Facultative nitrogen fixation by canopy legumes in a lowland tropical forest

Symbiotic dinitrogen (N₂) fixation is often invoked to explain the N richness of tropical forests as ostensibly N₂-fixing trees can be a major component of the community. Such arguments assume N₂ fixers are fixing N when present. However, in laboratory experiments, legumes consistently reduce N₂ fixation in response to increased soil N availability. These contrasting views of N₂ fixation as either obligate or facultative have drastically different implications for the N cycle of tropical forests. We tested these models by directly measuring N₂-fixing root nodules and nitrogenase activity of individual canopy-dominant legume trees (Inga sp.) across several lowland forest types. Fixation was substantial in disturbed forests and some gaps but near zero in the high N soils of mature forest. Our findings suggest that canopy legumes closely regulate N₂ fixation, leading to large variations in N inputs across the landscape, and low symbiotic fixation in mature forests despite abundant legumes.     

Leaf litter inputs reinforce islands of nitrogen fertility in a lowland tropical forest

The role of lowland tropical forest tree communities in shaping soil nutrient cycling has been challenging to elucidate in the face of high species diversity. Previously, we showed that differences in tree species composition and canopy foliar nitrogen (N) concentrations correlated with differences in soil N availability in a mature Costa Rican rainforest. Here, we investigate potential mechanisms explaining this correlation. We used imaging spectroscopy to identify study plots containing 10–20 canopy trees with either high or low mean canopy N relative to the landscape mean. Plots were restricted to an uplifted terrace with relatively uniform parent material and climate. In order to assess whether canopy and soil N could be linked by litterfall inputs, we tracked litter production in the plots and measured rates of litter decay and the carbon and N content of leaf litter and leaf litter leachate. We also compared the abundance of putative N fixing trees and rates of free-living N fixation as well as soil pH, texture, cation exchange capacity, and topographic curvature to assess whether biological N fixation and/or soil properties could account for differences in soil N that were, in turn, imprinted on the canopy. We found no evidence of differences in legume communities, free-living N fixation, or abiotic properties. However, soils beneath high canopy N assemblages received ~ 60% more N via leaf litterfall due to variability in litter N content between plot types. The correlation of N in canopy leaves, leaf litter, and soil suggests that, under similar abiotic conditions, litterfall-mediated feedbacks can help maintain soil N differences among tropical tree assemblages in this diverse tropical forest.

     

Bottom-up rather than top-down processes regulate the abundance and activity of nitrogen fixing plants in two Connecticut old-field ecosystems

The maintenance of nitrogen limitation in terrestrial ecosystems remains a central paradox in biogeochemistry. Although plants that form a symbiotic association with nitrogen fixing bacteria should be at a competitive advantage over non-fixing plant species in N limited environments, N₂ fixing plants are uncommon in most mid- to high-latitude ecosystems. Theory and observation suggest that preferential grazing on N-rich tissues by herbivores, resource limitations to growth, reproduction and N₂ fixation, and temperature limitations to the activity of the N₂ fixing enzyme nitrogenase, explain the rarity of N₂ fixing plants. These ideas, however, have never been confronted by multifactor experiments in the field. In a 3 year field experiment, we found that the abundance, growth, reproductive output and fraction of plant-N derived from N₂ fixation in temperate, old-field ecosystems was constrained by the availability of phosphorus (P). Although the availability of light was crucial to the performance of old-field N₂ fixing plants, the largest gains in biomass and the rate of N₂ fixation were observed in the plots fertilized with P. By contrast, herbivory had no effect on the abundance, biomass and activity of N₂ fixing plants and inconsistent effects on foliar nitrogen concentrations (opposing directions, depending upon year), suggesting that herbivores do not affect the ecology of N₂ fixing plants in old field ecosystems, at least not over the course of 3 years. Together with a recent study demonstrating that C limitation explains the absence of N₂ fixing trees in temperate forests our analysis suggests that stand replacing disturbances shift the limitation on the abundance and activity of N₂ fixing plants from P early in secondary succession to light later in succession, as the forest canopy closes and incident light levels decline precipitously.     

Spatial Scales of Pollen and Seed-Mediated Gene Flow in Tropical Rain Forest Trees

Gene flow via seed and pollen is a primary determinant of genetic and species diversity in plant communities at different spatial scales. This paper reviews studies of gene flow and population genetic structure in tropical rain forest trees and places them in ecological and biogeographic context. Although much pollination is among nearest neighbors, an increasing number of genetic studies report pollination ranging from 0.5–14 km for canopy tree species, resulting in extensive breeding areas in disturbed and undisturbed rain forest. Direct genetic measures of seed dispersal are still rare; however, studies of fine scale spatial genetic structure (SGS) indicate that the bulk of effective seed dispersal occurs at local scales, and we found no difference in SGS (Sp statistic) between temperate (N?=?24 species) and tropical forest trees (N?=?15). Our analysis did find significantly higher genetic differentiation in tropical trees (F _ST?=?0.177; N?=?42) than in temperate forest trees (F _ST?=?0.116; N?=?82). This may be due to the fact that tropical trees experience low but significant rates of self-fertilization and bi-parental inbreeding, whereas half of the temperate tree species in our survey are wind pollinated and are more strictly allogamous. Genetic drift may also be more pronounced in tropical trees due to the low population densities of most species.     

Phosphatase activity and nitrogen fixation reflect species differences,not nutrient trading or nutrient balance,across tropical rainforest trees

A fundamental biogeochemical paradox is that nitrogen‐rich tropical forests contain abundant nitrogen‐fixing trees, which support a globally significant tropical carbon sink. One explanation for this pattern holds that nitrogen‐fixing trees can overcome phosphorus limitation in tropical forests by synthesizing phosphatase enzymes to acquire soil organic phosphorus, but empirical evidence remains scarce. We evaluated whether nitrogen fixation and phosphatase activity are linked across 97 trees from seven species, and tested two hypotheses for explaining investment in nutrient strategies: trading nitrogen‐for‐phosphorus or balancing nutrient demand. Both strategies varied across species but were not explained by nitrogen‐for‐phosphorus trading or nutrient balance. This indicates that (1) studies of these nutrient strategies require broad sampling within and across species, (2) factors other than nutrient trading must be invoked to resolve the paradox of tropical nitrogen fixation, and (3) nitrogen‐fixing trees cannot provide a positive nitrogen‐phosphorus‐carbon feedback to alleviate nutrient limitation of the tropical carbon sink.     

Effect of N-fixing and non N-fixing trees and crops on NO and N2O emissions from Senegalese soils

Aim Agroforestry systems incorporating N‐fixing trees have been shown to be socially beneficial and are thought to be environmentally friendly, both enriching and stabilizing soil. However, the effect of such systems on the emissions of the important greenhouse gas nitrous oxide (N₂O) and the tropospheric ozone precursor nitric oxide (NO) is largely unknown. Location Soil was collected from the research plots of Institut Sénégalais de Recherches Agricoles at Bandia and Bambey, Senegal, West Africa, and from neighbouring farmers’ fields. Trace gas flux measurements and chemical analysis of the soil were carried out at the Centre for Ecology and Hydrology (CEH), Edinburgh, UK. Methods Nitric oxide (NO) and nitrous oxide (N₂O) emissions were measured following simulated rainfall events (10 and 20 mm equivalents) from repacked soil cores collected under two tree species (Acacia raddiana) and Eucalyptus camaldulensis) in each of two provenance trails. In addition, soil samples were collected in local fields growing peanut (Arachis hypogaea) and Sorghum (Sorghum vulgare), close to the species trials in Bambey. NO was measured using a flow through system and was analysed by chemiluminescence. Nitrous oxide was measured from the repacked soil core headspace and was analysed by electron capture gas chromatography. Soil mineral N was extracted with KCl and analysed by colorimetric methods on separate soil columns. Results Light rainfall, which increased the gravimetric soil moisture content to 20%, stimulated an increase in NO emission but there was no detectable N₂O emission. A heavy rainfall event, which increased the gravimetric soil moisture to 30%, stimulated N₂O emission with a subsequent peak in NO emissions when the soils became drier. Soil collected under the N‐fixing tree species emitted significantly more N₂O than soil collected under the N‐fixing crop species (P < 0.01). NO and N₂O emissions significantly correlated with soil available N (NH₄ and NO₃) (P < 0.05). Main conclusions Rainfall intensity, supply of mineral N from organic matter and N fixation were the prime drivers of NO and N₂O emissions from seasonally dry tropical soils. The improved soil fertility underneath the trees provided a larger pool of mineral N and yielded larger rates of NO and N₂O emissions.     

Nitrogen‐fixing tree abundance in higher‐latitude North America is not constrained by diversity

The rarity of nitrogen (N)‐fixing trees in frequently N‐limited higher‐latitude (here, > 35°) forests is a central biogeochemical paradox. One hypothesis for their rarity is that evolutionary constraints limit N‐fixing tree diversity, preventing N‐fixing species from filling available niches in higher‐latitude forests. Here, we test this hypothesis using data from the USA and Mexico. N‐fixing trees comprise only a slightly smaller fraction of taxa at higher vs. lower latitudes (8% vs. 11% of genera), despite 11‐fold lower abundance (1.2% vs. 12.7% of basal area). Furthermore, N‐fixing trees are abundant but belong to few species on tropical islands, suggesting that low absolute diversity does not limit their abundance. Rhizobial taxa dominate N‐fixing tree richness at lower latitudes, whereas actinorhizal species do at higher latitudes. Our results suggest that low diversity does not explain N‐fixing trees' rarity in higher‐latitude forests. Therefore, N limitation in higher‐latitude forests likely results from ecological constraints on N fixation.     

Increases of Soil C, N, and P Pools Along an Acacia Tree Density Gradient and Their Effects on Trees and Grasses

Nitrogen (N) fixing trees including many species of Acacia are an important though variable component of savanna ecosystems. It is known that these trees enrich the soil with carbon (C) and N, but their effect on the combined C:N:P stoichiometry in soil is less well understood. Theory suggests that they might reduce available phosphorus (P), creating a shift from more N-limited conditions in grass-dominated to more P-limited conditions in tree-dominated sites, which in turn could feed back negatively on the trees’ capacity to fix N. We studied the effects of Acacia zanzibarica tree density upon soil and foliar N:P stoichiometry, and the N₂-fixation rates of trees and leguminous herbs in a humid Tanzanian savanna. Foliar N:P ratios and N₂-fixation rates of trees remained constant across the density gradient, whereas soil C, N and organic P pools increased. In contrast, the N:P ratio of grasses increased and N₂-fixation rates of leguminous herbs decreased with increasing tree density, indicating a shift towards more P-limited conditions for the understory vegetation. These contrasting responses suggest that trees and grasses have access to different sources of N and P, with trees being able to access P from deeper soil layers and perhaps also utilizing organic forms more efficiently.     

Metal limitation of cyanobacterial N2 fixation and implications for the Precambrian nitrogen cycle

Nitrogen fixation is a critical part of the global nitrogen cycle, replacing biologically available reduced nitrogen lost by denitrification. The redox‐sensitive trace metals Fe and Mo are key components of the primary nitrogenase enzyme used by cyanobacteria (and other prokaryotes) to fix atmospheric N₂ into bioessential compounds. Progressive oxygenation of the Earth's atmosphere has forced changes in the redox state of the oceans through geologic time, from anoxic Fe‐enriched waters in the Archean to partially sulfidic deep waters by the mid‐Proterozoic. This development of ocean redox chemistry during the Precambrian led to fluctuations in Fe and Mo availability that could have significantly impacted the ability of prokaryotes to fix nitrogen. It has been suggested that metal limitation of nitrogen fixation and nitrate assimilation, along with increased rates of denitrification, could have resulted in globally reduced rates of primary production and nitrogen‐starved oceans through much of the Proterozoic. To test the first part of this hypothesis, we grew N₂‐fixing cyanobacteria in cultures with metal concentrations reflecting an anoxic Archean ocean (high Fe, low Mo), a sulfidic Proterozoic ocean (low Fe, moderate Mo), and an oxic Phanerozoic ocean (low Fe, high Mo). We measured low rates of cellular N₂ fixation under [Fe] and [Mo] estimated for the Archean ocean. With decreased [Fe] and higher [Mo] representing sulfidic Proterozoic conditions, N₂ fixation, growth, and biomass C:N were similar to those observed with metal concentrations of the fully oxygenated oceans that likely developed in the Phanerozoic. Our results raise the possibility that an initial rise in atmospheric oxygen could actually have enhanced nitrogen fixation rates to near modern marine levels, providing that phosphate was available and rising O₂ levels did not markedly inhibit nitrogenase activity.     

Influence of pruning management on P and N distribution and use efficiency by N2 fixing and non-N2 fixing trees used in alley cropping systems

Pruning of hedgerow trees is an important management practice for the successful establishment of an alley cropping system. Although pruning affects biomass production, only meager evidence of this management on distribution of nutrients among the different plant organs after tree regrowth is available. This study examined the effect of pruning on the distribution and use efficiency of N and P in a N₂ fixing leguminous tree species, Gliricidia sepium, and two non-N₂ fixing leguminous tree species, Senna siamea and S. spectabilis, grown in a field on an Alfisol (low in P) at Fashola (Guinea Savanna Zone), Southwestern Nigeria. Four P rates, 0, 20, 40 and 80 kg P ha^–1 as single superphosphate were used and management treatments included pruned versus unpruned plants. The ¹⁵N isotope dilution technique was used to measure N₂ fixation in G. sepium. Partitioning of total P among different plant organs was influenced by plant species and pruning management, but was not affected by P application rates. The distribution of total P in the various plant organs followed that of dry matter yield while N partitioning had a different pattern. Pruned plants distributed about 118% more total P to branches and had a higher physiological P use efficiency (PPUE) than unpruned plants. Leaves were the biggest sink for total N and N allocation in the other plant organs was influenced by plant species and pruning management, G. sepium had relatively more of its total N and P partitioned into roots (about double that of the non-N₂ fixing trees) but had a lower PPUE. Unpruned and pruned G. sepium derived 35 and 54% respectively of their total N from atmospheric N2, with about 54% of the fixed N2 being allocated to leaves and roots. Results showed that N and P pools turned over in the branches during plant regrowth after pruning but the causative factors associated with this phenomenon were not clear.     

Interactions among nitrogen fixation and soil phosphorus acquisition strategies in lowland tropical rain forests

Paradoxically, symbiotic dinitrogen (N₂) fixers are abundant in nitrogen (N)‐rich, phosphorus (P)‐poor lowland tropical rain forests. One hypothesis to explain this pattern states that N₂ fixers have an advantage in acquiring soil P by producing more N‐rich enzymes (phosphatases) that mineralise organic P than non‐N₂ fixers. We assessed soil and root phosphatase activity between fixers and non‐fixers in two lowland tropical rain forest sites, but also addressed the hypothesis that arbuscular mycorrhizal (AM) colonisation (another P acquisition strategy) is greater on fixers than non‐fixers. Root phosphatase activity and AM colonisation were higher for fixers than non‐fixers, and strong correlations between AM colonisation and N₂ fixation at both sites suggest that the N–P interactions mediated by fixers may generally apply across tropical forests. We suggest that phosphatase enzymes and AM fungi enhance the capacity of N₂ fixers to acquire soil P, thus contributing to their high abundance in tropical forests.     

Floristic composition and structure of vegetation under isolated trees in neotropical pastures

Abstract. Large isolated trees are a common feature of the agricultural landscape in humid tropical regions originally covered by rain forest. These isolated trees are primarily used as a source of shade for cattle and people. 13 pastures (totalling ca. 80 ha) currently used as cattle pasture were studied. In them, we registered 265 isolated trees belonging to 57 species. 50 trees of the most frequent species (Ficus spp. n = 30 and Nectandra ambigens n = 20) were selected to examine the influence of isolated trees on floristic composition and vegetation structure in the pastures. At each tree, three 4–m² quadrats were sampled: under the canopy, directly under the canopy perimeter, and beyond the canopy in the open pasture. Under-canopy vegetation was structurally and floristically different from the other two sampling sites. Mean species richness per quadrat was significantly higher under the canopy (17.8 ± 4.3 SD) than at the canopy perimeter (11.2 ± 3.4) and in the open pasture (10.6 ± 3.6) sites. Stem density was higher at under-canopy sites, where greater proportions of endozoochorous and rain-forest species were found. Isolated trees function as nursery plants for rain-forest species by facilitating the establishment of zoochorous species whose seeds are deposited under the tree canopies by frugivorous birds or bats. Our results imply that isolated trees may play a major role in seed dispersal and establishment of native species, which is of consequence for the preservation of rain-forest species in these fragmented landscapes.     

Age and Long-term Growth of Trees in an Old-growth Tropical Rain Forest, Based on Analyses of Tree Rings and 14C1

In an old‐growth tropical wet forest at La Selva, Costa Rica, we combined radiocarbon (¹⁴C) dating and tree‐ring analysis to estimate the ages of large trees of canopy and emergent species spanning a broad range of wood densities and growth rates. We collected samples from the trunks of 29 fallen, dead individuals. We found that all eight sampled species formed visible growth rings, which varied considerably in distinctiveness. For five of the six species for which we combined wood anatomical studies with ¹⁴C‐dates (ring ages), the analyses demonstrated that growth rings were of annual formation. The oldest tree we found by direct ring counting was a Hymenolobium mesoamericanum Lima (Papilionaceae) specimen, with an age of ca. 530 years at the time of death. All other sampled individuals, including very large trees of slow‐growing species, had died at ages between 200 and 300 years. These results show that, even in an everwet tropical rain forest, tree growth of many species can be rhythmic, with an annual periodicity. This study thus raises the possibility of extending tree‐ring analyses throughout the tropical forest types lacking a strong dry season or annual flooding. Our findings and similar measurements from other tropical forests indicate that the maximum ages of tropical emergent trees are unlikely to be much greater than 600 years, and that these trees often die earlier from various natural causes.     

A stoichiometric perspective of the effect of herbivore dung on ecosystem functioning

Ungulate herbivores play a prominent role in maintaining the tree–grass balance in African savannas. Their top‐down role through selective feeding on either trees or grasses is well studied, but their bottom‐up role through deposition of nutrients in dung and urine has been overlooked. Here, we propose a novel concept of savanna ecosystem functioning in which the balance between trees and grasses is maintained through stoichiometric differences in dung of herbivores that feed on them. We describe a framework in which N₂‐fixing trees and grasses, as well as ungulate browsing and grazing herbivores, occupy opposite positions in an interconnected cycle of processes. The framework makes the testable assumption that the differences in dung N:P ratio among browsers and grazers are large enough to influence competitive interactions between N₂‐fixing trees and grasses. Other key elements of our concept are supported with field data from a Kenyan savanna.     

Dominance of legume trees alters nutrient relations in mixed species forest restoration plantings within seven years

Failures in reforestation are often attributed to nutrient limitation for tree growth. We compared tree performance and nitrogen and phosphorus relations in adjacent mixed-species plantings of contrasting composition, established for forest restoration on Ultisol soil, originally covered by tropical semi-deciduous Atlantic Forest in Southeast Brazil. Nutrient relations of four tree species occurring in both planting mixtures were compared between a legume-dominated, species-poor direct seeding mixture of early-successional species (“legume mixture”), and a species-diverse, legume-poor mixture of all successional groups (“diverse mixture”). After 7 years, the legume mixture had 6-fold higher abundance of N₂-fixing trees, 177% higher total tree basal area, 22% lower litter C/N, six-fold higher in situ soil resin-nitrate, and 40% lower in situ soil resin-P, compared to the diverse mixture. In the legume mixture, non-N₂-fixing legume Schizolobium parahyba (Fabaceae-Caesalpinioideae) had significantly lower proportional N resorption, and both naturally regenerating non-legume trees had significantly higher leaf N concentrations, and higher proportional P resorption, than in the diverse mixture. This demonstrate forms of plastic adjustment in all three non-N₂-fixing species to diverged nutrient relations between mixtures. By contrast, leaf nutrient relations in N₂-fixing Enterolobium contortisiliquum (Fabaceae-Mimosoideae) did not respond to planting mixtures. Rapid N accumulation in the legume mixture caused excess soil nitrification over nitrate immobilization and tighter P recycling compared with the diverse mixture. The legume mixture succeeded in accelerating tree growth and canopy closure, but may imply periods of N losses and possibly P limitation. Incorporation of species with efficient nitrate uptake and P mobilization from resistant soil pools offers potential to optimize these tradeoffs.     

Density‐dependent pre‐dispersal seed predation and fruit set in a tropical tree

Negative density‐dependent demographic processes operating at post‐dispersal seed, seedling, and juvenile stages are the dominant explanation for the coexistence of high numbers of tree species in tropical forests. At adult stages, the effect of pollinators and pre‐dispersal fruit predators are often dependent on the density or abundance of flowers and fruit in the canopy, but each have opposite effects on individual realized reproduction. We studied the effect of density on total and mature fruit set and pre‐dispersal predation rates within individual tree canopies in a common canopy tree species, Jacaranda copaia in a 50‐ha forest census plot in central Panama. We sampled all reproductive sized trees in the plot (n = 188) across three years and estimated fruit set and predation rates. Population‐wide pre‐dispersal seed predation averaged between 6–37% across years. Using linear mixed effects models, we found that increased density and fecundity of conspecific neighbours increased focal tree fruit set, but also the rate of pre‐dispersal predation. An interaction between individual and neighbourhood fruit production predicted lower predation rates at high individual and neighbourhood fecundities, which suggests predator satiation at high fruit abundance levels. However, the rate at which fruit set increased with conspecific neighbour fruit production was greater than the rate at which fruit were lost to predation, resulting in an overall positive effect of neighbour density on mature fruit production in focal trees. Our results run counter to the expectation of a uniformly negative effect of density across all life stages in tropical trees and suggest further exploration of the role of spatial clumping, pollen dispersal limitation, and predation at pre‐dispersal adult stages in maintenance of species diversity in plant communities.     

At what spatial scales does resource selection vary? A case study of koalas in a semi‐arid region

The conservation of any species requires understanding and predicting the distribution of its habitat and resource use, including the effects of scale‐dependent variation in habitat and resource quality. Consequently, testing for resource selection at the appropriate scales is critical. We investigated how the resource selection process varies across scales, using koalas in a semi‐arid landscape of eastern Australia as a case study. We asked: at what scales does tree selection by koalas vary across regions? We tested the importance of the variation of our ecological predictors at the following scales: (i) the site‐scale (a stand of trees representing an individual koala's perception of local habitat); (ii) the landscape‐scale (10 × 10 km area representing a space within which a population of koalas exists); and (iii) a combination of these scales. We used a mixed‐modelling approach to quantify variation in selection of individual trees by koalas among sites and landscapes within a 1600 km² study area. We found that tree species, and tree height, were the most important factors influencing tree selection, and that their effect did not vary across scales. In contrast, preferences for trees of different condition, which is the state of tree canopy health, did vary across landscapes, indicating spatial variation in the selection of trees with respect to tree condition at the landscape‐scale, but not at the site‐scale. We conclude that resource selection processes can depend on the quality of those resources at different scales and their heterogeneous nature across landscapes, highlighting the consequence of scale‐dependent ecological processes. Designing studies that capture the heterogeneity in habitat and resources used by species that have an extensive distribution is an important prerequisite for effective conservation planning and management.     

Contrasting demographics of tropical savanna and temperate forest eucalypts provide insight into how savannas and forests function. A case study using Corymbia clarksoniana from north‐eastern Australia

Eucalypts (Eucalyptus spp. and Corymbia spp.) dominate many communities across Australia, including frequently burnt tropical savannas and temperate forests, which receive less frequent but more intense fires. Understanding the demographic characteristics that allow related trees to persist in tropical savannas and temperate forest ecosystems can provide insight into how savannas and forests function, including grass–tree coexistence. This study reviews differences in critical stages in the life cycle of savanna and temperate forest eucalypts, especially in relation to fire. It adds to the limited data on tropical eucalypts, by evaluating the effect of fire regimes on the population biology of Corymbia clarksoniana, a tree that dominates some tropical savannas of north‐eastern Australia. Corymbia clarksoniana displays similar demographic characteristics to other tropical savanna species, except that seedling emergence is enhanced when seed falls onto recently burnt ground during a high rainfall period. In contrast to many temperate forest eucalypts, tropical savanna eucalypts lack canopy‐stored seed banks; time annual seed fall to coincide with the onset of predictable wet season rain; have very rare seedling emergence events, including a lack of mass germination after each fire; possess an abundant sapling bank; and every tropical eucalypt species has the ability to maintain canopy structure by epicormically resprouting after all but the most intense fires. The combination of poor seedling recruitment strategies, coupled with characteristics allowing long‐term persistence of established plants, indicate tropical savanna eucalypts function through the persistence niche rather than the regeneration niche. The high rainfall‐promoted seedling emergence of C. clarksoniana and the reduction of seedling survival and sapling growth by fire, support the predictions that grass–tree coexistence in savannas is governed by rainfall limiting tree seedling recruitment and regular fires limiting the growth of juvenile trees to the canopy.     

Molybdenum isotope fractionation by cyanobacterial assimilation during nitrate utilization and N₂ fixation

We measured the δ⁹⁸Mo of cells and media from molybdenum (Mo) assimilation experiments with the freshwater cyanobacterium Anabaena variabilis, grown with nitrate as a nitrogen (N) source or fixing atmospheric N₂. This organism uses a Mo‐based nitrate reductase during nitrate utilization and a Mo‐based dinitrogenase during N₂ fixation under culture conditions here. We also demonstrate that it has a high‐affinity Mo uptake system (ModABC) similar to other cyanobacteria, including marine N₂‐fixing strains. Anabaena variabilis preferentially assimilated light isotopes of Mo in all experiments, resulting in fractionations of ?0.2‰ to ?1.0‰ ± 0.2‰ between cells and media (ε_{cells–media}), extending the range of biological Mo fractionations previously reported. The fractionations were internally consistent within experiments, but varied with the N source utilized and for different growth phases sampled. During growth on nitrate, A. variabilis consistently produced fractionations of ?0.3 ± 0.1‰ (mean ± standard deviation between experiments). When fixing N₂, A. variabilis produced fractionations of ?0.9 ± 0.1‰ during exponential growth, and ?0.5 ± 0.1‰ during stationary phase. This pattern is inconsistent with a simple kinetic isotope effect associated with Mo transport, because Mo is likely transported through the ModABC uptake system under all conditions studied. We present a reaction network model for Mo isotope fractionation that demonstrates how Mo transport and storage, coordination changes during enzymatic incorporation, and the distribution of Mo inside the cell could all contribute to the total biological fractionations. Additionally, we discuss the potential importance of biologically incorporated Mo to organic matter‐bound Mo in marine sediments.     

Effect of initial soil properties on six‐year growth of 15 tree species in tropical restoration plantings

In restoration plantings in degraded pastures, initial soil nutrient status may lead to differential growth of tropical tree species with diverse life history attributes and capacity for N₂ fixation. In 2006, we planted 1,440 seedlings of 15 native tree species in 16 fenced plots (30 × 30 m) in a 60‐year‐old pasture in Los Tuxtlas, Veracruz, Mexico, in two planting combinations. In the first year, we evaluated bulk density, pH, the concentration of organic carbon (C), total nitrogen (N), ammonia (), nitrate (), and total phosphorus (P) in the upper soil profile (0–20 cm in depth) of all plots. The first two axes of two principal component analyses explained more than 60% of the variation in soil variables: The axes were related to increasing bulk density, , , total N concentration, and pH. Average relative growth rates in diameter at the stem base of the juvenile trees after 6 years were higher for pioneer (45.7%) and N₂‐fixing species (47.6%) than for nonpioneer (34.7%) and nonfixing species (36.2%). Most N₂‐fixing species and those with the slowest growth rates did not respond to soil attributes. Tree species benefited from higher pH levels and existing litter biomass. The pioneers Ficus yoponensis, Cecropia obtusifolia, and Heliocarpus appendiculatus, and the N₂‐fixing nonpioneers Cojoba arborea, Inga sinacae, and Platymiscium dimorphandrum were promising for forest restoration on our site, given their high growth rates.