Climate and health: Observation and modeling of malaria in the Ferlo (Senegal)

The aim of this work, undertaken in the framework of QWeCI (Quantifying Weather and Climate Impacts on health in the developing countries) project, is to study how climate variability could influence malaria seasonal incidence. It will also assess the evolution of vector-borne diseases such as malaria by simulation analysis of climate models according to various climate scenarios for the next years. Climate variability seems to be determinant for the risk of malaria development (Freeman and Bradley, 1996 [1], Lindsay and Birley, 1996 [2], Kuhn et al., 2005 [3]). Climate can impact on the epidemiology of malaria by several mechanisms, directly, via the development rates and survival of both pathogens and vectors, and indirectly, through changes in vegetation and land surface characteristics such as the variability of breeding sites like ponds.     

Selection of antimalarial drug resistance after intermittent preventive treatment of infants and children (IPTi/c) in Senegal

Senegal has since 2003 used sulphadoxine-pyrimethamine (SP) for Intermittent Preventive Treatment (IPT) of malaria in risk groups. However, the large-scale IPT strategy may result in increasing drug resistance. Our study investigated the possible impact of SP-IPT given to infants and children on the prevalence of SP-resistant haplotypes in the Plasmodium falciparum genes Pfdhfr and Pfdhps, comparing sites with and without IPTi/c. P. falciparum positives samples (n = 352) were collected from children under 5 years of age during two cross-sectional surveys in 2010 and 2011 in three health districts (two on IPTi/c and one without IPTi/c intervention) located in the southern part of Senegal. The prevalence of SP-resistance-related haplotypes in Pfdhfr and Pfdhps was determined by nested PCR followed by sequence-specific oligonucleotide probe (SSOP)–ELISA. The prevalence of the Pfdhfr double mutant haplotypes (CNRN and CICN) was stable between years at < 10% in the control group (P = 0.69), while it rose significantly in the IPTi/c group from 2% in 2010 to 20% in 2011 (P = 0.008). The prevalence of the Pfdhfr triple mutant haplotype (CIRN) increased in both groups, but only significantly in the IPTi/c group from 41% to 65% in 2011 (P = 0.005). Conversely, the Pfdhps 437G mutation decreased in both groups from 44.6% to 28.6% (P = 0.07) and from 66.7% to 47.5% (P = 0.02) between 2010 and 2011 in the control and the IPTi/c groups, respectively. Combined with Pfdhfr, there was a weak trend for decreasing prevalence of quadruple mutants (triple Pfdhfr + Pfdhps 437G) in both groups (P = 0.15 and P = 0.34). During the two cross-sectional surveys, some significant changes were observed in the SP-resistance-related genes. However, since these changes were observed in the two groups, the IPTi/c strategy does only seem to have limited impact on resistance development and other factors as well. However, continuous monitoring will be needed, due to the up-scaling of the IPTi/c strategy in Senegal according to WHO recommendations.     

Late Holocene pollution in the Gernika estuary (southern Bay of Biscay) evidenced by the study of Foraminifera and Ostracoda

The Arketas pier in the Gernika estuary (southern Bay of Biscay) has during summer periods waters with strong hypoxia (1 ml l^–1) but curiously bears the richest assemblages of foraminifers and ostracods in the whole estuary. The most abundant species in Arketas are: Ammonia beccarii, Cribroephidium williamsoni, Haynesina germanica and Lobatula lobatula (foraminifers) Loxoconcha elliptica and Leptocythere castanea (ostracods). The benthic foraminifer sub-species A. beccarii tepida exhibits in this estuary three different morphotypes, whose distributions are controlled by changes in the salinity, dissolved oxygen and nutrient content of the waters, and thus could be used as a good indicator of environmental alteration caused by those parameters. To determine whether this environmental alteration is due to natural causes or is anthropogenic, micropalaeontologic and sedimentologic contents of a sediment core 140 cm thick have been analysed. The study of Foraminifera and Ostracoda assemblages, species diversity, and A. beccarii tepida morphotypes allows us to reconstruct the evolution of this part of the estuary over the last 3800 years. To examine anthropogenic effects at this site, we compared the occurrence of heavy metals Pb, As, with the record of A. beccarii tepida morph C in Arketas. The maximum concentration of heavy metals coincides with the maximum occurrence of A. b. tepida morph C, in the 1970s (date calculated according to the estimated rate of sedimentation in this area). This indicates that distribution of A. b. tepida morph C is, at least partially, caused by heavy metal pollution. Nevertheless, the fact that we have found no deformed tests of this taxa in Arketas induces us to think that another factor, such as dysaerobia caused by eutrophization of nutrient inputs in several areas of this estuary, might have been responsible for at least of part of the anomalous shift of A. b. tepida morph C at that time. In recent times, an increase in this anthropogenic activity was evident, reaching its maximum in the 1970s and decreasing from the 1980s. During the late Holocene period (up to 3500 years BP), this site was a middle-outer estuarine settlement, euryhaline with low to moderate salinity. This episode ends with a marine transgressive pulsation. After depositional hiatus of unknown duration, recent sediments suggest a modern palaeogeographic position of Arketas located in a lower estuary environment. The study of A. beccarii through the Holocene sediments of Arketas indicates that dysaerobic/pollution conditions were not a singular event. At the same time, the increase of A. b. tepida morph C were particularly strong over several years of the 20th Century, at precisely the time that a noticeable decrease of richness and diversity of calcareous microfauna is detected in the estuary.     

长江口邻近水域浮游动物群落特征及变动趋势

根据2000～2003年长江口邻近海域5月和8月8个航次的调查资料,对长江口浮游动物群落特征的变动趋势进行了研究。结果表明,桡足类、毛颚类和异足类在8月种数明显多于5月。8月暖流势力增强的同时淡水水团势力也增强,不同水团交汇处,浮游动物种类数和多样性指数等值线密集排列,外海暖水带来丰富的种类使该季节的种类数和多样性均明显高于5月。盐度是影响长江口浮游动物群落特征最主要的环境因子。     

Kinetics of zooplankton in an aquatic continuum: from the Marne River and reservoir to the Seine estuary

A study was carried out within a 700-km river sector, including three types of ecosystems (a reservoir, a river and its estuary) to characterise the major features of zooplankton communities in the Seine Basin. In rivers, zooplankton biomass becomes significant only when the growth rate of the organisms is higher than the dilution rate (4-5th orders rivers, according to River Continuum Concept). Upstream, short residence times favour the development of small species (Rotifers) with low individual body weight and biomass. Conversely, larger species (microcrustaceans) develop more downstream, where increased residence time leads to autochthonous production (Riverine Productivity Model). Such a pattern is greatly modified by human impact. Zooplankton input from the Marne reservoir represents one type of disruption in the general upstream-downstream trend (according to the Serial Discontinuity Concept). This reservoir is a source of microcrustaceans; they rapidly disappear mainly through fish predation, and therefore have little impact on the river phytoplankton. Discontinuities, such as confluences, have a relatively small effect on the stock of zooplankton with regard to the water release from the reservoir, but they persist more downstream, because they have the same lotic origin. A few microhabitats with macrophytes play a small role for this canalised river, but they can modify locally the plankton community structure and composition. As a whole, the flux of zooplankton rises exponentially, whereas discharge increases linearly from upstream (4th order) to downstream (8th order). In the canalised sectors, Dreissena larvae build up an important biomass, adding to that of the zooplankton sensu stricto. Especially abundant in the downstream sector of the Marne and Seine Rivers, the larvae show a widespread colonisation of the benthic substrates by the adult Dreissena. One of the largest mussel colonies in the middle estuary can contribute to a rapid decrease of zooplankton. Estuary ecosystems form a transitional zone between freshwater and seawater, with zooplankton dynamics closely linked to the particular conditions on this part of the river system.     

Integrative ecosystem analyses of phytoplankton dynamics in the York River estuary (USA)

The relative importance of biotic (top-down) vs. abiotic (bottom-up) controls on phytoplankton dynamics was investigated in the York River estuary, Virginia (USA) by a combination of extensive analyses of long-term data sets collected by the U.S. Environmental Protection Agency (EPA) monitoring program over 17 years (1984–2001), field studies (1996–1997) and ecosystem modeling analyses. Results from the analysis of long-term data records collected at three stations along the salinity gradient suggested that phytoplankton are more likely controlled by abiotic mechanisms such as resource limitation than biotic mechanisms such as grazing since annual cycles of primary production and phytoplankton biomass were similar and no grazing effects were evident based on the observed relationship between phytoplankton and zooplankton biomass (R ² < 0.2, p > 0.1). This scenario was supported by short-term field observations made over an annual cycle at three stations in the mid-channel of the estuary where both chlorophyll a and primary production demonstrated similar patterns of seasonal variation. Ratios of fluorescence before and after acidification at all study sites were relatively high suggesting low grazing pressure in the estuary. A tidally-averaged, size-structured plankton ecosystem model was previously developed and verified for the lower York River estuary. The validated ecosystem model was also used to examine this issue and simulation results supported the importance of bottom-up control in the York River estuary.     

Halicyclops korodiensis Onabamiro (Crustacea,Copepoda) in the estuary of the Warri River,Nigeria, West Africa

Halicyclops korodiensis Onabamiro was recorded in plankton samples of the brackish waters of the Warri River, Nigeria, West Africa. It is redescribed and figured.     

River flow influence on the fish community of the Tagus estuary (Portugal)

The influence of river flow on the fish community was assessed for the Tagus estuary (Portugal), based on sampling surveys carried out between 1979 and 2002. Four estuarine areas were sampled using similar fishing gear and effort in all the years considered in this study (1978–1980; 1995–1997; and 2001–2002). According to river freshwater flow values, sampling years were classified as wet (mean value of 714 m³ s⁻¹, sd = 110 m³ s⁻¹) or dry (mean value of 164 m³ s⁻¹, sd = 19m³ s⁻¹). Species richness varied between 22 and 39 according to the year, but no significant differences were related to river flow. The number of species per ecological guild was also similar in wet and dry years. Fish assemblage was dominated by marine occasional, estuarine resident and marine-estuarine opportunist species that represented near 90% of all fish species. The highest densities were represented by estuarine resident species. Fish density in dry and wet years differed significantly (mean density of 10.51 individuals 1,000 m⁻² and 3.62 individuals 1,000 m⁻², respectively), and the major differences were registered for estuarine resident, marine-estuarine opportunist and catadromous species. These differences probably reflected the estuarine habitat availability and also differences in fish densities in some estuarine areas under different flow conditions. The multivariate ordination analyses performed outlined both seasonal and spatial variation trends in fish distribution and abundance. The estuarine longitudinal gradient and its relationship with species distribution were less evident in dry years. Relationships between species abundance and river flow were different according to species, which is probably due to different needs in the timing and magnitude of river flow. Electronic supplementary material  The online version of this article (doi: ) contains supplementary material, which is available to authorized users.     

Carbonate system of the Razdolnaya River estuary (Amur Bay, Sea of Japan)

Two methods, the total alkalinity measurement by Bruevich [4] and pH measurement in a cell without liquid junction [11], were suggested for study of the carbonate system of estuaries. Based on new measurements, the empirical equations were obtained for the first and second seawater concentration constants of carbonic acid for the ranges of salinity 0–40 and temperatures 0–30°C. Applying the constants and above methods, we studied the carbonate system of the Razdolnaya River-Amur Bay estuary in two expeditions of July 2001, the first in a period of average water level and the second after a flood. In the latter survey, extremely low values (60 µatm) of pCO₂ (carbon dioxide partial pressure) were recorded in the seaward part of the estuary and extremely high ( 13 300 µatm) were noted in the river. High pCO₂ in the surface water was caused by intense bacterial activity, and low levels were caused by phytoplankton bloom. The nonconservative behavior of the total alkalinity and dissolved inorganic carbon was revealed in the estuary. Based on the data of the carbonate system, the production/destruction of organic matter was assessed.Original Russian Text Copyright © 2005 by Biologiya Morya, Tishchenko, Wong, Volkova, Gramm-Osipov, Johnson, Dudarev, Zvalinskii, Nedashkovskii, Pavlova, Chichkin, Sagalaev, Shevtsova, Shkirnikova.     

Distribution of the twenty seven dominant species of shelf benthic foraminifers on the continental shelf, north of Dakar (Senegal)

One hundred and thirty-one samples were collected on the shelf and on the uppermost slope (down to 180 m) off Northern Senegal, between 14 °50′ and 16 °20′ N latitude.Two hundred and three species of benthic foraminifers were recognized. Most of them were reported in previous works, along the coast of Africa. Twenty seven species are selected for detailed analysis and distribution maps are given for each of them. Q mode and R mode statistical analyses were performed on these selected species. The distribution is mainly related to depth; the second factor of distribution is the nature of the sediments: about 30% of the study area is covered by the muddy sediments of the pro-delta of the Senegal river. Hierarchical analysis shows that the main limit in the pattern of change of these 27 species with depth is about 60–65 m.A depth index Di, calculated on the basis of twelve selected species, gives a depth indication with a precision of about 40 m over the shelf. It is possible to envisage a possible use of this index for the investigation of Quaternary sea-level changes.     

新安江（新溪口段）浮游动物调查报告

本文通过对新安江（新溪口段）浮游动物组成的定性和定量研究,鉴定出浮游动物２８属４３种;初步探讨了该江段浮游动物的季节变化规律,并评价了水质营养状况。     

Distribution and abundance of zooplankton in the Waikato River,New Zealand

Potamoplankton is often a well developed component in large lowland rivers, yet little is known about its structure in New Zealand's longest river, the Waikato River. To redress this gap we sampled bimonthly at seven sites along the length of the river over 12 months. Rotifers were the dominant zooplankton in the Waikato River making up 85% of the total densities. Cladocerans represented 9% and copepods only 6%. Rotifers were also the most taxonomically rich group with 41 species in 20 genera identified throughout the study. Thirty rotifer species and nine genera represent new records for the river – two cladoceran species were also recorded for the first time. The highest densities of crustaceans and rotifers were found in the hydro lakes. Densities of crustaceans decreased with increasing distance downstream and densities of rotifers were on average 15 times greater than crustaceans in the lower river. The seasonality of Crustacea was similar to that in New Zealand lakes and rivers with high densities in summer and minimum densities over the winter period. Total rotifer densities showed a similar trend although there were marked seasonal differences between individual species.     

Macrobenthic community structure before, during, and after implementation of the Clean Water Act in the Neches River estuary (Texas)

Community structure of macrobenthos in the industrialized, tidal Neches River was studied 12 years after implementation of phase III of the Clean Water Act (CWA). Result were compared with a 1971–72 study conducted before implementation of the CWA and a 1984–85 study conducted after implementation of phases I & II of the CWA. The permitted BOD waste load decreased 93% between the 1971–72 and 1984–85 studies, then increased 19% between 1984–85 and the current study. A total of 50 taxa were collected during the 1971–72 study, 104 during the 1984–85 study, and 110 during the current study. Numbers of taxa per collection at each station increased by a factor of at least two between the 1971–72 and 1984–85 studies and were significantly different at the 0.0001 level. Numbers of taxa per collection at each station were not significantly different between the 1984–85 and the current study (p=0.286). Minimum collection densities in 1984–85 were higher than maximum densities in 1971–72 and were significantly different at the 0.0001 level. Collection densities were not significantly different between the 1984–85 study and the current study (p=0.374). Shannon's annual and station collection diversity values significantly increased (p=<0.05) between the 1971–72 and 1984–85 studies, but not between the 1984–85 and the current study (p=>0.05). Dendrograms of Sorenson's similarity index between all pairs of stations were more alike between the 1971–72 and the current study than between the 1984–85 and the current study. Evidence of some organic enrichment at the upper stations was indicated by the dominance of Limnodrilus hoffmeisteri and depressed oxygen concentrations. Environmental quality in the river has greatly improved since implementation of the CWA in 1972. Most of the improvments were due to phases I & II of the CWA, with little apparent change since implementation of phase III.     

Representatives of the genus Ammosiphonia He, 1977 (Foraminifera) from the Jurassic and Carboniferous of Western Siberia

The wide distribution of the genus Ammosiphonia in the Upper Jurassic and Carboniferous of Western Siberia is established for the first time. Six haplophragmoidid species of Western Siberia are assigned to this genus. The diagnosis of the genus is emended; the taxonomic positions and scopes of the species Ammosiphonia nonioninoides (Reuss), A. beresoviensis (Bulatova), and A. sibirica (Zaspelova) are revised; two new species, A. suprajurassica sp. nov. and A. valanginica sp. nov., are described.     

Macrobenthic community structure before and after pollution abatement in the Neches River estuary (Texas)

Macrobenthos and physicochemical conditions in the lower 39 km of the Neches River estuary were studied from August, 1984 to May, 1985. The results were compared with data collected in 1971–1972. Between 1972 and 1984 the permitted BOD waste load in the tidal Neches River was reduced from 123 125 kg d to 8717 kg d. River discharge and dissolved oxygen concentrations were consistently higher and salinity was lower, during the same seasons, during the 1984–1985 study. A total of 50 taxa of macrobenthos were collected in 1971–1972 and 104 taxa were collected in 1984–1985. The numbers of taxa per collection at each station in 1984–1985 were at least twice those found in 1971–1972. Minimum densities in 1984–1985 were much higher than the maximum densities in 1971–1972 at all stations. Patterns of dominance, Sorenson's similarity index, and diversity ( ) values indicated improved water quality in 1984–1985. Statistical analysis of macrobenthic diversity indicated significant differences between upper estuary and lower estuary stations in 1971–1972. No significant differences were found in 1984–1985. Significant differences in numbers of taxa, macrobenthos densities, and values between the two studies were found. Reductions of waste loads, increased river discharge, and deepening of the navigation channel were among the factors that probably contributed most to the changes in community structure of the macrobenthos observed.     

The longitudinal distribution and community dynamics of zooplankton in a regulated large river: a case study of the Nakdong River (Korea)

The longitudinal distribution and seasonal dynamics of zooplankton were examined along a 200-km section of the middle to lower Nakdong River, Korea. Zooplankton was sampled twice a month from January 1995 to December 1997 at five sites in the main river channel. There was considerable longitudinal variation in total zooplankton abundance (ANOVA, p < 0.001). All major zooplankton groups (rotifers, cladocerans, copepodids and nauplii) increased significantly with distance downstream along the river. There also were statistically significant seasonal differences in zooplankton abundance at the sampling sites (ANOVA, p < 0.01). Zooplankton abundance was high in spring and fall and low in summer and winter. The seasonal pattern of rotifers was similar to that of total zooplankton. This reflected the fact that rotifers (Brachionus calyciflorus, B. rubens, Keratella cochlearis and Polyarthra spp.) strongly dominated the zooplankton community at all locations. Among the macrozooplankton, small-bodied cladocerans (e.g. Bosmina spp.) dominated; the abundance of large-bodied cladocerans (e.g. Daphnia) was negligible (0–5 ind. l^–1). Among the environmental variables considered, partial residence time seemed to play the most important role in determining characteristics of the river zooplankton community.     

Composition,distribution and biomass of meiobenthos in the Oosterschelde estuary (SW Netherlands)

Meiofauna composition, abundance, biomass, distribution and diversity were investigated for 31 stations in summer. The sampling covered the whole Oosterschelde and comparisons between the subtidal — intertidal and between the western-central — eastern compartment were made.Meiofauna had a community density ranging between 200 and 17 500 ind 10 cm^–2, corresponding to a dry weight of 0.2 and 8.4 gm^–2. Abundance ranged between 130 and 17 200 ind 10 cm^–2 for nematodes and between 10 and 1600 ind 10 cm^–2 for copepods. Dry weight biomass of these taxa was between 0.5–7.0 gm^–2 and 0.008–0.3 gm^–2 for nematodes and copepods respectively.The meiofauna was strongly dominated by the nematodes (36–99%), who's abundance, biomass and diversity were significantly higher intertidally than subtidally and significantly higher in the eastern part than in the western part. High numbers were positively correlated with the percentage silt and negatively with the median grain size of the sand fraction. The abundance and diversity of the copepods were highest in the subtidal, but their biomass showed an inverse trend being highest on the tidal flats.The taxa diversity of the meiofauna community and species diversity of both the nematodes and the copepods were higher in subtidal stations than on tidal flats. In the subtidal, the meiofauna and copepod diversity decreased from west to east, whereas nematode diversity increased.The vertical profile clearly reflected the sediment characteristics and could be explained by local hydrodynamic conditions.Seasonal variation was pronounced for the different taxa with peak abundance in spring, summer or autumn and minimum abundance in winter.Changes in tidal amplitude and current velocity enhanced by the storm-surge barrier will alter the meiofauna community structure. As a result meiofauna will become more important in terms of density and biomass, mainly due to increasing numbers of nematodes, increasing bioturbation, nutrient mineralisation and sustaining bacterial growth. A general decrease in meiofauna diversity is predicted. The number of copepods is expected to decrease and interstitial species will be replaced by epibenthic species, the latter being more important in terms of biomass and as food for the epibenthic macrofauna and fishes.     

The Lower Triassic Werfen Formation of the Karawanken Mountains (Southern Austria) and its disaster survivor microfossils, with emphasis on Postcladella n. gen. (Foraminifera, Miliolata, Cornuspirida)

A relatively poorly known sedimentary succession (uppermost Bellerophon Formation and overlying Werfen Formation) including the Permian-Triassic Boundary (PTB) is exposed in the South-Alpine part of the Karawanken Mountains of Southern Austria. As in the Dolomites, sedimentation of the Werfen Formation mainly occurred in a subtidal shelf environment between normal and storm wave base. Muddy sedimentation was periodically interrupted by storm events resulting in the deposition of storm layers. Three sections are accurately studied. All contain the same assemblage of Foraminifera and events from the PTB to the late Early Triassic Meandrospira pusilla zone. Between these two great events, only the cornuspirid foraminiferan Postcladella n. gen. is present. Its populations are described and illustrated here under the name Postcladella kahlori n. comb. In the geological record, many taxa such as P. kahlori, i.e., undivided, tubular, initially planispirally evolute coiled, and later uncoiled, appeared successively. A reappraisal is attempted in order to discriminate the different taxa. These forms are often disaster survivors.     

Seasonal dynamics of zooplankton in a shallow eutrophic,man-made hyposaline lake in Delhi (India): role of environmental factors

Old Fort Lake, a small (1.6 ha), shallow, and recreational water body in Delhi (India) was studied through monthly surveys in two consecutive years (January, 2000–December, 2001). Precipitation is the major source of water for this closed basin lake. In addition, ground water is used for replenishing the lake regularly. This alkaline, hyposaline hard water lake contains very high ionic concentration, especially of nitrates. Based on overall ionic composition, this lake can be categorized as chloride–sulfate alkaline waters with the anion sequence dominated by SO₄ ²⁻ > Cl⁻ > HCO₃ ⁻, and the cations by Mg⁺⁺ > Ca⁺⁺. The overall seasonal variability in physicochemical profile was largely regulated by the annual cycle of evaporation and precipitation, whereas the ground water largely influences its water quality. The lake exhibited phytoplankton-dominated turbid state due to dominance of the blue green alga, Microcystis aeruginosa. The persistent cyanobacterial blooms and the elevated nutrient levels are indicative of the cultural eutrophication of the lake. This study focuses on the relative importance of eutrophic vis-à-vis hyposaline conditions in determining the structure and seasonal dynamics of zooplankton species assemblages. A total of 52 zooplankton species were recorded and rotifers dominated the community structure qualitatively as well as quantitatively. The genus Brachionus comprised a significant component of zooplankton community with B. plicatilis as the most dominant species. The other common taxa were B. quadridentatus, B. angularis, Lecane grandis, L. thalera, L. punctata, Mesocyclops sp., and Alona rectangula. Multivariate data analysis techniques, Canonical Correspondence Analysis (CCA) along with Monte Carlo Permutation Tests were used to determine the minimum number of environmental factors that could explain statistically significant (P < 0.05) proportions of variation in the species data. The significant variables selected by CCA were NH₃–N followed by percent saturation of DO, COD, SS, BOD, NO₂–N, rainfall, silicates, and PO₄–P. The results indicate that the seasonal succession patterns of the zooplankton species were largely controlled by physicochemical factors related directly or indirectly to the process of eutrophication, whereas hyposaline conditions in the lake determined the characteristic species composition. Guest Editors: J. John & B. Timms Salt Lake Research: Biodiversity and Conservation—Selected papers from the 9th Conference of the International Society for Salt Lake Research