Phenotypic and genotypic characterization of competitive exclusion products for use in poultry

AIMS: Phenotypic and genotypic bacteria identification methods were compared for their efficacy in determining the composition of competitive exclusion (CE) products. METHODS AND RESULTS: Phenotypic methods used for bacterial identification were fatty acid methyl ester profiles, biochemical assays and carbohydrate utilization profiles. Genotypic methods were MicroSeq16S rRNA sequence analysis and BLAST searches of the GenBank sequence database. Agreement between phenotypic and genotypic methods for identification of bacteria isolated from the Preempt CE product was 20%. A defined test mixture of bacteria was identified to the species level 100% by BLAST analysis, 64% by MicroSeq and 36% by phenotypic techniques. CONCLUSIONS: The wide range of facultative and obligate anaerobic bacteria present in a CE product are more accurately identified with 16S rRNA sequence analyses than with phenotypic identification techniques. SIGNIFICANCE AND IMPACT OF THE STUDY: These results will provide guidelines for manufacturers of CE products to submit more reliable product information for market approval by regulatory agencies.     

Comparison of cardiopulmonary responses to two types of dry-land upper-body exercise testing modes in competitive swimmers

In this study we compared cardiopulmonary responses to upper-body exercise in 12 swimmers, using simulation of the front-crawl arm-pulling action on a computer-interfaced isokinetic swim bench and arm cranking on a modified cycle ergometer. Subjects adopted a prone posture; exercise was initially set at 20 W and subsequently increased by 10 W. min(-1). The tests were performed in a randomised order at the same time of day, within 72 h. The highest (peak) oxygen consumption (VO(2peak)), heart rate (HR(peak)), blood lactate ([la(-)](peak)) and exercise intensity (EI(peak)) were recorded at exhaustion. Mean (SEM) peak responses to simulated swimming were higher than those to arm cranking for VO(2peak) [2.9 (0.2) vs 2.4 (0.1) l x min(-1); P = 0.01], HR(peak) [174 (2) vs 161 (2) beats x min(-1); P = 0.03], and EI(peak) [122 (6) vs 102 (5) W; P = 0.02]. However, there were no significant differences in [la(-)](peak) [9.6 (0.6) vs 8.2 (0.6) mmol x l(-1); P = 0.08]. Thus simulated swimming is the preferred form of dry-land ergometry for the assessment of swimmers.     

荒漠草原两种类型土壤的水分动态对比

基于2017—2018年的定位监测数据,分析了宁夏东部的盐池荒漠草原2种不同类型土壤(灰钙土和风沙土)的水分时空动态特征。结果表明:2017和2018年生长季(5—10月),研究区降雨量分别为208.2和274.8 mm,降雨在各月份的分配差异较大。2018年除5月存在极端降雨事件(129.6 mm)外,其余各月降雨量均低于2017年。土壤水分变化的季节动态规律大致可以分为两个阶段:土壤水分补偿期(5月初至6月初)和土壤水分波动期(6月中旬至9月底)。0～20 cm土层土壤含水量在降雨后呈骤增骤减的脉冲式特点,深层土壤含水量较稳定。灰钙土土壤含水量随土层加深表现为"升-降-升"的变化,风沙土土壤含水量在0～60 cm土层出现井喷式增加,而后增加缓慢,但随着土层深度的增加土壤含水量逐渐增大。2017年,灰钙土全剖面(0～100 cm)土壤水分表现为积累型,风沙土表现为消耗型;2018年,两种类型的土壤水分在全剖面均表现为消耗型。两种土壤类型土壤水分的时间稳定性随土壤深度的增加而增强,灰钙土和风沙土全剖面的平均土壤含水量代表性土层分别为80～100和40～60 cm。2种类型土壤的土壤水分...     

On the competitive exclusion principle

The Competitive Exclusion Principle, formulated by V. Volterra (Memorie del R. Comitato Talassografico Italiano,131, 1–142, 1927) for a number of species competing for a common ecological niche, is extended to a number of species competing for many ecological niches. Supported by an N.I.H. training grant.     

Aggregation and the competitive exclusion principle

A mathematical model for aggregation in a single animal population is set up. It relies on two premises. First, there is an advantage to individuals in the population in grouping together, for example for social purposes or to reduce the risk of predation. Second, the intra-specific competition at a point depends not simply on the population density at that point but on the average population density near the point, since the animals may move to find resources. The model is then extended to competing populations, and inter-specific competition is also assumed to depend on an average population density. It is shown that the resulting aggregation may lead to the co-existence of populations one of which would otherwise be excluded by the other. This finding is discussed with regard to the Competitive Exclusion Principle.     

Phylogenetic limiting similarity and competitive exclusion

One of the oldest ecological hypotheses, proposed by Darwin, suggests that the struggle for existence is stronger between more closely related species. Despite its long history, the validity of this phylogenetic limiting similarity hypothesis has rarely been examined. Here we provided a formal experimental test of the hypothesis using pairs of bacterivorous protist species in a multigenerational experiment. Consistent with the hypothesis, both the frequency and tempo of competitive exclusion, and the reduction in the abundance of inferior competitors, increased with increasing phylogenetic relatedness of the competing species. These results were linked to protist mouth size, a trait potentially related to resource use, exhibiting a significant phylogenetic signal. The likelihood of coexistence, however, was better predicted by phylogenetic relatedness than trait similarity of the competing species. Our results support phylogenetic relatedness as a useful predictor of the outcomes of competitive interactions in ecological communities.     

Comparison of two methods for quality assessment of macroalgae assemblages,under different pollution types

The selection of adequate methodologies for the assessment of different biological quality elements is urgently needed for the application of the water framework directive (WFD 2000/60/EEC). In the case of macroalgae in coastal waters of the North East Atlantic, two methodologies have been proposed: the reduced species list (RSL) index and the quality of rocky bottoms (CFR) index. Both methods use multimetric approaches to evaluate the quality of macroalgae assemblages, which are based on community characteristics (species/populations richness, cover, percentage of opportunistic species, ecological state groups ratio, etc.). In this paper the results of applying both indices on three different types of pollution gradients in the North coast of Spain (bay of Biscay) are presented, in order to test their usefulness and intercalibration possibilities. In general terms, the CFR index responded more accurately than the RSL index to the pollution gradients under study. With respect to the indicators used in the current evaluation, richness, opportunistic species and cover seemed to be the most accurate for quality assessment of macroalgal communities. While the first two indicators are taken into account in both indices, the latter (cover) is only considered in the CFR index, even though the abundance of macroalgae is one of the aspects to be included in the evaluation of this biological element, according to the WFD.     

Comparison between two types of pertussis vaccines]

We have produced pertussis vaccines with laboratory and industrial methods. The characteristic of laboratory cultivation of microorganisms is, in this context, growth on Hornibrook medium in low form flask and in stationary culture. Industrial cultivation is done in homogenous culture on a B-2 medium in fermentor. The strains utilized were isolated from whooping-cough cases in the Montreal region. The yield (org. x 10(9)/ml) obtained with an industrial cultivation of B. pertussis was 4 to 7 times higher than that reached with a laboratory cultivation of this microorganism. The non-toxicity as expressed in weight gain of mice was shown for both types of vaccine. The vaccines produced in fermentor were less histamino sensibilizing for mice than the one produced in stationary flash culture. The quality of the vaccines achieved by industrial method is easily reproducible due to the fact that enough variables can be measured.     

Species-level selection reduces selfishness through competitive exclusion

Adaptation does not necessarily lead to traits which are optimal for the population. This is because selection is often the strongest at the individual or gene level. The evolution of selfishness can lead to a 'tragedy of the commons', where traits such as aggression or social cheating reduce population size and may lead to extinction. This suggests that species-level selection will result whenever species differ in the incentive to be selfish. We explore this idea in a simple model that combines individual-level selection with ecology in two interacting species. Our model is not influenced by kin or trait-group selection. We find that individual selection in combination with competitive exclusion greatly increases the likelihood that selfish species go extinct. A simple example of this would be a vertebrate species that invests heavily into squabbles over breeding sites, which is then excluded by a species that invests more into direct reproduction. A multispecies simulation shows that these extinctions result in communities containing species that are much less selfish. Our results suggest that species-level selection and community dynamics play an important role in regulating the intensity of conflicts in natural populations.     

A competitive exclusion principle for pathogen virulence

For a modified Anderson and May model of host parasite dynamics it is shown that infections of different levels of virulence die out asymptotically except those that optimize the basic reproductive rate of the causative parasite. The result holds under the assumption that infection with one strain of parasite precludes additional infections with other strains. Technically, the model includes an environmental carrying capacity for the host. A threshold condition is derived which decides whether or not the parasites persist in the host population.Supported by a Heisenberg scholarship of Deutsche Forschungsgemeinschaft     

Frequency-dependent assistance as a way out of competitive exclusion between two strains of an emerging virus

Biological invasions are the main causes of emerging viral diseases and they favour the co-occurrence of multiple species or strains in the same environment. Depending on the nature of the interaction, co-occurrence can lead to competitive exclusion or coexistence. The successive fortuitous introductions of two strains of Tomato yellow leaf curl virus (TYLCV-Mld and TYLCV-IL) in Réunion Island provided an ideal opportunity to study the invasion of, and competition between, these worldwide emerging pathogens. During a 7-year field survey, we observed a displacement of the resident TYLCV-Mld by the newcomer TYLCV-IL, with TYLCV-Mld remaining mostly in co-infected plants. To understand the factors associated with this partial displacement, biological traits related to fitness were measured. The better ecological aptitude of TYLCV-IL in single infections was demonstrated, which explains its rapid spread. However, we demonstrate that the relative fitness of virus strains can drastically change between single infections and co-infections. An epidemiological model parametrized with our experimental data predicts that the two strains will coexist in the long run through assistance by the fitter strain. This rare case of unilateral facilitation between two pathogens leads to frequency-dependent selection and maintenance of the less fit strain.     

The present status of the competitive exclusion principle

Since Darwin accepted the Malthusian population theory to solve the demographic problems he thought to be logically connected with the universal operation of natural selection, the numerical processes in both populations and communities were generally supposed to be governed by competition. For interspecific relations this found expression in the 'competitive exclusion principle'. After it was shown that coexistence rather than exclusion of closely related species is the rule, this principle gradually changed into the 'competitive niche shift principle'. Recently the universality of competition has been increasingly questioned, so that other interspecific relationships (especially predation) are revaluated as possibly governing many natural population and inter-population processes.     

Temperature mediates competitive exclusion and diversity in benthic microalgae under different N:P stoichiometry

The dependence of competitive interactions on abiotic conditions is attracting increasing interest in the face of globally rising temperatures and altered biogeochemical cycles of major nutrients. In a microcosm experiment involving a natural inoculum of benthic microalgae, temperature and nutrient supply ratios were manipulated in order to test three main hypotheses: (1) temperature and nutrient supply ratios determine species composition and diversity of the assemblage, (2) the identity of the dominating species depends on nutrient supply and temperature, and (3) higher temperature leads to faster competitive exclusion and thus more rapid decline in species richness. Over a period of 7 weeks, algal biomass reached an equilibrium carrying capacity, with was higher at colder temperatures and intermediate N:P supply ratios (N:P = 16). Initial growth rate increased with temperature and under high P-supply. Species richness in the stationary phase of the experiment decreased with increasing temperature, reflecting a higher extinction rate in the warmer treatments, which were also characterized by higher dominance of single species. Thus, increasing temperature both altered the identity of the dominating species and accelerated competitive displacement. This experiment thus indicates that warming might influence outcome and temporal dynamics in species interactions, and thereby eventually local diversity.     

Allelopathy prevents competitive exclusion and promotes phytoplankton biodiversity

It has been hypothesized that allelopathy can prevent competitive exclusion and promote phytoplankton diversity in aquatic ecosystems, where numerous species coexist on a limited number of resources. However, experimental proof‐of‐principle is not available to support this hypothesis. Here we present the first experimental evidence to support this hypothesis by demonstrating that allelopathy promotes the coexistence of two phytoplankton species, Ankistrodesmus falcatus and Oscillatoria sp., that compete for a single limiting nutrient. By performing long‐term competition experiments in nitrate‐limited continuous cultures, and by describing the population dynamics using a mechanistic model, we demonstrate that when allelopathy comes into play, one of the following outcomes is possible depending on the relative initial abundances of the species: dominance of the stronger competitor for nitrate (the non‐allelopathic species), oscillatory coexistence, or dominance of the weaker competitor (the allelopathic species). Our model analysis revealed that sustained oscillatory coexistence of the two species would be a common outcome of this experiment. Our study confirms for the first time, based on laboratory experiments combined with mechanistic models, that allelopathy can alter the predicted outcome of inter‐specific competition in a nutrient‐limited environment and increase the potential for the coexistence of more species than resources, thereby contributing to the identification of endogenous mechanisms that explain the extreme diversity of phytoplankton communities.     

Mutual exclusion versus coexistence for discrete competitive systems

Using discrete competition models where the density dependent growth functions are either all exponential or all rational, notwithstanding the complex interactions of the species, we establish an exclusion principle. Moreover, in a 2-species discrete competition model where the growth functions are exponential and rational, an example is given illustrating coexistence when our conditions are satisfied. We obtain an exclusion principle for this 2-species model for some choice of parameters.Research partially supported by funds provided by a Science and Education Grant to the USDA-Forest Service, Southeastern Forest Experiment Station, Population Genetics of Forest Trees Research Unit, Raleigh, North Carolina