated with a superior whole-plant dry weight increase in Dactylis, which was ultimately 2·5-fold greater than that of Plantago. Whole-plant growth dominance of Dactylis over Plantago, as deduced from allometric modelling, occurred 14–24 d earlier than suggested by shoot data alone.

Conclusion

Given reasonable assumptions, allometric modelling can analyse competitive interactions in any species mixture, and overcomes a long-standing problem in studies of competition.     

LncRNA ANCR is positively correlated with transforming growth factor-β1 in patients with osteoarthritis

Transforming growth factor-β (TGF-β) signaling plays pivotal roles in the pathogenesis of osteoarthritis, while TGF-β signaling in certain diseases models is regulated by the long noncoding RNA (lncRNA) antidifferentiation noncoding RNA (ANCR). Therefore, ANCR may also participate in osteoarthritis. In this study, the expression of ANCR and TGF-β1 in the plasma of osteoarthritis patients and healthy controls was detected by real-time quantitative polymerase chain reaction and enzyme-linked immunosorbent assay, respectively. The diagnostic value of ANCR for osteoarthritis was evaluated by receiver operating characteristic receiver operating characteristic (ROC) curve analysis. The correlation between the plasma levels of ANCR and TGF-β1 was analyzed by the Pearson correlation coefficient. The ANCR expression vector was transfected into cells of the human chondrocyte cell line CHON-001 (ATCC CRL-2846), and the effect on TGF-β1 expression and cell proliferation was detected by Western blot and cell counting kit-8 assay, respectively. We observed that the plasma levels of ANCR were significantly lower, while the plasma levels of TGF-β1 were significantly higher in osteoarthritis patients than those in healthy controls. Downregulation of ANCR effectively distinguished osteoarthritis patients from healthy controls. ANCR and TGF-β1 expression was negatively correlated in osteoarthritis patients but not in healthy controls. ANCR overexpression promoted the proliferation of chondrocytes and inhibited TGF-β1 expression. We concluded that ANCR might participate in osteoarthritis by downregulating TGF-β1 and promote the proliferation of chondrocytes.     

Variation in Virus Symptom Development and Root Architecture Attributes at the Onset of Storage Root Initiation in ‘Beauregard’ Sweetpotato Plants Grown with or without Nitrogen

It has been shown that virus infections, often symptomless, significantly limit sweetpotato productivity, especially in regions characterized by low input agricultural systems. In sweetpotatoes, the successful emergence and development of lateral roots (LRs), the main determinant of root architecture, determines the competency of adventitious roots to undergo storage root initiation. This study aimed to investigate the effect of some plant viruses on root architecture attributes during the onset of storage root initiation in ‘Beauregard’ sweetpotatoes that were grown with or without the presence of nitrogen. In two replicate experiments, virus-tested plants consistently failed to show visible symptoms at 20 days regardless of nitrogen treatment. In both experiments, the severity of symptom development among infected plants ranged from 25 to 118% when compared to the controls (virus tested plants grown in the presence of nitrogen). The presence of a complex of viruses (Sweet potato feathery mottle virus, Sweet potato virus G, Sweet potato virus C, and Sweet potato virus 2) was associated with 51% reduction in adventitious root number among plants grown without nitrogen. The effect of virus treatments on first order LR development depended on the presence or absence of nitrogen. In the presence of nitrogen, only plants infected with Sweet potato chlorotic stunt virus showed reductions in first order LR length, number, and density, which were decreased by 33%, 12%, and 11%, respectively, when compared to the controls. In the absence of nitrogen, virus tested and infected plants manifested significant reductions for all first order LR attributes. These results provide evidence that virus infection directly influences sweetpotato yield potential by reducing both the number of adventitious roots and LR development. These findings provide a framework for understanding how virus infection reduces sweetpotato yield and could lead to the development of novel strategies to mitigate virus effects on sweetpotato productivity.     

Ameloblastin in Hertwig’s Epithelial Root Sheath Regulates Tooth Root Formation and Development

Tooth root formation begins after the completion of crown morphogenesis. At the end edge of the tooth crown, inner and outer enamel epithelia form Hertwig’s epithelial root sheath (HERS). HERS extends along with dental follicular tissue for root formation. Ameloblastin (AMBN) is an enamel matrix protein secreted by ameloblasts and HERS derived cells. A number of enamel proteins are eliminated in root formation, except for AMBN. AMBN may be related to tooth root formation; however, its role in this process remains unclear. In this study, we found AMBN in the basal portion of HERS of lower first molar in mice, but not at the tip. We designed and synthesized small interfering RNA (siRNA) targeting AMBN based on the mouse sequence. When AMBN siRNA was injected into a prospective mandibular first molar of postnatal day 10 mice, the root became shorter 10 days later. Furthermore, HERS in these mice revealed a multilayered appearance and 5-bromo-2′-deoxyuridine (BrdU) positive cells increased in the outer layers. In vitro experiments, when cells were compared with and without transiently expressing AMBN mRNA, expression of growth suppressor genes such as p21^Cip1 and p27^Kip1 was enhanced without AMBN and BrdU incorporation increased. Thus, AMBN may regulate differentiation state of HERS derived cells. Moreover, our results suggest that the expression of AMBN in HERS functions as a trigger for normal root formation.     

Do symplasmic networks in cambial zones correspond with secondary growth patterns?

The plasmodesmal (PD) network in the cambial zone of Arabidopsis thaliana hypocotyls was analysed using electron microscopy and dye-coupling studies and compared to those of internodes of Populus nigra and Solanum lycopersicum. In all species, PD densities and frequencies undergo alterations in topologically successive cambial walls reflecting species-specific patterns of PD degradation and PD insertion during cell development. Longitudinal PD fission is responsible for an abrupt increment of PD numbers in specific walls of the youngest derivatives at the xylem and/or phloem side. Here, PDs seem to mediate positional signalling to control tissue fate and early cell determination. PD numbers at all cambial interfaces of A. thaliana correspond to those of the herbaceous tomato, but are higher with the woody poplar. This suggests a positive correlation between PD frequencies and the rapidity of cell division activity. Photoactivated green fluorescent protein (26 kDa) did not diffuse through cambial PDs of A. thaliana. This is in keeping with the common size exclusion limit (SEL) of 8–10 kDa observed for PDs at the youngest interfaces of tomato and poplar which may mediate diffusive exchange of developmental signals of equal molecular size. The regular growth patterns in internodal cambial zones of poplar and tomato result from synchronized cell division activity of neighbouring initials. A. thaliana hypocotyls have an irregular mode of secondary growth. Here, signalling through PDs in misaligned radial walls between non-homologous derivatives may control tissue development. The observed organizational differences between the cambia cast doubts on the suitability of A. thaliana as a model plant for cambial research.     

Changes in water use with growth in Ulmus pumila in semiarid sandy land of northern China

Key message

Ulmus pumila vary its water use strategy from seedling to maturity in a water-limited sandy land by adopting different photosynthetical capacities, water use efficiencies and morphological traits.

Abstract

Regeneration failure of natural Ulmus pumila populations has become a growing concern related to vegetation conservation and prediction of environmental change in the sandy lands of northern China. To better understand the life-history strategies of U. pumila and its adaptation to drought in semiarid environments, we studied ecophysiological and morphological traits related to water use in an age sequence of U. pumila representing four age classes: current-year seedlings (Uc), age 2- to 5-year-old saplings (Us), juveniles (Uj), and mature trees (Um). A comparison of hydrogen isotope data in xylem sap, soil water in different layers and groundwater showed that Uc relied on the soil water in the topsoil (0–40 cm), Us and Uj absorbed soil water from deeper soil (>40 cm), while Um mainly used stable groundwater with very deep (>2 m) taproots. Significantly lower predawn leaf water potentials were observed in Uc than in Uj or Um, suggesting that Uc experienced more severe water stress and had a weaker capacity to recovery. Moreover, Uc had the highest daily maximum net assimilation rate, daily maximum transpiration rate and daily maximum stomatal conductance, all of which decreased remarkably at midday. A “go for broke” strategy is probably practiced by Uc which try to provide the growth they need to become established, but with a great risk of mortality. Um used a more conservative strategy by effectively regulating the instantaneous water-use efficiency, and maintaining both stable gas exchange levels and significantly higher long-term water-use efficiency. Uj endured and adapted to drought conditions by developing steeper leaf angles, denser leaf pubescence and more stomata than differently aged plants. Our findings illustrate that significantly different water-use strategies were developed by U. pumila trees as they grew from seedlings to maturity, which were based on different water sources.     

Changes in Root Exudates and Root Proteins in Groundnut–Pseudomonas sp. Interaction Contribute to Root Colonization by Bacteria and Defense Response of the Host

Journal of Plant Growth Regulation - Selection and application of rhizobacteria, for improved plant health will benefit from a complete understanding of the plant–bacteria interaction. Root...     

Seasonal variation in light- and temperature-dependent growth of marine planktonic diatoms in in situ dialysis cultures in the Trondheimsfjord,norway (63°N)

Three species of diatoms, Skeletonema costatum (Grev.) Cleve, Thalassiosira gravida Cleve, and T. pseudonana (Hustedt) Hasle et Heimdal, were grown in in situ dialysis culture in the Trondheimsfjord at depths of 0.5 and 4 m. The rates of growth and the chemical composition of exponentially growing cells were monitored and related to seasonal changes in illumination and temperature. Functions correlating growth rate with temperature were deduced. Growth took place from February to November. During this period temperature ranged from ?1 to 16°C, the average photon flux density (ifI) (per 24 h) from 9 to 570 μE · m^?2 · s^?1 (0.5 m depth), and the length of the days (I > 1 μE · m^?2 · s^?1) from 6 to 24 h. Light-limited growth was evident when the product of the average daily light and the chlorophyll/N ratio was < 10; this occurred mostly in early spring and late autumn. Peak densities (> 800 for the Thalassiosira spp. and > 1300–1400 μE · m^?2 · s^?1 for Skeletonema) seem to inhibit growth. The highest rates recorded were ≈1.6 doubl. · day^?1 (July, 15–16°C).The three species exhibit different ecological behaviour. Skeletonema is eurythermal (Q₁₀ = 1.8), whereas Thalassiosira pseudonana favours high temperatures, and T. gravida temperatures < 10°C. Moreover, Skeletonema has generally less chlorophyll and more phosphorus and ATP (≈ 1.4 ×) than the other two species. In Skeletonema, the ATP level seems related to the light-governed growth rate, and independent of temperature. In Thalassiosira no such correlation was found.     

Selection of cold‐tolerant plants for growth in soils contaminated with organics

A mixture of organic chemicals (MOC) containing equal molar amounts of benzoic acid, hexadecane, 2,2‐dimethyl 4,n‐propyl‐benzene, phenanthrene, pyrene, and either cycloheptane or cis‐decahydronaphthalene (cis‐decalin) was applied to soil at rates of 0 to 8000 mg/kg. In a plant‐screening experiment, growth responses of four legume and five nonlegume species were determined at 10 and 25°C. The MOC applied at 2000 mg/kg reduced the growth of several species without resulting in significant seedling death. At 10°C, the growth of alpine bluegrass (Poa alpina L.) in the 1000 and 2000 mg/kg treatments of soil increased by more than 185%. In a plant growth response experiment, alpine bluegrass and alfalfa (Medicago sativa L.) were grown in soil that had been contaminated at rates of 0 and 2000 mg/kg. At 14 weeks, the shoot and root dry weights of alfalfa were 97% lower in the contaminated soil, while the shoot dry weight, root dry weight, and root length of alpine bluegrass were 135,235 and 268% higher, respectively. Except for pyrene, <23% of the compounds comprising the MOC remained in the soil after 4 weeks and <5% after 14 weeks. The disappearance of the MOC was not significantly influenced by the presence of alfalfa or alpine bluegrass.     

Thirty years of in situ tree growth under elevated CO2: a model for future forest responses?

Rising concentrations of atmospheric carbon dioxide have been predicted to stimulate the growth of forest trees. However, long-term effects on trees growing to maturity and to canopy closure while exposed to elevated CO₂ have never been examined. We compared tree ring chronologies of Mediterranean Quercus ilex which have been continuously exposed to elevated CO₂ (around 650 μmol mol^–1) since they were seedlings, near two separate natural CO₂ springs with those from trees at nearby ambient-CO₂‘control’ sites. Trees grown under high CO₂ for 30 years (1964–93) showed a 12% greater final radial stem width than those growing at the ambient-CO₂ control sites. However, this stimulation was largely due to responses when trees were young. By the time trees were 25–30 y old the annual difference in tree ring width between low and high CO₂ grown trees had disappeared. At any given tree age, elevated CO₂ had a relatively greater positive effect on tree ring width in years with a dry spring compared to years with more rainfall between April and May. This indicates a beneficial effect of elevated CO₂ on tree water relations under drought stress. Our data suggest that the early regeneration phase of forest stands can be accelerated in CO₂-enriched atmospheres and that maximum biomass per land area may be reached sooner than under lower CO₂ concentrations. In our study, high CO₂ grown Q. ilex trees reached the same stem basal area at the age of 26 y as control trees at 29 y, i.e. three years earlier (faster turnover of carbon?). Reliable predictions of the future development of forests need to account for the variable responses of trees over their entire lifetime. Such responses to elevated CO₂ can presently only be assessed at such unique field sites.