The influence of microclimate on bryophyte diversity in an urban Japanese garden landscape

Landscape and Ecological Engineering - Japanese gardens play an important role in the conservation of bryophyte diversity. Previous studies have indicated that diverse garden landscapes and their...     

Patterns of bryophyte diversity and rarity at a regional scale

Information on bryophyte diversity and rarity were combined withinformation on soil conditions and land use for Walloon Brabant (centralBelgium, 1091 km²) in order to investigate whichlandscape features sustain the most rare and diverse species assemblages.Presence–absence of 325 bryophyte species was recorded in 87 grid-squaresof 4 × 4 km. Species diversity was significantly correlatedwith forest cover (r = 0.71, P <0.001), sandy soils (r = 0.61, P <0.001), loamy soils, (r = –0.68,P < 0.001), and agricultural fields(r = –0.49, P < 0.001). Themost diverse grid-squares possessed up to 182 species and were characterized byat least 10% forest cover and the presence of unique micro-habitats.Grid-squares with forest cover reaching at least 10% but lacking uniquemicro-habitats contained between 90 and 130 species. Below 10% forest cover,diversity ranged between 55 and 110 species per grid-square. However, even theleast diverse cultivated areas included a significant amount of the regionallyrare species. A number of the latter are characteristic in other areas forspecific primary habitats lacking in Walloon Brabant but display an unexpectedability to disperse throughout hostile areas and colonize secondary habitats.The tendency of such species to occur in man-made habitats decreased our abilityto predict species richness and rarity from landscape features and soilconditions.     

Genetic diversity of Nostoc symbionts endophytically associated with two bryophyte species

The diversity of the endophytic Nostoc symbionts of two thalloid bryophytes, the hornwort Anthoceros fusiformis and the liverwort Blasia pusilla, was examined using the tRNA(Leu) (UAA) intron sequence as a marker. The results confirmed that many different Nostoc strains are involved in both associations under natural conditions in the field. The level of Nostoc diversity within individual bryophyte thalli varied, but single DNA fragments were consistently amplified from individual symbiotic colonies. Some Nostoc strains were widespread and were detected from thalli collected from different field sites and different years. These findings indicate a moderate level of spatial and temporal continuity in bryophyte-Nostoc symbioses.     

湖南丹霞地貌区的苔藓植物多样性

丹霞地貌是一种特殊的红层地貌,拥有独特的植被和植物区系组成。苔藓植物在丹霞地貌植被演替中具有重要的生态意义,但其基本的种类组成和分布却不清楚。通过野外考察和标本鉴定,共发现湖南丹霞地貌区苔藓植物53科96属174种(包括变种和亚种),其中苔类植物21科24属36种,藓类植物32科72属138种,其中台湾曲柄藓(Campylopus taiwanensis)、芒尖毛口藓(Trichostomum zanderi)、小火藓(Schlotheimia pungens)、中华细枝藓(Lindergiasinensis)、疏叶叶苔(Jungermannia laxifolia)和刺叶拟蒴囊苔(Saccogynidium irregularispinosum)等6种为中国特有种;铜绿净口藓(Gymnostomum aeruginosum)、稀枝钱苔(Riccia huebeneriana)、羽枝片叶苔(Riccardia multifida)等30个种为湖南新记录种。在174种中,稀有种为87种,如梨蒴珠藓(Bartramia pomiformis)、小火藓、毛枝藓(Pilotrichopsisdentata)等,这些种大多生态幅狭窄,对生境要求较苛刻,常见种(22种)和非常常见种(30种)共52种,多为生境广泛种或世界广布种,如地钱(Marchantia polymorpha)等。文中还提供了详细的湖南丹霞地貌苔藓名录及其凭证标本信息,并建议优先保护崀山无底洞和万佛山三十六湾两个苔藓丰富的小区。     

Getting into shape: optimal ligand gradients for axonal guidance

During neural development, neurons from downstream, presynaptic regions of the nervous system (such as the retina) send spatially patterned axonal projections to upstream, target regions (the tectum or superior colliculus). A servomechanism model has been proposed to explain the pattern and time-course of axonal growth between these two regions [Honda, H., 1998. Topographic mapping in the retinotectal projection by means of complementary ligand and receptor gradients: a computer simulation study. J. Theor. Biol., 192, 235-246]. Here, we show that a modification of this model incorporating a different criterion for axonal decision-making, called the local optimum rule, is guaranteed to converge to a topographic map under a wide range of conditions encountered during neural development. A theoretical investigation of these conditions leads to new hypotheses regarding map formation.     

浙江西天目山30年来苔藓物种多样性变化

苔藓物种多样性变化对苔藓植物保护和森林生态系统健康起着重要的预警作用.基于1977-1980年和2010-2011年对西天目山国家自然保护区苔藓植物的两次详细调查,本文比较了该地区1977-2011年间苔藓植物物种多样性的变化.结果表明:(1)在过去的30年间,该地区苔藓植物的科、属、种数均呈下降趋势,苔类植物的属、种数减少尤为显著;(2)青藓科、曲尾藓科、灰藓科和丛藓科一直为该地区的优势科;(3)科的稳定性均高于属、种;(4)缓冲区的总物种数变化最大,新增物种数最多;核心区(进山门-老殿)苔藓植物种类始终最为丰富,两个时期的物种相似性最高,且苔类占新增物种数百分比最高;核心区(老殿-仙人顶)苔藓物种数最少,相似性最低;(5)核心区的物种多样性要高于缓冲区,是该地区保护苔藓植物多样性的关键区域.     

Functional diversity and composition of bryophyte water-related traits in Azorean native vegetation

Background: Functional trait-based approaches link species diversity patterns to ecosystem functioning. In the context of global change, understanding these links is vital for developing holistic biodiversity management strategies. Bryophytes, important ecosystem components owing to their biogeochemical functions, have not been the focus of many functional studies.

Aims: This is the first assessment of bryophyte functional diversity in the Azores archipelago, aiming to uncover multivariate trait richness and composition patterns along the elevational gradient on Terceira Island.

Methods: Based on five water acquisition and retention traits of leafy liverworts and mosses, we calculated functional diversity metrics within and among six bryophyte communities sampled along a 1021-m elevational transect.

Results: Trait composition differed significantly between coastal and mountain communities. Mosses presented inrolled leaves and ornamented leaf cells at low elevation but not at high elevation. These patterns were associated with an uphill shift from drier and warmer conditions to a moister and cooler environment.

Conclusions: Future climatic changes might affect bryophyte functional diversity patterns in Terceira Island, particularly for mosses. These results can be directly compared with those obtained for other archipelagos where the same protocol has been applied, allowing a joint assessment of insular vegetation functional diversity patterns.     

Protective management of trees against debarking by deer negatively impacts bryophyte diversity

When wildlife populations become too large, they impact other flora and fauna within the ecosystems that they inhabit. For example, the recent rise in population numbers of sika deer in Japan has led to the stripping of bark from tree overstories in forested areas. This has led to protective management actions, such as wrapping the trunks of trees in wire mesh. The present study investigates the impact of this management action on epiphytic diversity at Mt. Ohdaigahara, which is one of the hotspots for bryophyte diversity in Japan. The correlation between the diversity of epiphytic bryophytes and environmental variables was examined, including the presence/absence of wire mesh protection. A generalized linear model showed that species richness and bryophyte cover was significantly correlated with both tree diameter (at 1.5 m height) and tree density (P < 0.01), but negatively correlated with wire mesh protection. Inductively coupled plasma-mass spectrometry analysis showed a significant 3- to 6-fold higher concentration of zinc in bryophytes occupying tree bark under wire mesh protection than for those without wire mesh. Hence, the high sensitivity of bryophytes to zinc accumulation, as a result of toxicity caused by galvanized iron mesh, has led to the loss of species richness and bryophyte cover on tree trunks. Furthermore, other heavy metals found in wire mesh may also contribute to the negative effect on bryophytes. Therefore, to establish best practices for biodiversity conservation that include bryophytes, materials that are free of heavy metals should be preferentially used for tree protection.     

Benthic diversity patterns in oxygenation gradients: an example from the Middle Jurassic of Switzerland

Etter, W. 1995 11 30 Benthic diversity patterns in oxygenation gradients: an example from the Middle Jurassic of Switzerland.
A high-resolution study of the lower Opalinum Clay (Aalenian, Middle Jurassic) of northern Switzerland revealed a pattern of macrobenthic diversity and abundance which does not conform with the dysaerobic-biofacies models currently in use. The upper dysoxic zone contains an association of moderate diversity and moderate abundance which, with increasing oxygen depletion, is replaced by an association dominated by a few peak opportunists (tiny epibenthic bivalves and presumably small annelids) at high abundances but very low diversity. In the lower dysoxic zone, abundance drops to very low levels, but diversity rises again to quite high values. The rather high diversity of the lower dysaerobic biofacies is explained in part by the presence of specialized chemosymbiontic species. The pattern documented in the lower Opalinum Clay has been calibrated by sedimentologic, taphonomic, ichnologic, and microfaunal evidence. It contradicts equilibrium models, which postulate gradual or even linear decreases in both abundance and diversity with increasing oxygen-depletion of the bottom water. The equation of rising diversity with improved oxygenation can be misleading and can yield erroneous results in the reconstruction of ancient bottom-water oxygenation. □ Dysaerobic biofacies, high-resolution study, diversity, chemosymbionts, equilibrium and non-equilibrium models .     

Historical processes enhance patterns of diversity along latitudinal gradients

One of the more vexing issues in ecology is how historical processes affect contemporary patterns of biodiversity. Accordingly, few models have been presented. Two corollary models (centre of origin, time-for-speciation) can be used to make quantitative predictions characterizing the tropical niche conservatism hypothesis and describe diversification as diffusion and subsequent cladogenesis of species away from the place of origin of a higher taxon in the tropics. Predictions derived from such models are: (i) species richness declines toward the periphery of the range of a higher taxon; (ii) taxa are more derived toward the periphery than the centre; (iii) ages of taxa are lower toward the periphery than the centre; and (iv) ages and measures of derivedness are less variable toward the periphery of the range of a higher taxon. I tested these predictions to better understand the formation of one of the most ubiquitous patterns of biodiversity-the latitudinal gradient in species richness. Results indicate well-supported predictions for New World leaf-nosed bats and that diversification has had strong influences on latitudinal gradients of species richness. A better understanding of how evolutionary diversification of taxa contributes to formation of patterns of species richness along environmental gradients is necessary to fully understand spatial variation in biodiversity.     

Two-level hierarchical model of optimal biological diversity

In order to analyze the possible mechanisms of optimization of biodiversity, the two-level hierarchical model was developed and studied. The lower level subsystems are interpreted as the populations and the upper level is considered as the community of one trophic level consisting of these populations. The indexes at the population level (phenotypic diversity) and at the community level (the number of species) were considered as the characteristics of an integrated hierarchical system. The adaptation of biosystems to environmental conditions occurs through the optimization of diversity at the population and community levels during their interaction. The criteria of optimization used in the lower and upper levels correspond to maximal efficiency of resource utilization by biosystems. The results of modeling correspond to a known empirical biodiversity pattern that allows the use of the optimal diversity principle as an additional mechanism of its formation at the population and cenosis levels.     

Beta‐diversity gradients of butterflies along productivity axes

Aim Several lines of evidence suggest that beta diversity, or dissimilarity in species composition, should increase with productivity: (1) the latitudinal species richness gradient is most closely related to productivity and associated latitudinal beta‐diversity relationships have been described, and (2) the scale dependence of the productivity–diversity relationship implies that there should be a positive productivity–beta‐diversity relationship. However, such a pattern has not yet been demonstrated at broad scales. We test if there is a gradient of increasing beta diversity with productivity. Location Canada. Methods Canada was clustered into regions of similar productivity regimes along three remotely sensed productivity axes (minimum and integrated annual productivity, seasonality of productivity) and elevation. The overall (β_j), turnover (β_sim) and nestedness (β_nes) components of beta diversity within each productivity regime were estimated with pairwise dissimilarity metrics and related to cluster productivity with partial linear regression and with spatial autoregression. Tests were performed for all species, productivity breadth‐based subsets (e.g. species occurring in many and a moderate number of productivity regimes), and pre‐ and post‐1970 butterfly records. Beta diversity between adjacent clusters along the productivity gradients was also evaluated. Results Within‐cluster β_j and β_sim increased with productivity and decreased with seasonality. The converse was true for β_nes. All species subsets responded similarly; however, productivity–beta‐diversity relationships were weaker for the post‐1970 temporal subset and strongest for species of moderate breadth. Between‐cluster beta diversity (β_j) and nestedness (β_nes) declined with productivity. Main conclusions As predicted, beta diversity of communities within productivity regimes was observed to increase with productivity. This pattern was driven largely by a gradient of species turnover. Therefore, beta diversity may make an important contribution to the broad‐scale gradient of species richness with productivity. However, this species richness gradient dominates regional beta diversity between productivity regimes, resulting in decreasing between‐productivity dissimilarity with productivity driven by a concurrent decline in nestedness.     

Seasonal reversals of upland-riparian diversity gradients in the Sonoran Desert

Flood disturbance and water resource availability vary sharply over time and space along arid‐region rivers and can interact in complex fashion to shape diversity patterns. Plant diversity showed spatial patterning along a topogradient from the floodplain of the San Pedro River (Arizona, USA) to the arid upland, but the patterns shifted temporally as the suite of limiting factors changed. During two of three sampling times, spatial diversity patterns were shaped primarily by gradients of water availability, the regional limiting factor. In the summer dry season, microscale diversity (species richness per 1 m²) and mesoscale diversity (cumulative species and functional types in 20, 1‐m² plots) of herbaceous plants decreased along the topogradient from floodplain to upland, reflecting the greater water availability on the low surfaces. During a summer wet season with moderate rains and flooding, diversity increased in all hydrogeomorphic zones (floodplain, terrace, upland), but the spatial pattern along the topogradient persisted. Following a very wet winter, patterns along the topogradient reversed: scour from large floods limited diversity on the floodplain and competitive exclusion limited the diversity on undisturbed river terrace, while abundant rains allowed for high microscale diversity in the upland. Disturbance and resource availability thus interacted to influence plant species diversity in a fashion consistent with the dynamic‐equilibrium model of species diversity. In contrast to the microscale patterns, mesoscale diversity of species and functional types remained high in the floodplain during all sampling times, with 58% more plant species and 90% more functional types sampled in low floodplain than arid upland for the year as a whole. Species with a wide range of moisture and temperature affinities were present in the floodplain, and seasonal turnover of species was high in this zone. The floodplain zone of a perennial to intermittent‐flow river thus had greater plant diversity than arid Sonoran Desert upland, as measured at temporal scales that capture seasonal variance in resource and disturbance pulses and at spatial scales that capture the environmental heterogeneity of floodplains. Although periodically limited by intense flood disturbance, diversity remains high in the floodplain because of the combination of moderate resource levels (groundwater, seasonal flood water) and persistent effects of flood disturbance (high spatial heterogeneity, absence of competitive exclusion), in concert with the same climatic factors that produce seasonally high diversity in the region (temporally variable pulses of rainfall).     

Energy gradients and the geographic distribution of local ant diversity

Geographical diversity gradients, even among local communities, can ultimately arise from geographical differences in speciation and extinction rates. We evaluated three models—energy-speciation, energy-abundance, and area—that predict how geographic trends in net diversification rates generate trends in diversity. We sampled 96 litter ant communities from four provinces: Australia, Madagascar, North America, and South America. The energy-speciation hypothesis best predicted ant species richness by accurately predicting the slope of the temperature diversity curve, and accounting for most of the variation in diversity. The communities showed a strong latitudinal gradient in species richness as well as inter-province differences in diversity. The former vanished in the temperature-diversity residuals, suggesting that the latitudinal gradient arises primarily from higher diversification rates in the tropics. However, inter-province differences in diversity persisted in those residuals—South American communities remained more diverse than those in North America and Australia even after the effects of temperature were removed.     

Polyvalent vaccines for optimal coverage of potential T-cell epitopes in global HIV-1 variants

HIV-1/AIDS vaccines must address the extreme diversity of HIV-1. We have designed new polyvalent vaccine antigens comprised of sets of 'mosaic' proteins, assembled from fragments of natural sequences via a computational optimization method. Mosaic proteins resemble natural proteins, and a mosaic set maximizes the coverage of potential T-cell epitopes (peptides of nine amino acids) for a viral population. We found that coverage of viral diversity using mosaics was greatly increased compared to coverage by natural-sequence vaccine candidates, for both variable and conserved proteins; for conserved HIV-1 proteins, global coverage may be feasible. For example, four mosaic proteins perfectly matched 74% of 9-amino-acid potential epitopes in global Gag sequences; 87% of potential epitopes matched at least 8 of 9 positions. In contrast, a single natural Gag protein covered only 37% (9 of 9) and 67% (8 of 9). Mosaics provide diversity coverage comparable to that afforded by thousands of separate peptides, but, because the fragments of natural proteins are compressed into a small number of native-like proteins, they are tractable for vaccines.