地黄属分子系统学分析

地黄属是中国准特有属,属内种间关系仍待澄清。该研究基于多个个体的叶绿体与核基因片段对地黄属进行系统发育重建,探讨属内物种分化与可能历史。结果表明:(1)地黄属为单系群,天目地黄为本属原始类群,并与湖北地黄互为姐妹群或连续姐妹群,裂叶地黄-高地黄、地黄-茄叶地黄分别组成姐妹群;(2)多个个体构建的系统树更能揭示本属物种关系的复杂性;(3)祖先分布区重建表明本属经历过3次扩张与2次隔离过程,物种形成过程与历史气候变化密切相关。最后该研究提出了地黄属物种形成研究亟待解决的几个重要问题。     

A revision of the genus <Emphasis Type="Italic">Podococcus</Emphasis> (<Emphasis Type="Italic">Arecaceae</Emphasis>)

Summary  A taxonomic revision of the palm genus Podococcus (Arecaceae) is presented. Two species are recognised: P. barteri, a species relatively widespread in a coastal band from Nigeria to the D. R. Congo and P. acaulis, a species previously considered conspecific to P. barteri, almost exclusively confined to Gabon. The taxonomic history, morphology, distribution and conservation status of the genus and each species are discussed     

Rhodopechys obsoleta (desert finch): a pale ancestor of greenfinches ( Carduelis spp.) according to molecular phylogeny

The evolutionary history of three out of four birds traditionally classified into the genus Rhodopechys birds has been studied by comparing their mitochondrial cytochrome b DNA sequence with that of greenfinches and other genus Carduelis finches. The desert finch (Rhodopechys obsoleta) or a sister extinct species seems to have existed about 6 million years ago in Asian and perhaps African desert-like areas. This bird has no molecular relationship with other Rhodopechys birds and seems to have given rise to the greenfinches radiation, probably by allopatry of marginal or isolated groups; the latter would have evolved to green plumage colours and more simple song modulations (i.e., greenfinches). The possible role of assortative mating and the newly postulated acquired phenotypic characters in greenfinches speciation are discussed.     

A new species of <Emphasis Type="Italic">Brasiliomyces</Emphasis> (Erysiphaceae) on <Emphasis Type="Italic">Dalbergia cultrata</Emphasis> var. <Emphasis Type="Italic">cultrata</Emphasis> from Thailand

A powdery mildew fungus on leaves of Dalbergia cultrata var. cultrata (Fabaceae) collected at the Queen Sirikit Botanical Garden in northern Thailand is proven to be a new species of the genus Brasiliomyces and is described as B. chiangmaiensis sp. nov. with light and SEM micrographs. Differences in known Brasiliomyces species are discussed, and a key to species of this genus is provided.     

Phylogeny and phylogeography of the Mediterranean species of the parasitic ant genus <Emphasis Type="Italic">Chalepoxenus</Emphasis> and its <Emphasis Type="Italic">Temnothorax</Emphasis> hosts

We analysed the phylogenetic and phylogeographic relationships of four Mediterranean species of the rare slave-making ant genus Chalepoxenus and eleven of its about 20 Temnothorax host species by sequencing the mitochondrial Cytochrome Oxidase I and II genes. Neighbour-Joining, Maximum Parsimony and Bayesian analyses based on 1320 bp indicate that the genus Chalepoxenus constitutes a monophylum. In all three analyses, C. kutteri from Southwest Europe and the workerless, “degenerate slavemaker” C. brunneus from North Africa form a monophyletic group. C. muellerianus and C. tauricus, distributed in Southern Europe and Ukraine, respectively, form a monophylum in the Neighbour-Joining and the Maximum Parsimony analysis. In our limited set of only 11 of several hundred Temnothorax species, T. flavicornis forms the sister group of Chalepoxenus. Our study further indicates paraphyly of the genus Temnothorax with respect to Chalepoxenus. Moreover, the results suggest that speciation in this slave-making genus is possibly caused by the formation of host races as different Chalepoxenus species use different hosts, and some samples seem to cluster by host species rather than by geographical distance. Received 5 September 2006; revised 17 March 2007; accepted 23 March 2007.     

Evidence for nonallopatric speciation among closely related sympatric Heliotropium species in the Atacama Desert

The genetic structure of populations of closely related, sympatric species may hold the signature of the geographical mode of the speciation process. In fully allopatric speciation, it is expected that genetic differentiation between species is homogeneously distributed across the genome. In nonallopatric speciation, the genomes may remain undifferentiated to a large extent. In this article, we analyzed the genetic structure of five sympatric species from the plant genus Heliotropium in the Atacama Desert. We used amplified fragment length polymorphisms (AFLPs) to characterize the genetic structure of these species and evaluate their genetic differentiation as well as the number of loci subject to positive selection using divergence outlier analysis (DOA). The five species form distinguishable groups in the genetic space, with zones of overlap, indicating that they are possibly not completely isolated. Among‐species differentiation accounts for 35% of the total genetic differentiation (F_ST = 0.35), and F_ST between species pairs is positively correlated with phylogenetic distance. DOA suggests that few loci are subject to positive selection, which is in line with a scenario of nonallopatric speciation. These results support the idea that sympatric species of Heliotropium sect. Cochranea are under an ongoing speciation process, characterized by a fluctuation of population ranges in response to pulses of arid and humid periods during Quaternary times.     

Evolution of ancient lake bivalves: the Lymnocardiinae (Cardiidae) of the Caspian Sea

The Caspian Sea as the largest continental water body in the world is known for its comparably high levels of biodiversity and endemism, also in mollusks. The evolution of a euryhaline taxon of cardiid bivalves, the Lymnocardiinae of the Ponto-Caspian region, remains unclear today. We studied material from the whole recent range of Lymnocardiinae (i.e., the Caspian, the Azov, and the Black Seas) using a LSU rDNA phylogeny aiming at (a) testing the monophyly of Lymnocardiinae and (b) determining the phylogenetic relationships within Cardiidae. Lymnocardiinae s.str. were monophyletic, i.e., a distinct group that included species of Hypanis, Didacna, and Monodacna. Lymnocardiinae as often understood, i.e., including Cerastoderma, are not monophyletic in our analysis and Cerastoderma should thus be transferred to Cardiinae. The Lymnocardiinae s.str. had a shallow tree topology and were poorly resolved. No clearcut biogeographical pattern could be derived from the phylogeny, i.e., species stemming from respective Ponto-Caspian regions, do not necessarily cluster together. We discuss a scenario of the evolutionary history and biogeographical (as well as taxonomic) implications. Given the complex history of the Ponto-Caspian region and the Caspian Sea in particular, the Lymnocardiinae would represent an interesting study object for addressing the consequences of environmental changes on biotic evolution at various spatial and temporal scales.     

Conservation status of <Emphasis Type="Italic">Prodontria</Emphasis> (Coleoptera: Scarabaeidae) species in New Zealand

The genus Prodontria (Scarabaeidae: Melolonthinae), which comprises 16 described species, is an endemic southern New Zealand genus occupying lowland and coastal habitats, inter-montane basins and alpine environments. Many of the species have a limited distribution and face potential threats from habitat change and predation. The only species to be formally protected is P. lewisii Broun, commonly known as the Cromwell Chafer, which is now restricted to a 81-ha reserve in Central Otago. One undescribed lowland species might be extinct as a result of habitat modification. The current status of Prodontria species, the known distribution of species and potential threats are discussed. An erratum to this article can be found at     

A Late Miocene Paratethyan mollusc fauna from the Denizli Basin (southwestern Anatolia, Turkey) and its regional palaeobiogeographic implications

We report on a Late Miocene mollusc fauna from a single locality in the Denizli Basin in southwestern Turkey that is composed of ten presumably euryhaline species and three freshwater species. The fauna is remarkably distinct from faunas of the adjacent Late Miocene Aegean and Euxinian Basins, and has elements in common with the modern Caspian Sea fauna in the form of Didacna species. The suggested age of the fauna (Late Miocene) would extend the stratigraphic range of the lymnocardiid genus Didacna (hitherto Calabrian-Extant) considerably. The palaeobiogeographic significance of the Denizli fauna is discussed.     

Snails of the genus Pachnodus (Mollusca; Gastropoda; Enidae): their origins and evolution

Aim The phylogeny of the enid land-snail genus Pachnodus was determined in order to provide information on biogeographical patterns within the granitic Seychelles islands. Location The genus Pachnodus is endemic to the granitic islands of Seychelles (Mahé, Silhouette, Praslin, La Digue and Fregate). Methods Phylogeny was determined using a cladistic analysis of nineteen shell and soft-body anatomy characters. The outgroup used was the central-east African genus Cerastus. Results The proposed phylogeny indicates that the genus divided into two distinct subgenera early in its history. Subsequent speciation occurred in parallel in the two subgenera, resulting in several islands supporting at least two distinct species representing the two subgenera. Main conclusions The pattern of speciation is largely explicable by vicariance as a result of sea-level rises, followed by habitat specialisation and further speciation. The pattern is in contrast to previously published scenarios for other taxa in the islands and indicates significant differences between evolutionary and habitat factors in the biogeography of the Seychelles fauna     

A revision of the genus Sclerosperma (Arecaceae)

Summary  A taxonomic revision of the palm genus Sclerosperma (Arecaceae) is presented. Three species are recognised: S. mannii H. Wendl., which is relatively widespread from Liberia to the Democratic Republic of Congo; S. walkeri A. Chev., which is apparently confined to the interior of Gabon and a band along the Congo River; and S. profiziana, a new species previously considered conspecific to S. mannii that is found in southwest Ghana, Congo, the Democratic Republic of Congo and Angola. The taxonomic history, morphology, distribution and conservation status of the genus and each species are discussed.     

New data on the genus <Emphasis Type="Italic">Praeglyphioceras</Emphasis> (Praeglyphioceratidae,Ammonoidea)

The history of the taxonomy and classification of the Famennian genus Praeglyphioceras Wedekind, 1908 and the family Praeglyphioceratidae are discussed. The sutural ontogeny of this genus, which is examined for the first time for two species of the genus, supports the high taxonomic rank of praeglyphioceratids. This family is mostly related to primitive Prionoceratoidea. A new species, Praeglyphioceras korobkovi sp. nov., is described from the delphinus Zone (Prolobites-Platyclymenia Genozone) of the Aktyubinsk Region of Kazakhstan.     

Distribution of basic diploid and polyploid species of Isoetes in East Asia

Aims Isoetes L. is an ancient, primitive genus of heterosporous lycopsids characterized by a strongly reduced plant. The genus occupies a unique position in plant evolution as the closest relatives of the famous tree lycopods. Hybridization and allopolyploid speciation as well as habitat preference are regarded as having played an important role in the evolution of the genus Isoetes. However, it is still uncertain what factors have impacted upon hybridization and allopolyploid speciation of the genus Isoetes. Our understanding of the origin, evolution and modern distribution pattern of Isoetes in East Asia would benefit from investigations into the relationship between the unique geographical location and topographic features and the existing fossil record in the region. Methods The chromosome number was determined from known 81 populations of 10 species of Isoetes in East Asia. The altitude was obtained in location of every population. T‐test was used to evaluate the altitude difference between diploid and polyploid populations. Data of Japanese Isoetes from Takamiya et al. was used in the study. Results There are 10 known species of Isoetes with four diploids and six polyploids in East Asia. The four diploid species (2n = 22) are found at high altitudes (mean altitude = 2649.67 ± 1396.16 m, n = 18) and isolated from each other. In contrast, the six polyploid species widely occur in low altitude regions (mean altitude = 182.62 ± 181.44 m, n = 63) and are partially sympatric. Highly significant differences (P < 0.001) were observed between the mean altitude of locations of populations of diploids and polyploids. Main conclusions The polyploidy speciations of Isoetes in East Asia might originate and develop from Holocene (Quaternary). The present pattern of distribution of Isoetes in East Asia is the result of allopatric speciation derived from vicariance, dispersal and combinations of both, and significantly correlative with the geological history and geographical changes. The change of altitude might have played an important role in allopolyploid speciation and the pattern of distribution of the genus Isoetes in East Asia by exerting a considerable influence on dispersal and hybridization opportunities of Isoetes species.     

烟杆藓属及烟杆藓在中国的新记录

从形态学而论,烟杆藓属(Buxbaumia Hedw.)在苔藓植物中是一个独特的类型。该文简要介绍了烟杆藓属的历史和该属在中国的研究状况,以及该属的模式种烟杆藓首次在中国的发现。对烟杆藓在新疆的着生生境及群落状况做了详细介绍, 还就扫描电子显微镜观察烟杆藓的孢蒴、蒴齿和孢子形态、中国烟杆藓属分种检索表及属的系统关系进行观察和探讨。     

Reticulate evolution and sea‐level fluctuations together drove species diversification of slipper orchids (Paphiopedilum) in South‐East Asia

South‐East Asia covers four of the world's biodiversity hotspots, showing high species diversity and endemism. Owing to the successive expansion and contraction of distribution and the fragmentation by geographical barriers, the tropical flora greatly diversified in this region during the Tertiary, but the evolutionary tempo and mode of species diversity remain poorly investigated. Paphiopedilum, the largest genus of slipper orchids comprising nearly 100 species, is mainly distributed in South‐East Asia, providing an ideal system for exploring how plant species diversity was shaped in this region. Here, we investigated the evolutionary history of this genus with eight cpDNA regions and four low‐copy nuclear genes. Discordance between gene trees and network analysis indicates that reticulate evolution occurred in the genus. Ancestral area reconstruction suggests that vicariance and long‐distance dispersal together led to its current distribution. Diversification rate variation was detected and strongly correlated with the species diversity in subg. Paphiopedilum (~80 species). The shift of speciation rate in subg. Paphiopedilum was coincident with sea‐level fluctuations in the late Cenozoic, which could have provided ecological opportunities for speciation and created bridges or barriers for gene flow. Moreover, some other factors (e.g. sympatric distribution, incomplete reproductive barriers and clonal propagation) might also be advantageous for the formation and reproduction of hybrid species. In conclusion, our study suggests that the interplay of reticulate evolution and sea‐level fluctuations has promoted the diversification of the genus Paphiopedilum and sheds light into the evolution of Orchidaceae and the historical processes of plant species diversification in South‐East Asia.     

Colonization and speciation on volcanic islands: phylogeography of the flightless grasshopper genus Arminda (Orthoptera,Acrididae) on the Canary Islands

Abstract Volcanic archipelagos represent excellent areas to study colonization and speciation processes. The grasshopper genus Arminda is one of many endemic taxa of the Canary Islands. It consists of seven wingless species, most of which are single‐island endemics. We sequenced two mitochondrial (12s rRNA, ND5) and two nuclear gene fragments (28s rRNA, ITS2) to reconstruct the colonization pattern of the genus. Our results are in accordance with a stepping‐stone colonization model from east to west, corresponding to the prevailing ocean currents, but alternative hypotheses cannot be fully rejected. The populations of A. brunneri from Tenerife belong to two different lineages (east and west) consistent with the geological history of the island. It remains to be tested whether these lineages represent different species and whether further lineages exist on this island. The five clades of the four western islands (A. brunneri group) have approximately similar branch lengths. The short internodes between these lineages resulted in a poorer phylogenetic resolution. Specimens from La Palma were genetically distinct and are subsequently described as a new species, Arminda palmae sp.n. Our results suggest in situ speciation on Gran Canaria, which was accompanied by a stronger degree of morphological diversification than the inter‐island speciation processes. The aberrant species A. canariensis has formerly been assigned to a monotypic subgenus Chopardminda, which is now synonymized with Arminda syn.n. based on its phylogenetic position. Gran Canaria seems to be the only island where Arminda species occur sympatrically, although allopatric speciation seems likely due to the long history of volcanism and erosion on the island.     

The phylogeny and biogeography of Gentiana L. sect. Ciminalis (Adans.) Dumort.: A historical interpretation of distribution ranges in the European high mountains

Gentiana sect. Ciminalis consists of seven mostly ecologically or geographically vicariant and closely related species which are distributed throughout the South and Central European high mountains. The analysis of a RAPD data set and trn L-intron and ITS sequences resulted in slightly different phylogenetic hypotheses. In the preferred hypothesis the group consists of two completely resolved main lineages: 1) G. clusii and G. alpina. 2) G. dinarica, G. acaulis, G. ligustica, G. angustifolia and G. occidentalis. The most important conclusions we have drawn from this phylogenetic hypothesis and from the observed patterns of molecular variation are: 1) The calcifuge ecology of G. acaulis and G. alpina evolved independently from calcicole ancestors. 2) Among the calcicole taxa speciation proceeded from East to West in a simple vicariant pattern. 3) The application of a provisional molecular clock indicates that speciation events in sect. Ciminalis probably occurred in the Quaternary. 4) Differences in infraspecific genetic variation among the widespread species suggest that G. alpina probably experienced more recent dispersal or gene flow than G. clusii and G. acaulis. 5) The large number of mutations in the lineage leading to G. angustifolia, compared to the few mutations in the lineage leading to G. dinarica, may be a result of their different population histories. While the extant range of G. angustifolia was strongly affected by Quaternary climatic fluctuations, that of G. dinarica has had a more stable climatic history. 6) The low number of mutations and the basal position in one clade of the preferred cladogram leads to the conclusion that G. dinarica is the species most similar to the last common ancestor of sect. Ciminalis.     

The morphology,taxonomy and evolution ofRhodocoma (Restionaceae)

The vegetative and reproductive morphology, culm and rhizome anatomy and seed surface micromorphology ofRhodocoma are described. It is shown that this variation is best contained by recognizing three new species in the genus. These new taxa are described, and the phylogeny of the genus is investigated by cladistic analysis. The environmental parameters and distributions of the species are related to the cladogram. This suggests that the species are at present ecologically separated, and indicates that the speciation may have been sympatric. This is the first support for the hypothesis that sympatric speciation may have been important in the speciose Cape flora.     

The biogeographic history of Phoenicurus redstarts reveals an allopatric mode of speciation and an out-of-Himalayas colonization pattern

Montane areas host high levels of diversity and endemism, and these features are tied to habitat stratification along an elevational gradient. As such, montane areas are often thought of as model systems in which sympatric speciation can occur. To test this idea, we selected Phoenicurus redstarts, an avian genus with an extensive distribution across Eurasia, as well as Northwest Africa; nine of the 14 species in the genus have distributions which include the Himalayas. We used sequences of the mtDNA ND2 and cytochrome-b genes and intron 9 of the Z chromosome specific ACO1 gene to reconstruct a phylogeny of the genus. The resulting trees were used to reconstruct a biogeographic history of Phoenicurus, and to date diversification events. We also analysed the relationship between node age and sympatry to determine the geographic mode of speciation in the genus. Our data suggest a very late Miocene, Himalayan origin for Phoenicurus. Diversification and colonization of other parts of Eurasia, as well as Northwest Africa, continued through the Pleistocene, with a rapid pulse of speciation in the late Pliocene. Allopatric speciation was the dominant mode of speciation in Phoenicurus, despite extensive distributional overlaps in the Himalayas where ecological conditions are amenable to speciation in sympatry. Our results, along with several other studies, suggest an emerging pattern where the Himalayas served as a source area for montane specialist avian lineages that subsequently colonized other Palaearctic regions.