Governance factors in the identification of global conservation priorities for mammals

Global conservation priorities have often been identified based on the combination of species richness and threat information. With the development of the field of systematic conservation planning, more attention has been given to conservation costs. This leads to prioritizing developing countries, where costs are generally low and biodiversity is high. But many of these countries have poor governance, which may result in ineffective conservation or in larger costs than initially expected. We explore how the consideration of governance affects the selection of global conservation priorities for the world's mammals in a complementarity-based conservation prioritization. We use data on Control of Corruption (Worldwide Governance Indicators project) as an indicator of governance effectiveness, and gross domestic product per capita as an indicator of cost. We show that, while core areas with high levels of endemism are always selected as important regardless of governance and cost values, there are clear regional differences in selected sites when biodiversity, cost or governance are taken into account separately. Overall, the analysis supports the concentration of conservation efforts in most of the regions generally considered of high priority, but stresses the need for different conservation approaches in different continents owing to spatial patterns of governance and economic development.     

Incorporating evolutionary history into conservation planning in biodiversity hotspots

There is increased evidence that incorporating evolutionary history directly in conservation actions is beneficial, particularly given the likelihood that extinction is not random and that phylogenetic diversity (PD) is lost at higher rates than species diversity. This evidence is even more compelling in biodiversity hotspots, such as Madagascar, where less than 10% of the original vegetation remains. Here, we use the Leguminosae, an ecologically and economically important plant family, and a combination of phylogenetics and species distribution modelling, to assess biodiversity patterns and identify regions, coevolutionary processes and ecological factors that are important in shaping this diversity, especially during the Quaternary. We show evidence that species distribution and community PD are predicted by watershed boundaries, which enable the identification of a network of refugia and dispersal corridors that were perhaps important for maintaining community integrity during past climate change. Phylogenetically clustered communities are found in the southwest of the island at low elevation and share a suite of morphological characters (especially fruit morphology) indicative of coevolution with their main dispersers, the extinct and extant lemurs. Phylogenetically over-dispersed communities are found along the eastern coast at sea level and may have resulted from many independent dispersal events from the drier and more seasonal regions of Madagascar.     

How global extinctions impact regional biodiversity in mammals

Phylogenetic diversity (PD) represents the evolutionary history of a species assemblage and is a valuable measure of biodiversity because it captures not only species richness but potentially also genetic and functional diversity. Preserving PD could be critical for maintaining the functional integrity of the world's ecosystems, and species extinction will have a large impact on ecosystems in areas where the ecosystem cost per species extinction is high. Here, we show that impacts from global extinctions are linked to spatial location. Using a phylogeny of all mammals, we compare regional losses of PD against a model of random extinction. At regional scales, losses differ dramatically: several biodiversity hotspots in southern Asia and Amazonia will lose an unexpectedly large proportion of PD. Global analyses may therefore underestimate the impacts of extinction on ecosystem processes and function because they occur at finer spatial scales within the context of natural biogeography.     

Traits,trees and taxa: global dimensions of biodiversity in mammals

Measures of biodiversity encompass variation along several dimensions such as species richness (SR), phylogenetic diversity (PD) and functional/trait diversity (TD). At the global scale, it is widely recognized that SR and PD are strongly correlated, but the extent to which either tends to capture variation in TD is unclear. Here, we assess relationships among PD, SR and TD for a number of traits both across clades and regional assemblages of mammals. We also contrast results using two different measures of TD, trait variance and a new measure we refer to as trait bin filling (the number of orders of magnitude of variation that contain at least one species). When TD is defined as trait variance, PD is a much stronger correlate of TD than SR across clades, consistent with hypotheses about the conservation value of PD. However, when TD is defined as bin filling, PD and SR show similar correlations with TD across clades and space. We also investigate potential losses of SR, PD and TD if species that are currently threatened were to go extinct, and find that threatened PD is often a similar predictor of threatened TD as SR.     

Multifaceted biodiversity modelling at macroecological scales using Gaussian processes

Aim

Modelling the response of β‐diversity (i.e., the turnover in species composition among sites) to environmental variation has wide‐ranging applications, including informing conservation planning, understanding community assembly and forecasting the impacts of climate change. However, modelling β‐diversity is challenging, especially for multiple diversity facets (i.e., taxonomic, functional and phylogenetic diversity), and current methods have important limitations. Here, we present a new approach for predicting the response of multifaceted β‐diversity to the environment, called Multifaceted Biodiversity Modelling (MBM). We illustrate the approach using both a plant diversity dataset from the French Alps and a set of simulated data. We also provide an implementation via an R package.

Location

French Alps.

Methods

For both the French Alps and the simulated communities, we compute β‐diversity indices (e.g., Sørensen dissimilarity, mean functional/phylogenetic pairwise distance) among site pairs. We then apply Gaussian process regression, a flexible nonlinear modelling technique, to predict β‐diversity in response to environmental distance among site pairs. For comparison, we also perform similar analyses using Generalized Dissimilarity Modelling (GDM), a well‐established method for modelling β‐diversity in response to environmental distance.

Results

In the Alps, we observed a general increase in taxonomic (TD) and functional (FD) β‐diversity (i.e., site pairs were more different from each other) as the climatic distance between site pairs increased. GDM performed better for TD and FD when fitting to calibration data, whereas MBM performed better for both when predicting to a validation dataset. For phylogenetic β‐diversity, MBM outperformed GDM in predicting the observed decrease in phylogenetic β‐diversity with increasing climatic distance.

Main conclusions

Multifaceted Biodiversity Modelling provides a flexible new approach that expands our capacity to model multiple facets of β‐diversity. Advantages of MBM over existing methods include simpler assumptions, more flexible modelling, potential to consider multiple facets of diversity across a range of diversity indices, and robust uncertainty estimation.

     

Bird conservation and biodiversity research in Mexico: status and priorities

Mexico has a megadiverse avifauna that includes many endemic elements, as well as rich sets of species ranging farther north or farther south in the Americas. This avifauna, nonetheless, has suffered considerable losses as a consequence of long‐term, intensive human activity across the landscape. We review what is known about the Mexican avifauna, specifically its diversity and endemism, and how that knowledge has and has not turned into effective conservation measures to assure the long‐term integrity of the avifauna.     

Phylogenetic diversity does not capture body size variation at risk in the world's mammals

Mammals contribute to important ecosystem processes and services, but many mammalian species are threatened with extinction. We compare how global patterns in three measures of mammalian diversity—species richness, phylogenetic diversity (PD) and body mass variance (BMV)—would change if all currently threatened species were lost. Given that many facets of species'' ecology and life history scale predictably with body mass, the BMV in a region roughly reflects the diversity of species'' roles within ecosystems and so is a simple proxy for functional diversity (FD). PD is also often considered to be a proxy for FD, but our results suggest that BMV losses within ecoregions would be much more severe than losses of PD or species richness, and that its congruence with the latter two measures is low. Because of the disproportionate loss of large mammals, 65 per cent of ecoregions would lose significantly more BMV than under random extinction, while only 11 per cent would lose significantly more PD. Ecosystem consequences of these selective losses may be profound, especially throughout the tropics, but are not captured by PD. This low surrogacy stresses a need for conservation prioritization based on threatened trait diversity, and for conservation efforts to take an ecosystem perspective.     

Mollusc diversity patterns in Central European fens: hotspots and conservation priorities

Aim To assess mollusc species composition and diversity patterns of treeless fen sites and to find simple environmental parameters that characterize diversity hotspots and priority sites for conservation. Location Western Carpathian Mountains, Europe. Methods Mollusc communities were sampled quantitatively from a homogeneous area of 16 m² in the central part of each of 145 treeless fen sites. Water conductivity and pH, geographical coordinates, altitude and habitat size of the sites studied, mean annual rainfall, mean annual temperature and mean January temperature were compiled for each plot. Nestedness in species composition was tested using the binmatnest program to confirm the ‘nested habitat‐quality hypothesis’. Patterns in species diversity were analysed using the regression trees method to isolate the main predictors of species diversity. Results Nested subset patterns of species composition were found along the gradient of mineral richness. Species distribution was highly nested (T_obs = 11.21, P << 0.001) in mineral‐poor sites (with water conductivity < 300 μS cm^?1, n = 42) and was highly correlated with the site’s mineral richness (r_s = 0.76, P << 0.001). By contrast, species distribution and richness of mineral‐rich sites (c.≥ 300 μS cm^?1, n = 103) were not controlled by mineral richness. Variation in species richness was further explained by January temperature, landscape geomorphology, and total habitat area. The southern mineral‐rich low altitude fens were the most species rich, especially those of larger total area (23 species on average). These 24 sites (17% of all sites) harboured 90% of all recorded species, including all highly endangered ones. Mineral‐rich fens in montane valleys were the second most important group because they hosted the majority of populations of two rare glacial relict species (Vertigo geyeri and Pupilla alpicola). Main conclusions The significant nestedness raises the possibility of conserving the whole fen‐mollusc species pool within the most species‐rich sites. Thus, to select the conservation priority sites, easily available site characteristics for the prediction of species richness are needed. This knowledge can help us maintain fen biodiversity, which has become closely dependent on conservation management practices after the cessation of traditional mowing of fens for haymaking.     

The Mediterranean monk seal Monachus monachus: status,biology, threats,and conservation priorities

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Geographical gradients in the biodiversity of Chinese freshwater molluscs: Implications for conservation

Aim

Large ‐ scale diversity patterns are generated by different but not mutually exclusive mechanisms. However, understanding of multiple facets of diversity and their determinants in the freshwater realm remains limited. Here, we characterized the geographical gradients, hotspots and spatial congruence of three facets of freshwater molluscan diversity and evaluated the relative importance of three different underlying mechanisms related to the energy, area/environmental heterogeneity and dispersal/historical hypotheses.

Location

China.

Methods

Species richness (SR), functional richness (FR) and taxonomic distinctness (TD, a proxy of phylogenetic diversity) were calculated for 212 drainage basins with a total of 313 molluscan species. Spatial congruence between the diversity facets was evaluated with Pearson correlation coefficient and overlap among hotspots. Multiple linear regression models and variation partitioning were used to assess the relative importance of different mechanisms.

Results

Hotspots of SR and FR were mainly concentrated in the Yangtze River and Huai River basins, while high TD values were patchily distributed across China. We found extremely low spatial congruence between TD and both SR and FR, while there was relatively high concordance between SR and FR. All diversity facets were best explained by the dispersal/historical hypothesis with strong unique effects, followed by the factors related to the energy hypothesis. The area/ environmental heterogeneity hypothesis was only weakly supported.

Main conclusions

We found a potentially strong influence of dispersal limitation and evolutionary history on the geographical diversity gradients of Chinese molluscs. This finding contrasts with the general finding that energy‐related factors are the strongest correlates of diversity patterns at large spatial scales. Moreover, our results do not support the idea that using any one diversity component as a surrogate of the others in developing conservation strategies. Instead, an integrative approach embracing multiple facets of diversity should be adopted in the conservation of freshwater biodiversity.

     

Towards biodiversity hotspots effective for conserving mammals with small geographic ranges

The main goal of using global biodiversity hotspots for conservation purposes is to protect taxa with small geographic ranges because these are highly vulnerable to extinction. However, the extent to what different hotspots types are effective for meeting this goal remains controversial because hotspots have been previously defined as either the richest or most threatened and richest sites in terms of total, endemic or threatened species. In this regard, the use of species richness to set conservation priorities is widely discussed because strategies focused on this diversity measure tend to miss many of the taxa with small geographic ranges. Here we use data on global terrestrial mammal distributions to show that, hotspots of total species, endemism and threat defined in terms of species richness are effective in including 27%, 29% and 11% respectively, of the taxa with small geographic ranges. Whilst, the same hotspot types defined in terms of a simple diversity index, which is a function of species richness and range-size rarity, include 68%, 44% and 90% respectively, of these taxa. In addition, we demonstrate that index hotspot types are highly efficient because they conserve 79% of mammal species (21% more species than richness hotspot types), with 59% of species shared by three hotspot types (31% more than richness hotspot types). These results suggest that selection of different diversity measures to define hotspots may strongly affect the achievement of conservation goals.     

Setting priorities for the conservation of terrestrial vertebrates in Hungary

The first step towards the preservation of endangered species is to establish an appropriate ranking system, which assigns different nature conservation priority scores to different taxa. The system developed by Millsap et al. (Wildlife Monograph 1990, 111: 1–57) has been modified and applied to the mammal, bird, reptile, and amphibian species of Hungary. Three variable groups have been compiled, including eight (measuring biological characteristics), three (features of the Hungarian population) and five (evaluation of research and conservation actions) variables, respectively. In cooperation with several experts, we gave scores to all 379 taxa considered. The most endangered taxon proved to be the Hungarian Meadow Viper (Vipera ursinii rakosiensis), which occurs only in Hungary with just a few hundred individuals. The species rank depends on the availability and quality of data, so it is urgent to devote more effort to survey and monitoring projects. We present a possible application of the species list, where the taxa are grouped according to their legal status in Hungary (strictly protected, protected, partly protected and not protected), and the validity of this categorisation was tested by applying multivariate discriminant analysis. Only 58.36% of the species were correctly classified. The reasons for stronger than expected protection include popularity, attractiveness, and local rarity, while reasons for lower protection include preference for hunting and control of predators and pests.     

Bioindicators of edge effects within Atlantic Forest remnants: Conservation implications in a threatened biodiversity hotspot

Aim

Deforestation of the Atlantic Forest of eastern Paraguay has been recent but extensive, resulting in a fragmented landscape highly influenced by forest edges. We examined edge effects on multiple dimensions of small mammalian diversity.

Location

Forest fragments of eastern Paraguayan Atlantic Forest.

Methods

We trapped small mammal species at different distances from the forest edge (DTE) in reserves and estimated multiple dimensions of diversity per site. Similarity analysis identified species clusters that best described the patterns of diversity across reserves. Multivariate ordination and linear mixed models were used to determine the influence of DTE on various dimensions of small mammal diversity.

Results

There was an increase in richness and abundance along a DTE gradient, and remnants with higher edge:area ratios showed higher richness and abundance, independent of remnant size. Species at edges were generalists, open-habitat species or exotic species (spillover effect). We found higher phylogenetic diversity and functional richness and divergence towards forest edges. Spillover of non-forest and invasive species best explained richness, generalist forest species best explained total abundance, abundance of Hylaeamys megacephalus best explained diversity and evenness metrics and the presence of Marmosa paraguayana best explained various phylogenetic diversity models. None of the models that included megafauna or social factors were shown to be important in explaining patterns as a function of DTE.

Main Conclusions

We found strong support for a spillover effect and mixed support for complementary resource use and enhanced habitat resources associated with ecotones. Generalists characterized edge assemblages but not all generalists were equivalent. Edges showed more phylogenetically and functionally distinct assemblages than the interior of remnants. There was a conservation of functional diversity; however, open-habitat species, habitat generalists and exotic species boosted diversity near forest edges. Mechanisms governing diversity along forest edges are complex; disentangling those mechanisms necessitates the use of multiple dimensions of diversity.     

Endemic birds of the Atlantic Forest: traits,conservation status,and patterns of biodiversity

The bird fauna of the Brazilian Atlantic Forest is exceptionally diverse and threatened, with high levels of endemism. Available lists of the endemic birds of the Atlantic Forest were generated before recent taxonomic revisions lumped or split species and before the recent increase in species occurrence records. Our objective, therefore, was to compile a new list of the endemic birds of the Atlantic Forest, characterize these species in terms of conservation status and natural history traits, and map remaining vegetation and protected areas. We combined GIS analysis with a literature search to compile a list of endemic species and, based on the phylogeny and distribution of these species, characterized areas in terms of species richness, phylogenetic diversity, and endemism. We identified 223 species of birds endemic to the Atlantic Forest, including 12 species not included in previous lists. In addition, 14 species included in previous lists were not considered endemic, either because they occur outside the Atlantic Forest biome or because they are not considered valid species. The typical Atlantic Forest endemic bird is a small forest‐dependent invertivore. Of the species on our list, 31% are considered threatened or extinct. Only ~ 34% of the spatial analysis units had > 10% forest cover, and protected area coverage was consistently low (< 1%). In addition, we found spatial incongruity among the different measures of biodiversity (species richness, relative phylogenetic diversity, restricted‐range species, and irreplaceability). Each of these measures provides information concerning different aspects of biological diversity. However, regardless of which aspect(s) of biodiversity might be considered most important, preservation of the remaining areas of remnant vegetation and further expansion of protected areas are essential if we are to conserve the many endemic species of birds in the Atlantic Forest.     

Review of stress in marine mammals

There has been a growing concern over the last few decades about theeffects of environmental stress, including anthropogenic impacts, onmarine mammals. This paper provides an overview of the wide range ofanthropogenic stressors that marine mammals may encounter and the levelof understanding on their potential effects. Sources of stress andphysiological responses of the animals are explored. Many of the lifehistory traits of marine mammals (i.e., long-life spans, late maturity,relatively low reproductive potential, and feeding high in the foodchain), make them susceptible to various anthropogenic stressors. Sincemarine mammals are exposed to a diverse array of multiple stressors,this paper focuses on three case studies (acute and chronic effects fromoil spills; chronic effects from environmental contaminants, andfishery-induced stress) to emphasize potential relevant hazards and toprovide a perspective on the use of marine mammals in assessingecosystem health. Additional research to enhance our understanding ofstress on marine mammals and to provide the science needed to guidemanagement decisions is recommended.     

Marine longitudinal biodiversity: causes and conservation

The horizontal temperature zones of the earth tend to restrict the latitudinal ranges of species but allow the possibility of exceedingly broad longitudinal dispersals. In the Tropical Zone, biodiversity on the continental shelves is not homogeneous but is concentrated in two conspicuous peaks, one in the Indo‐Pacific Ocean and the other in the Atlantic. The Indo‐Pacific biodiversity peak is located within a relatively small area called the East Indies Triangle. The Atlantic peak is located in the southern Caribbean Sea. Evidence that has been accumulated over the years indicates that each area functions as a centre of origin and evolutionary radiation. What are the causes of these concentrations and their present functions? A newly published model indicates a positive relationship between environmental temperature and the rate of speciation. While this helps to explain the generally high tropical diversity, and the negative relationship between diversity and latitude, it does not provide a reason for the longitudinal concentrations. But, other new research serves to substantiate previous indications of a positive relationship between speciation rate and species diversity. The existence of this positive feedback, together with some contributory factors, provides the reason why concentrations occur. The evolutionary radiation probably begins when the build‐up of species diversity reaches a critical level. The warm‐temperate biotas are derived from the tropics. Their northern longitudinal relationships tend to be minor but, in the southern hemisphere, the West Wind Drift is an important dispersal mechanism for both warm‐temperate and cold‐temperate species. The cold‐temperate biotas peaked in two areas, the North Pacific and the Antarctic; each has developed into a centre of origin. The continuous dispersal of well‐adapted species from the centres helps peripheral communities maintain diversity.     

Coastal-marine discontinuities and synergisms: implications for biodiversity conservation

Coastal-marine biodiversity conservation must focus increasingly at the level of the land- and seascape. Five cases illustrate discontinuities and synergisms and how system changes may take place. For Caribbean coral reefs, the result of overfishing and disease has been a shrinkage in the entire system, the effects of which may cascade through the coastal seascape. For Beringia, patterns of benthic diversity are best understood in a manner that matches the multiscale, integrated dynamics of weather, ice, marine mammal feeding, and community structure. In the case of US East Coast estuaries, oyster reefs may be keystone elements, with important effects on functional diversity. Large-scale coastal systems depend upon the connectivity of fresh and marine waters in the coastal zone, having implications for the apparent stochasticity of coastal fisheries. And, for a coastal barrier-lagoon site, a state change may be described in terms of a combination of succession, the attainment of a quasi-equilibrium state, and disturbance. A profound problem for conservation is that there is very little information about the relationship between species diversity and ecological function. Coastal-marine biodiversity conservation is best addressed at the level of the land- and seascape.