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1.
Tibor Er&#x;s Balzs Tth Andrs Sevcsik Dnes Schmera 《International Review of Hydrobiology》2008,93(1):88-105
We studied day‐night patterns in fish diversity in natural, gravel‐sand stretches and boulder covered rip‐rap habitats in the littoral zone of the River Danube. Sample‐based rarefaction indicated marked differences in species richness between day and night, and smaller differences between habitats for both day and night. Whereas, individual‐based rarefaction indicated no such substantial differences in species richness. However, distinct fish assemblages were found based on relative abundance data, and species of great conservation concern tended to link to natural habitats. The diversity of biological traits/attributes were generally higher in rip‐rap habitats. The differences in fish assemblage characteristics between habitats revealed the importance of gravel‐sand habitats in maintaining natural assemblages and that rip‐rap sections increase compositional beta diversity at the mesohabitat scale. (© 2008 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim) 相似文献
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STEVEN M. HOLLAND 《Palaeontology》2010,53(6):1237-1254
Abstract: Using Whittaker’s concepts of alpha, beta, and gamma diversity, Sepkoski asked how global diversity was assembled at scales ranging from the community to the province. In the years since, ecologists have recast diversity in terms of additive partitions where total diversity can be decomposed into sample‐level alpha diversity plus the sum of a series of beta diversity terms that reflect progressively larger spatial scales. Given that marine alpha diversity represents a tiny fraction of global diversity, Phanerozoic global diversity patterns must be dominated by changes in beta diversity at one or more scales. A ballooning ecological literature demonstrates wide variation in beta diversity among ecosystems, regions, and taxa, suggesting that large changes in beta diversity on evolutionary timescales are likely. But the question is which scales are the most important. Several recent palaeontological studies help to constrain beta diversity within sedimentary basins, and the emergence of sample‐based databases puts an answer to Sepkoski’s question within reach. A new method for calculating diversity partitions for richness is introduced, which allows the calculation of each species’ contribution to alpha and beta diversity, as well as the contribution of each sampling unit to beta diversity. 相似文献
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Robert Poulin 《Journal of Biogeography》2001,28(6):737-743
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Documenting the effects of novel forms of enrichment is becoming increasingly important within the field of environmental enrichment. Appropriate documentation and evaluation must accompany any enrichment research project in order for accurate results to be obtained. The objective of the present study was to provide an example of how the level of effort in documenting the effect of enrichment is linked to how it is evaluated. This study was carried out on eight cheetahs (Acinonyx jubatus) at Fota Wildlife Park, Ireland. Temporal feeding variation was the enrichment type used during this study. Behavior data were collected in five different ways in order to simulate varying degrees of effort. Randomization tests were utilized to analyze behavior data. Significant behavioral differences were observed in the first four sampling methods with patterns of behavior remaining similar in all five methods. However, only the most time intensive method concurred with findings previously published utilizing this form of enrichment. No significant differences in behavior were detected when the least time intensive method was used. Between 1 and 2 hr of data collection daily is necessary to evaluate temporal feeding variation accurately. However, 30–45 min of data collection also gave an insight into the effectiveness of the enrichment. Methods of evaluation can influence the interpretations of the strength of the enriching effect of the treatment. Appropriate evaluation and accurate reporting of enrichment is crucial for the future development of the environmental enrichment field. Zoo Biol 32:262–268, 2013. © 2012 Wiley Periodicals, Inc. 相似文献
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Tamara Rodríguez‐Ramos Emilio Marañón Pedro Cermeño 《Global Ecology and Biogeography》2015,24(5):527-538
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Nicolas Gaidet Hervé Fritz Samir Messad Snoden Mutake Sébastien Le Bel 《African Journal of Ecology》2005,43(1):56-63
With a growing need for wildlife conservation and management in the communal lands of Africa, comprehensive ecological monitoring tools need to be developed and evaluated. While wildlife census methods are often compared in terms of precision and accuracy to estimate the population size of various target species, little attention has been paid to the measure of species diversity in mammal communities. A combined measure of abundance and community composition is, however, a crucial source of information in determining conservation priorities and to evaluate the ecosystem responses to management activities. In this study, we present five census methods of large to medium‐sized mammals and compare their efficacy in measuring species diversity. A species accumulation curve analysis is used with a predictive model to estimate the local species richness, the level of completeness of our censuses as well as the effort required to carry out a census. Advantages and limits of each method are discussed through comparison of their respective measure of species richness and their species accumulation rate. Results illustrate a large difference between methods in the ability for species detection, with censuses completed by bicycle offering the best option within the context of a unprotected area. 相似文献
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Community evenness has recently received much attention, either because it is related to ecosystem functioning or because it may affect estimation of diversity. Temporal and environmental trends in diversity and evenness of trilobite communities during the Late Cambrian – Early Ordovician of the Cordillera Oriental (north‐western Argentina) are here analysed. Richness and evenness increase through time in both deep subtidal (between fair‐weather and storm wave base) and offshore (below storm wave base) communities. Two significant patterns are superimposed on this general trend: (1) the magnitude of the increase in evenness is much more pronounced in deep than in shallower settings, and (2) richness and evenness trajectories are decoupled (while a significant rise in evenness is recorded in the middle Tremadocian (Tr2), an increase in richness is delayed until the late Tremadocian (Tr3)). In contrast to expectations, a single family (Olenidae) is dominant in samples associated with this earlier rise in evenness relative to richness. Hence, this trend is explained neither by the number of families present in the communities nor by the familial identity of the most abundant taxon. Large‐scale comparisons of the timing and geographical components of these trends are restricted to the patterns recognized in Laurentian North American studies. Results from the Cordillera Oriental mirror those of Laurentia regarding the rise in both metrics in deep marine settings. Nevertheless, the timing of this increase in richness and evenness is delayed in the Cordillera Oriental, supporting the idea that palaeogeographical regions differed in the nature and timing of ecological changes. Finally, the rise in trilobite alpha‐diversity through the Late Cambrian – Early Ordovician of the Cordillera Oriental supports the idea that trilobite alpha‐diversity did not decline worldwide, suggesting that the relative decline in trilobite alpha‐diversity is most probably caused by the dilution effect. 相似文献
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Jonathan S. Mitchell Peter J. Makovicky 《Proceedings. Biological sciences / The Royal Society》2014,281(1787)
Ecological divergence is thought to be coupled with evolutionary radiations, yet the strength of this coupling is unclear. When birds diversified ecologically has received much less attention than their hotly debated crown divergence time. Here, we quantify how accurately skeletal morphology can predict ecology in living and extinct birds, and show that the earliest known assemblage of birds (= pygostylians) from the Jehol Biota (≈ 125 Ma) was substantially impoverished ecologically. The Jehol avifauna has few representatives of highly preservable ecomorphs (e.g. aquatic forms) and a notable lack of ecomorphological overlap with the pterosaur assemblage (e.g. no large or aerially foraging pygostylians). Comparisons of the Jehol functional diversity with modern and subfossil avian assemblages show that taphonomic bias alone cannot explain the ecomorphological impoverishment. However, evolutionary simulations suggest that the constrained ecological diversity of the Early Cretaceous pygostylians is consistent with what is expected from a relatively young radiation. Regardless of the proximate biological explanation, the anomalously low functional diversity of the Jehol birds is evidence both for ecological vacancies in Cretaceous ecosystems, which were subsequently filled by the radiation of crown Aves, and for discordance between taxonomic richness and ecological diversity in the best-known Mesozoic ecosystem. 相似文献
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- To assess species diversity efficiently and adequately, it is important to understand how species diversity assessments are affected by sampling effort and methodology.
- We evaluated methods for sampling bees and wasps on clear‐cuts in managed boreal forest landscapes to assess the effects of trap type, sampling effort and time within season on observed species diversity.
- We found that pan traps and window traps captured similar numbers of species, whereas a much lower number was captured by trap‐nests.
- The efficiency of the trap types varied between species groups, with pollen‐collecting bees being most effectively sampled by pan traps and dead wood‐nesting bees and wasps by window traps.
- Species turnover over time was moderate, and consequently the sampling period could be reduced to 5–6 weeks in boreal forests and similar habitat types without a major decrease in the number of species collected.
- We recommend using window traps for bees and wasps in forest habitats. Combining trap types is recommended if the aim is to collect broad species assemblages, while single types are most useful for the efficient collection of specific species groups.
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Robert Poulin 《Biology letters》2011,7(2):241-244
Cryptic species cause problems for estimates of biodiversity. In the case of parasites, cryptic species also plague efforts to detect potential zoonotic diseases or invasive pathogens. It is crucial to determine whether the likelihood of finding cryptic species differs among higher parasite taxa, to better calibrate estimates of diversity and monitor diseases. Using published reports of cryptic species of helminth parasites identified using molecular tools, I show that the number of species found is strongly related to the number of parasite individuals sequenced, weakly influenced by the number of host species from which parasites were obtained, and unaffected by the genetic markers used. After correction for these factors, more cryptic species of trematodes are found than in other helminth taxa. Although several features distinguish trematodes from other helminths, it is probable that our inability to discriminate among sibling species of trematodes results from their lack of structures serving as species-specific morphological markers. The available data suggest that current estimates of helminth diversity may need to be doubled (tripled for trematodes) to better reflect extant diversity. 相似文献
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物种丰富度分布格局及其形成机制的研究对于生物多样性保护具有重要意义。为了了解中国蚂蚁物种丰富度分布格局,利用中国省级尺度蚂蚁物种分布数据和环境信息,结合GIS和数理统计方法,探讨蚂蚁物种丰富度的地理分布格局与环境因子之间的关系。研究结果表明:(1)蚂蚁丰富度随纬度增加呈逐渐递减趋势,但缺乏显著的经度梯度。丰富度最高的地区主要集中在南方省份,我国北方、西北干旱区和青藏高原北部地区丰富度较低;(2)简单线性回归分析表明,能量、水分和季节性因素中,影响蚂蚁物种丰富度最强的因子分别为最冷月均温(TEMmin)(R2adj=0.532)、年均降水量(PREC)(R2adj=0.376)和年温度变化范围(TEMvar)(R2adj=0.539),而单个生境异质性因子对蚂蚁物种丰富度的影响均不显著;(3)最优模型由年均温(TEM)、海拔变化范围(ELErange)和年温度变化范围(TEMvar)组成,能够解释68.4%的蚂蚁丰富度地理分异。鉴于海拔变化范围更多地反映与温度相关的生境异质性,因此温度是限制中国蚂蚁分布的最重要因素。另外,分析结果还表明,海南、贵州、江西、四川、安徽和山西等6省蚂蚁区系调查最不充分,是未来发现蚂蚁新分布的热点地区。 相似文献
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Imelda M. Hausmann Alexander Nützel 《Lethaia: An International Journal of Palaeontology and Stratigraphy》2015,48(2):235-255
A sample of marine invertebrates from the Late Triassic Cassian Formation (north Italy) yielded one of the most diverse Early Mesozoic fossil assemblages ever reported (c. 170 species). The assemblage was found in basin clays, but was transported from nearby carbonate platforms as indicated by fragmentation, microbial encrustation and the presence of coated grains and ooids. Most of the specimens are small (< 1 cm) reflecting both, small adult sizes and size sorting during transport. Rarefaction analysis suggests that diversity of surface collection and bulk sampling is the same. However, rank abundance, species richness and taxonomic composition differ strongly according to sampling method. Low‐grade lithification of the sediments is the main reason that high diversity can be recognized, because it facilitates disaggregation and finding of small molluscs. Sample standardization shows that the studied assemblage is much more diverse than known Early Triassic assemblages. However, its diversity is similar to that of Anisian assemblages. This suggests that recovery from the end‐Permian mass‐extinction was quite advanced in the Middle Triassic and alpha‐diversity remained high until the Late Triassic. According to current models, Early Triassic and Anisian faunas match the niche overlap phase of recovery during which diversity is built up by increasing alpha‐diversity, whereas beta‐diversity rises slowly. Subsequently, habitat width of species contracts because of increasing competition, making beta‐diversity the principal drive of overall diversity increase. The diversity pattern of various Late Triassic Cassian associations meets the predictions for the transition from the niche overlap to the habitat contraction phase.: Triassic, Cassian Formation, palaeoecology, diversity, mollusc dominance. 相似文献
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Andrew B. Smith 《Palaeontology》2004,47(1):123-150
Holasteroids are a major clade of irregular echinoids that today is confined to the deep-sea, but which has a rich fossil record extending back to the start of the Cretaceous Period. A cladistic analysis of this clade, encompassing the great majority of living and fossil genera, is undertaken based on new data on test architecture. The classification of the group is reviewed and a new hierarchical scheme is proposed. The highly atypical apical disc structure of pourtalesiid holasteroids is discussed and critical data for understanding its plate homologies are provided by the most primitive pourtalesiid, the Late Cretaceous Galeaster . This supports the idea that plates previously identified as posterior genital plates in pourtalesiids are in fact ocular plates II and IV. An evolutionary tree for holasteroids is constructed by calibrating the cladogram against the stratigraphic record. This is then used to examine how holasteroid diversity and ecology have changed through time. Holasteroids have migrated into the deep-sea at least four times independently. Three of these lineages can be traced back to sister taxa living in deep-water continental shelf environments in the Late Cretaceous–early Tertiary, while a fourth represents a very much younger migration event, possibly Late Miocene in age. 相似文献
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Estimating animal abundances in small areas is a difficult task and because a limited number of observations often results in low-precision estimates whose inaccuracies may even be exacerbated if surveys are focussed on clustered populations and/or are only carried out once a year. In an attempt to overcome this problem, we used point transects to monthly survey two small areas of a game reserve to assess the density of Pyrenean chamois (Rupicapra p. pyrenaica). The coefficient of variation associated with the density estimates after pooling observations by season was still high but decreased to reasonable values (<20%) when observations were over 29 chamois groups (clusters). Our results suggest that Distance Sampling may be a useful way of estimating the population density of mountain ungulates such as Pyrenean chamois in small rugged areas where only a small or moderate number of observations are to be expected. 相似文献
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Kristine Engemann Brian J. Enquist Brody Sandel Brad Boyle Peter M. Jørgensen Naia Morueta‐Holme Robert K. Peet Cyrille Violle Jens‐Christian Svenning 《Ecology and evolution》2015,5(3):807-820
Macro‐scale species richness studies often use museum specimens as their main source of information. However, such datasets are often strongly biased due to variation in sampling effort in space and time. These biases may strongly affect diversity estimates and may, thereby, obstruct solid inference on the underlying diversity drivers, as well as mislead conservation prioritization. In recent years, this has resulted in an increased focus on developing methods to correct for sampling bias. In this study, we use sample‐size‐correcting methods to examine patterns of tropical plant diversity in Ecuador, one of the most species‐rich and climatically heterogeneous biodiversity hotspots. Species richness estimates were calculated based on 205,735 georeferenced specimens of 15,788 species using the Margalef diversity index, the Chao estimator, the second‐order Jackknife and Bootstrapping resampling methods, and Hill numbers and rarefaction. Species richness was heavily correlated with sampling effort, and only rarefaction was able to remove this effect, and we recommend this method for estimation of species richness with “big data” collections. 相似文献
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Maria Julia Muzetti Butolo Crasso Paulo Bosco Breviglieri Fernando Rodrigues da Silva 《Austral ecology》2023,48(6):1083-1091
Here we assessed the efficacy of performing field surveys during both dry and rainy seasons to estimate species richness and composition of phyllostomid bats in 12 sites of the Brazilian Atlantic Forest. Our goal was to elucidate two opposite scenarios. If bat species compositions differ between the dry and rainy seasons, then field surveys in both seasons will be considered complementary for estimating local bat assemblages. In contrast, if bat species compositions in the dry season are a nested subset of the species present in the rainy season, then field surveys in both seasons will be considered redundant. Our results showed that field surveys performed only during the rainy season exhibited the same efficacy in recording bat species as field surveys considering both dry and rainy seasons combined. Consequently, the rare species sampled in the rainy season contributed to the uniqueness of communities in terms of species composition. Considering that time, funding, and the number of field personnel available for work are important factors when determining the sampling effort in highly biodiverse regions like the tropics, our results can be useful in establishing protocols for research projects with limited resources aiming to create a comprehensive list of species. 相似文献
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Richard Hofmann Michael Hautmann Arnaud Brayard Alexander Nützel Kevin G. Bylund James F. Jenks Emmanuelle Vennin Nicolas Olivier Hugo Bucher 《Palaeontology》2014,57(3):547-589
Based on the quantitative community analysis using species‐level identifications, we track the restoration of benthic ecosystems after the end‐Permian mass extinction throughout the Lower Triassic of the western USA. New data on the palaeoecology of the Thaynes Group and Sinbad Formation are provided, which fill a gap between the recently studied palaeoecology of the Griesbachian–Dienerian Dinwoody Formation and the Spathian Virgin Formation. In the Sinbad Formation and Thaynes Group, 17 species (12 genera) of bivalves, 7 species and genera of gastropods and 2 species and genera of brachiopods are recognized. The new bivalve genus Confusionella (Pteriidae) is described. A comprehensive review of the whole Lower Triassic succession of benthic ecosystems of the western USA indicates that mid‐ and inner shelf environments show incipient recovery signals around the Griesbachian–Dienerian transition, during the Smithian and, most profound, during the early Spathian. Ecological data from youngest strata of the Dinwoody Formation as well as stratigraphic ranges of species suggest that the late Dienerian was likely a time interval of environmental stress for benthic ecosystems. Despite some evidence for short‐term environmental disturbances (e.g. shift of dominant taxa, transient drop in alpha‐diversity) during the Smithian–Spathian transition, benthic ecosystems did not show any notable taxonomic turnover at that time, in contrast to the major crisis that affected ammonoids and conodonts. Whereas alpha‐diversity of benthic communities generally increased throughout the Early Triassic, beta‐diversity remained low, which reflects a persistently wide environmental range of benthic species. This observation is in accordance with a recently proposed model that predicts a time lag between increasing within‐habitat diversity (alpha‐diversity) and the onset of taxonomic differentiation between habitats (beta‐diversity) during biotic recoveries from mass extinction events. The observation that beta‐diversity had not significantly increased during the Early Triassic might also provide an explanation for the comparably sluggish increase in benthic diversity during that time, which has previously been attributed to persistent environmental stress. 相似文献
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Winter bait stations are becoming a commonly used technique for multispecies inventory and monitoring but a technical evaluation of their effectiveness is lacking. Bait stations have three components: carcass attractant, remote camera, and hair snare. Our 22,975 km2 mountainous study area was stratified with a 5 × 5 km sampling grid centered on northern Idaho and including portions of Washington, Montana, and British Columbia. From 2010–14, we conducted 563 sampling sessions at 497 bait stations in 453 5 × 5 km cells. We evaluated the effectiveness of cameras and hair snare DNA collection at stations to detect species and individual animals, factors affecting DNA viability, the effectiveness of re‐visiting stations, and the influence of elevation, seasonality, and latency on species detections. Cameras were more effective at detecting multiple species than DNA hair snaring. Length of deployment time and elevation increased genetic species ID success but individual ID success rates were increased only by collecting hairs earlier in the season. Re‐visiting stations did not change camera or genetic species detection results but did increase the number of individual genotypes identified. Marten and fisher were detected quickly while bobcat and coyote showed longer latency to detection. Seasonality significantly affected coyote and bobcat detections but not marten, fisher, or weasel. Multispecies bait station study design should incorporate mixed elevation sites with stratified seasonality. Priority should be given to including cameras as components of bait stations over hair snares, unless there is a specific genetic goal to the study. A hair snare component should be added, however, if individual ID or genetic data are necessary. Winter stations should be deployed a minimum of 45–60 days to allow for detection of low density species and species with long latency to detection times. Hair samples should be collected prior to DNA‐degrading late season rain events. Re‐visiting stations does not change which species are detected at stations; therefore, studies with objectives to delineate species presence or distribution will be more effective if they focus on deploying more stations across a broader landscape in lieu of surveying the same site multiple times. 相似文献