Cellulose-decomposing fungi of barley grains in Egypt

100 species and 2 varieties of A. nidulans which belong to 35 genera were identified from 40 samples of barley collected from different places in Upper Egypt. Two methods of isolation were used: the grain-and the dilution plate. The spectrum of fungal genera and species collected by the former (35 genera, 96 species+1 variety) was broader than by the latter method (28 genera, 76 species+1 variety). Nine genera were of high occurrence (represented in more than 50% of the samples) namely, Aspergillus, Penicillium, Fusarium, Alternaria, Chaetomium, Cladosporium, Humicola, Drechslera and Myrothecium. The most frequent species were A. fumigatus, A. niger, A. flavus, A. sydowii, F. oxysporum, F. moniliforme, A. alternata, M. verrucaria, P. funiculosum, P. corylophilum, P. duclauxi, C. herbarum, C. globosum, D. spicifera and H. grisea. Several fungi such as Chaetomium, Humicola, Altemaria, Drechslera, Stachybotrys, Myrothecium, Pénicillium corylophilum and P. funiculosum were far more frequently recovered on cellulose than on glucose agar.     

Studies on mycoflora of salt marshes in Egypt. i. sugar fungi

Thirty-four genera and 92 species, in addition to two varieties of Aspergillus nidulans, were isolated from 74 soil samples collected from different localities of salt marshes in Egypt. Aspergillus (17 species in addition to 2 varieties of A. nidulans) and Penicillium (17 species) were of high occurrence, from which A. niger, A. fumigatus, A. terreus and P. notatum were dominant. Five genera were of moderate occurrence and these were Cladosporium, Fusarium, Alternaria, Mucor and Rhizopus. Nine genera were of low occurrence, namely, Drechslera, ?Trimmatostroma, Paecilomyces, Stachybotrys, Cephalosporium, Humicola, Botryotrichum, ? Geolegnia and Scopulariopsis. Statistical analyses reveal that soil samples poor in total fungi were significantly higher in total soluble salts, Na and K content than samples with numerous fungi. The difference in organic matter content between poor and rich samples was non-significant. In newly reclaimed fields along the borders of salt marshes, Fusarium was the most numerous fungal genera from soil followed by Aspergillus whereas Cladosporium was completely absent. Comparison between the present results and those of the other studies showed that there is no fungal flora characteristic of salt marshes.     

Studies on mycoflora of salt marshes in Egypt. IV=osmophilic fungi

Ninety-five species and seven varieties which belong to thirty-nine genera were isolated from 74 soil samples from salt marshes. At 28°C, on 30% sucrose Czapek's agar, ninety species and four varieties which belong to thirty-six genera were encountered, from which A. niger, A. fumigatus A. terreus and P. notatum were the most frequent. On 60% sucrose Czapek's agar, sixty-three species and three varieties were recovered which belong to twenty-five genera, from which A. niger, A. fumigatus, Cladosporium herbarum and A. terreus were the most frequent.At 45°C, on 30% sucrose, sixteen species and four varieties were identified, but on 60% sucrose, fourteen species and three varieties were isolated. A. fumigatus and A. niger were the most frequent on both sucrose concentrations.The results reveal that the soil samples poor in total osmophilic fungi (at 28°C) were significantly higher in their content of total soluble salts, Na and K and significantly lower in the average number of species per soil samples than the rich ones; the difference was nonsignificant in case of organic matter.     

Osmophilous fungi in the salt marshes of Kuwait.

During an investigation of the mycoflora inhabiting saline soils in Kuwait, special attention was focused on osmophilous fungi. A total of 101 species belonging to 46 genera were encountered from 40 soil samples collected from salt marshes using Czapek's agar supplemented with 40% sucrose. Soil samples were collected from different habitats at different distances from the water edge. Soils near to the water edge were poor in their fungal content, while those taken from areas covered by Juncus arabicus contained highest fungal populations. The recorded genera were classified as follows: 7 were of high frequency of occurrence, 8 moderate, 17 low, and 13 were rare. The order of dominance was Aspergillus, Alternaria, Penicillium, Cephalosporium, Fusarium, Stachybotrys, and Drechslera. Comparison between our results and those in other studies showed that there is no fungal flora characteristic of saline soils.     

Biodiversity of arbuscular mycorrhizal fungi in roots and soils of two salt marshes

The occurrence of arbuscular mycorrhizal fungi (AMF) was assessed by both morphological and molecular criteria in two salt marshes: (i) a NaCl site of the island Terschelling, Atlantic Coast, the Netherlands and (ii) a K₂CO₃ marsh at Schreyahn, Northern Germany. The overall biodiversity of AMF, based on sequence analysis, was comparably low in roots at both sites. However, the morphological spore analyses from soil samples of both sites exhibited a higher AMF biodiversity. Glomus geosporum was the only fungus of the Glomerales that was detected both as spores in soil samples and in roots of the AMF-colonized salt plants Aster tripolium and Puccinellia sp. at both saline sites and on all sampling dates (one exception). In roots, sequences of Glomus intraradices prevailed, but this fungus could not be identified unambiguously from DNA of soil spores. Likewise, Glomus sp. uncultured, only deposited as sequence in the database, was widely detected by DNA sequencing in root samples. All attempts to obtain the corresponding sequences from spores isolated from soil samples failed consistently. A small sized Archaeospora sp. was detected, either/or by morphological and molecular analyses, in roots or soil spores, in dead AMF spores or orobatid mites. The study noted inconsistencies between morphological characterization and identification by DNA sequencing of the 5.8S rDNA-ITS2 region or part of the 18S rDNA gene. The distribution of AMF unlikely followed the salt gradient at both sites, in contrast to the zone formation of plant species. Zygotes of the alga Vaucheria erythrospora (Xanthophyceae) were retrieved and should not be misidentified with AMF spores.     

Cellulose-decomposing fungi of desert soils in Saudi Arabia

Seventy-five species in addition to 5 varieties of cellulose-decomposing which belong to 27 genera were collected during this investigation. Aspergillus (12 species + 4 varieties), Alternaria (4 species), Stachybotrys (3 species + 1 variety), and Penicillium (12 species) were of high frequency of occurrence, of which A. fumigatus, A. niger, A. terreus, A. alternata, A. tenuissima, S. atra, P. citrinum and P. corylophilum were the most common. Six genera were of moderate frequency and these were Botryotrichum (2 species), Macrophomina (1 species), Drechslera (5 species), Ulocladium (4 species), Chaetomium (7 species) and Curvularia (4 species) of which B. atrogriseum, D. spicifera, D. sativus, Ubotrytis, C. spirale and C. lunata were the most prevalent. Five and twelve genera were recovered on cellulose-Czapek's agar plates in low and rare frequency of occurrence, respectively.     

Mycoflora and mycotoxins of peanut (Arachis hypogaea L.) seeds in Egypt. III. Cellulose-decomposing and mycotoxin-producing fungi

From 40 peanut seed samples collected in Egypt, forty-three species and one variety of fungi, belonging to 16 genera, were collected. The most dominant genera were Aspergillus (11 species + one variety), Penicillium (11 species) and Fusarium (4 species). From the preceding genera A. fumigatus, A. flavus, A. niger, P. chrysogenum and F. oxysporum were the most frequent species.Forty-nine isolates belonging to 12 species and one variety were tested for production of mycotoxins, after growth on liquid medium containing two carbon sources (sucrose or cellulose). Thin layer chromatographic analysis revealed that the quality and quantity of mycotoxins was higher on sucrose than cellulose. Mycotoxins identified were aflatoxins B₁, B₂, G₁ & G₂, citrinin; fumagillin; diacetoxyscirpenol T-2 toxin; satratoxin H; and zearalenone.     

Nucleation and facilitation in salt pans in Mediterranean salt marshes

Abstract. Arthrocnemum macrostachyum is a perennial species acting as a primary colonizer of salt pans in Mediterranean high salt marshes. Salicornia ramosissima, an annual, occurs in salt pans under Arthrocnemum canopies and in open areas. The aim of this study was to analyse, in wild populations and a transplant experiment, how S. ramosissima population dynamics and growth are affected by A. macrostachyum. The environmental conditions within the patches of Arthrocnemum were less stressful than in the open areas, with lower radiation levels and salinity concentrations. In the inner areas of A. macrostachyum patches, density‐dependent mortality processes of S. ramosissima seedlings led to low densities of adult individuals with greater morphological development and reproductive success than in open areas. However, at the edges of Arthrocnemum patches facilitation of seedling survival favoured high densities. Environmental stress hindered development, decreased reproduction and premature death. These results are in agreement with the general theory of factors controlling vegetation distribution that biotic interactions dominate in low stress environments, while abiotic interactions dominate under harsher environmental conditions. A. macrostachyum plays an essential role in the succession in these salt pans, facilitating seed production and stimulating nucleation processes in S. ramosissima.     

Restoration of salt marshes in the Netherlands

The conquest of land from the sea has been a long tradition in the Netherlands. When salt marshes were high enough, they were embanked when it was economically feasible, and transformed into intensively exploited agricultural land. This resulted in the transformation of halophytic communities to glycophytic communities. Often as an alternative, a low levee, a summerdike was built, which greatly reduced the flooding frequency of the landward summerpolder, hence creating a sedimentation deficit therein. Such summerpolders now cover 1200 ha in the Netherlands, 2100 ha in NW-Germany and small areas in England. Due to continuous embankments, the present salt-marsh area is relatively small with respect to the tidal basins. Discussions have been started how to increase the salt-marsh area. Two options will be discussed, firstly de-embankment of summerpolders and maintenance of the protective seawall, secondly increase of the effects of saline seepage behind the seawall by top soil removal. Both options include the restoration of salt-marsh communities (target communities) in intensively agriculturally exploited sites that have been salt marshes before. From the few examples abroad and experiments it is discussed (1) to which extent the sedimentation deficit in summerpolders could be compensated for, (2) if the soil seed bank is likely to contribute to re-establishment of salt-marsh communities, (3) if the dispersal of propagules of halophytic plants will be possible by hydrochory when the summerdike is breached, (4) to what extent is dispersal by endozoochory through waterfowl important in case re-establishment in a saline seepage area behind the seawall without open connection to the sea is envisaged. Two case studies of de-embanked summerpolders in the Netherlands revealed that the sedimentation deficit can be counteracted by rapid sedimentation, provided enough transport is possible from the foreshore. Dispersal by incoming tidal water from the nearby salt-marsh source area into the target area is possible for many salt-marsh plant species. The rate of success seems to depend on the relative position of source area and target area. A case study in a saline seepage area after top soil removal in the Netherlands, showed that the number of viable seeds dispersed by droppings from waterfowl is limited. Hence the possibilities for restoration of inland halophytic plant communities seem much lower than after de-embankment of summerpolders.     

Mobile dunes and eroding salt marshes

The paper deals with general outlines of salt marsh and dune vegetation in the Ellenbogen and Listland area on Sylt (Schleswig-Holstein, FRG). The composition of current salt marsh vegetation is considered to be mainly the result of a long-lasting process of tidal inundation, grazing, and a permanent influence of groundwater seepage from the surrounding dunes. The lower salt marsh communities have shown constancy for 67 years, due to the effect of heavy grazing. The mid-upper salt marsh communities demonstrated a succession from aPuccinellia maritima-dominated community of the lower marsh to aJuncus gerardii-dominated community of the mid-upper salt marsh, which may be due to the transport of sand — over a short time — on the surface of the marsh. The area covered by plant communities of annuals below Mean High Water (MHW) seemed to diminish. Salt marsh soils, especially of the mid-upper marsh, indicate sandy layers resulting from sand drift of the dunes. Dry and wet successional series of the dunes in the Listland/Ellenbogen area both show grassy stages shifting to dwarf shrubs as final stages. White primary dunes can only be found on the accreting shoreline of the Ellenbogen, which is also grazed by sheep; vegetation cover therefore remains dominated by grasses, mosses and lichens. Three mobile dunes (as the most prominent features of this landscape) have been left unaffected by seeding and planting by local authorities. Grazing is considered to be an inadequate tool in nature conservation as long as natural processes are to prevail in the landscape as major determinants.     

Zonation of shrubs in western Atlantic salt marshes

We explored the generality of the processes mediating shrub zonation in western Atlantic salt marshes by comparing the results of our experiments in Georgia, USA with previous studies from Rhode Island, USA. The shrub Borrichia frutescens dominates the terrestrial border of many Georgia salt marshes. Within the shrub zone, physical stress increased at lower elevations, shrubs at lower elevations were stunted, and experimentally reducing physical stress reduced shrub stunting. Below the shrub zone, physical stress increased further, and the grass Spartina alterniflora dominated. Transplant and neighbor-removal experiments indicated that the lower border of the shrub zone was set more by physical stress than by competition, but that the upper border of the grass zone was set primarily by competition with shrubs. Laboratory experiments indicated that S. alterniflora seedlings survived best and shrub seedlings worst in the flooded, salty treatment that mimicked low-marsh conditions. These processes are similar to those maintaining zonation patterns between the shrub Iva frutescens and the rush Juncus gerardi in Rhode Island salt marshes. However, markedly different processes appear to occur further to the north, where woody shrubs are absent from coastal marshes, and further to the south, where woody plants (mangroves) dominate coastal wetlands.     

Ecosystem engineers activate mycorrhizal mutualism in salt marshes

Theory predicts that ecosystem engineers should have their most dramatic effects when they enable species, through habitat amelioration, to live in zones where physical and biological conditions would otherwise suppress or limit them. Mutualisms between mycorrhizal fungi and plants are key determinants of productivity and biodiversity in most terrestrial systems, but are thought to be unimportant in wetlands because anoxic sediments exclude fungal symbionts. Our field surveys revealed arbuscular mycorrhizal associations on salt marsh plant roots, but only in the presence of crabs that oxygenate soils as a by-product of burrowing. Field experiments demonstrate that fungal colonization is dependent on crab burrowing and responsible for nearly 35% of plant growth. These results highlight ecosystem engineers as ecological linchpins that can activate and maintain key mutualisms between species. Our findings align salt marshes with other important biogenic habitats whose productivity is reliant on mutualisms between the primary foundation species and micro-organisms.     

Below-ground biomass in healthy and impaired salt marshes

Twelve salt marshes in south Louisiana (USA) were classified as either impaired or healthy before a summer sample collection of above- and below-ground biomass and determination of sediment accretion rates. The above-ground biomass of plant tissues was the same at both impaired and healthy salt marshes and was not a good predictor of marsh health. However, below-ground root biomass in the upper 30cm was much lower in the impaired marshes compared to the healthy marshes. Compromises to root production apparently occur before there is an obvious consequence to the above-ground biomass, which may quickly collapse before remedial action can be taken. The subsequent change in vertical position of the marsh surface may be equivalent to many years of accretion, and be irreversible within decades without considerable effort. These results are consistent with the hypothesis that it is the plants below-ground accumulation of organic matter, not inorganic matter that governs the maintenance of salt marsh ecosystem in the vertical plane. Reversing the precursor conditions leading to marsh stress before the collapse of the above-ground biomass occurs is therefore a prudent management objective and could be easier than restoration.     

Manganese as an ecological factor in salt marshes

The plant available manganese concentration (Mn²⁺) of salt-marsh sediments was compared to that of acidic and neutral soils. The mean soil-manganese concentration was higher in the top 1 cm of salt-marsh soil than in the neutral soil and comparable to that of the acidic soil (0–5 cm). A peak in the soil-manganese concentration in the upper marsh was observed one week after the spring tide but this effect was not evident in the lower marsh. Despite these differences, there was no correlation between mean manganese concentration and position on the marsh.The response to manganese of salt-marsh halophytes was studied by measuring growth and root elongation in a range of Mn²⁺ concentrations with and without sodium chloride. Although there was a differential response to manganese between salt-marsh species, manganese resistance was not related to position on the marsh. Most of the species investigated were tolerant of Mn²⁺ at concentrations higher than normally recommended for plant growth. Moreover a salt-marsh ecotype of Festuca rubra was found to have a higher manganese resistance than an inland ecotype of the same species.When sodium chloride was included in the growth medium, salt-marsh plants had a greatly increased resistance to manganese associated with a reduced uptake. This effect is reflected in the tissue-manganese concentration which was lower than in Deschampsia flexuosa although both groups of plants were exposed to a similar range of Mn²⁺ concentrations. It is concluded that sodium chloride markedly reduces the phytotoxicity of manganese in salt marshes.Nomenclature following Clapham, Tutin & Warburg (1968). Flora of the British Isles.The work was carried out while one of us (C. E. Singer) was in receipt of an SERC studentship, which is gratefully acknowledged.     

Keratinolytic fungi of wadi Qena in Egypt

Forty-six soil samples collected from different sites of wadi Qena were examined for keratinophilic fungi using the hair baiting technique. Thirty-two species in addition to one variety of each ofA. nidulans andA. flavus which belong to eighteen genera were recovered.Aspergillus, Chrysosporium, Penicillium, Microsporum andFusarium were the most frequent genera developed from baited soils.     

A new method of salt pan formation in intertidal marshes

Summary

Records of fungi occurring in the Hebrides are extended, particularly for Jura and Islay where, respectively, 40 and 47 taxa are recorded for the first time. Twenty taxa are added to the list for Rhum and 89 to that for Colonsay. Additional fungi are also reported for Hirta (St. Kilda) , Bernary, Mingulay, Barra and South Uist in the Outer Hebrides, and Eigg and Canna in the Inner Hebrides.     

Arbuscular mycorrhizal colonization of halophytes in Central European salt marshes

 Halophytes from both coastal and inland Central European salt marshes were examined for colonization by arbuscular mycorrhizal (AM) fungi. Plants from different families were strongly colonized but the degree of colonization varied with the individual plant and apparently during the vegetation period, too. Members of the typical non-mycorrhizal families like Armeria maritima of the Plumbaginaceae and Salicornia europaea of the Chenopodiaceae were found to be colonized, particularly in the drier salt marshes. High numbers of Glomus spores were found in the saline soils, especially those of the inland locations examined. Approximately 80% of these spores were from Glomus geosporum as shown by a typical restriction fragment length polymorphism (RFLP) pattern of the amplified internal transcribed spacer regions. The present study demonstrates that RFLP analysis is useful when screening habitats for the occurrence of mycorrhizal fungi which can be identified only with difficulty by morphological criteria. Accepted: 25 August 2000     

The coastal salt marshes of California and Baja California

A comparative study of the North American salt marshes between Magdalena Plain (Baja California, 24° N)_and the north of San Francisco (California 38° N) is made in order to establish relationships between floristic and zonal gradients. The sigmatistic-phytosociological method along with Average Linkage Clustering are used to describe the zonation of these salt marshes and to define the optimum zone of several halophilous plants and communities.Abbreviations (As) Arthrocnemum subterminalis - (Ds) Distichlis spicata - (Fg) Frankenia salina - (Jc) Jaumea carnosa - (MI) Monanthochloe littoralis - (S1) Sarcocornia pacifica, prostrate biotype - (S2) Sarcocornia pacifica, erect biotype - (Sp) Spartina foliosa     

Spatially heterogeneous refugia and predation risk in intertidal salt marshes

The effect of habitat structure on interactions between predators and prey may vary spatially. In estuarine salt marshes, heterogeneity in refuge quality derives from spatial variation in vegetation structure and in tidal inundation. We investigated whether predation by blue crabs on periwinkle snails was influenced by distance from the seaward edge of the salt marsh and by characteristics of the primary habitat structure, smooth cordgrass ( Spartina alterniflora ). Spartina may provide refuge for snails and interfere with foraging by crabs. Furthermore, predation risk should decline with distance from the seaward edge because landward regions require more travel time for crabs during tidal inundation. We investigated these processes using a comparative survey of snails and habitat traits, an experiment that assessed the crab population and measured predation risk, and a size-structured model that estimated encounter rates. Taken together, these approaches indicated that predation risk for snails was lower where Spartina was present and was lower in a landward direction. Furthermore, Spartina architecture and distance from the seaward edge interacted. The strength of the predation gradient between seaward and landward regions of the marsh was greater where Spartina was tall or dense. These predation gradients emerge because vegetation and distance inland decrease encounter rates between crabs and snails. This study suggests that habitat modification, a process not uncommon in salt marshes, may have consequences for interactions among intertidal fauna.     

Trematodes associated with mangrove habitat in Puerto Rican salt marshes

Batillaria minima is a common snail in the coastal estuaries of Puerto Rico. This snail is host to a variety of trematodes, the most common being Cercaria caribbea XXXI, a microphallid species that uses crabs as second intermediate hosts. The prevalence of infection was higher (7.1%) near mangroves than on mudflats away from mangroves (1.4%). Similarly, there was a significant positive association between the proportion of a site covered with mangroves and the prevalence of the microphallid. The association between mangroves and higher trematode prevalence is most likely because birds use mangroves as perch sites and this results in local transmission to snails.