Rewiring of the Fruit Metabolome in Tomato Breeding

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Plant Hormone Metabolome and Transcriptome Analysis of Dwarf and Wild-type Banana

Journal of Plant Growth Regulation - Gibberellin (GA), auxin (IAA) and brassinosteroid (BR) are indispensable in the process of plant growth and development. Currently, research on the regulatory...     

Reprogramming of the MicroRNA Transcriptome Mediates Resistance to Rapamycin

The mammalian target of rapamycin (mTOR) is a central regulator of cell proliferation that is often deregulated in cancer. Inhibitors of mTOR, including rapamycin and its analogues, are being evaluated as antitumor agents. For their promise to be fulfilled, it is of paramount importance to identify the mechanisms of resistance and develop novel therapies to overcome it. Given the emerging role of microRNAs (miRNAs) in tumorigenesis, we hypothesized that miRNAs could play important roles in the response of tumors to mTOR inhibitors. Long-term rapamycin treatment showed extensive reprogramming of miRNA expression, characterized by up-regulation of miR-17–92 and related clusters and down-regulation of tumor suppressor miRNAs. Inhibition of members of the miR-17–92 clusters or delivery of tumor suppressor miRNAs restored sensitivity to rapamycin. This study identifies miRNAs as new downstream components of the mTOR-signaling pathway, which may determine the response of tumors to mTOR inhibitors. It also identifies potential markers to assess the efficacy of treatment and provides novel therapeutic targets to treat rapamycin-resistant tumors.     

Transcriptome and Metabolome Profiles Revealed Molecular Mechanisms Underlying Tolerance of Portulaca oleracea to Saline Stress

Russian Journal of Plant Physiology - The purslane Portulaca oleraceae L. can tolerant high saline stress and has been developed as a seawater-irrigated vegetable. Currently, the underlying...     

Alerted Defense System Attenuates Hypersensitive Response-Associated Cell Death in <Emphasis Type="BoldItalic">Arabidopsis siz1</Emphasis> Mutant

Plants defend themselves by inducing sophisticated multilevel defense responses against pathogenic attack. The first line of defense against microbial pathogens is the process of nonself-recognition, which mediates the activation of the necessary defense repertoire. The hypersensitive response (HR), a macroscopic collapse of plant leaves in primary infection site, is one of such plant resistance responses. Subsequently, the HR triggers a general resistance mechanism called systemic acquired resistance (SAR), rendering uninfected parts of the plants less sensitive to further pathogenic attacks. Here, we show that SIZ1 mutation-mediated preexisting SAR attenuates HR-associated cell death in Arabidopsis thaliana. In siz1 mutant, the amount of PR1 and PR5 stayed high level, and the growth of pathogenic bacteria Pseudomonas syringae pv. maculicola (Pma) strain M6CΔE was reduced. Early callose deposition, spontaneous formation of microscopic cell death, and reactive oxygen species (ROS) were also observed in siz1 mutant.     

基于转录组和代谢组分析马齿苋根茎叶中类黄酮代谢

为获取马齿苋(Portulaca oleracea)类黄酮相关成分及其合成酶基因信息,该实验以马齿苋根、茎和叶为材料,进行代谢组学和转录组学联合分析,并从中选取6个差异表达基因进行qRT-PCR验证分析.结果显示:(1)代谢组分析发现,在马齿苋根、茎和叶中共获得32个类黄酮相关化合物,包括3个异黄酮、8个黄酮醇、11个...     

Transcriptome Sequencing and Analysis of Chilling Tolerance Mutant Tomato under Low Temperature

Russian Journal of Plant Physiology - Τhe tomato plant (Lycopersicon esculentum Mill.) is particularly vulnerable to chilling injury. Hence research on screening out the cold-resistance gene...     

植物代谢组学研究进展

代谢组学是继基因组学、转录组学和蛋白质组学之后发展起来的一门学科,通过对细胞内的基因表达最终代谢产物的定性和定量分析以及定义细胞或器官的生化表现类型来解释功能基因的表达过程。文中就代谢组学的发展历史、主要研究内容、技术特点、数据处理过程及在植物领域中的应用的最新进展几方面进行阐述,以供读者参考。