A New Species of the Genus Xenophrys(Amphibia: Anura: Megophryidae) from Libo County,Guizhou, China

A new species of the genus Xenophrys is described from a karst cave environment of Libo County, Guizhou Province, Southern China. The new species, Xenophrys liboensis sp. nov., is distinguished from its congeners by a combination of the following characters: 1) tympanum distinct; 2) vomerine teeth present; 3) the length of lower arm and hand larger than the half of snout-vent; 4) heels overlapped slightly when the flexed legs are held at right angles to the body axis; 5) toe tips with rudimentary webs and without grooves; 6) dermal fringes moderate; 7) tubercles on the dorsum forming an X-shaped weak ridge; 8) horn-like tubercle at the edge of the upper eyelid distinct; 9) color of the iris in life is brown. In Bayesian phylogenetic analysis of 22 species of Xenophrys, all the individuals of X. liboensis sp. nov. clustered into a monophyletic clade with high posterior probabilities. In addition, the ranges of genetic divergences of X. liboensis sp. nov. with other species were interspecific rather than intraspecific. Based on the above evidences, we consider that X. liboensis sp. nov. is a valid species in Xenophrys.     

New species of the pleasing lacewing genus Dilar Rambur, 1838 (Neuroptera,Dilaridae) from the Hengduan Mountains,southwestern China

The genus Dilar Rambur, 1838 (Neuroptera, Dilaridae) is the most species-rich genus of the family Dilaridae and is diverse in China, previously with 32 described species. Here we report two new species of Dilar from the southern part of the Hengduan Mountains, Sichuan, southwestern China, namely Dilar muliensis sp. nov. and Dilar punctulosus sp. nov. A revised key to species of Dilar from China is provided.www.zoobank.org/urn:lsid:zoobank.org:pub:27EC214B-6587-4E38-BDAC-295F7389ABF3.     

Two New Species of Liuixalus (Rhacophoridae,Anura): Evidence from Morphological and Molecular Analyses

Due to small body sizes, superficial similarities in morphologies, and obscure activity behaviors, the phylogeny and taxonomy of species in the genus Liuixalus were very troublesome. Some species might comprise a complex of cryptic species. To investigate the species of group, we constructed the matrilineal genealogy of the genus using 16s rRNA mitochondrial DNA sequences. Analyses recovered six well supported matrilines that involved L. romeri, L. ocellatus, L. hainanus, L. calcarius, Liuixalus shiwandashan sp. nov. and Liuixalus jinxiuensis sp. nov., though the historical relationships among them remained unresolved. Currently, Liuixalus included 4 species, distributed eastwards from northern Vietnam to Hong Kong, China. Based on genealogical and morphological distinctiveness, we described Liuixalus jinxiuensis sp. nov. from the type locality Mt. Dayao, Jinxiu, China and Liuixalus shiwandashan sp. nov. from the type locality Mt. Shiwanda, China. A combination of morphological measurements, genetic, bioacoustic and osteological analysis was served to diagnose the new taxa.     

Integrative Taxonomic Approach for Describing a New Cryptic Species of Bush Frog (Raorchestes: Anura: Rhacophoridae) from the Western Ghats,India

A new cryptic species of bush frog Raorchestes honnametti sp. nov. is described from the south-eastern part of the Western Ghats, India. This newly described species belongs to the Charius clade and is morphologically similar to other clade members—R. charius and R. griet. Therefore, an integrative taxonomic approach based on molecular and bioacoustic analysis along with morphology was used to delimit the new species. Raorchestes honnametti sp. nov., is currently known only from Biligiri Rangaswamy Temple Tiger Reserve, a part of Biligiri Rangaswamy horst mountain range (a mountain formed due movement of two faults) formed during the Late Quaternary period (1.8–2.58 Ma). Discovery of cryptic species from a highly speciose and well-studied genus Raorchestes hints at the possible existence of several more cryptic species in this genus. We discuss the possible reasons for crypsis and emphasize the need for continued systematic surveys of amphibians across the Western Ghats.     

Early Miocene cricetids (Rodentia) from the Junggar basin (Xinjiang, China) and their biochronological implications

Among the 14 small mammal species from the early Miocene locality of the northern area of the Junggar basin (northern Xinjiang, China), four species are cricetids (Rodentia): unnamed species of Cricetodon and Eumyarion, and two new species, Karydomys debruijni nov. sp. and Megacricetodon beijiangensis nov. sp. Some aspects of the morphology of Cricetodon sp. are shared by Eucricetodon from the late Oligocene, suggesting that these specimens could be of intermediate form between Eucricetodon and Cricetodon. One tooth of Eumyarion sp. was found, making its determination uncertain, but its morphology is clearly differentiated from the one of Cricetodon sp. The species K. debruijni nov. sp. is established based on its primitive features compared to the species known in Europe and Anatolia, and its specific association of characters compared to Karydomys dzerzhinskii. M. beijiangensis nov. sp. shows many plesiomorphic features compared to the species already described in the middle Miocene of China. Based on both the whole assemblage of rodents and the species of cricetids, the biochronologic position and the age of the locality are discussed. The locality appears to be biochronologically very close to the fauna from the Chul’adyr Formation in Aktau Mountains, but we propose an age slightly older than the one proposed for this fauna, probably equivalent to the MN3 biozone in Europe.     

罗霄山脉翼手目物种多样性及适生区预测

罗霄山脉位于中国大陆东南部, 是一条南北走向的大型山脉, 面积约6.76万km²。该山脉位于欧亚大陆东部季风区, 生物多样性丰富, 是亚洲东部第三纪冰期动物重要的避难所。为了解罗霄山脉翼手目物种多样性状况, 本研究组于2013-2018年, 使用雾网、手网和竖琴网等工具开展了针对性调查与标本采集, 同时运用形态分类学和分子系统发生学方法鉴定物种。根据调查结果并结合文献记载: 罗霄山脉地区现有翼手目物种4科14属40种, 其中罗霄山脉翼手目新记录种25种, 省级翼手目分布新记录种9种。同时, 本研究基于5年的调查采集位点, 使用生物多样 性与气候变化虚拟实验室(the Biodiversity & Climate Change Virtual Laboratory)在线生境预测平台, 对罗霄山脉翼手目物种当前的适生区, 以及3种不同量温室气体排放情景下(representative concentration pathway, RCP 2.6 / 6.0 / 8.5) 2050年的适生区进行预测, 其中随机森林算法(random forest)的模型解释力较优, 其预测结果显示: 影响该区域翼手目分布的主要环境因子为降水季节性和年平均温度; 山脉中部及南部为翼手目的高适生区, 面积约为罗霄山脉的30%; 与当前适生区相比, RCP 2.6情景下2050年该类群适生区有所扩增, RCP 6.0和RCP 8.5情景下均会导致翼手目适生区急剧缩减, 且分布区将迁移至高海拔区域以响应气候变化。而本项目的开展不仅初步掌握了罗霄山脉翼手目物种多样性本底状况, 也为开展后续的翼手目研究和保护管理提供了参考。     

New evidence of cryptic speciation in the family Longidoridae (Nematoda: Dorylaimida)

Longidorid nematodes comprise more than 500 species, and Longidorus and Xiphinema are the most diversified, prevalent, and cosmopolitan genera within plant-parasitic nematodes. This increases the risk of species misidentification. We conducted an integrative morphometric and genetic study on two longidorid species to elucidate the existence of new cases of cryptic speciation within the genera Longidorus and Xiphinema. Detailed morphological, morphometrical, multivariate, and genetic studies were carried out, and mitochondrial and nuclear haploweb analyses were used to differentiate species within the L. iliturgiensis and X. hispanum complexes. Species delimitation using multivariate and haplonet tools of L. iliturgiensis species complex clearly separated L. tabernensis sp. nov. from L. iliturgiensis and L. indalus, and X. subbaetense sp. nov. from X. hispanum and X. adenohystherum. D2-D3, partial 18S, and partial coxI regions were used for inferring their phylogenetic relationships with other species in each genus. The present study provides new insights into the diversity of Longidorus and Xiphinema species detected in southern Spain, and new evidence of cryptic speciation in both genera. These results support our hypothesis that the biodiversity of Longidoridae in southern Europe is higher than previously supposed and is still not fully clarified.     

Diversification of low dispersal crustaceans through mountain uplift: a case study of Gammarus (Amphipoda: Gammaridae) with descriptions of four novel species

Lineages with low dispersal ability are geographically restricted. We used freshwater Gammarus to test this hypothesis. Sequences of two mitochondrial (cytochrome c oxidase subunit I and 16S) and two nuclear (28S and cytosolic heat‐shock protein) genes were obtained for seven species distributed in 28 localities along the Lüliang and Taihang mountains in China. Phylogenetic analyses showed that Gammarus species were grouped into two clades, one from the Lüliang range and the other from the Taihang range. Each clade was further divided into three or four species, showing a congruent pattern with geographical vicariance. Divergence time estimation indicated that the split between the two clades coincided with the uplift of the Taihang Mountains at the boundary of Oligocene/Miocene. Most speciation events may have been driven by massive uplifting of the Lüliang and Taihang mountains from the late Miocene to early Pliocene. Additionally, four new species are described: G ammarus incoercitus sp. nov. , G ammarus benignus sp. nov. , G ammarus monticellus sp. nov. , and G ammarus pisinnus sp. nov. The new species are compared with related species in this area and a key to these species is provided. © 2014 The Linnean Society of London     

New species of spiriferids (Brachiopoda) from the Devonian and Carboniferous of Eastern Europe

In a revision of previously published materials, two new spiriferid species from the Late Tournaisian, Unispirifer subtornacensis sp. nov. and Mesochorispira ussuilensis sp. nov., and Atylephorus nalivkini sp. nov. from the Lytva Horizon of the Upper Devonian of Bashkiria are described. Based on the original collection, a new Serpukhovian subspecies, Podtsheremia duplicicosta triplicicosta, from the southern Ural Mountains and a new Late Carboniferous species, Purdonella kalashnikovi, from the polar Ural Mountains and adjacent islands are established.     

Tabulate Corals after the Frasnian/Famennian Crisis: A Unique Fauna from the Holy Cross Mountains,Poland

Famennian tabulate corals were very rare worldwide, and their biodiversity was relatively low. Here we report a unique tabulate fauna from the mid- and late Famennian of the western part of the Holy Cross Mountains (Kowala and Ostrówka), Poland. We describe eight species (four of them new, namely ?Michelinia vinni sp. nov., Thamnoptychia mistiaeni sp. nov., Syringopora kowalensis sp. nov. and Syringopora hilarowiczi sp. nov.); the whole fauna consists of ten species (two others described in previous papers). These corals form two assemblages—the lower, mid-Famennian with Thamnoptychia and the upper, late Famennian with representatives of genera ?Michelinia, Favosites, Syringopora and ?Yavorskia. The Famennian tabulates from Kowala represent the richest Famennian assemblage appearing after the F/F crisis (these faunas appear some 10 Ma after the extinction event). Corals described here most probably inhabited deeper water settings, near the limit between euphotic and disphotic zones or slightly above. At generic level, these faunas show similarities to other Devonian and Carboniferous faunas, which might suggest their ancestry to at least several Carboniferous lineages. Tabulate faunas described here represent new recruits (the basin of the Holy Cross mountains was not a refuge during the F/F crisis) and have no direct evolutionary linkage to Frasnian faunas from Kowala. The colonization of the seafloor took place in two separate steps: first was monospecific assemblage of Thamnoptychia, and later came the diversified Favosites-Syringopora-Michelinia fauna.     

Molecular-assisted alpha taxonomy of the genus Rhodymenia (Rhodymeniaceae,Rhodymeniales) from Australia reveals overlooked species diversity

A previously published DNA barcode survey of red macroalgae in Australia revealed significant cryptic and overlooked diversity for the genus Rhodymenia with recognition of R. novahollandica, R. prolificans, R. stenoglossa, R. wilsonis and an additional four uncharacterized genetic species groups. Since that study, increased sampling effort in Australia has warranted reassessment and reinvestigation of the number of genetic species groups attributed to Rhodymenia and their respective taxonomic affiliations. Using molecular-assisted alpha taxonomy employing the DNA barcode (COI-5P), the present study resolved 188 Australian specimens in 12 genetic species groups assignable to the genus Rhodymenia. Four of these groups were attributed to the previously recognized species (above), whereas some collections from Lord Howe Island were attributed to the New Zealand species R. novazelandica, expanding its biogeographic range. The following seven genetic groups were inconsistent with existing species of Rhodymenia and established as novel taxa: R. compressa sp. nov., R. contortuplicata sp. nov., R. gladiata sp. nov., R. insularis sp. nov., R. lociperonica sp. nov., R. norfolkensis sp. nov. and R. womersleyi sp. nov. Although morphological and biogeographic features were adequate for distinguishing some species of Rhodymenia from Australia, DNA sequencing in combination with morphology and biogeography provided the most reliable means of identification.     

An Early Ordovician Trilobite assemblage from the Lashkarak Formation, Damghan area, northern Iran

A low diversity Lower Ordovician trilobite assemblage is described from the middle part of the Lashkarak Formation at Simeh-Kuh, northwest of Damghan, northern Iran. Co-occurrence with conodonts of the lowermost Paroistodusproteus Biozone suggests an uppermost Tremadocian age. This assemblage includes four taxa, including one new genus and two new species, Damghanampyxginteri nov. gen. nov. sp. and Asaphellusfecundus nov. sp. The third diagnosable species from the formation is Taihungshaniamiqueli (Bergeron, 1894) which has previously been reported from southern France and the Turkish Taurides, suggesting north Gondwanan faunal affinities.     

Cryptic speciation in Brazilian Epiperipatus (Onychophora: Peripatidae) reveals an underestimated diversity among the peripatid velvet worms

Background

Taxonomical studies of the neotropical Peripatidae (Onychophora, velvet worms) have proven difficult, due to intraspecific variation and uniformity of morphological characters across this onychophoran subgroup. We therefore used molecular approaches, in addition to morphological methods, to explore the diversity of Epiperipatus from the Minas Gerais State of Brazil.

Methodology/Principal Findings

Our analyses revealed three new species. While Epiperipatus diadenoproctus sp. nov. can be distinguished from E. adenocryptus sp. nov. and E. paurognostus sp. nov. based on morphology and specific nucleotide positions in the mitochondrial cytochrome c oxidase subunit I (COI) and small ribosomal subunit RNA gene sequences (12S rRNA), anatomical differences between the two latter species are not evident. However, our phylogenetic analyses of molecular data suggest that they are cryptic species, with high Bayesian posterior probabilities and bootstrap and Bremer support values for each species clade. The sister group relationship of E. adenocryptus sp. nov. and E. paurognostus sp. nov. in our analyses correlates with the remarkable morphological similarity of these two species. To assess the species status of the new species, we performed a statistical parsimony network analysis based on 582 base pairs of the COI gene in our specimens, with the connection probability set to 95%. Our findings revealed no connections between groups of haplotypes, which have been recognized as allopatric lineages in our phylogenetic analyses, thus supporting our suggestion that they are separate species.

Conclusions/Significance

Our findings suggest high cryptic species diversity and endemism among the neotropical Peripatidae and demonstrate that the combination of morphological and molecular approaches is helpful for clarifying the taxonomy and species diversity of this apparently large and diverse onychophoran group.     

Taxonomy of the genus Ectopioglossa Perkins from China,with two new species and an updated key to the Oriental species (Hymenoptera: Vespidae: Eumeninae)

A total of five species of the genus Ectopioglossa is reviewed from China, of which two new species are described and illustrated. These two new species are Ectopioglossa trimacula sp. nov. and E. convexa sp. nov., collected from Guangxi and Yunnan, China, respectively. Among other three nomial species, E. sublaevis (Smith, 1857) is new to China. An updated key to the Oriental species is also provided.     

Xenophyophores (Rhizaria,Foraminifera), including four new species and two new genera,from the western Clarion-Clipperton Zone (abyssal equatorial Pacific)

The Clarion-Clipperton Zone (CCZ) occupies a vast swathe of the Pacific with extensive polymetallic nodule deposits. Eastern and central parts host diverse assemblages of xenophyophores (megafaunal agglutinated foraminifera). Here we describe xenophyophores obtained using a Remotely Operated Vehicle from the western CCZ. Eleven distinct forms include two known species, Stannophyllum zonarium Haeckel, 1888 and Aschemonella monile Gooday and Holzmann in Gooday et al., 2017b. Another four are described as new species based on morphological and genetic data. In Abyssalia foliformis gen. nov., sp. nov. and Abyssalia sphaerica sp. nov. the flattened or spherical test comprises a homogeneous framework of sponge spicules. Psammina tenuis sp. nov. has a delicate, thin, plate-like test. Moanammina semicircularis gen. nov., sp. nov. has a stalked, fan-shaped test and is genetically identical to ‘Galatheammina sp. 6’ of Gooday and co-workers from the eastern CCZ. Sequence data revealed a spherical ‘mudball’, which disintegrated and cannot be formally described, to be a novel xenophyophore. Finally, four morphospecies are represented by dead tests: Psammina spp., Reticulammina sp., and an unknown genus with a unique test structure. This collection enhances our knowledge of Pacific xenophyophore diversity and provides the first genetic confirmation of wide geographic ranges for abyssal species.     

New snakeflies of the genus Inocellia Schneider, 1843 (Raphidioptera: Inocelliidae) from the Hengduan Mountains,China

Three species of the snakefly genus Inocellia Schneider, 1843 (Raphidioptera: Inocelliidae) are reported from the Hengduan Mountains in southwestern China. Among them, Inocellia yulongensis sp. nov. is described as new to science. Inocellia cheni Liu, H. Aspöck, Yang & U. Aspöck, 2010 is first recorded from Sichuan Province based on a newly collected male from a locality over 4200 m a.s.l. Inocellia obtusangularis Liu, H. Aspöck, Yang & U. Aspöck, 2010 is first recorded from Yunnan Province. The rich species diversity of snakeflies and its biogeographic significance from the Hengduan Mountains are discussed.     

DNA barcode reveals candidate species of Scinax and Ololygon (Anura: Hylidae) in Atlantic Forest

Molecular species delimitation methods are efficient tools to identify species, including the discovery of new taxa and cryptic organisms, thus being useful to biodiversity studies. In the present work, 16S mitochondrial sequences and cytochrome oxidase I (COI) were used to evaluate the richness of species in the genus Scinax and Ololygon from a biodiversity hotspot in Atlantic Forest. A total of 109 specimens formally belonging to eight species of Scinax and three species of Ololygon were collected in 13 localities along the state of Bahia (northeastern Brazil) and one site in Espírito Santo (southeastern Brazil). Of the Scinax species collected in this study, three were morphologically differentiated from other described species and identified as putative new species (Scinax sp.1, Scinax sp.2 and Scinax sp.3). The species delimitations were inferred using three different methods: ABGD, PTP and mPTP which allowed recognizing 11 Scinax species and five Ololygon species. Scinax sp. 1, Scinax sp. 2 and Scinax sp. 3, have been confirmed as new putative species and Ololygon argyreornata possibly contains cryptic species. We suggest additional studies, including morphological and bioacoustic data to validate these new putative species.     

Phylogeography of Pinus armandii and Its Relatives: Heterogeneous Contributions of Geography and Climate Changes to the Genetic Differentiation and Diversification of Chinese White Pines

Geographic barriers and Quaternary climate changes are two major forces driving the evolution, speciation, and genetic structuring of extant organisms. In this study, we used Pinus armandii and eleven other Asian white pines (subsection Strobus, subgenus Pinus) to explore the influences of geographic factors and Pleistocene climatic oscillations on species in South China, a region known to be centers of plant endemism and biodiversity hotspots. Range-wide patterns of genetic variation were investigated using chloroplast and mitochondrial DNA markers, with extensive sampling throughout the entire range of P. armandii. Both cpDNA and mtDNA revealed that P. armandii exhibits high levels of genetic diversity and significant population differentiation. Three geographically distinct subdivisions corresponding to the Qinling-Daba Mountains (QDM), Himalaya-Hengduan Mountains (HHM) and Yungui Plateau (YGP) were revealed in mainland China by cpDNA. Their break zone was located in the southeastern margin of the Qinghai-Tibetan Plateau (QTP). A series of massive mountains, induced by the QTP uplift, imposed significant geographic barriers to genetic exchange. The disjunct distribution patterns of ancestral haplotypes suggest that a large continuous population of the white pines may have existed from southwest to subtropical China. Repeated range shifts in response to the Pleistocene glaciations led to the isolation and diversification of the subtropical species. The two Taiwanese white pines share a common ancestor with the species in mainland China and obtain their chloroplasts via long-distance pollen dispersal from North Asian pines. Distinct genetic patterns were detected in populations from the Qinling-Daba Mountains, Yungui Plateau, Himalaya-Hengduan Mountains, and subtropical China, indicating significant contributions of geographic factors to the genetic differentiation in white pines. Our study depicts a clear picture of the evolutionary history of Chinese white pines and highlights the heterogeneous contributions of geography and Pleistocene climatic fluctuations to the extremely high plant species diversity and endemism in South China.     

Geographical distribution patterns of Metaeuchromius in Asia and description of a new species from China (Lepidoptera,Crambidae)

The geographical distribution patterns of Asian Metaeuchromius are analysed with MaxEnt and ArcGIS based on known localities and nineteen environmental variables. The results suggest that the most highly suitable area of the genus located in southeastern China. Precipitation of the warmest quarter (Bio18) and temperature seasonality (Bio4) are the most significant variables affecting geographical distribution Metaeuchromius. Furthermore, a new species from Jiangxi Province, southeast China is added to the genus, Metaeuchromius grandispinata Li, sp. nov. Its habitus, tympanic organs and genitalia are illustrated, and two maps showing geographical distribution patterns of Metaeuchromius in Asia are provided.