COMPARISON OF GROWTH AND SINKING RATES OF NON-COCCOLITH- AND COCCOLITH-FORMING STRAINS OF EMILIANIA HUXLEYI(PRYMNESIOPHYCEAE) GROWN UNDER DIFFERENT IRRADIANCES AND NITROGEN SOURCES1

We examined the effect of the presence or absence of coccoliths on the growth and sinking rates of an oceanic isolate of the coccolithophore Emiliania huxleyi (Lohmann) Hay et Mohler isolated from the northeastern subarctic Pacific. Coccolith-forming and non-coccolith-forming (i.e. naked, nonmotile) strains were obtained from the same isolate and grown under both saturating and limiting irradiance levels with either nitrate or ammonium as the primary nitrogen source. Sinking rate, growth rate, and cell volume (excluding coccoliths) were measured for each culture. Under saturating irradiance, coccolith-forming cells grew significantly slower than naked cells, had significantly higher sinking rates, and had larger cell volumes than naked cells. Under limiting irradiance levels, growth rates of the two strains were identical, sinking rates were higher for coccolith-forming cells in stationary-phase cultures only, and cell volumes remained greater for coccolith-forming cells. The sinking rates achieved for this ubiquitous coccolithophore ranged from <0.1 to 0.5 m · d^?1. Sinking rates were not statistically different between coccolith-forming and naked strains of E. huxleyi under limiting irradiance conditions for log-phase cultures, but sinking rates were greater for coccolith-forming cells under some of the other conditions tested. However, the average sinking rate was never more than twice as great as for coccolith-forming cells, with the exception of nitrate-grown, senescent cells under limiting irradiance (3.4 times greater). Cell volumes (excluding coccoliths) were consistently ca. 1.5 times greater for coccolith-forming cells than for naked cells. Nitrogen source had an effect on growth rate and cell volume, with ammonium-grown cultures growing faster and having larger cell volumes than nitrate-grown cultures of both strains. However, despite the difference in growth rate and cell volume, nitrogen source had little if any effect on sinking rate.     

Sinking rates of heterogeneous, temperate phytoplankton populations

Throughout the summer of 1978, the sinking rates of phytoplanktonwithin the Controlled Experimental Ecosystems (CEE's) were monitoredusing a technique based upon measurement of the transit timeof radioactively (¹⁴C) labeled cells. The experimental frameworkof FOODWEB 1 offered an unprecedented opportunity to documentthe sinking rates of heterogeneous phytoplankton of diversetaxonomic composition, growing under a variety of nutrient regimes;the absence of advective exchange in the CEE's provided knowledgeof the preconditioning history of the phytoplankton sampledat any given time. Sinking rates of whole phytoplankton assemblages (not size-fractioned)ranged from 0.32 – 1.69 m·day^–1; the averagerate (± s.d.) observed was 0.64 ± 0.31 m·day^–1.The most notable deviations from the mean value occurred whenthe population size distribution and taxonomic composition shifteddue to blooms. The relationship between phytoplankton sinkingand ambient nutrient levels was studied by following the ratesof a given size fraction (8–53 µm) for ten daysfollowing nutrient enrichment of a CEE. Over this time sinkingrates ranged from 1.08– 1.53 m·day^–1; decreasedrates occurred after nutrification, yet over the course of theentire trial sinking rates were not significantly (p >0.05)correlated to the ambient levels of any single nutrient species. The sinking rate implications of spore formation were also studied,and showed that sinking rates of Chaetoceros constrictus andC. socialis spores (2.75 ± 0.61 m·day^–1)were ca 5-fold greater than rates measured when the vegetativestages of these species dominated the population, reflectingthe influence of physiological mechanisms in controlling phytoplanktonbuoyancy. An example of the potential influence of colony formation uponbuoyancy was noted in observations of C. socialis which occasionallywas found to exist in large spherical configurations made ofcoiled cell chains and having low (0.40 m·day^–1)sinking rates. A hydrodynamic rationale is presented to showhow such a colony together with enveloped water may behave asa unit particle having lower excess density, and therefore lowobserved sinking rate, despite its conspicuously large size. Overall, sinking rates were not significantly correlated withany of the measured nutrient or photic parameters. There were,however, trials and comparisons which showed evidence for: (1)higher sinking rates in populations dominated by large cells,(2) decreased sinking rates after nutrient enrichment, and (3)buoyancy response to light levels. It is suggested that correlationof sinking rates with synoptic environmental measurements atany given time is not explicit because the associations mayinvoke lag times of physiological response. The interpretationmade from these findings is that the preconditioning historyof the population, rather than the prevailing conditions atthe time of a given measurement, is most closely associatedwith population buoyancy modifications.     

Sinking of Heterosigma akashiwo results in increased toxicity of this harmful algal bloom species

Notable physiological responses such as toxicity and sinking rates of the red tide forming raphidophyte Heterosigma akashiwo are correlated with high levels of macronutrient stress. Individual cells of this species are also capable of forming benthic vegetative cysts that overwinter in marine sediment and contribute to bloom propagation in subsequent seasons. It was hypothesized that there is variability in the rates of sinking within cell cultures and that sinking cells are more toxic than the neutrally buoyant or floating cells. Using laboratory-based settling columns, various isolates of H. akashiwo were allowed to separate, and the toxicities of sinking and floating populations were analyzed. Sinking and floating rates were significantly higher during the late stationary growth phase for all isolates. For two H. akashiwo isolates, sinking populations were significantly more toxic than those that were positively buoyant. A similar trend was observed in a third strain, however the relationship was not significant. Differences in adaptive ecophysiology among the different strain likely caused the variation. It is suggested that the most toxic cells within a bloom are those found at the lower depths, potentially interacting with the benthic community or ensuring that subsequent bloom propagation contains cells with the potential for toxicity.     

Springtime coupling between ice algal and phytoplankton assemblages in southeastern Hudson Bay,Canadian Arctic

Microalgal assemblages from the bottom ice, the ice-water interface and the water column were systematically sampled from April to June 1986, in southeastern Hudson Bay (Canadian Arctic). The taxonomic similarity between samples from the three environments was assessed using a clustering procedure. There were two groups that comprised samples from both the ice-water interface and the water column, while five other groups were made of samples originating from a single environment. Taxonomic compositions of the two mixed groups suggest two types of connexion between the ice-water interface and the water column, i.e. before the phytoplankton bloom, there was seeding of the water column by ice algae and, during ice melt, interfacial algae contributed to the water column communities that were otherwise typically phytoplankton. Overall, the phytoplankton community underwent a succession from pennate to centric diatoms. Sinking rates of algae from the ice-water interface were estimated using settling columns (SETCOL). The sinking rates increased seasonally (0.4–2.7 m d^–1), which enhanced accessibility of ice-algal cells to the pelagic grazers. Ice algae contributed to water column production as they became accessible to the pelagic grazers, and also by seeding the water column before the phytoplankton bloom.Contribution to the programs of GIROQ (Groupe interuniversitaire de recherches océanographiques du Québec) and of the Maurice Lamontagne Institute (Department of Fisheries and Oceans)     

Sinking rates of planktonic diatoms in an unstratified lake: a comparison of field and laboratory observations

SUMMARY. 1. Natural population sinking rates were calculated by fitting an exponential regression to 6 years'observations on declining crops of Melosira italica subarctica O. Müll. and Stephanodiscus astraea (Ehr.) Grun.
2. Losses were described by an exponential model which yielded still water sinking rates of 0.86 md⁻¹ for M. italica and 0.45md⁻¹ for S. astraea.
3. Laboratory measurements of the sinking rate of natural populations showed that the rate increased abruptly from less than 0.2 m d⁻¹ in growing populations to 0.4 m d⁻¹ after silica depletion.
4. The measured sinking rate of S. astraea agreed well with that observed in the field. Where as populations of M. italica appeared to sink more quickly in the lake than could be accounted for by laboratory observations.     

DOES CARBOHYDRATE CONTENT AFFECT THE SINKING RATES OF MARINE DIATOMS?1

We tested the hypothesis that positive relationships between sinking rate and irradiance were due to increases in cell density caused by accumulations of carbohydrate. In semicontinuous batch cultures of Thalassiosira weissflogii (Gru.) Fryxell el Hasle and Ditylum brightwellii (t. West) Grunow in Van Huerk, carbohydrate content was varied by growing cells under diel cycles of high or low light. Sinking rate was measured at the end of the light period and the end of the dark period, on live and heat-killed cells. No positive correlations were found between sinking rate (which varied from – 0.060 to 0.13 m·d^?1) and carbohydrate content (which varied from 10 to 950 pg · cell^?1), indicating that accumulations of carbohydrate did not significantly affect sinking rate. There were no large diel variations in the sinking rate of T. weissflogii, but sinking rates of D. brightwellii grown under high light ranged from being negative (i.e. cells were floating) at the end of the light period to positive at the end of the dark period. This is the first report of positive buoyancy in vegetative D. brightwellii, a phenomenon that may only occur in D. brightwellii grown under diel cycles.     

A quantitative study of growth variability of tumour cell clones in vitro

Abstract.   Objectives : In this study, we quantify growth variability of tumour cell clones from a human leukaemia cell line. Materials and methods : We have used microplate spectrophotometry to measure growth kinetics of hundreds of individual cell clones from the Molt3 cell line. Growth rate of each clonal population has been estimated by fitting experimental data with the logistic equation. Results : Growth rates were observed to vary between different clones. Up to six clones with growth rates above or below mean growth rate of the parent population were further cloned and growth rates of their offspring were measured. Distribution of growth rates of the subclones did not significantly differ from that of the parent population, thus suggesting that growth variability has an epigenetic origin. To explain observed distributions of clonal growth rates, we have developed a probabilistic model, assuming that fluctuation in the number of mitochondria through successive cell cycles is the leading cause of growth variability. For fitting purposes, we have estimated experimentally by flow cytometry the average maximum number of mitochondria in Molt3 cells. The model fits nicely observed distributions in growth rates; however, cells in which mitochondria were rendered non-functional (ρ⁰ cells) showed only 30% reduction in clonal growth variability with respect to normal cells. Conclusions : A tumour cell population is a dynamic ensemble of clones with highly variable growth rates. At least part of this variability is due to fluctuations in the initial number of mitochondria in daughter cells.     

SURVIVAL RATES OF SEA OTTER PUPS IN ALASKA AND CALIFORNIA

Adult female sea otters ( Enhydra lutris ) were instrumented with implanted radio-transmitters in Prince William Sound (PWS), Alaska, and survival rates were estimated for their dependent pups. Overall, 94 of 141 (67%) of the pups studied survived to a minimum age of 120 d and were assumed to have successfully weaned. Survival of pups in six cohorts ranged from 53% to 88%. The mean interval between successive visual observations was 12.5 d. For these calculations, the assumption was made that pups were successfully weaned if they accompanied mothers for at least 120 d. Estimated survival rates were different when this assumption was changed to either 90 d or 150 d (73% and 52%, respectively).
Females were palpated for pregnancy when instrumented. Of 19 believed to be pregnant, 17 were subsequently seen with young pups giving a detection rate for births of 89.5%. When the above observed survival rate of pups was adjusted for undetected births, the estimated overall survival rate for the study population was 60% (120 d minimum dependency).
Survival rates of pups in PWS and a population at Kodiak Archipelago (KOD) (Monson and DeGange 1995) were compared with that of pups in the population in California (CA, four studies). These data did not support the hypothesis that survival rates were lower in California (CA: 103/160, P_surv. 0.64; PWS: 94/141, P_surv. = 0.67; KOD: 19/23, P_surv. = 0.83; pairwise comparisons, X², P > 0.05). Comparison of pup survival rates among studies was hindered by small sample sizes, methodological differences, and lack of detail about assumptions underlying estimates.     

EFFECTS OF ENVIRONMENTAL VARIATION ON SINKING RATES OF MARINE PHYTOPLANKTON1

The effects of environmental variables, particularly irradiance, on the sinking rates of phytoplankton were investigated using cultures of Chaetoceros gracilis Schütt and C. flexuosum Mangin in laboratory experiments; these data were compared with results from assemblages in the open ocean and marginal ice zone of the Greenland Sea. In culture experiments both the irradiance under which the diatom was grown and culture growth rate were positively correlated with sinking rates. Sinking rates (ψ) in the Greenland Sea were smallest when determined from chlorophyll (mean ψ_chl= 0.14 m · d^?1) and biogenic silica (ψ_si= 0.14 m · d^?1) and greatest when determined from particulate carbon (ψ_c= 0.55 m · d^?1) and nitrogen (ψ_N= 0.64 m · d^?1). Field measurements indicated that variations in sinking may be associated with changes in irradiance and nitrate concentrations. Because these factors do not directly affect water density, they must be inducing physiological changes in the cell which affect buoyancy. Although a direct response to a single environmental variable was not always evident, sinking rates were positively correlated with growth rates in the marginal ice zone, further indicating a connection to physiological processes. Estimats of carbon flux at stations with vertically mixed euphotic zones indicated that approximately 30% of the daily primary production sank from the euphotic zone in the form of small particulates. Calculated carbon flux tended to increase with primary productivity.     

Applying Pulse Amplitude Modulation (PAM) fluorometry to microalgae suspensions: stirring potentially impacts fluorescence

The use of microalgae suspensions in PAM-fluorometers such as the Water-PAM (Walz GmbH, Germany) presents the problem of maintaining a homogeneous sample. The Water-PAM is marketed with an optional accessory for stirring the sample within the cuvette while in the emitter–detector (ED) unit. This stirring device can help to prevent cells from settling out of suspension over the time-course of chlorophyll-a fluorescence measurements. The ED unit was found to provide a vertically heterogeneous light environment and, therefore, cells within a single sample can exist in different quenched states. Enhancing cell movement by stirring was found to substantially influence measured fluorescence yield while performing induction curve and rapid light curve analyses. This is likely to result from relatively unquenched cells outside the main light-path moving into a higher light region and thus emitting disproportionately more fluorescence than quenched cells. Samples containing cells with high sinking rates or motile species may encounter similar (but reduced) problems. This effect can be mitigated by: (a) reducing analysis time to minimise the distance cells can sink/swim during the measurement procedure and avoiding the necessity of stirring; (b) limiting the proportion of sample outside the light path by minimising sample volume or; (c) by activating the stirrer only for short periods between saturation pulses and allowing enough time after stirring for quenching to stabilise before activation of the saturation pulse. Alternatively, modifications to the instrument providing a vertical dimension to the LED-array could resolve the issue by providing a more homogeneous light environment for the sample.     

Heterotrophic bacterioplankton production and grazing mortality rates in an Ethiopian rift-valley lake (Awassa)

SUMMARY. 1. Heterotrophic bacterioplankton growth and production rates were estimated in a tropical lake by various methods. Mean growth rates, determined by tritiated thymidine incoporation into DNA, frequency of dividing cells and increase in cell density varied between 0.013 and 0.014 (with a range of 0.006–0.026) h⁻¹ corresponding to bacterial production of 1.16–1.22 (0.34–3.63) mg C m⁻³ h⁻¹.
2. Heterotrophic bacterial production estimated from oxygen and inorganic carbon consumption in the dark were compared with these values. The oxygen method gave similar results, while values from dark carbon uptake were as much as 2.5 times higher.
3. Although the different estimates of rates of bacterial production showed different patterns, the existence of spatial (vertical) and temporal (diel and seasonal) variation was demonstrated. Bacterial production was 13–41% of the net primary production and 10–30% of gross primary production.
4. Bacterial grazing mortality rate was estimated from size-fractionation and metablic inhibitor experiments. Average grazing rates were between 0.34 and 3.77 mg C m⁻³ h⁻¹ corresponding to 76–120% of the mean bacterial production rate. Organisms 1–12 μm in size, possibly mainly ciliates. were implicated as important bacterial grazers.     

The growth and mortality of larval herring, Clupea harengus L., in the River Blackwater Estuary, 1978–1980

Herring larvae were sampled in the Outer Thames Estuary and the River Blackwater Estuary in the springs of 1978, 1979 and 1980. Data were collected on larval stage, yolk sac and post yolk sac, larval length and total larval numbers. Newly hatched larvae were 6.8±0.5 mm long and the growth rate of yolk sac larvae was estimated at 0.18 mm d⁻¹ ( L = 6.8±0.186 t ). The growth rate of post yolk sac larvae increased to 0.43mm d⁻¹ ( L = 11±48.0±43 t ). Mortality estimates, derived from total numbers in the summed estuary segments, varied between the years and the cohorts within the year. In 1979 the mortality rates were 0.061 d⁻¹ and 0.074 d⁻¹ for the two cohorts. The mean size of the larval population was estimated at 2.48×10⁹ (1.63–3.77 × 10⁹) which agreed well with population size estimates from egg laying and from catch in numbers at age together with estimated fishing mortality rates.     

Hydrodynamic Characteristics of Daphnia middendorffiana

Sinking terminal velocities of D. middendorffiana (with and without tail spine) were measured and correlated with morphological parameters and water temperature. The main dimensions of the body showed positive growths rate correlations with the body weight. In turn, negative allometric variation was observed in the tail-spine length. The density of D. middendorffiana was age specific, and decreased as the individual grew. No differences in the sinking terminal velocities and trajectories between individuals with and without tail spine were observed. The observed hydrodynamic characteristics of D. middendorffiana were simulated by means of a model based on equivalent ellipsoids and spheres. The analysis showed that the effects of shape and the body projections are negligible on the sinking rates of D. middendorffiana.     

Phytoplankton sinking rates in the Rhine region of freshwater influence

According to Stokes’ law, colony formation in phytoplanktonwould lead to enhanced sinking rates and higher sedimentationlosses if colonies had the same densities as the phytoplanktoncells they contain. In the Dutch coastal zone of the North Sea,algae settling out of the water column are subject to zoobenthosgrazing or to physical mixing into the sediment and, therefore,the formation of colonies by common diatom species and the prymnesiophytePhaeocystis globosa seems paradoxical: it would increase theprobability that sedimentation becomes a significant loss factor.However, sinking rate measurements in the Rhine region of freshwaterinfluence (ROFI) using SetCol settling columns did not reveala straightforward relationship between phytoplankton sizes (<10to >1000 µm) and sinking rates (–0.4 to >2.2m day^-1) of 24 autotrophic phytoplankton species and groups.In fact, under nutrient-replete conditions, the sinking ratesof the diatoms Chaetoceros radicans, Rhizosolenia shrubsoleiand Rhizosolenia stolterfothii decreased with size. The sinkingrates of large colonies of the prymnesiophyte P. globosa werealso negatively correlated with their size and positive buoyancywas observed. Chlorophyll a sinking rates exceeded 1 m day^-1periodically, which is sufficient to cause significant surfacelayer loss rates over 0.2 day^-1. Under stratified conditions,both chlorophyll a concentrations and sinking rates in the bottomlayer were significantly higher (+49% and +16%, respectively)than in the surface layer. These observations are discussedin relation to Stokes’ law, together with a critical analysisof the SetCol technique. It is concluded that: (i) SetCol givesadequate results when incubations are performed at or near insitu irradiance and temperature; (ii) sinking rates are predominantlydetermined by cell or colony density rather than their size;(iii) periodic sedimentation is an important species-specificloss process for phytoplankton in the Dutch coastal zone. Itis speculated that for diatoms with low sinking rates, autolysisis an important loss factor.     

Krill diet affects faecal string settling

Summary Free-floating sediment traps used on a transect from Scotia Sea to Weddell Sea collected larger, more degraded, krill faecal strings in the deeper (150 m) than in the 50 or 75 m traps. The smallest faecal strings were only present in the shallower traps. Sinking velocity of smaller faecal strings was — as expected — much lower than for larger ones, with a total range of 50 to 800 m · day ^–1 for faecal string volumes of 0.007 to 0.53 mm³. Krill feeding largely on diatoms produced faeces with higher settling velocity than those feeding on non-diatom phytoplankton. Smaller krill faecal strings do not leave the upper mixed layer. Potential settling velocities as measured in settling tubes (without turbulence), may in this respect be misleading. Small oval faecal pellets of unknown origin showed relatively high settling velocities (80 to 250 m·day^–1 for 0.002 to 0.013 mm³) due to higher compaction and lower form resistance to sinking.Data presented here were collected during the European Polarstern Study (EPOS) sponsored by the European Science Foundation     

Phytoplankton population dynamics of a small reservoir: use of sedimentation traps to quantify the loss of diatoms and recruitment of summer bloom-forming blue-green algae

A vertical series of sedimentation traps was placed in a smallreservoir (Guelph Lake, Southern Ontario, Canada) in the springthrough summer of 1981 to intercept floating and sinking phytoplanktoncells. Information from the sedimentation traps was used todetermine the sinking loss rates of diatoms and to estimatethe relative contribution of sedimentation to the loss of thesespecies. Sinking loss rates varied with time and with depth.Sinking loss rates for Stephenodiscus astrea, Melosira granulata,and Asterionella formosa increased with the onset of thermalstratification. The abundance of Cyclotella meneghiniana declinedas the surface pH increased. The results showed good agreementbetween the proposed sedimentary fluxes of diatoms and the correspondingmaximum standing crop. Information from the trap catches wasalso used to examine the possibility of recruitment of summerblue-green species from the sediments. Specific migration ratesof floating colonies of Microcystis aeruginosa, Gompliosphaerialacustris and of Lyngbya Birgei filsments at 10 m were high(>1) for periods of time in August. For these blue-greenalgae, estimates of the population gain due to recruitment fromthe sediments ranged from 2 to 4% of the maximum standing crop.The high rates of accumulation of total phosphorus (TP) in thedownward facing trap at 10 m provided further evidence thatresuspension of material from the sediments occurred at thistime. The appearance of these blue-green algae cointided withhigh surface temperatures and the development of anoxic conditionsat 10 m. The growth or recruitment of Aphanizomenon flos-aquaewas initiated under different environmental conditions thanthose for Mierocystis, Gomphosphaeria and Lyngbya. Evidencesuggests that the Aphanizomenon filaments present at Station1 originated from the Station 3 end of the lake and were advectedtowards Station 1. ¹Present address: Zoology Department, University of Alberta,Edmonton, Alberta T6G 2E1, Canada. ²Present address: CSIRO Division of Fisheries Research, GPOBox 1538, Hobart, Tasmania, Australia 7001.     

Seasonal analysis of Daphnia pulicaria swimming behavior

Our study documents individual swimming behavior of Daphnia pulicaria over a yearly cycle in a temperate lake. We collected D. pulicaria, a common freshwater zooplankton, from Lake Mendota on 10 dates between July 1994 and June 1995 from two depths, 2 m and 10 m. The Daphnia were rushed to the laboratory and video-taped as they swam in lake water under lake-ambient temperature and light conditions. Five-second swimming tracks of individual Daphnia were filmed and digitized using a motion analysis system. We measured average turning angle, swimming speed and sinking rate for each track. D. pulicaria swimming behavior varied over the annual cycle. We found significant differences in turning angle between depths and among months. Sinking rate and swimming speed were significantly different among months but not depths. Sinking rate and swimming speed were not significantly correlated with water temperature. Our results were contrary to Stokes' Law predictions, in that D. pulicaria had the slowest sinking speed in June, not in the winter when water temperatures were lowest and viscosity was highest. Body length was significantly correlated with all three swimming variables. We also studied swimming behavior in clonal populations of D. pulicaria in different concentrations of the alga, Chlamydomonas reinhardtii. D. pulicaria did not change swimming speed, turning angle or sinking rate over a range of food concentrations. Finally, swimming behavior in a D. pulicaria clone, tested at two temperatures in the laboratory, confirmed the results from our seasonal study; Daphnia did not sink as predicted by changes in viscosity.     

一种有效的复杂疾病基因定位的检测法

连锁不平衡（LD）应用于某些复杂疾病基因的定位,近年来发展了许多LD定位方法,除TDT外,大多数LD定位方法须先假定无人群混和,人群混合可增大在疾病基因定位时犯Ⅰ类错误的机率,产生无效结果。此方法利用LD来检测标记位点和疾病敏感位点（DSL）的连锁（有连锁不平衡）相关（有连锁）。分析时采用不相关样本,已知其父母基因型和至少父母之一为杂合子,再将随机样本依基因型不同分类,然后对来自不同类的数据应用有力的统计方法进行单独和联合分析。此LD定位法不仅适用于患病和正常个体,而且有效消除据父母基因分类的样本定位时人群混合的影响,分析结果和模拟结果也表明此方法解决了在检测标记位点和疾病敏感位点之间的连锁和相关时人群混和的问题,但与TDT比,此法在检测的位点为DSL时丙能有效和充分地利用矫正数据,检测位点不是DSL时,此法和TDT法可相互补充更有效地检测连锁的DSL。     

Possibilities and limitations of sediment traps to measure sedimentation and resuspension

Settling flux of particulate matter measured by sediment traps in shallow and turbulent waters considerably exceeds settling flux calculated from mass balances. Theoretical consideration on sinking distance and particle settling leads to the conclusion that traps overtrap particles in even moderately turbulent waters. The disappearance of turbulent diffusion and bottom shear stress within the traps causes the high rates of trapping, whereas their presence in natural water bodies hampers sedimentation.The use of sediment traps may be restricted to the identification of rapidly sinking particles, measurement of sinking velocities of well defined types of particles, and estimation of resuspension.     

A Model for Bacterial Colonization of Sinking Aggregates

Sinking aggregates provide important nutrient-rich environments for marine bacteria. Quantifying the rate at which motile bacteria colonize such aggregations is important in understanding the microbial loop in the pelagic food web. In this paper, a simple analytical model is presented to predict the rate at which bacteria undergoing a random walk encounter a sinking aggregate. The model incorporates the flow field generated by the sinking aggregate, the swimming behavior of the bacteria, and the interaction of the flow with the swimming behavior. An expression for the encounter rate is computed in the limit of large Péclet number when the random walk can be approximated by a diffusion process. Comparison with an individual-based numerical simulation is also given.