Evaluation of apple replant problems based on different soil disinfection treatments—links to soil microbial community structure?

Background and aims

Replant problems or soil sickness are known phenomena but still unsolved. The aims of this study were (i) to set up a test system for detecting replant problems using in vitro propagated apple rootstocks (M26) based on different soil disinfection treatments and (ii) to explore the treatment effects on root morphology and soil microbial community structure.

Methods

The bio-test involved soil with apple replant problems (apple sick) and healthy soil from an adjacent plot, both either untreated, or submitted to treatments of 50 and 100 °C, or the chemical soil disinfectant Basamid. Histological analyses of roots and denaturing gradient gel electrophoresis (DGGE) fingerprints in rhizosphere soil collected at the final evaluation were performed.

Results

After 10 weeks, shoot dry mass on apple sick soil was 79, 108 and 124 % higher for soil treated at 50 °C, 100 °C and with Basamid, respectively, compared to the untreated soil. Roots in untreated apple sick soil showed destroyed epidermal and cortical layers. DGGE fingerprints revealed treatment dependent differences in community composition and relative abundance of total bacteria, Bacillus, Pseudomonas and total fungi.

Conclusions

The clear differences detected in soil microbial communities are the first steps towards a better understanding of the causes for apple replant problems.     

Influence of serpentine abundance on the vertical distribution of available elements in soils

Background and Aim

Biotic and abiotic factors contribute in shaping the distribution through the soil profile of elements released by mineral weathering; among them, leaching and biocycling dominate in temperate environments. We evaluated if the intensity of leaching and biocycling of nutrients can be modulated by element deficiencies linked to the abundance of serpentine in the soil parent material, i.e. if the most deficient elements are more efficiently retained.

Methods

We selected twelve poorly developed soils from Northern Italian beech stands, with variable amounts of serpentinites in the parent material, and determined total and exchangeable Ca, Mg and K, as well as an index of abundance of serpentine minerals.

Results

The total element content depended on the abundance of serpentines, while only exchangeable Mg was related to the parent material. The vertical trend of Ca and K indicated the role of biocycling in all soils, but the relative availability of Ca (ratio between exchangeable and total content) was much higher in the top horizons of serpentine-rich soils.

Conclusions

The different element availability among soils suggested that the vertical distribution of available elements was linked to the parent material and that losses were limited in serpentine-rich soils, probably because plants take up the deficient elements as soon as they are released from litter and thus limit their leaching in deeper soil horizons.     

The influence of alkaline and non-alkaline parent material on Norway spruce tree chemical composition and growth rate

Background and aims

This study investigated the influence of contrasting parent materials on tree chemical composition and growth rate under field conditions. On the island of Alnö, Sweden, alkaline intrusions are interspersed into non-alkaline gneiss bedrock, which provides a unique opportunity to conduct this study with a minimum of confounding effects.

Methods

Three plots with alkaline and three plots with non-alkaline parent material were established in a homogenous Norway spruce stand. The chemical composition of soil and soil solution was determined throughout the soil profiles. The chemical composition of bark, wood and needles was determined for each plot, and the latest 5 year basal area growth increment calculated.

Results

Concentrations of Ca in needles were correlated with the soil exchangeable Ca levels. Tree growth rate was significantly higher on the alkaline plots and positively correlated with soil concentrations of Ca, Mg, P, and Zn. The tree growth rate also tended to correlate with soil N concentrations, but levelled out for the highest soil N concentrations.

Conclusions

Tree growth was enhanced on the alkaline plots and was correlated with several elements. However, none of these elements could be confirmed as the limiting one for tree growth at the current site.     

Disparity in 90Sr and 137Cs uptake in Alpine plants: phylogenetic effect and Ca and K availability

Background and aims

Uptake of ⁹⁰Sr and ¹³⁷Cs in plants varies widely between soil types and between plant species. It is now recognized that the radionuclide uptake in plants is more influenced by site-specific and plant-specific parameters rather than the bulk radionuclide concentration in soil. We hypothesized that the stress which Alpine plants experience because of the short growing season may enhance the phylogenetic effect on the ¹³⁷Cs and ⁹⁰Sr transfer factors as well as the dependency of the uptake by plant to the concentrations of exchangeable Ca and K of soils.

Methods

We carried out a field study on the ⁹⁰Sr and ¹³⁷Cs uptake by 11 species of Alpine plants growing on 6 undisturbed and geochemically different soils in the Alpine valley of Piora, Switzerland.

Results

Results show that a strong correlation exists between the log TF and the log of exchangeable Ca or K of the soils.

Conclusions

Cs uptake by Phleum rhaeticum (Poales) and Alchemilla xanthochlora (Rosales) is more sensitive to the amount of exchangeable K in the soil than the corresponding uptake by other orders. Moreover, the ⁹⁰Sr results indicate a phylogenetic effect between Non-Eudicot and Eudicots: the order Poales (Phleum rhaeticum) concentrating much less ⁹⁰Sr than Eudicots do.     

Overexpression of a novel salt stress-induced glycine-rich protein gene from alfalfa causes salt and ABA sensitivity in Arabidopsis

Key message

We cloned a novel salt stress-induced glycine-rich protein gene ( MsGRP ) from alfalfa. Its overexpression retards seed germination and seedling growth of transgenic Arabidopsis after salt and ABA treatments.

Abstract

Since soil salinity is one of the most significant abiotic stresses, salt tolerance is required to overcome salinity-induced reductions in crop productivity. Many glycine-rich proteins (GRPs) have been implicated in plant responses to environmental stresses, but the function and importance of some GRPs in stress responses remain largely unknown. Here, we report on a novel salt stress-induced GRP gene (MsGRP) that we isolated from alfalfa. Compared with some glycine-rich RNA-binding proteins, MsGRP contains no RNA recognition motifs and localizes in the cell membrane or cell wall according to the subcellular localization result. MsGRP mRNA is induced by salt, abscisic acid (ABA), and drought stresses in alfalfa seedlings, and its overexpression driven by a constitutive cauliflower mosaic virus-35S promoter in Arabidopsis plants confers salinity and ABA sensitivity compared with WT plants. MsGRP retards seed germination and seedling growth of transgenic Arabidopsis plants after salt and ABA treatments, which implies that MsGRP may affect germination and growth through an ABA-dependent regulation pathway. These results provide indirect evidence that MsGRP plays important roles in seed germination and seedling growth of alfalfa under some abiotic stress conditions.     

Amending soils of different texture with six compost types: impact on soil nutrient availability, plant growth and nutrient uptake

Background

Composts with different feedstocks may have differential effects on soil properties and plant growth which, may be further modulated by soil texture.

Materials and methods

In a 77-day pot experiment in the glasshouse, we investigated the effect of a single application as mulch of six types of composts derived from different starting feedstocks in two soils (13% and 46% clay, referred to as S13 and S46) on soil physical, chemical and biological properties, plant growth and nutrient uptake. Composts were placed as 2.5?cm thick mulch layer on the soil surface and wheat plants were grown and harvested at 42?days and at 77?days (grain filling).

Results

Composts differed in total and available N and P and particle size with C1, C3, C4 and C5 being fine-textured, whereas C2 and C6 were coarse-textured. Compost addition as mulch increased soil total organic C and EC, but had no effect on pH. In all treatments, cumulative soil respiration was higher in S13 than in S46 and was increased by compost addition with the greatest increase with C2 and C6. Compared to the unamended soil, most compost mulches (except C2) increased macroaggregate stability. Compost mulches significantly increased available P and N in both soils, except for C2. Compost mulches increased available N up to 6-fold in both soils with the strongest increase by C5. Most composts also increased wheat growth and shoot P and N concentrations with the greatest effect on plant N concentration by C5 and on plant P concentration by C4. However, C2 decreased shoot N and P concentrations compared to the unamended soil. Most compost mulches (except C2) increased mycorrhizal colonization by up to 50% compared to the unamended soil.

Conclusions

Fine-textured compost mulches generally had a greater effect on soil properties and plant growth than coarse-textured composts. Despite distinct differences between the soils with respect to clay content, TOC and available P, the effect of the compost mulches on soil and plant properties was quite similar.     

Using wavelet analysis to examine bark microrelief

Key Message

An improved quantification of variations in bark microrelief is presented that uses wavelets on a circular domain from data acquired using the LaserBark? automated tree measurement system.

Abstract

An important metric of canopy structure, bark microrelief affects both the hydrology and biogeochemistry of forests. Increased bark microrelief leads to reduced stemflow volumes and higher concentrations of stemflow leachates and nutrient-ions. Consequently, an improved representation of bark microrelief would be useful to describe the influence of various tree species on water and solute contributions to the forest floor. Most existing methods to quantify bark microrelief are ‘global’ measures; that is, they provide a single number that represents the overall bark microrelief of the entire perimeter of the tree. To remedy this, wavelet analysis of LaserBark? automated tree measurement system data is proposed and described to quantify variations in bark microrelief around the perimeter of the tree. This measure describes the spatial differences in bark microrelief and allows representation of trees that exhibit directional variability in bark microrelief due to natural or anthropogenic effects. The results show that wavelet analysis is effective in quantifying both bark microrelief and large-scale tree asymmetry. The radial component highlights changes in the depth of bark microrelief while the tangential component relates to the distance between bark furrows in the bark cross section. Thus, wavelet analysis may be a useful tool for comparing bark structure that varies, for example, within- and between-tree species, at different stages of tree growth, and among trees grown under different environmental conditions.     

Ninety-year-, but not single, application of phosphorus fertilizer has a major impact on arbuscular mycorrhizal fungal communities

Background and aims

Arbuscular mycorrhizal (AM) fungi play a significant role in P nutrition of crops in agriculture, but P accumulation in the soil, e.g., application of P-fertilizer, generally reduces AM fungal colonization. The impact of long-term application of chemical fertilizer on AM fungal communities was investigated with respect to the time scale.

Methods

Soils were collected from four plots with different fertilizer management in the long-term experimental field established in 1914. Lotus japonicus was grown in the soils in a greenhouse, while Glycine max was grown in the plots in the field. DNA was extracted from their roots, and the diversity and community compositions were analyzed based on occurrence of the AM fungal phylotypes defined by sequence similarity in the LSU rDNA.

Results

The 90-year-application of N and K in the absence of P increased AM fungal diversity and resulted in formation of a distinctive fungal community compared with those in the other treatments. This effect was not cancelled by single application of P. Whereas the impact of balanced application of N, P, and K was ambiguous.

Conclusion

These observations suggest that the presence/absence of P-fertilizer has a major impact on AM fungal communities, but the action may appear only on a long time scale.     

Changes in microbial activities and biomasses over a forest floor gradient in C-to-N ratio

Background and aims

Under chronically elevated N deposition, N retention mainly occur at high soil C-to-N ratio. This may be mediated through soil microbes, such as ectomycorrhizal (EM) fungi, saprotrophic fungi and bacteria, and the aim of this study was to evaluate the relationship between soil microbes and forest floor C-to-N ratios.

Methods

Soil samples from 33 Norway spruce (Picea abies (L.) H. Karst) forests in Denmark and southern Sweden in a forest floor C-to-N ratio gradient (ranging from 14 to 35) were analysed regarding the content of phospholipid fatty acids (PLFAs) to estimate their soil microbial community composition and the relative biomasses of different microbial groups. The relation of EM biomass to total fungal biomass was estimated as the loss of the fungal PLFA 18:2ω6,9 during incubation of soils and the production of EM mycelia was estimated using fungal in-growth mesh bags. The soil microbial variables were correlated to forest floor C-to-N ratio, NO ₃ ^- leaching, soil pH and stand age.

Results

Fungal proportions of microbial biomass, EM to total fungi and EM mycelial production were all positively related to C-to-N ratio, while NO ₃ ^- leaching was negatively related to C-to-N ratio.

Conclusions

Both EM and saprotrophic fungi change with forest floor C-to-N ratios and appear to play a central role in N retention in forest soil. A better understanding of the mechanisms behind this process may be revealed if the role of recalcitrant fungal metabolites for N retention (and soil C sequestration) can be identified. Research along this line deserves further studies.     

Predicting forest site productivity in temperate lowland from forest floor, soil and litterfall characteristics using boosted regression trees

Aims

The aim of this study is on the one hand to identify the most determining variables predicting the site productivity of pedunculate oak, common beech and Scots pine in temperate lowland forests of Flanders; and on the other hand to test whether the accuracy of site productivity models based exclusively on soil or forest floor predictor variables is similar to the accuracy achieved by full ecosystem models, combining all soil, vegetation, humus and litterfall composition related variables.

Methods

Boosted Regression Trees (BRT) were used to model in a climatically homogeneous region the relationship between environmental variables and site productivity. A distinction was made between soil (soil physical and chemical), forest floor (vegetation and humus) and ecosystem (soil, forest floor and litterfall composition jointly) predictors.

Results

Our results have illustrated the strength of BRT to model the non-linear behaviour of ecological processes. The ecosystem models, based on all collected variables, explained most of the variability and were more accurate than those limited to either soil or forest floor variables. Nevertheless, both the soil and forest floor models can serve as good predictive models for many forest management practices.

Conclusions

Soil granulometric fractions and litterfall nitrogen concentrations were the most effective predictors of forest site productivity in Flanders. Although many studies revealed a fertilising effect of increased nitrogen deposition, nitrogen saturation seemed to reduce species’ productivity in this region.     

Effects of beech (Fagus sylvatica), ash (Fraxinus excelsior) and lime (Tilia spec.) on soil chemical properties in a mixed deciduous forest

Background and aims

We investigated the genetic diversity of arbuscular mycorrhizal fungi (AMF) in soils and the roots of Phalaris aquatica L., Trifolium subterraneum L., and Hordeum leporinum Link growing in limed and unlimed soil, the influence of lime application on AMF colonization and the relationship between AMF diversity and soil chemical properties.

Methods

The sampling was conducted on a long-term liming experimental site, established in 1992, in which lime was applied every 6 years to maintain soil pH (in CaCl₂) at 5.5 in the 0–10 cm soil depth. Polymerase chain reaction, cloning and sequencing techniques were used to investigate the diversity of AMF.

Results

Altogether, 438 AMF sequences from a total of 480 clones were obtained. Sequences of phylotypes Aca/Scu were detected exclusively in soil, while Glomus sp. (GlGr Ab) and an uncultured Glomus (UnGlGr A) were detected only in plant roots. Glomus mosseae (GlGr Aa) was the dominant AMF in the pastures examined; however, the proportion of G. mosseae was negatively correlated with soil pH, exchangeable Ca and available P. Generally, diversity of the AMF phylotypes was greater in the bulk unlimed soil and plants from this treatment when compared to the limed treatments.

Conclusions

Long-term lime application changed soil nutrient availability and increased AMF colonization, but decreased AMF phylotype diversity, implying that soil chemistry may determine the distribution of AMF in acid soils. Future studies are required to explore the functions of these AMF groups and select the most efficient AMF for sustainable farming in acid soils.     

Changes induced by the roots of Erica arborea L. to create a suitable environment in a soil developed from alkaline and fine-textured marine sediments

Background and aims

We report on the modifications induced by the roots of Erica arborea L. on a soil derived from alkaline and fine-textured marine sediments.

Methods

Physical, chemical, mineralogical and biochemical properties of bulk soil and of the rhizosphere of Erica were characterised to evaluate its role on soil development.

Results

Once the upper horizons had been decarbonated because of geomorphic and pedogenic processes, Erica colonised the soil and progressively modified it through the activity of roots. In the upper horizons, there was no difference between rhizosphere and bulk soil for pH, organic C and exchangeable Al and H. At depth, pH, organic C and exchangeable Al and H differed between rhizosphere and bulk soil. The weathering reactions induced by the Erica roots caused a relative quartz enrichment in the rhizosphere compared with the bulk soil. In the E, EB and Bw horizons, the microbial community of the rhizosphere appeared better adapted than in the underlying 2Bw horizons, where the rhizospheric microorganisms were poorly adapted as these horizons represented the boundary between acid and sub-alkaline soil environments.

Conclusions

The activity of Erica roots modified soil properties so to produce more favourable conditions for itself and the rhizosphere microflora.     

Potassium release characteristics, potassium balance, and fingermillet (Eleusine coracana G.) yield sustainability in a 27- year long experiment on an Alfisol in the semi-arid tropical India

Aims

In Alfisols, potassium (K) deficiency limits productivity, as these soils are poor in K-bearing minerals such as mica. As nutrient management practices greatly influence K nutrition of crops especially in the longer term, we evaluated the effects of 27 (1978–2004) years of cropping fingermillet (Eleusine coracana G.) under different manure and mineral fertilizer treatments on K release, balance and yield sustainability on K deficient Alfisols in the semi-arid tropical region of southern India.

Methods

Fingermillet (variety: PR-202) was grown each year under rainfed conditions with 5 different nutrient management treatments: control (no amendment), 10 Mg ha^?1 farm yard manure (FYM), 10 Mg ha^?1 FYM +50 % NPK, 10 Mg ha^?1 FYM +100 % NPK and 100 % NPK. Potassium release characteristics in the soil profile were determined using 1 N boiling HNO₃ (strong extracting solution), 0.01 M HCl (medium extracting solution) and 0.01 M CaCl₂ (mild extracting solution).

Results

Continuous cropping of Alfisols for 27 years resulted in a decrease in K supplying capacity due to soil K depletion through crop K uptake. In soils without K addition, inherent soil supply could not meet the K requirement of fingermillet; thus, a negative K balance following 27 years of cropping affected K nutrition of the crop in all the treatments. As a result, the highest sustainable yield index (SYI) was observed using an integrated nutrient supply (combined application of nutrients from organic and inorganic sources), and the lowest index was obtained without K additions.

Conclusion

For balanced nutrient management in cereal production systems, K nutrition needs urgent attention in the K deficient Alfisol region of southern India. Addition of any amount of organic manures available at field level offers an alternative strategy for maintaining soil K fertility to improve and sustain crop productivity.     

Impact of two root systems, earthworms and mycorrhizae on the physical properties of an unstable silt loam Luvisol and plant production

Aims

The aim of this study was to compare the residual effects in soil and the influence on a flax crop (Linum usitatissimum L.) of applying Zn from different commercial synthetic chelates. The chelates used were: Zn-EDDHSA (Zn-ethylenediamine-N,N'-bis(2-hydroxyphenylacetate), Zn-EDTA (Zn-ethylenediaminetetraacetate), Zn-HEDTA (Zn-N-2-hydroxyethyl-ethylenediaminetriacetate), Zn-EDTA-HEDTA and Zn-DTPA-HEDTA-EDTA (Zn-DTPA, Zn-diethylenetriaminepentaacetate).

Methods

The experiment was conducted in a greenhouse using two different soils (Soil_acid: a weakly acidic soil and Soil_calc: a calcareous soil). Each treatment was administered, in a single application, to a previous flax crop at different Zn application rates. The yield and some of the flax crop quality parameters were determined in the present flax crop. Soil Zn behavior was then evaluated by single and sequential extraction.

Results

In Soil_acid, the Zn-HEDTA and Zn-EDDHSA fertilizers produced the highest plant parameters values (total Zn concentration, total uptake Zn), percentages of Zn utilization and values of the transfer factor, TF. In contrast, in Soil_calc these fertilizers produced the lowest in-plant values, with this soil producing the highest yield, quality, percentage of utilization and TF associated with the application of Zn-DTPA-HEDTA-EDTA and Zn-EDTA fertilizers. However, the Zn-EDTA in Soil_acid and Zn-DTPA-HEDTA-EDTA in Soil_calc, were associated with the greatest amounts of bioavailable Zn in soil and also with the highest Zn concentrations associated with the sum of the most labile fractions (water soluble plus exchangeable fractions).

Conclusions

The residual Zn produced by the different fertilizer treatments estimated using the DTPA, Mehlich-3- and LMWOAs methods- was available in sufficient quantities that it not be necessary to add any further Zn (which could have resulted in over-fertilization) for the subsequent crop to either of the soils.     

Influence of potassium and sodium nutrition on leaf area components in Eucalyptus grandis trees

Background and Aims

Recent studies showed a positive tree response to Na addition in K-depleted tropical soils. Our study aimed to gain insight into the effects of K and Na fertilizations on leaf area components for a widely planted tree species.

Methods

Leaf expansion rates, as well as nutrient, polyol and soluble sugar concentrations, were measured from emergence to abscission of tagged leaves in 1-year-old Eucalyptus grandis plantations. Leaf cell size and water status parameters were compared 1 and 2 months after leaf emergence in plots with KCl application (+K), NaCl application (+Na) and control plots (C).

Results

K and Na applications enhanced tree leaf area by increasing both leaf longevity and the mean area of individual leaves. Higher cell turgor in treatments +K and +Na than in the C treatment resulting from higher concentrations of osmotica contributed to increasing both palisade cell diameters and the size of fully expanded leaves.

Conclusions

Intermediate total tree leaf area in treatment +Na compared to treatments C and +K might result from the capacity of Na to substitute K in osmoregulatory functions, whereas it seemed unable to accomplish other important K functions that contribute to delaying leaf senescence.     

Long-term effects of organic amendments on the recovery of plant and soil microbial communities following disturbance in the Canadian boreal forest

Background and Aims

Ecosystem recovery following disturbance requires the reestablishment of key soil biogeochemical processes. This long-term 7 year study describes effects of organic material, moisture, and vegetation on soil microbial community development in the Athabasca Oil Sands Region of Western Canada.

Methods

Phospholipid fatty acid analysis was used to characterize and compare soil microbial community composition and development on reclaimed and natural forest sites. Additionally, we conducted a laboratory moisture manipulation experiment.

Results

The use of forest floor material as an organic amendment resulted in a greater percent cover of upland vegetation and placed the soil microbial community on a faster trajectory towards ecosystem recovery than did the use of a peat amendment. The soil microbial composition within the reclaimed sites exhibited a greater response to changes in moisture than did the soil microbial communities from natural sites.

Conclusion

Our research shows that the use of native organic amendment (forest floor) on reclaimed sites, and the associated establishment of native vegetation promote the development of soil microbial communities more similar to those found on natural forest sites. Additionally, soil microbial communities from natural sites may be more resistant to changes in soil moisture than those found on reclaimed sites.     

Interacting effects of wildfire severity and liming on nutrient cycling in a southern Appalachian wilderness area

Aims

Wilderness and other natural areas are threatened by large-scale disturbances (e.g., wildfire), air pollution, climate change, exotic diseases or pests, and a combination of these stress factors (i.e., stress complexes). Linville Gorge Wilderness (LGW) is one example of a high elevation wilderness in the southern Appalachian region that has been subject to stress complexes including chronic acidic deposition and several wildfires, varying in intensity and extent. Soils in LGW are inherently acidic with low base cation concentrations and decades of acidic deposition have contributed to low pH, based saturation, and Ca:Al ratio. We hypothesized that wildfires that occurred in LGW followed by liming burned areas would accelerate the restoration of acidic, nutrient depleted soils. Because soils at LGW had extremely low concentrations of exchangeable Ca²⁺ and Mg²⁺ dolomitic lime was applied to further boost these cations. We evaluated the effectiveness of dolomitic lime application in restoring exchangeable Ca²⁺ and Mg²⁺ and subsequently increasing pH and Ca:Al ratio of soils and making Ca and Mg available to recovering vegetation.

Methods

Five treatment areas were established: severely burned twice (2000 & 2007) with dolomitic lime application (2xSBL); moderately burned twice with lime application (2xMBL); severely burned twice, unlimed (2xSB); moderately burned once (2000), unlimed (1xMB); and a reference area (REF; unburned, unlimed). In 2008 and 2009, we measured overstory, understory, and ground-layer vegetation; forest floor mass and nutrients; and soil and soil solution chemistry within each treatment area.

Results

All wildfire burned sites experienced substantial overstory mortality. However, understory biomass doubled between sample years on the most recently burned sites due to the rapid regrowth of ericaceous shrubs and prolific sprouting of deciduous trees. Burning followed by lime application (2xSBL and 2xMBL) significantly increased shallow soil solution NO₃-N, but we found no soil solution NO₃-N response to burning alone (2xSB and 1xMB). Surface soil base saturation and exchangeable Ca²⁺ were significantly affected by liming; Ca²⁺ concentrations were greater on 2xMBL and 2xSBL than 2xSB, 1xMB and REF. There was a smaller difference due to moderate burning along with greater soil Ca²⁺ on 1xMB compared to REF, but no difference between 2xSB and REF. Surface and subsurface soil exchangeable Al³⁺ were lower on 2xSBL than 2xSB, 2xMBL, 1xMB, and REF. Liming decreased soil acidity somewhat as surface soil pH was higher on the two burned sites with lime (pH?=?3.8) compared to 2xSB without lime (pH?=?3.6).

Conclusions

Liming resulted in decreased soil Al³⁺ on 2xSBL coupled with increased soil Ca²⁺ on both 2xSBL and 2xMBL, which improved soil Ca/Al ratios. However, the soil Ca/Al ratio response was transitory, as exchangeable Al³⁺ increased and Ca/Al ratio decreased over time. Higher lime application rates may be necessary to obtain a substantial and longer-term improvement of cation-depleted soils at LGW.     

Aluminum tolerance of wheat does not induce changes in dominant bacterial community composition or abundance in an acidic soil

Aims

Aluminum-tolerant wheat plants often produce more root exudates such as malate and phosphate than aluminum-sensitive ones under aluminum (Al) stress, which provides environmental differences for microorganism growth in their rhizosphere soils. This study investigated whether soil bacterial community composition and abundance can be affected by wheat plants with different Al tolerance.

Methods

Two wheat varieties, Atlas 66 (Al-tolerant) and Scout 66 (Al-sensitive), were grown for 60 days in acidic soils amended with or without CaCO₃. Plant growth, soil pH, exchangeable Al content, bacterial community composition and abundance were investigated.

Results

Atlas 66 showed better growth and lower rhizosphere soil pH than Scout 66 irrespective of CaCO₃ amendment or not, while there was no significant difference in the exchangeable Al content of rhizosphere soil between the two wheat lines. The dominant bacterial community composition and abundance in rhizosphere soils did not differ between Atlas 66 and Scout 66, although the bacterial abundance in rhizosphere soil of both wheat lines was significantly higher than that in bulk soil. Sphingobacteriales, Clostridiales, Burkholderiales and Acidobacteriales were the dominant bacteria phylotypes.

Conclusions

The difference in wheat Al tolerance does not induce the changes in the dominant bacterial community composition or abundance in the rhizosphere soils.     

Growth rate of fine root systems influences rootstock tolerance to replant disease

Aims

Plant tolerance to herbivory has often been linked to plant growth rate, with faster growing plants that present high tissue turnover rates expected to be more tolerant than slower-growing plants. We tested whether this relationship also holds for rootstock growth rate and tolerance to apple replant disease (ARD).

Methods

An ARD susceptible rootstock, M.26 and ARD tolerant rootstock, CG.6210 were grown in soil from an apple replant site (FS) and in pasteurized soil (PS) from the same site. Total below ground biomass production was determined by harvesting a subset of plants per soil treatment and rootstock at 11, 17, and 23 weeks after planting. Root samples were collected prior to each harvesting date to determine root respiration and total carbon (C) and nitrogen (N) content. Root dynamics were tracked during the growing season by digitally photographing root observation windows.

Results

Total root biomass, first and second order roots, and second-to-first order root ratio were higher in CG.6210 than in M.26 in both soil treatments. Roots of CG.6210 were thinner and had lower N concentration than those of M.26. Roots of M.26 had longer lifespans than those of CG.6210, and the mortality risk of M.26 roots was 56 % that of CG.6210 roots.

Conclusion

Our study indicates that rootstocks with faster growing root systems can tolerate ARD infection by investing fewer resources in individual root construction that can be shed more readily.     

Exploring warm-season cover crops as carbon sources for anaerobic soil disinfestation (ASD)

Background and aims

Anaerobic soil disinfestation (ASD) has been shown to be an effective strategy for controlling soilborne plant pathogens and plant-parasitic nematodes in vegetable and other specialty crop production systems. Anaerobic soil disinfestation is based upon supplying labile carbon (C) to stimulate microbially-driven anaerobic soil conditions in moist soils covered with polyethylene mulch. To test the effectiveness of warm-season cover crops as C sources for ASD, a greenhouse study was conducted using a sandy field soil in which several warm-season legumes and grasses were grown and incorporated and compared to molasses-amended and no C source controls.

Methods

Greenhouse pots were irrigated to fill soil porosity and covered with a transparent polyethylene mulch to initiate a 3-week ASD treatment prior to planting tomatoes. Soilborne plant pathogen inoculum packets, yellow nutsedge (Cyperus esculentus L.) tubers, and Southern root-knot nematode (Meloidogyne incognita (Kofoid & White) Chitwood; M.i.) eggs and juveniles were introduced at cover crop incorporation.

Results

In nearly all cases, ASD treatment utilizing cover crops as a C source resulted in soil anaerobicity values that were equal to the molasses-amended fallow control and greater than the no C source fallow control. In trial 1, Fusarium oxysporum Schlechtend.:Fr. (F.o.) survival was reduced by more than 97% in all C source treatments compared to the no C source control but there was no effect of C source in Trial 2. Carbon source treatments were inconsistent in their effects on survival of Sclerotium rolfsii Sacc. (S.r). In general, the number of M.i. extracted from tomato root tissue and root gall ratings were low in all treatments with cover crop C source, molasses C source, or composted poultry litter. Germination of yellow nutsedge tubers was highest in the no C source control (76%), lowest in the molasses control (31%), and intermediate from cover crop treatments (49% to 61%).

Conclusions

Warm-season cover crops have potential to serve as a C source for ASD in vegetable and other crop production systems, but more work is needed to improve consistency and further elucidate mechanisms of control of soilborne plant pathogens and weeds during ASD treatment utilizing cover crops.