Seasonal abundance of xerophilic fungi and house-dust mites (Acarida: Pyroglyphidae) in mattress dust

Summary Arthropods and xerophilic fungi in dust from 5 mattresses and air-borne fungi were identified and counted every 4 weeks from January 1976 to October 1977.The arthropod fauna consisted mainly of the pyroglyphid mites Dermatophagoides pteronyssinus (58%) and Euroglyphus maynei (30%). The fungal flora consisted of Aspergillus restrictus (48%), A. glaucus (16%), Wallemia sebi (3%) and Penicillium spp. (25%). Air-borne fungi belonged to the same taxa but in different frequencies, 30, 7, 21 and 27%, respectively. Mattresses differed in quantities of mites and Penicillium.In July 1977, the highest population density of pyroglyphid mites was encountered: 69 specimens/g of dust. In the same month the numbers of A. restrictus rose significantly, reaching a maximum of 3.8×10⁴ diaspores/g of dust. Most air-borne fungi were isolated in the winter period of 1976/1977. No positive correlation was found between the numbers of air-borne and mattress-dust fungi. The summer of 1976 was exceptionally dry resulting in both a premature decline of the mite populations and a low level of A. restrictus diaspores.The seasonal peaks of A. restrictus and pyroglyphid mites correspond and suggest a synergistic cooperation which may result in an increased house-dust allergen production in the environment of asthmatic patients.Supported by grant no. 230 of the Dutch Asthma Foundation     

Canonical correlation between groups of acarine,fungal and environmental variables in bulk grain ecosystems

Interrelations among acarine, fungal, and environmental components of bulk grain ecosystems were determined by canonical correlation analyses. Twenty-seven variables were measured monthly in samples collected from 2 identical grain bulks in a granary in Winnipeg during the years 1959–67. The relationships between 9 kinds of arthropods and 6 environ mental variables, and between the same arthropods and 12 kinds of actinomycetes and fungi were examined. The maximum canonical correlation between arthropods and environmental factors was 0.35, and between arthropods and microorganisms was 0.28; both are highly significant (p<0.001). In the first analysis correlations of the variables with the canonical variates revealed that correlations of the variables with the canonical variates revealed that sampling location, depth, and temperature are the primary environmental antecedents involved, and the criterion is primarily composed of mites Tarsonemus spp.,Tydeus interruptus and the psocid, Lepinotus reticulatus. In the second analysis the fungi Nigrospora sphaerica, Aspergillus spp., and Cochliobolus sativus are involved with the mites Cheyletus eruditus and Acarus siro. Generally, the results of these analyses complement the findings of factor and regression analyses of the same data reported earlier.     

Leaf domatia mediate mutualism between mites and a tropical tree

Although associations between mites and leaf domatia have been widely reported, their consequences for plants, especially for natural tree populations, particularly in the tropics, are largely unknown. In experiments with paired Cupania vernalis (Sapindaceae) saplings in a semi-deciduous forest in south-east Brazil, we blocked leaf domatia to examine their effect: (1) on mites and other arthropods, and (2) on damage caused by fungi and herbivorous arthropods. In general, plants with resin-blocked domatia had fewer predaceous mites on leaves than control plants with unaltered domatia, but the total abundances of fungivorous and of phytophagous mites remained unchanged. However, phytophagous eriophyid mites, the most numerous inhabitants of domatia, decreased on leaf surfaces with the blocking treatment. In a second experiment, treated plants lacking functional domatia developed significantly greater numbers and areas of chlorosis, apparently due to increased eriophyid attacks, whereas fungal attack, epiphyll abundance and leaf-area loss were unaffected. This seems to be the first experimental study to demonstrate that leaf domatia can benefit plants against herbivory in a natural system. The possible stabilizing effect of leaf domatia on predator-prey interactions is discussed.     

Oribatid Mites as Potential Vectors for Soil Microfungi: Study of Mite-Associated Fungal Species

The ability of soil-living oribatid mites to disperse fungal propagules on their bodies was investigated. Classical plating methods were applied to cultivate these fungi and to study their morphology. Molecular markers were used for further determination. The nuclear ribosomal large subunit and the nuclear ribosomal internal transcribed spacer of DNA extracts of the cultured fungi as well as total DNA extracts of the mites themselves, also containing fungal DNA, were amplified and sequenced. Based on phylogenetic analysis, a total of 31 fungal species from major fungal groups were found to be associated with oribatid mites, indicating that mites do not selectively disperse specific species or species groups. The detected taxa were mainly saprobiontic, cosmopolitan (e.g., Alternaria tenuissima), but also parasitic fungi (Beauveria bassiana) for whose dispersal oribatid mites might play an important role. In contrast, no mycorrhizal fungi were detected in association with oribatid mites, indicating that their propagules are dispersed in a different way. In addition, fungi that are known to be a preferred food for oribatid mites such as the Dematiacea were not detected in high numbers. Results of this study point to the potential of oribatid mites to disperse fungal taxa in soil and indicate that co-evolutionary patterns between oribatid mites and their associated fungi might be rare or even missing in most cases, since we only detected ubiquitous taxa attached to the mites.     

Mites as Selective Fungal Carriers in Stored Grain Habitats

Mites are well documented as vectors of micromycetes in stored products. Since their vectoring capacity is low due to their small size, they can be serious vectors only where there is selective transfer of a high load of specific fungal species. Therefore the aim of our work was to find out whether the transfer of fungi is selective. Four kinds of stored seeds (wheat, poppy, lettuce, mustard) infested by storage mites were subjected to mycological analysis. We compared the spectrum of micromycete species isolated from different species of mites (Acarus siro, Lepidoglyphus destructor, Tyrophagus putrescentiae, Caloglyphus rhizoglyphoides and Cheyletus malaccensis) and various kinds of stored seeds. Fungi were separately isolated from (a) the surface of mites, (b) the mites' digestive tract (= faeces), and (c) stored seeds and were then cultivated and determined. The fungal transport via mites is selective. This conclusion is supported by (i) lower numbers of isolated fungal species from mites than from seeds; (ii) lower Shannon–Weaver diversity index in the fungal communities isolated from mites than from seeds; (iii) significant effect of mites/seeds as environmental variables on fungal presence in a redundancy analysis (RDA); (iv) differences in composition of isolated fungi between mite species shown by RDA. The results of our work support the hypothesis that mite–fungal interactions are dependent on mite species. The fungi attractive to mites seem to be dispersed more than others. The selectivity of fungal transport via mites enhances their pest importance.     

Dynamics in the microbiology of maize silage during whole‐season storage

Aims: To monitor seasonal variations in the microbiology of maize silage and to determine whether the risk of fungal spoilage varies during whole‐year storage. Methods and Results: A continuous survey of 20 maize silage stacks was conducted over a period from three to 11 months after ensiling. Filamentous fungi, yeasts and lactic acid bacteria (LAB) were enumerated at five time‐points, and cultivable species of filamentous fungi were identified. Significant differences in the numbers of filamentous fungi, yeast and LAB were detected. The highest numbers of fungi were five to seven and the lowest 11 months after ensiling, while the LAB decreased in numbers during the study. Filamentous fungi were isolated from all stacks at all time‐points. The most abundant toxigenic mould species were Penicillium roqueforti, Penicillium paneum and Aspergillus fumigatus. Conclusions: There are significant variations in the microbiology of maize silage over a whole storage season. The risk of fungal spoilage was highest 5–7 months after ensiling and lowest after 11 months. Significance and Impact of the Study: This information is valuable in the assessment of health risks connected with spoiled maize silage and may be useful in the management of maize silage stacks, when whole‐season storage is applied.     

Diseases of Mites

An overview is given of studies on diseases of mites. Knowledge of diseases of mites is still fragmentary but in recent years more attention has been paid to acaropathogens, often because of the economic importance of many mite species. Most research on mite pathogens concerns studies on fungal pathogens of eriophyoids and spider mites especially. These fungi often play an important role in the regulation of natural mite populations and are sometimes able to decimate populations of phytophagous mites. Studies are being conducted to develop some of these fungi as commercial acaricides.Virus diseases are known in only a few mites, namely, the citrus red mite and the European red mite. In both cases, non-occluded viruses play an important role in the regulation of mite populations in citrus and peach orchards, respectively, but application of these viruses as biological control agents does not seem feasible. A putative iridovirus has been observed in association with Varroa mites in moribund honeybee colonies. The virus is probably also pathogenic for honeybees and may be transmitted to them through this parasitic mite.Few bacteria have been reported as pathogens of the Acari but in recent years research has been concentrated on intracellular organisms such as Wolbachia that may cause distorted sex ratios in offspring and incompatibility between populations. The role of these organisms in natural populations of spider mites is in particular discussed. The effect of Bacillus thuringiensis on mites is also treated in this review, although its mode of action in arthropods is mainly due to the presence of toxins and it is, therefore, not considered to be a pathogen in the true sense of the word.Microsporidia have been observed in several mite species especially in oribatid mites, although other groups of mites may also be affected. In recent years, Microsporidia infections in Phytoseiidae have received considerable attention, as they are often found in mass rearings of beneficial arthropods. They affect the efficacy of these predators as biological control agent of insect and mite pests. Microsporidia do not seem to have potential for biological control of mites.     

Insights into fungal communities colonizing the acarosphere in a forest soil habitat

Knowledge on the diversity and ecology of microfungi associated with soil-dwelling mites is rather limited. To get insights into associations between the two highly diverse groups, we studied composition and potential function of mite-associated fungal communities occurring in soil. Two different mite species living in temperate region pine forest soil were screened for associated fungi. The fungal community was assessed by restriction fragment length polymorphism (RFLP) analyses in a predatory (Leptogamasus obesus) and a predominantly saprobic (Oppiella subpectinata) mite species as well as in the organic soil layer. Key fungi were identified by sequencing, and community composition was exemplarily compared between the RFLP and a 454 metabarcoding approach. Composition of the fungal communities differed between mite species and between mites and organic soil layer. The mites were predominantly associated with Zygomycota, less frequently with Ascomycota, and rarely with Basidiomycota. The bulk soil was colonized by roughly equal proportions of the three phyla. Fungal taxa being known to exhibit chitinolytic activity were predominantly restricted to mites. Compositional and functional differences between the communities suggest that mites represent a particular microhabitat for fungi, the “acarosphere.” This mobile habitat may contribute to nutrient cycling by combining fungal and animal decomposition activities and serve as vector for soil-inhabiting fungi.     

Opportunistic fungi in soils and surface air of a megalopolis (for the Tushino Region,Moscow)

The number and composition of opportunistic microscopic fungi was studied in soils and surface air (0.2 and 1.5 m above the surface) in the megalopolis districts (Tushino, Moscow) of different age of construction (6 and 40 years) and in urban recreational forests. The highest number (up to 1500 CFU/m³) determined by plating from air was found in the summer in new-built quarters. Direct count of fungal diaspores in airborne dust yielded significantly higher values (up to 4 × 10⁵/m³). The composition of the soil fungal population differed significantly from that of the air. In soil, the diversity of potentially pathogenic fungi was higher, while in air, their abundance was greater. The highest content of opportunistic fungi in soil and air was observed in spring and late summer-autumn, respectively. The fungi known as allergenic (mostly Cladosporium spp.) predominate in the air in autumn, especially in the new-built quarters.     

Illumina高通量测序揭示艾比湖湿地6种盐生植物根际土壤真菌群落组成及多样性

【目的】通过研究新疆艾比湖湿地不同盐生植物根际土壤真菌的多样性和群落结构,为艾比湖湿地退化恢复工作和真菌深入研究提供理论支持。【方法】利用高通量测序技术对真菌扩增子ITS1区进行测定,从而分析艾比湖湿地6种盐生植物根际土壤真菌群落多样性,并结合相关土壤理化因子分析环境与真菌群落多样性和丰富度的关联。【结果】艾比湖湿地6种盐生植物根际土壤真菌群落多样性及丰富度存在差异,碱蓬根际土壤真菌多样性最高,芦苇根际土壤真菌群落丰富度最高。真菌群落组成分析表明,土壤样品中真菌菌落主要隶属于子囊菌门(Ascomycota)和担子菌门(Basidiomycota),其中子囊菌门为主要优势菌门;链格孢霉属(Alternaria)是6种植物共有的优势菌属,但是其在不同植物之间的丰度存在差异,在戟叶鹅绒藤中的丰度最高,在准噶尔大戟中的丰度最低。pH与真菌多样性呈显著负相关,全磷(TP)与真菌群落丰富度呈显著正相关,pH、电导率(EC)和有机质(OM)对优势菌属的影响最大。【结论】艾比湖湿地6种盐生植物根际土壤真菌群落组成及多样性具有显著差异,碱蓬和芦苇根际土壤真菌的多样性和丰度高于其他植物,子囊菌门和链格孢霉...     

An arctic community of symbiotic fungi assembled by long‐distance dispersers: phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA

Aim Current evidence from temperate studies suggests that ectomycorrhizal (ECM) fungi require overland routes for migration because of their obligate symbiotic associations with woody plants. Despite their key roles in arctic ecosystems, the phylogenetic diversity and phylogeography of arctic ECM fungi remains little known. Here we assess the phylogenetic diversity of ECM communities in an isolated, formerly glaciated, high arctic archipelago, and provide explanations for their phylogeographic origins. Location Svalbard. Methods We generated and analysed internal transcribed spacer (ITS) nuclear ribosomal DNA sequences from both curated sporocarp collections (from Svalbard) and soil polymerase chain reaction (PCR) clone libraries (from Svalbard and the North American Arctic), compared these with publicly available sequences in GenBank, and estimated the phylogenetic diversity of ECM fungi in Svalbard. In addition, we conducted coalescent analyses to estimate migration rates in selected species. Results Despite Svalbard’s geographic isolation and arctic climate, its ECM fungi are surprisingly diverse, with at least 72 non‐singleton operational taxonomic units (soil) and 109 phylogroups (soil + sporocarp). The most species‐rich genera are Thelephora/Tomentella, Cortinarius and Inocybe, followed by Hebeloma, Russula, Lactarius, Entoloma, Sebacina, Clavulina, Laccaria, Leccinum and Alnicola. Despite the scarcity of available reference data from other arctic regions, the majority of the phylogroups (73.4%) were also found outside Svalbard. At the same time, all putative Svalbard ‘endemics’ were newly sequenced taxa from diverse genera with massive undocumented diversity. Overall, our results support long‐distance dispersal more strongly than vicariance and glacial survival. However, because of the high variation in nucleotide substitution rates among fungi, allopatric persistence since the Pliocene, although unlikely, cannot be statistically rejected. Results from the coalescent analyses suggest recent gene flow among different arctic areas. Main conclusions Our results indicate numerous recent colonization events and suggest that long‐distance, transoceanic dispersal is widespread in arctic ECM fungi, which differs markedly from the currently prevailing view on the dispersal capabilities of ECM fungi. Our molecular evidence indicates that long‐distance dispersal has probably played a major role in the phylogeographic history of some ECM fungi in the Northern Hemisphere. Our results may have implications for studies on the biodiversity, ecology and conservation of arctic fungi in general.     

Mechanisms promoting higher growth rate in arctic than in temperate shorebirds

We compared prefledging growth, energy expenditure, and time budgets in the arctic-breeding red knot (Calidris canutus) to those in temperate shorebirds, to investigate how arctic chicks achieve a high growth rate despite energetic difficulties associated with precocial development in a cold climate. Growth rate of knot chicks was very high compared to other, mainly temperate, shorebirds of their size, but strongly correlated with weather-induced and seasonal variation in availability of invertebrate prey. Red knot chicks sought less parental brooding and foraged more at the same mass and temperature than chicks of three temperate shorebird species studied in The Netherlands. Fast growth and high muscular activity in the cold tundra environment led to high energy expenditure, as measured using doubly labelled water: total metabolised energy over the 18-day prefledging period was 89% above an allometric prediction, and among the highest values reported for birds. A comparative simulation model based on our observations and data for temperate shorebird chicks showed that several factors combine to enable red knots to meet these high energy requirements: (1) the greater cold-hardiness of red knot chicks increases time available for foraging; (2) their fast growth further shortens the period in which chicks depend on brooding; and (3) the 24-h daylight increases potential foraging time, though knots apparently did not make full use of this. These mechanisms buffer the loss of foraging time due to increased need for brooding at arctic temperatures, but not enough to satisfy the high energy requirements without invoking (4) a higher foraging intake rate as an explanation. Since surface-active arthropods were not more abundant in our arctic study site than in a temperate grassland, this may be due to easier detection or capture of prey in the tundra. The model also suggested that the cold-hardiness of red knot chicks is critical in allowing them sufficient feeding time during the first week of life. Chicks hatched just after the peak of prey abundance in mid-July, but their food requirements were maximal at older ages, when arthropods were already declining. Snow cover early in the season prevented a better temporal match between chick energy requirements and food availability, and this may enforce selection for rapid growth.     

Shrub range expansion alters diversity and distribution of soil fungal communities across an alpine elevation gradient

Global climate and land use change are altering plant and soil microbial communities worldwide, particularly in arctic and alpine biomes where warming is accelerated. The widespread expansion of woody shrubs into historically herbaceous alpine plant zones is likely to interact with climate to affect soil microbial community structure and function; however, our understanding of alpine soil ecology remains limited. This study aimed to (i) determine whether the diversity and community composition of soil fungi vary across elevation gradients and to (ii) assess the impact of woody shrub expansion on these patterns. In the White Mountains of California, sagebrush (Artemisia rothrockii) shrubs have been expanding upwards into alpine areas since 1960. In this study, we combined observational field data with a manipulative shrub removal experiment along an elevation transect of alpine shrub expansion. We utilized next‐generation sequencing of the ITS1 region for fungi and joint distribution modelling to tease apart effects of the environment and intracommunity interactions on soil fungi. We found that soil fungal diversity declines and community composition changes with increasing elevation. Both abiotic factors (primarily soil moisture and soil organic C) and woody sagebrush range expansion had significant effects on these patterns. However, fungal diversity and relative abundance had high spatial variation, overwhelming the predictive power of vegetation type, elevation and abiotic soil conditions at the landscape scale. Finally, we observed positive and negative associations among fungal taxa which may be important in structuring community responses to global change.     

Taxonomic and biological trait differences of stream macroinvertebrate communities between mediterranean and temperate regions: implications for future climatic scenarios

Streams in mediterranean regions have highly seasonal discharge patterns, with predictable torrential floods and severe droughts. In contrast, discharge is less variable in temperate regions and intermittent flow conditions are uncommon. Hydroclimatic models predict that climate change would increase frequency and severity of floods and droughts across Europe, thus increasing the proportion of streams with mediterranean characteristics in actually temperate areas. Correspondingly, understanding actual ecological differences between mediterranean and temperate streams may help to anticipate large‐scale ecological impacts of climate change. Given that large‐scale factors determine local community composition, we hypothesized that climatic differences between mediterranean and temperate regions should affect the taxonomic and biological trait composition in streams. We assembled the abundance of stream macroinvertebrate genera of 265 sites each from the Mediterranean Basin and from temperate Europe and linked these abundances to published information on 61 categories of 11 biological traits reflecting the potential of resilience from and resistance to disturbances. Although regional taxonomic richness was higher in the mediterranean than in the temperate region, local taxonomic richness and diversity did not significantly differ between regions. Local trait richness and diversity were significantly higher in the mediterranean region. Both local taxonomic and trait‐community composition differed between regions, but the former varied much more than the latter, highlighting that climate change could produce large changes in the taxonomic but rather weak changes in the trait composition. The mediterranean region was characterized by macroinvertebrates with higher dispersion and colonization capabilities, suggesting that species loss in the temperate region, by extinction or northward emigration of taxa, would be compensated for by immigration of southern mediterranean taxa. Thus, climate change would likely have stronger implications for the local conservation of taxa than for the trait composition of stream macroinvertebrate communities.     

Seasonal variations in numbers,biomass and breeding patterns of dung beettles [Coleoptera: Scarabaeidae] in Southern France

Seasonal variations in numbers and biomass and breeding of 28 species ofScarabaeidae-Scarabaeinae andGeotrupidae were studied at 2 temperate sites and 2 mediterranean sites in southern France in 1978 and 1979, using cattle-dung baited pitfall traps. Maximum dung burial occurred when females were parous and ovipositiong (i.e. during spring at the mediterranean sites and summer at the temperate sites). Using biomass as a measure of dung burial the most important spring active beetles at the mediterranean sites were:Budas bison, B. bubalus, Scarabaeus laticollis, Onthophagus lemur andCopris hispanus, and at the temperate sites:C. lunaris, O. vacca, andO. ovatus. These results confirmed the previous choice ofC. hispanus, C. lunaris, B. bison andO. vacca for introduction into Australia. In addition it is suggested thatB. bubalus, S. laticollis andO. lemur be considered for introduction into mediterranean areas of south western Australia to complement those species already introduced for bush fly control.      

Artificial ground shelters for overwintering phytoseiid mites in orchards

Biological control in orchards strongly depends on winter survival of natural enemies, especially in temperate regions. Predacious phytoseiid mites overwinter on trees or on the ground depending on the characteristics of the species. However, the overwintering ecology of phytoseiid mites on the ground is less well known than that of those on trees. We investigated the usefulness of artificial overwintering shelters as a tool for studying the overwintering ecology of phytoseiid mites on the ground. Four kinds of artificial shelter (shading net, felt, cardboard, and urethane foam) were placed on the ground in an apple orchard in Korea. Two dominant phytoseiid species, Neoseiulus makuwa (Ehara) and N. womersleyi (Schicha) (Acari: Phytoseiidae), overwintered in the artificial ground shelters, and numbers were highest in the urethane foam among the four kinds of shelter, and next highest in the shading net. On the other hand, the numbers of phytoseiid mites collected in the ground vegetation plus soil samples under the ground shelters were not significantly different among the five shelter treatments, including the no-shelter control. Our results suggest that artificial overwintering shelters are efficient tools for investigating overwintering ecology of phytoseiid mites on the ground, as well as on trees, in orchards. Furthermore, the artificial shelters would be good sampling units because they are easily formed into identical sizes and can be used almost anywhere in the field with less laborious work. We also discuss some implications about the effects of sheltered structures on the ground on the populations of phytoseiid mites during winter.     

Community composition of root‐associated fungi in a Quercus‐dominated temperate forest: “codominance” of mycorrhizal and root‐endophytic fungi

In terrestrial ecosystems, plant roots are colonized by various clades of mycorrhizal and endophytic fungi. Focused on the root systems of an oak‐dominated temperate forest in Japan, we used 454 pyrosequencing to explore how phylogenetically diverse fungi constitute an ecological community of multiple ecotypes. In total, 345 operational taxonomic units (OTUs) of fungi were found from 159 terminal‐root samples from 12 plant species occurring in the forest. Due to the dominance of an oak species (Quercus serrata), diverse ectomycorrhizal clades such as Russula, Lactarius, Cortinarius, Tomentella, Amanita, Boletus, and Cenococcum were observed. Unexpectedly, the root‐associated fungal community was dominated by root‐endophytic ascomycetes in Helotiales, Chaetothyriales, and Rhytismatales. Overall, 55.3% of root samples were colonized by both the commonly observed ascomycetes and ectomycorrhizal fungi; 75.0% of the root samples of the dominant Q. serrata were so cocolonized. Overall, this study revealed that root‐associated fungal communities of oak‐dominated temperate forests were dominated not only by ectomycorrhizal fungi but also by diverse root endophytes and that potential ecological interactions between the two ecotypes may be important to understand the complex assembly processes of belowground fungal communities.     

云南三个地区马铃薯内生真菌多样性研究

为研究云南马铃薯(Solanum tuberosum)内生真菌的多样性,该文以采自云南省德宏芒市、大理喜洲和临沧双江3个地区的马铃薯植株为研究对象,采用组织块分离法、尖端菌丝挑取法对马铃薯根、茎及块茎中的内生真菌进行分离纯化,并采用形态学鉴定方法和ITS序列分析法对分离得到的内生真菌进行鉴定,对内生真菌的定殖率、分离率及多样性指数进行计算和分析。结果表明:(1)共分离得到内生真菌98株,其中从德宏芒市的样品中获得40株,从大理喜洲的样品中获得27株,从临沧双江的样品中获得31株。(2)经鉴定,分离得到的马铃薯内生真菌共涵盖10目10科13属,大多为子囊菌门和担子菌门,优势菌为镰刀菌属(Fusarium)和青霉属(Penicillium),褶皱裸孢壳(Emericella rugulosa)、接骨木镰刀菌(Fusarium sambucinum)、毛韧革菌(Stereum hirsutum)、Psathyrella sulcatotuberculosa和Epicoccum catenisporum 5种真菌均为首次从马铃薯植株中分离得到。(3)马铃薯块茎内生真菌的定殖率最高,根部内生真菌定殖率最低; 内生真菌的分离率以马铃薯根部为最高,而茎部最低; 不同组织中内生真菌的多样性指数趋势均为根>块茎>茎。从综合来看,云南马铃薯植株中的内生真菌具有较高的多样性,不同地区的马铃薯样品中内生真菌优势菌不同,马铃薯根部具有最丰富的内生真菌种群和最高的分离率,是最适合进行内生真菌分离的材料。该研究结果为后期探究马铃薯内生真菌对病原菌的拮抗作用奠定了基础,也为马铃薯内生真菌多样性研究提供了参考数据。     

Development of rhizosphere and rhizoplane microflora of Aristida coerulescens in the Libyan desert

Summary Microflora of rhizosphere soil, rhizoplane and macerated root-portions of Aristida coerulescens, naturally occurring in the Libyan desert, were different in count and isolates, in the different root zones. A rhizosphere effect characteristic of each zone is shown. The root base contained the lowest numbers of microflora (bacteria and fungi) whilst the root tip included the highest counts. Distribution of most of the individual fungal species in the different root zones and root-surfaces is given in text.     

Accounting for environmental variation in co‐occurrence modelling reveals the importance of positive interactions in root‐associated fungal communities

Understanding the role of interspecific interactions in shaping ecological communities is one of the central goals in community ecology. In fungal communities, measuring interspecific interactions directly is challenging because these communities are composed of large numbers of species, many of which are unculturable. An indirect way of assessing the role of interspecific interactions in determining community structure is to identify the species co‐occurrences that are not constrained by environmental conditions. In this study, we investigated co‐occurrences among root‐associated fungi, asking whether fungi co‐occur more or less strongly than expected based on the environmental conditions and the host plant species examined. We generated molecular data on root‐associated fungi of five plant species evenly sampled along an elevational gradient at a high arctic site. We analysed the data using a joint species distribution modelling approach that allowed us to identify those co‐occurrences that could be explained by the environmental conditions and the host plant species, as well as those co‐occurrences that remained unexplained and thus more probably reflect interactive associations. Our results indicate that not only negative but also positive interactions play an important role in shaping microbial communities in arctic plant roots. In particular, we found that mycorrhizal fungi are especially prone to positively co‐occur with other fungal species. Our results bring new understanding to the structure of arctic interaction networks by suggesting that interactions among root‐associated fungi are predominantly positive.