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1.
Sylvain Antoniazza Ricardo Kanitz Samuel Neuenschwander Reto Burri Arnaud Gaigher Alexandre Roulin Jérôme Goudet 《Molecular ecology》2014,23(22):5508-5523
Gradients of variation—or clines—have always intrigued biologists. Classically, they have been interpreted as the outcomes of antagonistic interactions between selection and gene flow. Alternatively, clines may also establish neutrally with isolation by distance (IBD) or secondary contact between previously isolated populations. The relative importance of natural selection and these two neutral processes in the establishment of clinal variation can be tested by comparing genetic differentiation at neutral genetic markers and at the studied trait. A third neutral process, surfing of a newly arisen mutation during the colonization of a new habitat, is more difficult to test. Here, we designed a spatially explicit approximate Bayesian computation (ABC) simulation framework to evaluate whether the strong cline in the genetically based reddish coloration observed in the European barn owl (Tyto alba) arose as a by‐product of a range expansion or whether selection has to be invoked to explain this colour cline, for which we have previously ruled out the actions of IBD or secondary contact. Using ABC simulations and genetic data on 390 individuals from 20 locations genotyped at 22 microsatellites loci, we first determined how barn owls colonized Europe after the last glaciation. Using these results in new simulations on the evolution of the colour phenotype, and assuming various genetic architectures for the colour trait, we demonstrate that the observed colour cline cannot be due to the surfing of a neutral mutation. Taking advantage of spatially explicit ABC, which proved to be a powerful method to disentangle the respective roles of selection and drift in range expansions, we conclude that the formation of the colour cline observed in the barn owl must be due to natural selection. 相似文献
2.
MAŁGORZATA OŻGO ZDZISŁAW BOGUCKI 《Biological journal of the Linnean Society. Linnean Society of London》2011,104(2):462-470
At the eastern margins of the geographical distribution in Europe, populations of Cepaea nemoralis are sparse and limited to urban environments to which they are possibly confined by relatively warmer climates. In 1999 we introduced 1101 C. nemoralis individuals originating from nine urban populations to a rural location in the area. The snails established a viable population, which suggests that confinement to urban settings is dispersal‐ rather than climate‐limited. The snails filled available habitats at a rate of approximately 400–600 m2 year?1. On the whole, morph frequencies remained remarkably stable; changes that occurred are attributable to segregation of alleles or chromosomes. However, snails responded to habitat heterogeneity: consistent and predictable divergence occurred between habitat types, such that light‐shelled snails were repeatedly more frequent in the open than in adjoining shaded habitats. This suggests the operation of climatic and/or visual selection. As the whole area encompassing seven distinct habitat patches was only 0.3 ha, and the maximum duration of population divergence was only 11 years (fewer than four snail generations), these results indicate extremely small temporal and spatial scales of adaptation during initial phases of population establishment and spread. © 2011 The Linnean Society of London, Biological Journal of the Linnean Society, 2011, 104 , 462–470. 相似文献
3.
Philip A. R. Hockey Clélia Sirami Guy F. Midgley Hassan A. Babiker 《Diversity & distributions》2011,17(2):254-261
Aim Apparent anthropogenic warming has been underway in South Africa for several decades, a period over which significant range shifts have been observed in some indigenous bird species. We asked whether these range shifts by birds are clearly consistent with either climate change or land use change being the primary driver. Location South Africa. Methods We categorized recent range changes among 408 South African terrestrial bird species and, using generalized linear mixed models, analysed ecological attributes of those species that have and have not changed their ranges. Results Fifty‐six of the 408 taxa studied have undergone significant range shifts. Most extended their ranges towards the south (towards cooler latitudes, consistent with climate‐change drivers) or west (towards drier and warmer habitats, inconsistent with climate drivers but consistent with land use drivers); very few moved east or north. Both southward and westward movers were habitat generalists. Furthermore, southward movers were mobile taxa (migrants and nomads), whereas westward movers were associated with human‐modified elements in the landscape, such as croplands, plantations or buildings. Main conclusions The results suggest that both land use changes and climate change may simultaneously be influencing dynamic range shifts by South African birds, but separating the relative strengths of these two drivers is challenging, not least because both are operating concurrently and may influence some species simultaneously. Those species that respond to land use change by contracting their ranges are likely to be among the species that will be most impacted by climate change if land use practices with negative impacts are occurring in areas anticipated to become climatic refugia for these species. This highlights a pressing need to develop dynamic models of species’ potential range shifts and changing abundances that incorporate population and dispersal processes, as well as ecological processes that influence habitat suitability. 相似文献
4.
Sami Merilaita 《Evolutionary ecology》2001,15(2):103-116
The colour polymorphic isopod Idotea baltica inhabits the brown alga Fucus vesiculosus which is often colonised by the white epizoite Electra crustulenta (Bryozoa). In an experiment the predation risk for the different colour morphs of I. baltica was highly dependent on background colouration. Morph frequencies and Electra density varied substantially among 10 collecting sites but correlated poorly with each other, suggesting that local selection for cryptic colouration may be counteracted by gene flow. Indeed, estimates based on four polymorphic allozymes suggested rate of gene flow to be high. These results support the hypothesis that locally varying selection for cryptic colouration counteracted by gene flow contributes to the maintenance of colour polymorphism in I. baltica. The visual differences between the microhabitats and the differential microhabitat use between males and females seem to result in different patterns of selection on males and females for cryptic colouration. Also this is likely to play an important role for the polymorphism. 相似文献
5.
Thomas Schmitt Marco Zimmermann 《Journal of Zoological Systematics and Evolutionary Research》2012,50(2):106-115
As a consequence of postglacial range expansion, hybrid zones evolved where different genetic lineages met. In this study, we analysed the Chalk‐hill Blue Polyommatus coridon all along the contact zone of two expansive lineages. This zone stretches from the sandy areas of north‐eastern Germany, along the mountain ranges of the German–Czech border and throughout the eastern Alps. We studied allozymes (19 loci) of 38 populations (1542 individuals) and compared these data sets against 15 populations of the western and 15 populations of the eastern lineages and found different degrees of hybridization. Thus, the calcareous regions of Thuringia and Sachsen‐Anhalt were mostly colonized by the western lineage. The middle mountain ranges between Bavaria and Bohemia represented a strong barrier blocking further expansion and thus completely impeding hybridization in this region. More intense hybridization was detected in the populations of the eastern Alps, especially in the north‐eastern part, where the Danube most probably acted as an expansion corridor for both lineages followed by intensive hybridization. In the south‐eastern Alps, hybrid populations were mostly detected in the easternmost parts and along the larger river valley of Drava and Mur; pure western populations dominated in the other areas of this region. These results show that the degree of hybridization along a contact zone is correlated with the ecological demands of a species and the regional physical geographic circumstances. This finding was proved for the Chalk‐hill Blue in our study but is also the most likely scenario in most animal and plant species. 相似文献
6.
Climate change is contributing to the widespread redistribution, and increasingly the loss, of species. Geographical range shifts among many species were detected rapidly after predictions of the potential importance of climate change were specified 35 years ago: species are shifting their ranges towards the poles and often to higher elevations in mountainous areas. Early tests of these predictions were largely qualitative, though extraordinarily rapid and broadly based, and statistical tests distinguishing between climate change and other global change drivers provided quantitative evidence that climate change had already begun to cause species’ geographical ranges to shift. I review two mechanisms enabling this process, namely development of approaches for accounting for dispersal that contributes to range expansion, and identification of factors that alter persistence and lead to range loss. Dispersal in the context of range expansion depends on an array of processes, like population growth rates in novel environments, rates of individual species movements to new locations, and how quickly areas of climatically tolerable habitat shift. These factors can be tied together in well-understood mathematical frameworks or modelled statistically, leading to better prediction of extinction risk as climate changes. Yet, species'' increasing exposures to novel climate conditions can exceed their tolerances and raise the likelihood of local extinction and consequent range losses. Such losses are the consequence of processes acting on individuals, driven by factors, such as the growing frequency and severity of extreme weather, that contribute local extinction risks for populations and species. Many mechanisms can govern how species respond to climate change, and rapid progress in global change research creates many opportunities to inform policy and improve conservation outcomes in the early stages of the sixth mass extinction. 相似文献
7.
Elucidating the processes responsible for maintaining polymorphism at ecologically relevant genes is intimately related to understanding the interplay between selection imposed by habitat heterogeneity and a species' capacity for dispersal in the face of environmental constraints. In this paper, we used a model-based approach to solve equilibria of balanced polymorphism, given values of fitness and larval dispersal among different habitats in the acorn barnacle Semibalanus balanoides from the Gulf of St Lawrence. Our results showed that allele frequencies observed at both MPI* and GPI* loci represented stable equilibria, given empirical estimates of fitness values, and that considerably more larvae dispersed from one region (north) to the other (south) than vice versa. Dispersal conditions were predicted to be similar for the maintenance of polymorphism at both loci. Moreover, the values of asymmetrical dispersal required by the model to reach stable equilibria were compatible with empirical estimates of larval dispersal and oceanic circulation documented in this system. Overall, this study illustrated the usefulness of a modified and computable version of Bulmer's model (1972) in order to test hypotheses of balanced polymorphism resulting from interactions between spatial selection and asymmetrical dispersal. 相似文献
8.
Cécile Berthouly‐Salazar Cang Hui Tim M. Blackburn Coline Gaboriaud Berndt J. van Rensburg Bettine Jansen van Vuuren Johannes J. Le Roux 《Molecular ecology》2013,22(23):5793-5804
Conventional wisdom predicts that sequential founder events will cause genetic diversity to erode in species with expanding geographic ranges, limiting evolutionary potential at the range margin. Here, we show that invasive European starlings (Sturnus vulgaris) in South Africa preserve genetic diversity during range expansion, possibly as a result of frequent long‐distance dispersal events. We further show that unfavourable environmental conditions trigger enhanced dispersal, as indicated by signatures of selection detected across the expanding range. This brings genetic variation to the expansion front, counterbalancing the cumulative effects of sequential founding events and optimizing standing genetic diversity and thus evolutionary potential at range margins during spread. Therefore, dispersal strategies should be highlighted as key determinants of the ecological and evolutionary performances of species in novel environments and in response to global environmental change. 相似文献
9.
A long-standing question in evolutionary biology is what becomes of adaptive traits when a species expands its range into novel environments. Here, we report the results of a study on an adaptive colour pattern polymorphism (stripes) of the coqui frog, Eleutherodactylus coqui, following its introduction to Hawaii from Puerto Rico. We compared population differentiation ( ) for the stripes locus-which underlies this colour pattern polymorphism-with neutral microsatellite loci to test for a signature of selection among native and introduced populations. Among native populations, for stripes were lower than expected under the neutral model, suggesting uniform balancing selection. Alternatively, among introduced populations, for stripes did not differ from the neutral model. These results suggest that the evolutionary dynamics of this previously adaptive trait have become dominated by random genetic drift following the range expansion. 相似文献
10.
REBECCA C. FULLER ASHLEY M. JOHNSON 《Biological journal of the Linnean Society. Linnean Society of London》2009,98(3):489-500
Rare male mating advantage (a form of negative frequency dependence) is frequently proposed as a mechanism for the maintenance of genetic variation within populations. This hypothesis is attractive for systems with pronounced male colour polymorphism because it can maintain particularly high levels of variation. We tested for negative frequency-dependent mating success between yellow and red male colour patterns in bluefin killifish, Lucania goodei . Lucania goodei populations harbour substantial colour pattern polymorphism, and a large proportion of this variation has a genetic basis. We established outdoor mesocosms with red and yellow males in three different ratios: yellow rare (one yellow ♂ : five red ♂), even (three yellow ♂ : three red ♂), and red rare (five yellow ♂ : one red ♂). We obtained eggs and used microsatellites to determine paternity. By contrast to expectations, we found no support for a rare male mating advantage. Red males had slightly higher spawning success than yellow males, particularly in replicates with large clutches and when red males were rare. However, yellow males did not have higher mating success when rare. We discuss alternative mechanisms for the maintenance of the polymorphism as well as the potential reasons for the lack of a rare male mating advantage. © 2009 The Linnean Society of London, Biological Journal of the Linnean Society , 2009, 98 , 489–500. 相似文献
11.
Abstract Woody plants have been increasing in many woodland and savanna ecosystems owing to land use changes in recent decades. We examined the effects of encroachment by the indigenous shrub Leptospermum scoparium (Myrtaceae) on herb‐rich Eucalyptus camaldulensis woodlands in southern Australia. Species richness and compositional patterns were examined under the canopy of L. scoparium and in surrounding open areas to determine the species most susceptible to structural changes. Richness was significantly lower in areas of moderate to high L. scoparium cover (>15%), suggesting that a threshold shrub cover caused major change in this ecosystem. Shrubs were associated with a significant reduction in above‐ground biomass of the ground‐layer flora and a significant shift in community composition. The few species that were positively associated with high L. scoparium cover were also common in the woodland flora; no new species were recorded under the shrub canopy. Important environmental changes associated with L. scoparium cover were decreased light availability and increased litter cover, which were likely a consequence of encroachment. Leptospermum scoparium cover was also associated with greater surface soil moisture, which may be a consequence of increased shading under the shrub canopy or indicate favourable soil conditions for L. scoparium establishment. Reductions in species richness and abundance of the germinable seed bank were found in soil samples taken from under L. scoparium. With ongoing recruitment of L. scoparium and consequent increases in shrub cover, ground‐layer diversity in these species‐rich woodlands should continue to decline over time. 相似文献
12.
The world's population is growing and demand for food, feed, fiber, and fuel is increasing, placing greater demand on land and its resources for crop production. We review previously published estimates of global scale cropland availability, discuss the underlying assumptions that lead to differences between estimates, and illustrate the consequences of applying different estimates in model‐based assessments of land‐use change. The review estimates a range from 1552 to 5131 Mha, which includes 1550 Mha that is already cropland. Hence, the lowest estimates indicate that there is almost no room for cropland expansion, while the highest estimates indicate that cropland could potentially expand to over three times its current area. Differences can largely be attributed to institutional assumptions, i.e. which land covers/uses (e.g. forests or grasslands) are societally or governmentally allowed to convert to cropland, while there was little variation in biophysical assumptions. Estimates based on comparable assumptions showed a variation of up to 84%, which originated mainly from different underlying data sources. On the basis of this synthesis of the assumptions underlying these estimates, we constructed a high, a medium, and a low estimate of cropland availability that are representative of the range of estimates in the reviewed studies. We apply these estimates in a land‐change model to illustrate the consequences on cropland expansion and intensification as well as deforestation. While uncertainty in cropland availability is hardly addressed in global land‐use change assessments, the results indicate a large range of estimates with important consequences for model‐based assessments. 相似文献
13.
Alexander F. Christensen 《Global Ecology and Biogeography》2000,9(5):415-420
Historical evidence indicates that Great‐tailed Grackles colonized the Basin of Mexico from the Gulf Coast lowlands in the fifteenth century. They were probably assisted by an intentional introduction, but colonization succeeded because of anthropogenic habitat alterations over the previous two centuries. During the Colonial period, grackles withdrew from the Basin, only to recolonize it in recent decades. This withdrawal was also due probably to changes in land use, including drainage of much of the water from the Basin's lakes. 相似文献
14.
Wlasiuk G Garza JC Lessa EP 《Evolution; international journal of organic evolution》2003,57(4):913-926
Among tuco-tucos, Ctenomys rionegrensis is especially amenable to the study of the forces driving population differentiation because of the restricted geographic range it occupies in Uruguay. Within this limited area, the Rio Negro tuco-tuco is limited to sandy soils. It nonetheless exhibits remarkable variation in pelage color, including melanic, agouti, and dark-backed individuals. Two hypotheses have been put forth to explain this pattern: (1) local differentiation and fixation of alternative pelage types by genetic drift under limited gene flow; or (2) fixation by natural selection that may take place even in the presence of gene flow. A previous allozyme study rejected the genetic drift hypothesis on the basis of high inferred levels of migration. New estimates of gene flow from microsatellites and mitochondrial cytochrome b sequences were obtained for C. rionegrensis populations to further test these hypotheses. Much lower levels of gene flow were estimated with these more sensitive markers. Microsatellite-based estimates of gene flow are close to zero and may come closest to estimating current levels of migration. A lack of equilibrium between migration and genetic drift is also strongly suggested by the absence of an isolation-by-distance pattern found in all three genetic datasets. The microsatellite genotype data show that the species is strongly structured geographically, with subpopulations constituting distinct genetic entities. If current levels of gene flow are very low, as indicated by the new data, the local fixation of alternative alleles, including those responsible for pelage color polymorphism, is possible by drift alone. A scenario is thus proposed in which the species expanded in the recent past from a more restricted geographic range and has subsequently differentiated in near isolation, with genetic drift possibly playing a primary role in overall genetic differentiation. The local fixation of pelage color types could also be due to drift, but selection on this trait cannot be ruled out without direct analysis. 相似文献
15.
Clélia Sirami Paul Caplat Simon Popy Alex Clamens Raphaël Arlettaz Frédéric Jiguet Lluís Brotons Jean‐Louis Martin 《Global Ecology and Biogeography》2017,26(4):385-394
Aim The impact of multiple stressors on biodiversity is one of the most pressing questions in ecology and biodiversity conservation. Here we critically assess how often and efficiently two main drivers of global change have been simultaneously integrated into research, with the aim of providing practical solutions for better integration in the future. We focus on the integration of climate change (CC) and land‐use change (LUC) when studying changes in species distributions. Location Global. Methods We analysed the peer‐reviewed literature on the effects of CC and LUC on observed changes in species distributions, i.e. including species range and abundance, between 2000 and 2014. Results Studies integrating CC and LUC remain extremely scarce, which hampers our ability to develop appropriate conservation strategies. The lack of CC–LUC integration is likely to be a result of insufficient recognition of the co‐occurrence of CC and LUC at all scales, covariation and interactions between CC and LUC, as well as correlations between species thermal and habitat requirements. Practical guidelines for the study of these interactive effects include considering multiple drivers and processes when designing studies, using available long‐term datasets on multiple drivers, revisiting single‐driver studies with additional drivers or conducting comparative studies and meta‐analyses. Combining various methodological approaches, including time lags and adaptation processes, represent further avenues to improve global change science. Main conclusions Despite repeated claims for a better integration of multiple drivers, the effects of CC and LUC on species distributions and abundances have been mostly studied in isolation, which calls for a shift of standards towards more integrative global change science. The guidelines proposed here will encourage study designs that account for multiple drivers and improve our understanding of synergies or antagonisms among drivers. 相似文献
16.
Hedrick PW 《American journal of physical anthropology》2003,121(2):151-156
The incidence of albinism in Hopi Indians has been estimated as approximately 1 in 200 individuals. It has been suggested that \"cultural\" selection as the result of a mating advantage of males with albinism has been important in the maintenance of this high incidence. To examine this hypothesis quantitatively, a model that includes male-mating advantage, mutation, and viability selection is analyzed. In order to play an important role in the maintenance of the high incidence of albinism, the necessary mating advantage of males with albinism appears unrealistically high. However, if the extent of viability selection against individuals with albinism is not as large as previously assumed, the necessary amount of mating advantage is not as high. Other related aspects are also discussed here, such as the type of albinism in Hopi Indians and its impact, the conditions for a polymorphism with male-mating advantage and viability selection, and the time necessary to change the incidence of albinism either by the relaxation or institution of male-mating advantage. 相似文献
17.
Mark A. Stevenson Suzanne McGowan N. John Anderson Robert H. Foy Peter R. Leavitt Yvonne R. McElarney Daniel R. Engstrom Sergi Pla‐Rabés 《Global Change Biology》2016,22(4):1490-1504
Planted forests are increasing in many upland regions worldwide, but knowledge about their potential effects on algal communities of catchment lakes is relatively unknown. Here, the effects of afforestation were investigated using palaeolimnology at six upland lake sites in the north‐west of Ireland subject to different extents of forest plantation cover (4–64% of catchment area). 210Pb‐dated sediment cores were analysed for carotenoid pigments from algae, stable isotopes of bulk carbon (δ13C) and nitrogen (δ15N), and C/N ratios. In lakes with >50% of their catchment area covered by plantations, there were two‐ to sixfold increases in pigments from cryptophytes (alloxanthin) and significant but lower increases (39–116%) in those from colonial cyanobacteria (canthaxanthin), but no response from biomarkers of total algal abundance (β‐carotene). In contrast, lakes in catchments with <20% afforestation exhibited no consistent response to forestry practices, although all lakes exhibited fluctuations in pigments and geochemical variables due to peat cutting and upland grazing prior to forest plantation. Taken together, patterns suggest that increases in cyanobacteria and cryptophyte abundance reflect a combination of mineral and nutrient enrichment associated with forest fertilization and organic matter influx which may have facilitated growth of mixotrophic taxa. This study demonstrates that planted forests can alter the abundance and community structure of algae in upland humic lakes of Ireland and Northern Ireland, despite long histories of prior catchment disturbance. 相似文献
18.
We studied the levels of genetic diversity of Swietenia macrophylla (big leaf mahogany) in five successional plots in the Santa Rosa National Park, Guanacaste, Costa Rica. We selected sites with different lengths of time since the last major disturbance (typically fire): 6, 9, 15 and 20 years. In addition, we also included a patch of mature forest that had experienced selective logging and other human activity in the past 100 years. Genetic diversity was assessed using five polymorphic DNA microsatellite loci. We found a total of 21 alleles in the five loci examined, in which the number of alleles present varied among the five sites studied. Allelic diversity varied between sites ranging from 20 to 14 alleles, and our data revealed that earlier successional sites have more alleles than older sites. There was significant heterogeneity in allele frequencies between sites; however, genetic differentiation between populations was low (FST = 0.063) indicating that most of the variation was found within sites and extensive gene flow between sites. In addition, our analysis also showed that genetic diversity of adult trees does not solely determine the diversity of seedlings and saplings found around them, also supporting the existence of extensive gene flow. The impact of these findings for the design of conservation strategies for tropical dry forests trees is discussed. 相似文献
19.
KENNETH G. ROSS MICHAEL J. B. KRIEGER LAURENT KELLER D. DEWAYNE SHOEMAKER 《Biological journal of the Linnean Society. Linnean Society of London》2007,92(3):541-560
We studied population genetic variation and structure in the fire ant Solenopsis invicta using nuclear genotypic and mitochondrial DNA (mtDNA) sequence data obtained from samples collected throughout its native range. Geographic populations are strongly differentiated at both genomes, with such structure more pronounced in Brazil than in Argentina. Higher-level regional structure is evident from the occurrence of isolation-by-distance patterns among populations, the recognition of clusters of genetically similar, geographically adjacent populations by ordination analysis, and the detection of an mtDNA discontinuity between Argentina and Brazil coinciding with a previously identified landform of biogeographical relevance. Multiple lines of evidence from both genomes suggest that the ancestors of the ants we studied resembled extant northern Argentine S. invicta , and that existing Brazilian populations were established more recently by serial long-distance colonizations and/or range expansions. The most compelling evidence for this is the corresponding increase in F K (a measure of divergence from a hypothetical ancestor) and decrease in genetic diversity with distance from the Corrientes population in northern Argentina. Relatively deep sequence divergence among several mtDNA clades, coupled with geographical partitioning of many of them, suggests prolonged occupation of South America by S. invicta in more-or-less isolated regional populations. Such populations appear, in some cases, to have come into secondary contact without regaining the capacity to freely interbreed. We conclude that nominal S. invicta in its native range comprises multiple entities that are sufficiently genetically isolated and diverged to have embarked on independent evolutionary paths. © 2007 The Linnean Society of London, Biological Journal of the Linnean Society , 2007, 92 , 541–560. 相似文献
20.
Invasive species provide opportunities for investigating evolutionary aspects of colonization processes, including initial foundations of populations and geographic expansion. Using microsatellite markers and historical information, we characterized the genetic patterns of the invasion of the western corn rootworm (WCR), a pest of corn crops, in its largest area of expansion in Europe: Central and South‐Eastern (CSE) Europe. We found that the invaded area probably corresponds to a single expanding population resulting from a single introduction of WCR and that gene flow is geographically limited within the population. In contrast to what is expected in classical colonization processes, an increase in genetic variation was observed from the center to the edge of the outbreak. Control measures against WCR at the center of the outbreak may have decreased effective population size in this area which could explain this observed pattern of genetic variation. We also found that small remote outbreaks in southern Germany and north‐eastern Italy most likely originated from long‐distance dispersal events from CSE Europe. We conclude that the large European outbreak is expanding by stratified dispersal, involving both continuous diffusion and discontinuous long‐distance dispersal. This latter mode of dispersal may accelerate the expansion of WCR in Europe in the future. 相似文献