Possible method of aluminium speciation in forest soils

Labile Al forms and species can be a threat in acid soils due to their potential toxicity to plants. However, there is no universally accepted extraction method. Several extraction reagents for Al release from soil have been tested. KCl (0.5 or 1 M) is recommended for extraction of exchangeable Al, while 0.5 or 0.3 M CuCl(2) is suggested for extraction of 'weakly organically bound Al'. Both 0.1 and 0.05 M Na(4)P(2)O(7) are shown to be suitable for the extraction of 'total organically bound Al'. These extractions are relatively simple, robust, and applicable to different soils and soil horizons. In the second part of the paper, detailed speciation of exchangeable soil Al by means of an HPLC instrument equipped with an ion column (IC) is presented. An experimental set-up is described and tested on a set of samples. Interpretation of the speciation results is proposed, based on the separation of Al ions and Al complexes according to their charge. Speciation is shown to be dependent mainly on soil pH and organic matter quality. A general scheme of Al fractionation and speciation in soil is proposed.     

Assessment of soil aluminium pools along three mountainous elevation gradients

Anthropogenic soil acidification in mountain forests and consequent Al release still present a significant problem in many regions. The effect of deposition may differ according to stand conditions, including altitude. This contribution is focused on three elevation transects, two in the Jizera Mountains strongly influenced by acid deposition, one in the less affected Novohradske Mountains. Quantification of pools of different Al forms and related soil characteristics (organic carbon, exchangeable hydrogen cations, sorption characteristics, etc.) is evaluated. In the Novohradske Mountains, the pool of both organically bound and water-soluble Al increases with increasing altitudes. In the Jizera Mountains, the distribution is more complicated; it is strongly affected by different forest type (beech vs. spruce), deforestation, and other local differences. Higher amounts of Al are bound in the mineral horizons compared to the surface organic horizons, even in the case of organically bound Al pools. Further differences between different altitudes and between soil horizons in Al distribution were revealed by detailed Al speciation using HPLC/IC method.     

Carbon isotopic fractionation in subtropical brazilian grassland soils. Comparison with tropical forest soils

The natural relationship¹³C/¹²C determined in three soil profiles under grass vegetation indicated a depletion in organic¹³C at depth: theδ ¹³C was between −18‰ and −15‰ in the A horizons and ranged from −18 to −22‰ at depth. Previous work showed that in forest soils, whereδ ¹³C was near −28‰ in the upper horizon, there was, on the contrary, a relative enrichment of the lower strata. This meant thatδ ¹³C, initially different in the various topsoils, became more equal at depth. Comparison between dark, deep horizons (sombric horizons), which are certainly of illuvial origine, would confirm this:δ ¹³C of grassland and a forest sombric horizon were almost equal at around −22‰. These results might mean that, in natural ecosystems, the isotopic carbon composition of the soil underlying humus would be independent of the vegetation type. This would have practical implications for the use of¹³C as a tracer for soil organic matter studies.     

Methane consumption in two temperate forest soils

Forest soils are thought to be an important sink for atmospheric methane. To evaluate methane consumption,¹⁴C-labeled methane was added to the headspace of intact soil cores collected from a mixed mesophytic forest and from a red spruce forest located in the central Appalachian Mountains. Both soils consumed the added methane at initially high rates that decreased as the methane mixing ratio of the air decreased. The mixed mesophytic forest soil consumed an average of 2 mg CH₄ m^–2 d^–1 versus 1 mg CH, m^–2 d^–1 for the spruce forest soil. The addition of acetylene to the headspace completely suppressed methane consumption by the soils, suggesting that an aerobic methane-consuming microorganism mediated the process. At both forest sites, methane mixing ratios in soil air spaces were greater than that in the air overlying the soil surface, indicating that these soils had the ability to produce methane. Models of methane emission from forest soils to the atmosphere must represent methane flux as the balance between production and consumption of methane, which are controlled by very different factors     

Activity profiling of ectomycorrhiza communities in two forest soils using multiple enzymatic tests

Data on the diversity and distribution of enzyme activities in native ectomycorrhizal (ECM) communities are inadequate. A microplate multiple enzymatic test was developed which makes it possible to measure eight enzyme activities on 14 individual, excised ECM root tips. Hydrolytic and oxidative enzymes are involved in the decomposition of lignocellulose, chitin and phosphorus-containing organic compounds. This test system was used to describe the functional diversity of ECM communities in two forest sites. This set of tests proved to be accurate and sensitive enough to reveal a high diversity of activity profiles, depending on the fungal symbiont and the soil horizon. Ectomycorrhizas can be classified into specialists and generalists, and appear to complement each other in the same horizon to collectively perform all eight activities studied. By including a higher number of different assays for more detailed analyses, ECM activity profiling will provide a valuable tool for studying the functional diversity of ECM communities.     

A comparison of fractionation methods for forms of phosphorus in soils

We used l6 soils to compare the Hedley method for soil phosphorus fractionation to an alternative method recently developed by Ruttenberg to differentiate among P fractions in marine sediments. For forms of labile and Fe-bound P in soils, these methods were poorly correlated, with the Hedley fractionation showing a greater ability to discriminate among variations in plant-available P. For Ca-bound P, total organic P, and total P, the methods were well correlated (r² = 0.93, 0.48, 0.74, respectively), although the sum of P measured in the Ruttenberg extractions is only 45% of the total P recovered by the Hedley fractionation. The Hedley fractionation seems superior when an index of plant-available phosphorus and a separation of organic and inorganic forms is needed, whereas the Ruttenberg method allows a separation of CaCO₃-bound P from apatite-P, which is potentially useful in calcareous soils.     

Quantification of dead ectomycorrhizae from forest soils using computerized image analysis

A first-generation regression model is presented, describing a linear relationship between dead ectomycorrhizal biomass (mg dry weight) and mycorrhizal area in the xy-plane (mm²) (r²=0.996). This model enables reliable estimates of dead ectomycorrhizal biomass in soils through area measurements of mycorrhizae using computerized image analysis.     

Large contribution of arbuscular mycorrhizal fungi to soil carbon pools in tropical forest soils

The origins and composition of soil organic matter (SOM) are still largely uncertain. Arbuscular mycorrhizal fungi (AMF) are recognized as indirect contributors through their influence on soil aggregation, plant physiology, and plant community composition. Here we present evidence that AMF can also make large, direct contributions to SOM. Glomalin, a recently discovered glycoprotein produced by AMF hyphae, was detected in tropical soils in concentrations of over 60 mg cm^–3. Along a chronosequence of soils spanning ages from 300 to 4.1 Mio years, a pattern of glomalin concentrations is consistent with the hypothesis that this protein accumulates in soil. Carbon dating of glomalin indicated turnover at time scales of several years to decades, much longer than the turnover of AMF hyphae (which is assumed to be on the order of days to weeks). This suggests that contributions of mycorrhizae to soil carbon storage based on hyphal biomass in soil and roots may be an underestimate. The amount of C and N in glomalin represented a sizeable amount (ca. 4–5%) of total soil C and N in the oldest soils. Our results thus indicate that microbial (fungal) carbon that is not derived from above- or below-ground litter can make a significant contribution to soil carbon and nitrogen pools and can far exceed the contributions of soil microbial biomass (ranging from 0.08 to 0.2% of total C for the oldest soils).     

亚热带两种森林土壤担子菌漆酶基因多样性比较

漆酶是降解森林凋落物中木质素的关键酶之一,直接影响着森林生态系统碳循环过程.运用TA克隆、测序技术,研究了两种亚热带森林(原生常绿落叶阔叶混交林和人工马尾松林)凋落物层(O层)和土壤表层(A层,0～20 cm)降解木质素的担子菌漆酶基因多样性.结果表明:同一土壤层位,原生林土壤中担子菌漆酶基因多样性和种群丰富度高于马尾松林;同一森林生态系统,原生林土壤O层中担子菌漆酶基因多样性和种群丰富度略高于土壤A层,而马尾松林则O层明显低于A层;两森林土壤具有相同含漆酶基因的担子菌优势种群,且大部分优势种群与伞菌目小菇属或侧耳属有较高的氨基酸相似性;与原生林土壤A层和马尾松林土壤O层相比,原生林土壤O层和马尾松林土壤A层中含漆酶基因的担子菌种群分布相对均匀;马尾松林O层与A层之间漆酶基因核苷酸序列的相似性较原生林土壤O层与A层之间的高.表明植被和土壤层位显著影响漆酶基因多样性和群落结构,而植被和土壤层位引起的担子菌可利用底物和土壤pH值的差异可能直接驱动这种影响.     

Biogeochemical implications of labile phosphorus in forest soils determined by the Hedley fractionation procedure

Forest ecologists and biogeochemists have used a variety of extraction techniques to assess labile vs. non-labile soil P pools in chronosequences, the balance between biological vs. geochemical control of P transformations across a wide range of soil orders, the role of plants with either N-fixing or mycorrhizal symbionts in controlling soil P fractions, and to make inferences about plant-available P. Currently, variants of the sequential extraction procedure developed by M. J. Hedley and co-workers afford the greatest discrimination among labile and non-labile organic and inorganic P pools. Results of recent studies that used this technique to evaluate P fractions in forest soils indicate the following: (1) in intact, highly weathered forest soils of the humid tropics, Hedley-labile P values are several times larger than extractable P values resulting from mildly acidic extracting solutions which were commonly used in the past 2 decades; (2) pools of Hedley-labile P are several times larger than the annual forest P requirement and P required from the soil annually in both temperate and tropical forests; (3) long-term trends in non-labile P pools during pedogenesis are adequately represented by the Walker and Syers' model of changes in P fractionation during soil development. However, to better represent trends in pools that can supply plant-available P across forest soils of different age and weathering status, the paradigm should be modified; and (4) across a wide range of tropical and temperate forest soils, organic matter content is an important determinant of Hedley-labile P.     

The effects of disturbance on forest butterflies using two methods of sampling in Trinidad

The butterfly assemblages of pairs of forest habitats, differing in disturbance level, within the Victoria Mayaro reserve of South-East Trinidad, are described using walk-and-count transects and canopy and understorey fruit traps. The concurrent use of these two butterfly censusing techniques, revealed major but conflicting differences in species accumulation rates under different disturbance conditions. The disturbed evergreen habitat had the significantly highest accumulation rate from walk-and-count data but the significantly lowest from fruit trap data. This reflects the specificity of much of the fruit-feeding guild for closed canopy forest. Disturbed habitats were found to lack a distinct canopy fauna. These results are discussed in light of the intermediate disturbance hypothesis. Within a region of forest, butterflies were found to be more characteristic of a disturbance level than of a particular forest type, lending weight to the belief that butterfly faunas can be used as bioindicators of forest disturbance. Several restricted geographic range species were not adversely affected by forest disturbance, at these levels of disturbance. The butterfly censuses in this study suggest that the optimal strategy for safeguarding butterfly species richness under natural forest management regimes would be to maintain a mosaic of habitats that included areas of undisturbed primary forest and a network of other forest patches, that varied in management regime and level of disturbance.     

Seasonal rate of nitrate reduction in two temperate forest soils

Rainfall and throughfall chemistry beneath Sitka spruce of four ages were determined for a one year period. Throughfall beneath the older stands was consistently much more acid than rainfall. The H-ion flux was more than twice that in rainfall. Throughfall beneath the younger stands was only slightly more acid than rainfall, but the throughfall H-ion flux was considerbly less than in rainfall because the canopy intercepted a large proportion of rainfall. Concentrations and fluxes of other major cations and anions were greater in throughfall than precipitation for all crop ages.     

Vertical distribution and pools of microbial residues in tropical forest soils formed from distinct parent materials

The contribution of soil microbial residues to stable carbon pools may be of particular importance in the tropics where carbon residence times are short and any available carbon is rapidly utilized. In this study we investigated the vertical distribution of microbially-derived amino sugars in two tropical forests on contrasting meta-sedimentary and serpentinite parent materials in the lowlands of Mt. Kinabalu, Borneo. Despite their similar climate, vegetative cover, and general microbial community structure, the two soils were chemically and physically distinct. We found that both parent material and depth significantly influenced the pool sizes of microbial residues in the two soils. In particular, the soil derived from sedimentary parent material had greater amino sugar contents, glucosamine to galactosamine ratios, and percentage of total soil carbon that is amino sugar derived, than the soil derived from serpentinite substrate. We speculate that residue stabilization was linked to soil iron oxide content, with significant difference in amino sugars contribution to total soil carbon at depth in the serpentinite-derived soil versus that derived from sedimentary parent material. Based on observed patterns of amino sugar content and relative abundance we suggest that near the surface of both soils vegetation and litter input determines the composition and quantity of microbial residues. With increasing depth the influence of vegetation declines and production and stabilization of microbial amino sugars becomes driven by soil matrix characteristics. These differences in stabilization mechanism and carbon dynamics with depth may be particularly critical in deep weathered tropical soils.     

Comparison of fractionation of groundnut proteins by two different methods

The salt-soluble proteins of groundnut meal were fractionated by precipitation with (NH₄)₂SO₄ by increasing the (NH₄)₂SO₄ saturation in steps of 10%. The sharp separation into arachin and conarachin claimed by earlier workers was not achieved, as protein was precipitated at each stage from 20 to 100% saturation with (NH₄)₂SO₄. The fractions so obtained were examined by disc electrophoresis on polyacrylamide gel and the amino acid compositions were determined by ion-exchange chromatography. Differences in both electrophoretic pattern and amino acid composition were found. The protein precipitated by CaCl₂ solution was similar in yield, nitrogen content, electrophoretic pattern, and amino acid composition to the fraction precipitating at 10–20% (NH₄)₂SO₄ saturation. The main differences in amino acid composition of the various fractions precipitated by (NH₄)₂SO₄ were found in the amino acids cystine, methionine, and lysine, which increased with increase in (NH₄)₂SO₄ saturation. The electrophoretic pattern and amino acid composition of “conarachin” varied according to the method of preparation.     

Identification of two genes potentially associated in iron-heme homeostasis in human carotid plaque using microarray analysis

Classic characteristics are poor predictors of the risk of thromboembolism. Thus, better markers for the carotid atheroma plaque formation and symptom causing are needed. Our objective was to study by microarray analysis gene expression of genes involved in homeostasis of iron and heme in carotid atheroma plaque from the same patient. mRNA gene expression was measured by an Affymetrix GeneChip Human Gene 1.0 ST arrays (Affymetrix, Santa Clara, CA, USA) using RNA prepared from 68 specimens of endarteriectomy from 34 patients. Two genes involved in iron-heme homeostasis, CD163 and heme oxygenase (HO-1), were analysed in 34 plaques. CD163 (2.18, p?=?1.45E?08) and HO-1 (fold-change 2.67, p?=?2.07E?09) mRNAs were induced. We suggest that atheroma plaques show a more pronounced induction of CD163 and HO-1. Although further evidence is needed, our results support previous data. To our knowledge, this is the first report comparing gene expression between intact arterial tissue and carotid plaque using microarray analysis.     

Geochemical aspects of aluminium in forest soils in Galicia (N.W. Spain)

The aqueous speciation of Al was studied in acid forest soils in N.W. Spain. Aluminum concentrations were 10–70 mol L^–1, with variable proportions oflabile, nonlabile, andacid-soluble Al. Almost all thelabile Al was found complexed with F^–, Al³⁺ concentrations being low. The importance of organic matter was seen in the formation of Al-organic complexes in the solid soil fraction and the presence of aqueous alumino-organic complexes in superficial horizons (umbric epipedons) rich in organic matter.     

Nitrogen cycling in two riparian forest soils under different geomorphic conditions

At the floodplain scale, spatial pattern and successional development of riparian vegetation are under the control of geomorphic processes. The geomorphic and hydraulic characteristics of stream channels affect the sorting of organic material and inorganic sediment through erosion/sedimentation during floods. In turn, the proportion of fine sediments fractions differs by location within a given community of riparian forest succession. In this paper we tested the effect of geomorphic features of floodplains, through soil grain size sorting, on the nitrogen cycling in riparian forest soils. Two typical riparian forests formed by vertical accretion deposits from repeated addition of sediments from overbank flow have been chosen along the River Garonne, southwest France. These riparian forests had equivalent vegetation, flood frequency and duration, differing only in soil grain size composition: one riparian forest had sandy soils and the other had loamy soils. The evolution of the main soil physical and chemical parameters as well as denitrification (DNT), N uptake (N _U ) and mineralization (N _M ) rates were measured monthly over a period of 13 months in the two study sites. The loamy riparian forest presented a better physical retention of suspended matter during floods. Moreover,in situ denitrification rates (DNT) and N uptake by plants (N _U ) measured in the loamy riparian forest soils were significantly greater than in the sandy soils. Although DNT and N _U could be in competition for available nitrogen, the peak rates of these two processes did not occur at the same period of the year, N _U being more important during the dry season when DNT was minimum, while DNT rates were maximum following the spring floods. N retention by uptake (N _U ) and loss by DNT represented together the equivalent of 32% of total organic nitrogen deposited during floods on the sandy riparian forest soils and 70% on the loamy ones. These significant differences between the two sites show that, at the landscape level, one should not estimate the rates of N _U and DNT, in riparian forests soils only on the basis of vegetation, but should take also into account the geomorphic features of the floodplain.     

Seasonal variation of water extractable aluminium forms in acidified forest organic soils under different vegetation cover

The Jizera Mountains area is affected by natural and anthropogenic acidification processes. The effect of acidification is reflected by presence of elevated amount of different Al forms in soil horizons. Changes of water extractable forms of Al (total $ {\text{Al}}_{{{\text{H}}_{2} {\text{O}}}} $ , species: Al(X)¹⁺, Al(Y)²⁺ and Al³⁺) and other soil characteristics (e.g. DOC, pH) were investigated in forest soils from April to October 2008. Seasonal changes of Al forms were identified in organic F and H soil horizons. No significant effect of the soil type on Al forms was documented. Nevertheless, influence of vegetation cover (beech and spruce forest, clear-cut area) on Al(X)¹⁺, Al(Y)²⁺ forms was proved. The results show that binding and mobility of Al forms are controlled mostly by pH and dissolved organic carbon (DOC).     

Changes in water content of two agricultural soils does not alter labile P and C pools

Aims

An incubation study was conducted to investigate how changes in soil water content affect labile phosphorus and carbon pools, mineralisation patterns and microbial community composition.

Methods

Two soils from different climatic histories were subjected to four long-term (15 weeks) soil water regimes (constant field capacity (m); 3 dry-rewet (DRW) cycles evenly spaced (intermittent, int); 3 DRW cycles with a shorter interval after a long dry period (false break, fb); constantly air-dry (d)) (incubation period 1). In the subsequent incubation period 2, a set of cores from each treatment were subjected to one DRW cycle (air-dry for 7 day; field capacity for 14 day) or maintained at field capacity.

Results

Long-term soil water regime altered soil respiration with the largest CO₂ pulse occurring in soil with the longest dry period. However, changing the distribution of the 3 DRW events within incubation period 1 (int/fb) did not alter cumulative CO₂. In addition, DRW during incubation period 2 did not affect cumulative CO₂ in either treatment (m, int, fb, d) (except for Hamilton int). Our results show that carbon and phosphorus availability and the size and community composition of the microbial biomass were largely unaffected by fluctuating soil water content.

Conclusions

Changes in soil water content altered respiration, phosphatase activity and microbial C:P ratio and indicate physiological and/or functional changes in the microbial community. However, it appeared that these would have little impact on plant P availability.     

Changes in organic phosphorus composition in boreal forest humus soils: the role of iron and aluminium

Organic phosphorus (P) is an important component of boreal forest humus soils, and its concentration has been found to be closely related to the concentration of iron (Fe) and aluminium (Al). We used solution and solid state ³¹P NMR spectroscopy on humus soils to characterize organic P along two groundwater recharge and discharge gradients in Fennoscandian boreal forest, which are also P sorption gradients due to differences in aluminium (Al) and iron (Fe) concentration in the humus. The composition of organic P changed sharply along the gradients. Phosphate diesters and their degradation products, as well as polyphosphates, were proportionally more abundant in low Al and Fe sites, whereas phosphate monoesters such as myo-, scyllo- and unknown inositol phosphates dominated in high Al and Fe soils. The concentration of inositol phosphates, but not that of diesters, was positively related to Al and Fe concentration in the humus soil. Overall, in high Al and Fe sites the composition of organic P seemed to be closely associated with stabilization processes, whereas in low Al and Fe sites it more closely reflected inputs of organic P, given the dominance of diesters which are generally assumed to constitute the bulk of organic P inputs to the soil. These gradients encompass the broad variation in soil properties detected in the wider Fennoscandian boreal forest landscape, as such our findings provide insight into the factors controlling P biogeochemistry in the region but should be of relevance to boreal forests elsewhere.