生物降解聚烯烃类塑料研究进展

聚烯烃类塑料是一类以C–C键为骨架的高分子材料,被广泛应用于日常生活的各个领域。由于具有稳定的化学性质并且难以被环境中的微生物快速降解,聚烯烃塑料废弃物在全球范围内持续积累,造成了严重的环境污染及生态危机。近年来,利用生物方法降解聚烯烃类塑料引起了研究人员的广泛关注。自然界丰富的微生物资源为生物降解聚烯烃类塑料废弃物提供了可能,已经有一些对聚烯烃塑料具有降解能力的微生物被陆续报道。本文总结了聚烯烃类塑料生物降解资源及生物降解机制的研究进展,提出了目前聚烯烃类塑料生物降解过程存在的问题,并对未来的研究方向进行了展望。     

塑料生物降解检测方法的研究进展

塑料处理不当造成的污染问题已成为全球性难题。目前的解决办法除回收利用与使用可生物降解塑料替代之外,最主要途径仍是寻求高效的塑料降解方法。其中,采用微生物或酶处理塑料的方法因其具有条件温和、不产生次生环境污染的优势而受到越来越多的关注。塑料生物降解技术的核心是高效解聚微生物/酶,然而当前的分析检测方法无法满足塑料生物降解资源的高效筛选,因此开发准确、快速的塑料降解过程分析方法,对于生物降解资源筛选和降解效能评价具有重要意义。本文介绍了近年来在塑料生物降解领域的常用分析检测技术,包括高效液相色谱、红外光谱、凝胶渗透色谱以及透明圈测定等,重点讨论了荧光分析策略在快速表征塑料生物降解过程中的应用,为进一步规范塑料生物降解过程的表征与分析研究,以及开发更高效的塑料生物降解资源筛选方法提供借鉴。     

聚乙烯塑料生物降解研究进展

聚乙烯(polyethylene,PE)塑料是全球通用合成树脂中产量最丰富的品种，也是最难降解的塑料之一，其在环境中大量积累已造成严重的生态污染。传统的垃圾填埋、堆肥和焚烧处理技术难以满足生态环境的保护要求，生物降解是解决塑料污染问题的一种生态友好、成本低廉、前景可期的方法。本文对PE塑料的化学结构、降解微生物的种类、降解酶和代谢途径等方面进行了综述，结合国内外PE塑料生物降解的前沿和热点问题，建议重点开展高效降解菌株筛选、人工合成菌群构建、降解酶的挖掘与改造等方面的研究，为PE塑料生物降解研究提供路径选择和理论借鉴。     

Perspectives and vision for strain selection in bioaugmentation

Notwithstanding the phenomenally large and ever-increasing resource of pollutant-degrading microbial isolates in laboratories around the globe, inoculum survival remains the 'Achilles' heel' for bioaugmentation of contaminated land. Considerable effort has been invested into inoculum strain selection to facilitate pollutant biodegradation, ranging from the isolation of 'superbugs,' which are microorganisms highly resilient to environmental stresses, harboring catabolically superior pollutant-degrading enzymes, to the other extreme in 'priming', where pollutant degradation is carried out through the addition of soil enriched with an undefined consortium of pollutant-degrading microorganisms.     

Biotechnology of petroleum pollutant biodegradation

Procedures designed to meet the physiological needs of petroleum hydrocarbon (PHC) degrading microorganisms are useful in mitigating environmental damage caused by marine and terrestrial PHC spills. By similar approaches, soil can be utilized as a cost-effective biological incinerator for hazardous PHC wastes. Physiological ecology needs to complement genetic engineering efforts for an effective attack on environmental pollution problems.     

大环内酯类抗生素微生物降解的研究进展

大环内酯类抗生素是一类以大环内酯为母核的广谱抗生素。近些年,由于人们对其不规范的生产和使用,抗生素污染成为了重要的环境问题。大量研究表明,微生物降解是现阶段处理抗生素污染的最理想方法。为进一步推动大环内酯类抗生素生物降解的研究,文中概述了大环内酯类抗生素的环境污染现状、微生物降解菌株、降解酶、降解途径和降解大环内酯类抗生素的微生物处理方法,并对大环内酯类抗生素生物降解亟待解决的瓶颈问题进行了讨论,以期为微生物降解后续研究提供参考。     

Recent developments in microbial biotransformation and biodegradation of dioxins

Polychlorinated dibenzo-p-dioxins (PCDDs) and polychlorinated dibenzofurans (PCDFs), commonly known as dioxins (PCDD/Fs), are toxic environmental pollutants formed from various sources. Elimination of these pollutants from the environment is a difficult task due to their persistent and ubiquitous nature. Removal of dioxins by biological degradation (biodegradation) is considered a feasible method as an alternative to other expensive physicochemical approaches. Biodegradation of dioxins has been extensively studied in several microorganisms, and details concerning biodiversity, biodegradation, biochemistry and molecular biology of this process have accumulated during the last three decades. There are several microbial mechanisms responsible for biodegradation of dioxins, including oxidative degradation by dioxygenase-containing aerobic bacteria, bacterial and fungal cytochrome P-450, fungal lignolytic enzymes, reductive dechlorination by anaerobic bacteria, and direct ether ring cleavage by fungi containing etherase-like enzymes. Many attempts have been made to bioremediate PCDD/Fs using this basic knowledge of microbial dioxin degradation. This review emphasizes the present knowledge and recent advancements in the microbial biotransformation, biodegradation and bioremediation of dioxins.     

稳定同位素探针技术在有机污染物生物降解中的应用

稳定同位素探针技术(Stable isotope probing,SIP)是稳定同位素标记技术和各种分子生物学手段相结合的一系列技术总称。将其应用于探查污染物降解的功能微生物,实现了不经过分离培养直接把微生物的代谢功能、微生物间相互作用与微生物种群结合起来,从而克服了传统分离培养的缺陷,扩大了微生物资源的利用空间,具有广阔的发展前景。本文介绍了稳定同位素探针技术的基本原理和技术路线,对常规PLFA-SIP、DNA-SIP、RNA-SIP的特点进行了阐述和对比;综述了SIP在有机污染物——苯系物、多环芳烃、多氯联苯生物降解方面的研究进展,提出SIP应用于根际研究是今后该技术在生物降解研究中的一个发展方向。     

Use of filamentous cyanobacteria for biodegradation of organic pollutants.

Biodegradation is increasingly being considered as a less expensive alternative to physical and chemical means of decomposing organic pollutants. Pathways of biodegradation have been characterized for a number of heterotrophic microorganisms, mostly soil isolates, some of which have been used for remediation of water. Because cyanobacteria are photoautotrophic and some can fix atmospheric nitrogen, their use for bioremediation of surface waters would circumvent the need to supply biodegradative heterotrophs with organic nutrients. This paper demonstrates that two filamentous cyanobacteria have a natural ability to degrade a highly chlorinated aliphatic pesticide, lindane (gamma-hexachlorocyclohexane); presents quantitative evidence that this ability can be enhanced by genetic engineering; and provides qualitative evidence that those two strains can be genetically engineered to degrade another chlorinated pollutant, 4-chlorobenzoate.     

Petroleum biodegradation in marine environments

Petroleum-based products are the major source of energy for industry and daily life. Petroleum is also the raw material for many chemical products such as plastics, paints, and cosmetics. The transport of petroleum across the world is frequent, and the amounts of petroleum stocks in developed countries are enormous. Consequently, the potential for oil spills is significant, and research on the fate of petroleum in a marine environment is important to evaluate the environmental threat of oil spills, and to develop biotechnology to cope with them. Crude oil is constituted from thousands of components which are separated into saturates, aromatics, resins and asphaltenes. Upon discharge into the sea, crude oil is subjected to weathering, the process caused by the combined effects of physical, chemical and biological modification. Saturates, especially those of smaller molecular weight, are readily biodegraded in marine environments. Aromatics with one, two or three aromatic rings are also efficiently biodegraded; however, those with four or more aromatic ring are quite resistant to biodegradation. The asphaltene and resin fractions contain higher molecular weight compounds whose chemical structures have not yet been resolved. The biodegradability of these compounds is not yet known. It is known that the concentrations of available nitrogen and phosphorus in seawater limit the growth and activities of hydrocarbon-degrading microorganisms in a marine environment. In other words, the addition of nitrogen and phosphorus fertilizers to an oil-contaminated marine environment can stimulate the biodegradation of spilled oil. This notion was confirmed in the large-scale operation for bioremediation after the oil spill from the Exxon Valdez in Alaska. Many microorganisms capable of degrading petroleum components have been isolated. However, few of them seem to be important for petroleum biodegradation in natural environments. One group of bacteria belonging to the genus Alcanivorax does become predominant in an oil-contaminated marine environment, especially when nitrogen and phosphorus fertilizers are added to stimulate the growth of endogenous microorganisms.     

Systemic approaches to biodegradation

Biodegradation, the ability of microorganisms to remove complex chemicals from the environment, is a multifaceted process in which many biotic and abiotic factors are implicated. The recent accumulation of knowledge about the biochemistry and genetics of the biodegradation process, and its categorization and formalization in structured databases, has recently opened the door to systems biology approaches, where the interactions of the involved parts are the main subject of study, and the system is analysed as a whole. The global analysis of the biodegradation metabolic network is beginning to produce knowledge about its structure, behaviour and evolution, such as its free-scale structure or its intrinsic robustness. Moreover, these approaches are also developing into useful tools such as predictors for compounds' degradability or the assisted design of artificial pathways. However, it is the environmental application of high-throughput technologies from the genomics, metagenomics, proteomics and metabolomics that harbours the most promising opportunities to understand the biodegradation process, and at the same time poses tremendous challenges from the data management and data mining point of view.     

聚乳酸的生物降解

聚乳酸(polylactic acid, PLA)因其良好的理化性能、生物相容性和生物降解性而备受关注，已被认为是石油基塑料最具潜力的替代者，但在实际应用中仍然存在降解缓慢循环周期长的问题，因此对PLA的生物降解深入研究对于解决塑料垃圾污染和缓解能源危机至关重要。近年来，有关微生物(放线菌、细菌和真菌)和酶(蛋白酶、脂肪酶、酯酶和角质酶)降解PLA的研究已经取得了一定的进展。本文从降解微生物、降解酶和降解机制等方面综述了PLA生物降解的研究进展，并展望了PLA生物降解研究未来的发展趋势。     

微生物对偶氮染料的脱色及其基因工程研究进展

偶氮染料广泛应用在纺织印染、造纸印刷等行业中。染料废水的排放将会导致严重的环境污染,使用微生物处理染料废水是解决此问题的有效方法。该文概述了微生物对偶氮染料的脱色的研究,包括细菌对偶氮染料的脱色,真菌对偶氮染料的脱色,脱色产生的芳香胺并进一步被降解,以及基因工程技术在微生物对偶氮染料脱色的研究进展。     

Biocatalysis, biodegradation and bioinformatics

Biocatalysis, biodegradation and bioinformatics are prominent scientific fields in industrial microbiology and biotechnology. This paper describes developments in these fields with a focus on the role of David T Gibson as a researcher and mentor. He has pioneered studies on the mechanisms by which aerobic microorganisms transform aromatic hydrocarbons. In addition, his research has served as a model for further investigations into bacterial atrazine and dichloromethane catabolism described here. Microbial catabolism research requires information on organic chemistry, microorganisms, metabolic pathways, catabolic genes, and enzymes. These information needs are now being met more comprehensively by development of the University of Minnesota Biocatalysis/Biodegradation Database. http://dragon.labmed.umn.edu/∼lynda/index.html The database is built on the ideas championed by David Gibson that a knowledge of microbial catabolic reactions should be organized in a mechanistic fashion and in a systematic format. Received 27 March 1997/ Accepted in revised form 05 June 1997     

Biodegradation of aromatic compounds: current status and opportunities for biomolecular approaches

Biodegradation can achieve complete and cost-effective elimination of aromatic pollutants through harnessing diverse microbial metabolic processes. Aromatics biodegradation plays an important role in environmental cleanup and has been extensively studied since the inception of biodegradation. These studies, however, are diverse and scattered; there is an imperative need to consolidate, summarize, and review the current status of aromatics biodegradation. The first part of this review briefly discusses the catabolic mechanisms and describes the current status of aromatics biodegradation. Emphasis is placed on monocyclic, polycyclic, and chlorinated aromatic hydrocarbons because they are the most prevalent aromatic contaminants in the environment. Among monocyclic aromatic hydrocarbons, benzene, toluene, ethylbenzene, and xylene; phenylacetic acid; and structurally related aromatic compounds are highlighted. In addition, biofilms and their applications in biodegradation of aromatic compounds are briefly discussed. In recent years, various biomolecular approaches have been applied to design and understand microorganisms for enhanced biodegradation. In the second part of this review, biomolecular approaches, their applications in aromatics biodegradation, and associated biosafety issues are discussed. Particular attention is given to the applications of metabolic engineering, protein engineering, and “omics” technologies in aromatics biodegradation.     

全氟辛烷磺酸生物降解研究进展

全氟化合物(perfluorinated compounds,PFCs)是碳氢类化合物及其衍生物中氢原子全部被氟原子取代后形成的一类化合物。全氟辛烷磺酸(perfluorooctane sulfonate,PFOS)是一种典型的全氟化合物,对于生物具有多方面的毒性。研究发现,PFOS广泛存在于环境中,造成了一定的污染,PFOS的降解成为亟待解决的问题。但是由于PFOS稳定性高,降解较为困难,尤其是在生物降解方面的研究较少。本文主要介绍了PFOS降解技术的发展现状以及存在的问题,并提出PFOS生物降解的可能途径。     

Lignocellulose biodegradation: Fundamentals and applications

Lignocelluloses are the building blocks of allplants and are ubiquitous to most regions ofour planet. Their chemical properties make it asubstrate of enormous biotechnological value.The basic chemistry of cellulose,hemicellulose, and lignin has a profound effecton lignocellulose tertiary architecture. Theseintricate associations constitute physical andchemical barriers to lignocellulose utilizationand biodegradation in natural and man-madeenvironments. Overcoming these barriers is thekey to unlocking the commercial potential oflignocellulose. Understanding lignocellulosedegradation under natural conditions forms thebasis of any lignocellulose-based application.A variety of microorganisms and mechanisms areinvolved in the complete biodegradation oflignocellulose in natural environments rangingfrom soil and rumen ecosystems to the termitehindgut. The primary objective oflignocellulose pretreatment by the variousindustries is to access the potential of thecellulose and hemicellulose encrusted by ligninwithin the lignocellulose matrix. Currentworking technologies based on the principles ofsolid-state fermentation (SSF) are brieflyreviewed. The use of unsterile lignocellulosicsfor bioremediation purposes holds promise forcost-effective environmental clean-upendeavors. Novel lignocellulose-basedapplications have found functionality intextile, biological control, and medicalresearch fields and might be exploited there inthe near future. Ultimately, lignocellulosewill probably accompany man to his voyages intospace for interest in this field isintensifying. Therefore, proper management oflignocellulose biodegradation and utilizationcan serve to improve the quality of theenvironment, further man's understanding of theuniverse, and ultimately change local economiesand communities.     

微生物胞外活性氧的产生及其促进有机污染物降解的研究进展

生物法处理是环境中有机污染物去除的主要途径,具有费用低、环境影响小等特点,其不足之处在于所需处理时间长,尤其当有机污染物难降解时,处理时间长达数十年甚至数百年.胞外活性氧(extracellular reactive oxygen species,EROS)是微生物代谢时产生的一类含氧活性基团,对难降解有机物的生物降解...     

Primary biodegradation of amine oxide and quaternary ammonium amphiphiles

Biodegradation of two amphiphilic “soft” antimicrobially active derivatives of lauric (dodecanoic) acid, a quaternary ammonium salt and an amine oxide bearing an amide or ester group, was followed using microorganisms from activated sludge. Primary biodegradation was determined by ion-selective electrodes, total biodegradation as the chemical oxygen demand. Though organic ammonium salts quickly undergo primary biodegradation, the rest of the molecule is difficult to destroy. In contrast, amine oxides are easily biodegradable.