Growth of a grazing phytoplanktivorous fish and growth enhancement of the grazed alga

Summary The blue tilapia, Tilapia aurea, consumes the green alga, Ankistrodesmus falcatus, with some algal cells passing through the gut in viable condition. Grazing fish grew and the grazed algal populations had enhanced densities compared to ungrazed populations. Algal growth enhancement was not produced by either bacteria or fish excreting an algal limiting nutrient. Possible ingestion and digestion of bacterial cells by the fish might release nutrients to the algal cells that were otherwise unavailable. Blue tilapia may be affecting algal communities in ways other than by passive size selection. Enhancement of algal growth by the blue tilapia could have important implications for understanding the phytoplankton dynamics in waters containing blue tilapia.     

Nitrogen budgets for three cropping systems fertilised with cattle manure

A field plot experiment was set up on a sandy loam soil of SW England in order to determine the efficiency of nitrogen use from different cattle manures. The manure treatments were low and high dry matter cattle slurries and one farmyard manure applied at a target rate of 200 kg total N ha(-1)year(-1), and an untreated control. There were three different cropping systems: ryegrass/clover mixture, maize/rye and maize/bare soil, which were evaluated during 1998/99 and 1999/00. Measurements were made of N losses, N uptake and herbage DM yields. Result showed that manure type had a significant effect on N utilisation only for maize. N balances were negative in maize (approximately -247 to -10 kg N) compared to grass (approximately 5-158 kg N). Agronomic management was more important than manure type in influencing N losses, where soil cultivation appeared to be a key factor when comparing maize and grass systems.     

Lipids in Acanthodiaptomus denticomis during starvation and fed on three different algae

Variations in the levels of triglycerides, wax esters and polarlipids were determined in adults of the calanoid copepod Acanthodiaptomusdenticornis when freshly caught, starved or fed on the followingalgae: Anabaena spiroides, Cyclotella pseudostelligera and Pediastrumduplex. Over 7 days starvation, triglycerides and wax esterswere almost entirely used up by the copepods. Subsequent feedingover 20 days partially restored triglycerides but restored onlya relatively small fraction (<20%) of wax esters in the animals.Differences in the lipid restoration were found: the restoredtriglyceride level was higher in animals feeding on Cyclotellapseudostelligera or Pediastrum duplex than in those feedingon Anabaena spiroides. Fatty acid composition of neutral lipidswas closely linked to fatty acid composition of algae. The resultssuggest that lipid and fatty acid contents of Acanthodiaptomusdenticornis are good indices of the copepod's nutritional statusand short-term (0–20 days) feeding history.     

Anglers' records as a tool for assessing changes in fish populations

Published anglers’ records from Polish rivers between 1966–1991 were used to show shifts in body weight of two obligatory riverine species: barbel [Barbus barbus(L.)], and chub [Leuciscus cephalus (L.)]. The body weight of barbel significantly decreased while that of chub did not. In 1966–89, the quality of inland waters continuously decreased, a result mainly from nutrient element input (domestic and agricultural). Hence, we consider two factors which were mainly responsible for reduction in fish size: overfishing and, perhaps, eutrophication.     

Density and size distribution of Daphnia populations at different fish predation levels

Density and size structure changes of natural daphniids populations were studied in enclosures with a different level of fish predation. Daphnia pulicaria was totaly removed in high predation variants, and the differences of the mean body length both in adults and juveniles are apparent between low predation enclosure and enclosure without fish. Daphnia galeata was replaced by D. magna and D. pulicaria in the enclosure without fish. The decline of densities and the substantial (30–50%) and fast (during 12 days) shift of mean body length both in adults and juveniles of D. galeata was induced by the fish (carp fry) introduction to the high predation enclosures.     

Determination of beta-defensin genomic copy number in different populations: a comparison of three methods

Background

There have been conflicting reports in the literature on association of gene copy number with disease, including CCL3L1 and HIV susceptibility, and β-defensins and Crohn''s disease. Quantification of precise gene copy numbers is important in order to define any association of gene copy number with disease. At present, real-time quantitative PCR (QPCR) is the most commonly used method to determine gene copy number, however the Paralogue Ratio Test (PRT) is being used in more and more laboratories.

Findings

In this study we compare a Pyrosequencing-based Paralogue Ratio Test (PPRT) for determining beta-defensin gene copy number with two currently used methods for gene copy number determination, QPCR and triplex PRT by typing five different cohorts (UK, Danish, Portuguese, Ghanaian and Czech) of DNA from a total of 576 healthy individuals. We found a systematic measurement bias between DNA cohorts revealed by QPCR, but not by the PRT-based methods. Using PRT, copy number ranged from 2 to 9 copies, with a modal copy number of 4 in all populations.

Conclusions

QPCR is very sensitive to quality of the template DNA, generating systematic biases that could produce false-positive or negative disease associations. Both triplex PRT and PPRT do not show this systematic bias, and type copy number within the correct range, although triplex PRT appears to be a more precise and accurate method to type beta-defensin copy number.     

Application of phytoremediation technology in decontamination of a fish culture pond fed with coal mine effluent using three aquatic macrophytes

Abstract

In the present study, three aquatic macrophytes, Eichhornia crassipes, Salvinia molesta, and Pistia stratiotes were used to assess their relative efficacies in decontamination of a fish culture pond, regularly fed with coal mine effluent (CME). The level of metals like Fe, Mn, Ni, Zn, Cu, Pb, Cr, and Cd were much higher in CME-fed pond water than their recommended limits in drinking water set by the Bureau of Indian standards and in effluents by the Environmental Protection Agency. The levels of metal were lowered substantially in CME-fed pond water after exposure of the above plants to such water, however, metal levels in the plants increased tremendously. The increased metal levels in plants severely damaged their physiological and biochemical processes. The contents of chlorophyll a, b and carotenoid were reduced by 63.2, 64.2, and 46.3%, respectively, in E. crassipes, 41, 57.4, and 57.8% in S. molesta, and 42, 62, and 61% in P. stratiotes. The accumulating metals also generated oxidative stress in plants, as evident from the increased superoxide dismutase and catalase activities and enhanced malondialdehyde content. The E. crassipes was the most potent in absorbing the metals from the CME-fed pond water, followed by S. molesta and P. stratiotes.     

Hemochromatosis gene variants in three different ethnic populations: effects of admixture for screening programs

Genetic testing for hemochromatosis may have important implications for diagnosis and screening of the disease. However, the relative importance of mutations in the gene for hereditary hemochromatosis, HFE, may vary among populations, when the mutant allele frequencies and their penetrance in a particular genetic and environmental background are taken into account. We present data on the allele and genotype frequencies and population structure of two HFE genetic variants in three different ethnic groups from a highly mixed urban population (S?o Paulo, Brazil). Allele frequencies for both the C282Y and H63D HFE mutations showed significant differences among the studied populations (for the C282Y mutation, Euro-Brazilian 3.7%, admixed 0.7%, Afro-Brazilian 0.5%; and for the H63D mutation, Euro-Brazilian 20.3%, admixed 13.0%, Afro-Brazilian 6.4). The data substantiate a European origin for these mutations. Furthermore, they provide a basis for a more rational strategic planning of population screening programs for the disease.     

A comparative study of gut microbiota profiles of earthworms fed in three different substrates

The gut microbiome of earthworms has a complex interdependence with the host. When the soil minerals pass through earthworm’s gut, they may affect the gut microbiota. To gain insight into the response of gut microbiota to the passed minerals, we fed earthworm (Eisenia fetida) on nutrient-poor soil and ore powder, and used high throughput sequencing to characterize the earthworm intestinal microbial community to find evidence for a core bacterial community of the E. fetida. The results showed that earthworms’ gut maintained a core microbiome that appeared in all samples. These core microbiota may play a significant role in a species’ environmental interactions. The composition of intestinal microbiomes varied with substrates. The earthworm guts from two nutrient-poor substrates had similar microbial communities and they were different from nutrient-rich substrate. Proteobacteria and Bacteroidetes were more abundant in the gut of earthworms kept on a nutrient-poor substrate such as ore powder or mineral soil than in the gut of earthworms kept in organic-rich compost soil; some of these microorganisms may help earthworms survive in nutrient-poor substrates.     

The functional grazing response of a phytoplanktivorous fish Oreochromis mloticus to mixtures of toxic and non-toxicstrains of the cyanobacterium Microcystis aeruginosa

Small (10 g) tilapia ( Oreochromis niloticus ) were exposed to pure and mixed populations of toxic and non-toxic strains of the cyanobacterium Microcystis aeruginosa (100% toxic, 50% toxic, 25% toxic, 0% toxic) at two particle concentrations (1 × 10⁶ and 5 × 10^sparticles ml⁻¹). At both concentrations there was a progressive decrease in grazing rate as the percentage of toxic cells increased. Differences in opercular beat rates, and hence the volumes of water passed over the gills, were also recorded among treatments, opercular beat rates decreasing as the percentage of toxic cells increased. Although in all treatment groups with toxic cells present, the medium had detectable levels (>250 ng I⁻¹) of extracellular microcystin-LR toxin present, grazing was correlated with particle-bound rather than extracellular levels.     

Quantifying stress responses induced by different handling methods in three species of fish

Although interest in fish welfare is growing, little research has addressed the welfare of laboratory or ornamental fish. Our aim here was to evaluate the effects of handling fish with a scoop, where the fish remained submerged in water, compared to handling with a net. We investigated the effect of the scoop vs. a dip-net in three different species: three-spined sticklebacks (Gasterosteus aculeatus), Panamanian bishops (Brachyraphis episcopi) and rainbow trout (Oncorhynchus mykiss) using a variety of assays. The results demonstrate that keeping fish within water in a scoop while transferring them between tanks can, but not always, decrease the negative effects of handling on stress responses.     

Analysis of translocations observed in three different populations. II. Robertsonian translocations

A sample of 229 Robertsonian translocations was classified into three groups according to the method of their ascertainment (Group I = couples with repeated abortions; Group II = karyotypically unbalanced probands; Group III = balanced translocation heterozygotes). Statistical analysis showed that the distributions of Robertsonian translocations differed significantly from random in all three groups. Additionally, the distributions were significantly different between couples with repeated abortions and karyotypically unbalanced probands and between unbalanced probands and balanced translocation heterozygotes.     

Rhodnius prolixus vitellin is composed of three different populations: comparison with vitellogenin

Rhodnius prolixus oocyte extracts were chromatographed on an ion exchange column in order to purify vitellin (VT). Three VT heterogeneous populations were identified and named VT(1), VT(2), and VT(3) according to their order of elution from the column. The phosphate content of each population was determined, after lipid extraction, and a heterogeneous distribution was found: VT(1) being the less phosphorylated (50 mol P/mol protein) and VT(3) the heavily phosphorylated population (281 mol P/mol protein). Analysis of radioactivity associated with each VT population purified from animals fed with (32)Pi showed the same phosphorylation profile. Due to the fact that vitellogenin is the known precursor of VT, we have also chromatographed 32P-VG in the same way as we purified VT. Only one VG's population was detected and resembled to VT(3) with respect to its elution profile. All VT populations contain the same neutral lipids, but they were heterogeneous with respect to phospholipid composition. VT(1) presents phosphatidylcholine and phosphatidylethanolamine whereas VT(2) and VT(3) also showed cardiolipin and probably phosphatidylserine. Sugar composition of VT(2) and VT(3) includes mannose as the main associated carbohydrate but VT(1) also contains glucose resembling VG. Although VG and VT are similar with respect to the elution profile, their sugar composition is different. These results suggest a post-endocytosis processing on VG molecule. The possible biological function of VT heterogeneous populations is discussed.     

Analysis of translocations observed in three different populations. I. Reciprocal translocations

A sample of 437 reciprocal translocations was classified into three groups according to their method of ascertainment (Group I = couples with repeated abortions; Group II = karyotypically unbalanced carriers; Group III = balanced translocation heterozygotes). Statistical analysis showed that the distributions of chromosome breaks observed in the three groups could not be accounted for by chromosome arm length alone. In couples with repeated abortions, an excess of breaks in 7p, 17p, and 22q was found, whereas in the balanced translocation heterozygotes an excess of breaks was found only in 11q. An excess of breaks was found in arms 9p, 14p, 18p, 18q, 21q, and 22q in karyotypically unbalanced probands. A significant decrease of breaks in the medial chromosome regions was accompanied by a concomitant increase in the terminal regions in all groups. The three groups demonstrated different distributions of chromosome arm involvement in the observed translocations. Balanced translocation heterozygotes had the highest frequency of large (greater than the length of 4p) translocated segments and an excess in the frequency of large-large translocations, whereas karyotypically unbalanced probands had the highest frequency of small (shorter than 21q) translocations and an excess in the frequency of small-small translocations. For each type of chromosomal imbalance observed, the balanced translocation heterozygotes demonstrated the greatest potential imbalance and the karyotypically unbalanced probands the least.     

Competition and adaptation in a community of migrating fish populations

Within a discrete scheme, the process of population migration is set by some nonnegative Markov matrix. In studying an appropriate class of competition models, nonlinear methods of convex analysis (monotone operator theory) prove to be highly effective. For special matrices (cyclic and perron ones), conditions of steady coexistence in and of competitor displacement from the community have been found. Model mechanisms of migration route adaptation for a separate population and for a family of populations from one vertical trophic chain have been proposed. The major characteristic of a migration route turns out to be the relative time of population dwelling in one or another region. Specific (perron) vectors of migration matrices correspond to these populations. It is revealed that in the course of co-adaptation the perron vectors of predator and prey migration matrixes practically coincide.     

Patterns of connectivity among populations of a coral reef fish

Knowledge of the patterns and scale of connectivity among populations is essential for the effective management of species, but our understanding is still poor for marine species. We used otolith microchemistry of newly settled bicolor damselfish (Stegastes partitus) in the Mesoamerican Reef System (MRS), Western Caribbean, to investigate patterns of connectivity among populations over 2 years. First, we assessed spatial and temporal variability in trace elemental concentrations from the otolith edge to make a ‘chemical map’ of potential source reef(s) in the region. Significant otolith chemical differences were detected at three spatial scales (within-atoll, between-atolls, and region-wide), such that individuals were classified to locations with moderate (52 % jackknife classification) to high (99 %) accuracy. Most sites at Turneffe Atoll, Belize showed significant temporal variability in otolith concentrations on the scale of 1–2 months. Using a maximum likelihood approach, we estimated the natal source of larvae recruiting to reefs across the MRS by comparing ‘natal’ chemical signatures from the otolith of recruits to the ‘chemical map’ of potential source reef(s). Our results indicated that populations at both Turneffe Atoll and Banco Chinchorro supply a substantial amount of individuals to their own reefs (i.e., self-recruitment) and thus emphasize that marine conservation and management in the MRS region would benefit from localized management efforts as well as international cooperation.