微塑料对稻田土壤温室气体排放和微生物群落的影响

微塑料因在土壤环境中广泛存在及其潜在的生态风险而受到越来越多的关注。微塑料的赋存会改变土壤理化性质,并对土壤微生物群落及其驱动的生物地球化学过程产生影响,而相关研究尚处于起步阶段。可生物降解塑料作为传统塑料的替代品,越来越多地应用于农业活动,并释放到土壤中。然而,可生物降解微塑料对土壤微生物特性产生影响的研究鲜有报道。基于此,本试验以我国三江平原水稻田土壤为研究对象,选取了2种常见的微塑料为试验材料,分别为传统型微塑料聚丙烯(Polypropylene,PP)和可降解微塑料聚乳酸(Polylactic acid,PLA),进行了为期41d的微宇宙培养实验,旨在分析不同浓度与类型的微塑料对土壤可溶性有机碳(Dissolved Organic Carbon,DOC)含量及官能团特征、温室气体排放以及微生物群落结构的差异性影响。结果表明,传统型微塑料PP与可降解微塑料PLA添加均对土壤理化性质与微生物群落产生显著影响。其中,微塑料添加大体上增加了土壤DOC含量,PLA的促进作用较为明显,且增加含量与微塑料添加量呈正相关;PP和PLA均影响土壤DOC分子结构,削弱了土壤团聚化程度并促进了大分子量DOC化合物的生成;微塑料的添加促进土壤CH₄排放,而有效抑制了土壤CO₂排放;微塑料显著改变了土壤细菌和真菌群落的丰富度与多样性。相关分析结果表明,土壤CO₂累计排放量与芳香族化合物结构及疏水性等官能团特征、变形菌门(Proteobacteria)与放线菌门(Actinobacteria)均呈显著正相关关系。以上结果表明,微塑料添加改变了土壤DOC含量及官能团特征与微生物环境,进而影响土壤温室气体排放。本研究为今后微塑料对土壤地球化学和微生物特性的影响研究提供了科学的思路,同时也有助于评估微塑料对土壤生态系统的生态风险。     

我国三大水系环境微塑料污染现状及其表面微生物群落特征的研究进展

微塑料(microplastics,MPs)广泛存在于水生生态系统表层,可为水环境中微生物的富集提供独特的生态位,并对生态系统及人类健康造成潜在威胁。我国是塑料生产及使用大国,正面临着严重的塑料污染问题,我国水系的微塑料污染状况及其表面微生物群落的生态效应受到重点关注。本文总结了我国三大水系(长江、黄河、珠江)微塑料污染现状、微塑料表面微生物群落的分布特征及影响因素,最后对我国水环境中微塑料表面的微生物研究现状和未来发展提出总结与展望。     

淡水环境中微塑料对微生物耐药性的影响

微塑料和抗生素抗性基因(ARGs)作为2种主要的新兴污染物,在水生环境中共存,两者之间相互作用形成的复合污染日益引起人们的关注。微塑料可以选择性富集周围环境中的微生物和ARGs,形成生物膜,为ARGs提供潜在宿主。微塑料形成的独特“塑料圈”对于了解淡水环境中微塑料的形态和ARGs传递至关重要。本文重点综述了微塑料选择性富集水体中ARGs和微生物群落,讨论了微塑料表面抗性基因水平转移的机制,对未来淡水中微塑料及ARGs相关研究的重点方向进行了展望,以促进科学解决微塑料污染。     

城乡景观中土壤生态系统微塑料的来源、迁移特征及其风险

土壤微塑料污染的持久性、复杂性及其对土壤生态系统的影响受到越来越广泛的关注,但对其来源、迁移过程等仍有许多问题尚未理清。从复合生态系统的角度,通过对城乡景观中土壤微塑料的来源、迁移过程及其风险等相关研究进展进行了系统梳理,分析了城乡不同景观中土壤微塑料的主要来源和特点,讨论了土壤微塑料在城乡景观中的迁移特征及其驱动力,探讨了土壤微塑料在城乡景观中的生态和健康风险。今后需进一步明确城乡景观中土壤微塑料污染的物质流过程与环境归趋特征,加强微塑料对土壤生态系统的作用过程及生态系统服务影响的研究,揭示土壤微塑料对人类健康的直接或间接影响,建立城乡复合生态系统土壤微塑料污染预测模型,以维护土壤生态安全与人居环境健康。     

环境选择和扩散限制驱动温带森林土壤细菌群落的构建

环境选择和扩散限制是生态系统中生物群落构建的两个基本过程,而两者相对作用的大小因研究尺度、群落属性和类型等有所不同.目前对温带亚高山森林土壤微生物群落构建的驱动因子和机制尚缺乏了解.本文利用PCR-DGGE技术研究庞泉沟自然保护区内5种典型森林包括华北落叶松林、青杄林、白杄林、油松林以及桦树林的6个森林土壤细菌群落(Lp MC1、Lp MC2、Pw MC、Pm MC、Pt MC、BMC)的结构特征及其影响因素,分析细菌群落结构与环境因子的相关性,以及土壤因子、植被和空间因素对细菌群落结构的影响.结果表明:研究区各样地土壤细菌群落的结构和生物多样性具有显著差异,低海拔落叶松和油松土壤细菌群落多样性较高(20条带),白杄林土壤细菌群落(13条带)多样性最低,高海拔落叶松土壤细菌群落多样性最高;土壤环境因子,如pH、土壤含水量、总碳、总氮、土壤有机质、速效磷以及土壤酶活性与土壤细菌群落多样性和结构显著相关;样地土壤细菌群落的beta多样性与群落的空间距离呈显著相关,表明扩散限制对群落结构具有一定的影响;方差分解分析结果显示,6个样地细菌群落结构的驱动因素大小依次为土壤因子(0.27)、空间因素(0.19)和植被(0.15);将区域土壤微生物作为"源群落",微宇宙试验结果显示,土壤因子是细菌群落结构形成的主要驱动力(0.35),同时源群落丰富的物种多样性对微宇宙土壤细菌群落结构具有显著影响.总之,在局域尺度下,环境选择对温带森林土壤细菌群落结构动态和多样性发挥主导作用,地理距离对群落结构具有显著影响,即确定性过程和随机过程共同决定局域森林土壤细菌群落结构,前者占主导地位.对于土壤细菌群落而言,扩散群落的组成和结构受到源群落的多样性特征和环境因子的双重影响.     

土壤矿物与微生物相互作用的机理及其环境效应

土壤矿物与微生物相互作用是地球表层系统中重要的生态过程.微生物或生物分子与矿物间的吸附(粘附)是两者相互作用的基础.吸附(粘附)是一个由分子间力、静电力、疏水作用力、氢键和空间位阻效应等多种作用力或作用因素共同决定、影响的物理化学过程.因此,微生物和矿物的表面性质如表面电荷、疏水性和它们所处的环境条件如pH、电解质浓度、温度等,都影响着矿物-微生物吸附(粘附)过程.微生物细胞或酶可吸附于矿物表面,其结果是细胞代谢或酶活性会发生明显变化,并进一步影响土壤中诸多相关的生态、环境过程.结合4种典型的初始吸附理论:表面自由能热力学理论、DLVO理论、吸附等温线理论和表面复合物理论及本课题组近年来的研究成果,对土壤矿物与微生物相互作用的类型、机理、作用力和现代研究技术等方面的最新研究进展进行了较为全面的论述,对土壤矿物-微生物相互作用的环境效应进行了讨论,并就该领域今后研究工作的特点及应关注的问题进行了展望.     

土壤微生物对气候变暖和大气N沉降的响应

气候变暖和大气N沉降是近一、二十年来人们非常关注的全球变化现象,它们所带来的一系列生态问题已成为全球变化研究的重要议题。它们不仅影响地上植被生长和群落组成,还直接或间接地影响土壤微生物过程,而土壤微生物对此做出的响应正是生态系统反馈过程中非常重要的环节。该文分别从气候变化对土壤微生物的影响(土壤微生物量、微生物活动和微生物群落结构)和土壤微生物对气候变化的响应(凋落物分解、养分利用与循环以及养分的固持与流失)两个角度,综述近期土壤微生物对气候变暖和大气N沉降响应与适应的研究进展。气候变暖和大气N沉降对土壤微生物的影响更多地反映在微生物群落的结构和功能上,而土壤微生物量、微生物活动和群落结构的变化又会通过改变凋落物分解、养分利用和C、N循环等重要的土壤生态系统功能和过程做出响应,形成正向或负向反馈,加强或削弱气候变化给整个陆地生态系统带来的影响。然而,到目前为止土壤微生物的响应对陆地生态系统产生的最终结果仍是未决的关键性问题。     

水分条件变化对土壤微生物的影响及其响应机制研究进展

土壤微生物在维持陆地生态系统服务中扮演着重要的角色.土壤水分条件是影响微生物活性与生态系统功能的重要因素之一,全球气候变化所引起的极端干旱与降雨必将加速土壤水分的剧烈变化.由于不同土壤微生物对干旱胁迫的耐受性不同及其对水分变化的响应差异,使得土壤水分条件变化直接改变了土壤微生物活性与群落结构,进而对微生物介导的关键过程与土壤生态系统功能造成深刻的影响.因此,全面深入地理解水分条件变化下土壤微生物群落的结构变化特征与响应机制具有重要意义.本文在总结土壤水分条件变化对土壤微生物活性(土壤呼吸与酶活性)和微生物群落结构的影响的基础上,进一步阐述了土壤微生物对干旱胁迫与水分条件变化的响应机制和生态学策略,包括: 1)积累胞内溶质、产生胞外聚合物、进入休眠状态等应对干旱胁迫的细胞生理策略;2)微生物之间、微生物与植物之间相关抗逆性基因的转移及土壤微生物群落的功能冗余等应对水分变化的微生物机制.研究水分条件变化下土壤微生物群落结构及生态系统功能之间的内在联系,不仅有助于进一步剖析微生物介导的土壤生态过程,而且能够为今后陆地生态系统对气候变化的响应研究和模型预测提供理论依据.     

土壤溶解性有机质生物降解研究进展

溶解性有机质(DOM)是土壤有机质中最容易被微生物利用的一部分, 是土壤微生物代谢重要的物质和能量来源。DOM 的生物降解反映了其稳定性及在物质、能量代谢中的作用, 对土壤的碳循环和大气的温室效应有重要影响。目前, 有关DOM 生物降解的研究主要集中在降解过程的表征及其影响因素两大方面, 该文对相关问题进行了综述。表征指标可以归纳为降解率、降解速率、半衰期等矿化动力学指标和光谱指标两大类; 降解过程直接取决于DOM 分子大小、结构和微生物群落、数量和活性等直接影响因素, 而土层深度、土壤湿度、温度、土地利用和管理方式、pH等间接因素通过影响DOM 的组成结构及微生物的性质进而影响DOM 的降解过程。在此基础上, 论文指出了目前国内研究中存在的问题, 并提出了进一步研究的方向。     

森林次生演替和土壤层次对微生物群落结构的影响

森林次生演替与生态系统结构和功能的动态变化密切相关。大多数研究主要关注植物群落以及土壤有机碳(SOC)的变化,然而土壤微生物群落如何响应森林次生演替还需要进一步探究。本研究以长白山森林次生演替序列(20、80、120、200和≥300年)和两个土壤层次为对象,采用磷脂脂肪酸微生物标志物,探究温带森林次生演替过程中地下微生物群落结构变化。森林次生演替改变了土壤微生物群落结构,主要归因于某些特定微生物类群的变化,演替前期革兰氏阴性菌和腐生真菌占主导,而在演替后期革兰氏阳性菌和丛枝菌根真菌占主导。另外,土壤有机质数量和质量差异是影响微生物群落结构和生物量的主要环境因素。森林演替前期和中期增加的SOC含量促进了微生物生物量,而演替后期增加的难分解芳香族有机组分抑制了微生物生物量合成。土壤层次间理化性质的差异导致微生物群落变化,有机质层高的SOC以及氮含量导致更多微生物生物量的合成。微生物群落在时间和空间尺度的变化及其驱动因素反映了生态系统结构和功能对环境变化的响应。     

Endophyte-assisted phytoremediation: mechanisms and current application strategies for soil mixed pollutants

Abstract

Phytoremediation uses plants and associated microbes to remove pollutants from the environment and is considered a promising bioremediation method. Compared with well-described single contaminant treatments, the number of studies reporting phytoremediation of soil mixed pollutants has increased recently. Endophytes, including bacteria and fungi, exhibit beneficial traits for the promotion of plant growth, stress alleviation, and biodegradation. Moreover, endophytes either directly or indirectly assist host plants to survive high concentrations of organic and inorganic pollutants in the soil. Endophytic microorganisms can also regulate the plant metabolism in different ways, exhibiting a variety of physiological characteristics. This review summarizes the taxa and physiological properties of endophytic microorganisms that may participate in the detoxification of contaminant mixtures. Furthermore, potential biomolecules that may enhance endophyte mediated phytoremediation are discussed. The practical applications of pollutant-degrading endophytes and current strategies for applying this valuable bio-resource to soil phytoremediation are summarized.     

Degradation and metabolism of synthetic plastics and associated products by Pseudomonas sp.: capabilities and challenges

Synthetic plastics, which are widely present in materials of everyday use, are ubiquitous and slowly‐degrading polymers in environmental wastes. Of special interest are the capabilities of microorganisms to accelerate their degradation. Members of the metabolically diverse genus Pseudomonas are of particular interest due to their capabilities to degrade and metabolize synthetic plastics. Pseudomonas species isolated from environmental matrices have been identified to degrade polyethylene, polypropylene, polyvinyl chloride, polystyrene, polyurethane, polyethylene terephthalate, polyethylene succinate, polyethylene glycol and polyvinyl alcohol at varying degrees of efficiency. Here, we present a review of the current knowledge on the factors that control the ability of Pseudomonas sp. to process these different plastic polymers and their by‐products. These factors include cell surface attachment within biofilms, catalytic enzymes involved in oxidation or hydrolysis of the plastic polymer, metabolic pathways responsible for uptake and assimilation of plastic fragments and chemical factors that are advantageous or inhibitory to the biodegradation process. We also highlight future research directions required in order to harness fully the capabilities of Pseudomonas sp. in bioremediation strategies towards eliminating plastic wastes.     

微塑料附着微生物研究进展

近年来,微塑料引起的环境污染已经成为一个全球性的问题,在海洋环境中,微生物可以附着于微塑料表面形成生物被膜。已有研究表明生物被膜可以为生活在其内部的细菌提供保护,被膜中可能富集了对人体或者水生生物有害的致病菌,且频繁的基因交流可能产生更多耐药菌。微塑料表面附着的微生物,能借助大洋环流随微塑料在海洋中迁徙,进而可能引起微生物入侵事件的发生。主要对微塑料与生物被膜之间的相互作用、微塑料与附着在其表面的塑料降解菌、微塑料与致病菌、微塑料对微生物迁徙的影响,以及微塑料表面生物被膜中耐药基因的扩散进行综述,对微塑料附着微生物未来研究方向进行了展望,为更好地了解海洋微塑料污染提供参考。     

A Review of Plastic Waste Biodegradation

ABSTRACT

With more and more plastics being employed in human lives and increasing pressure being placed on capacities available for plastic waste disposal, the need for biodegradable plastics and biodegradation of plastic wastes has assumed increasing importance in the last few years. This review looks at the technological advancement made in the development of more easily biodegradable plastics and the biodegradation of conventional plastics by microorganisms. Additives, such as pro-oxidants and starch, are applied in synthetic materials to modify and make plastics biodegradable. Recent research has shown that thermoplastics derived from polyolefins, traditionally considered resistant to biodegradation in ambient environment, are biodegraded following photo-degradation and chemical degradation. Thermoset plastics, such as aliphatic polyester and polyester polyurethane, are easily attacked by microorganisms directly because of the potential hydrolytic cleavage of ester or urethane bonds in their structures. Some microorganisms have been isolated to utilize polyurethane as a sole source of carbon and nitrogen source. Aliphatic-aromatic copolyesters have active commercial applications because of their good mechanical properties and biodegradability. Reviewing published and ongoing studies on plastic biodegradation, this paper attempts to make conclusions on potentially viable methods to reduce impacts of plastic waste on the environment.     

Perspectives and challenges of micro/nanoplastics‐induced toxicity with special reference to phytotoxicity

Plastic pollution has become a global concern for ecosystem health and biodiversity conservation. Concentrations of plastics are manifold higher in the terrestrial system than the aquatic one. Micro/nanoplastics (M/NP) have the ability to alter soil enzymatic system, soil properties and also affect soil borne microorganisms and earthworms. Despite, the knowhow regarding modulatory effects of plastics are acquired from the study on aquatic system and reports on their phytotoxic potentials are limited. The presence of cell wall that could restrict M/NP invasion into plant roots might be the putative cause of this limitation. M/NP inhibit plant growth, seed germination and gene expression; and they also induce cytogenotoxicity by aggravating reactive oxygen species generation. Dynamic behavior of cell wall; the pores formed either by cell wall degrading enzymes or by plant–pathogen interactions or by mechanical injury might facilitate the entry of into roots M/NP. This review also provides a possible mechanism of large sized microplastics‐induced phytotoxicity especially for those that cannot pass through cell wall pores. As M/NP affect soil microbial community and soil parameters, it is hypothesized that they could have the potential to affect N₂ fixation and research should be conducted in this direction. Reports on M/NP‐induced toxicity mainly focused only on one polymer type (polystyrene) in spite of the toxicological relevancies of other polymer types like polyethylene, polypropylene etc. So, the assessment of phytotoxic potential of M/NP should be done using other plastic polymers in real environment as they are known to intract with other environmental stressors as well as can alter the the soil–microbe–plant interaction.     

土壤中高分子量PAHs微生物降解机理及影响因素研究进展

高分子量多环芳烃( HMW PAHs)分子结构复杂,疏水性强,是环境中广泛存在的难降解的有机污染物.微生物降解是去除HMW PAHs的主要途径.本文介绍了PAHs降解菌株的种类和降解机理,以及不同环境因子(营养元素、pH值、土壤结构、通气状况和复合污染)对HMW PAHs降解的影响,提出HMW PAHs污染土壤的进一步研究的方向与重点,旨在为HMW PAHs污染修复研究和微生物降解机理研究提供参考.     

Biological degradation of plastics: a comprehensive review

Lack of degradability and the closing of landfill sites as well as growing water and land pollution problems have led to concern about plastics. With the excessive use of plastics and increasing pressure being placed on capacities available for plastic waste disposal, the need for biodegradable plastics and biodegradation of plastic wastes has assumed increasing importance in the last few years. Awareness of the waste problem and its impact on the environment has awakened new interest in the area of degradable polymers. The interest in environmental issues is growing and there are increasing demands to develop material which do not burden the environment significantly. Biodegradation is necessary for water-soluble or water-immiscible polymers because they eventually enter streams which can neither be recycled nor incinerated. It is important to consider the microbial degradation of natural and synthetic polymers in order to understand what is necessary for biodegradation and the mechanisms involved. This requires understanding of the interactions between materials and microorganisms and the biochemical changes involved. Widespread studies on the biodegradation of plastics have been carried out in order to overcome the environmental problems associated with synthetic plastic waste. This paper reviews the current research on the biodegradation of biodegradable and also the conventional synthetic plastics and also use of various techniques for the analysis of degradation in vitro.     

Bacteria-mediated PAH degradation in soil and sediment

Polycyclic aromatic hydrocarbons (PAHs) are ubiquitous in the natural environment and easily accumulate in soil and sediment due to their low solubility and high hydrophobicity, rendering them less available for biological degradation. However, microbial degradation is a promising mechanism which is responsible for the ecological recovery of PAH-contaminated soil and sediment for removing these recalcitrant compounds compared with chemical degradation of PAHs. The goal of this review is to provide an outline of the current knowledge of biodegradation of PAHs in related aspects. Over 102 publications related to PAH biodegradation in soil and sediment are compiled, discussed, and analyzed. This review aims to discuss PAH degradation under various redox potential conditions, the factors affecting the biodegradation rates, degrading bacteria, the relevant genes in molecular monitoring methods, and some recent-year bioremediation field studies. The comprehensive understanding of the bioremediation kinetics and molecular means will be helpful for optimizing and monitoring the process, and overcoming its limitations in practical projects.     

Biodegradation of natural and synthetic rubbers: A review

Since polymeric materials do not decompose easily, disposal of waste polymers is a serious environmental concern. Widespread studies on the biodegradation of rubbers have been carried out in order to overcome the environmental problems associated with rubber waste. This report provides an overview on the microbial degradation of natural and synthetic rubbers. Rubber degrading microbes, bacteria and fungi, are ubiquitous in the environment especially soil. The qualitative data like plate assay, scanning electron microscopy (SEM), attenuated total reflectance-Fourier transform infrared spectroscopy (ATR-FTIR) and Sturm test indicated that both natural and synthetic rubbers can be degraded by microorganisms. It has confirmed that the enzymes latex clearing protein (Lcp) and rubber oxygenase A (RoxA) are responsible for the degradation of natural and synthetic rubbers. Lcp was obtained from Gram-positive bacterium Streptomyces sp. strain K30 and RoxA from Gram-negative bacterium Xanthomonas sp. strain 35Y. Analysis of degradation products of natural and synthetic rubbers indicated the oxidative cleavage of double bonds in polymer backbone. Aldehydes, ketones and other carbonyl groups were detected as degradation products from cultures of various rubber degrading strains. This review emphasizes the importance of biodegradation in environmental biotechnology for waste rubber disposal.