Macroinvertebrates along the Serbian section of the Danube River (stream km 1429–925)

Results of the investigation of the aquatic macroinvertebrate fauna along a 504 km stretch of the Danube River in Serbia are presented. A total of 74 macroinvertebrate taxa were observed during a 2001 survey. Oligochaeta and Mollusca were the principal components of the community with regard to species richness and abundance. Based on data on the qualitative composition of the macroinvertebrate fauna, a correspondence analysis divided the investigated stretch in three sectors — upper (Pannonian), Iron Gate sector and entrance sector to the Iron Gate stretch. The distribution patterns of certain species supported the division of sectors defined by correspondence analysis.     

Parasitofauna of freshwater fishes in the Serbian open waters: a checklist of parasites of freshwater fishes in Serbian open waters

As a result of freshwater fish parasitofauna investigations, throughout the past 75 years, the number of parasitic species is presented. This paper reviews the history, current state, and tendencies of the fish parasitofauna studies in Serbian open waters. Up to now, in total 170 parasitic species have been reported. Systematic parasitofauna investigations have been carried out on 54 freshwater fish species in waters of the Danube River Basin in Serbia, also in hill-mountanious watercourses, lakes and salmonid fishpond of Sjenicko-Pesterska plateau (south-west region of Serbia), Homolje area (east Serbia), and in Vlasina lake (south-east Serbia). This data review pointed that it is necessary to continue the investigation on fish parasites in Serbia. The data on freshwater fish parasites are important for evaluation of general influence on the community structure.     

Oligochaeta of the Danube River — a faunistical review

The aim of this work is to discuss the distribution of Oligochaeta (Annelida) in the Danube River using the collections made by the Joint Danube Survey 2007 (JDS2) on more than 2800 km of the river. The basic faunistical features of the oligochaete assemblages were analysed with regard to three main sectors of the Danube (upper, middle and lower reaches, the last with the Danube Delta). A total of 52 oligochaete taxa have been recorded. Most of the observed species are typical of the potamon-type rivers in the region, and are well adapted to moderate-to-high organic load. The highest taxa richness and frequency of occurrence were observed among the Tubificidae family. Naididae, Propappidae, Enchytraeidae and Haplotaxidae had also low frequency. The upper reach of the Danube showed the lowest species richness, while the middle reach is characterised by its highest species richness. Construction of dams and regulation of the riverbed have resulted in an increase of limno(rheo)philic taxa which prefer slow-flowing and lentic zones.     

Epigean communities of harvestmen (Opiliones) in Pannonian Basin floodplain forests: an interaction with environmental parameters

During the years 2015–2016, we studied the fauna of epigeon in eight similar habitats in Slovakia and Serbia. The study material of Opiliones was obtained by a pitfall trap method. We focused on the comparison of the incidence of harvestmen in floodplain forests and ecotones alongside the Danube River in Slovakia and along the Tisa and Begej River in Serbia. We examined their dependence on anthropogenic impact (frequency of visits), cover of vegetation layers (herbs, shrubs and trees), plant diversity of vegetation layers, area of forest stands, distance to the forest edge, circumference of forest stands, age of forest stands, thickness of litter layer and physico-chemical properties of soil and litter (pH, conductivity, P, N, C, H). Total epigeic activity of harvestman showed significant positive relationship with proportion of N in litter. Community equitability was positively related with species richness of plant communities in shrub layer and negatively related with H content of soil. We did not find any significant correlations between diversity of harvestman communities and measured environmental characteristics.     

Stream section types of the Danube River in Serbia according to the distribution of macroinvertebrates

The aim of this study was to use the data on the distribution of aquatic macroinvertebrates obtained from 14 sites within a 413 km long stretch of the Danube River in Serbia to show the relevance of the bordering zone between the Middle and Lower Danube. A total of 68 macroinvertebrate taxa were observed. Molluscs were the major component with regard to species richness and relative abundance. Lithoglyphus naticoides (C. Pfeiffer, 1828) was the most abundant species and Unio tumidus (Retzius, 1788) was the most frequent species. Product-moment correlation coefficients or Pearson r coefficient was used to analyse the relation between the sites based on macroinvertebrate distribution. The data obtained by product-moment correlation served as input for cluster analyses. According to a cluster analyses Danube River in Serbia could be separated in the free-flowing sector, the stretch with a backwater effect and the area of the Iron Gate.     

Aquatic macrophytes and water current velocity in the Danube River

Water currents are among the strongest environmental variables determining the occurrence and/or abundance of aquatic plants and the European Water Framework Directive (WFD) considers river morphology and current conditions important aspects of reference conditions. We used the database of the Joint Danube Survey JDS-2, organised by the International Commission for the Protection of the Danube River (ICPDR, Vienna), to assess the relationship between water flow velocity and the occurrence and abundance of aquatic macrophyte to be species along the navigable reach of the Danube River. Species abundance was assessed in accordance with European Standard EN 14184-2003. Flow velocities were assessed close to the plant stands and estimated in 4 classes, worked out in earlier studies in combination with flow meter measurements, which is appropriate for the conditions in this large river. Statistical analysis revealed that only survey units with either no visible flow or those with fast flow were characterised by indicator species with high significance. Still water conditions or barely visible flow (flow class 1) were indicated by Potamogeton friesii, Nitellopsis obtusa and Trapa natans, and by Potamogeton perfoliatus, Potamogeton nodosus and Stuckenia pectinata. Lemna minor, indicative for flow class 1 as well, was detected in all the other flow classes, too: in all these cases it established its stands closely intermingled with other aquatic species. For survey units with slow (flow class 2) or intermediate flow (flow class 3). No statistically significant indicator species could be determined. The highest flow velocities (flow class 4) were significantly indicated by Fissidens rufulus, Cinclidotus fontinaloides and Cinclidotus riparius. Occurrence of aquatic mosses was also highly related to the Berger–Parker dominance index in NMDS analysis. In the same analysis, but towards the smallest flow velocities, the majority of vascular species and the Simpson diversity index were closely related. The spectrum of life forms was considerably reduced under medium and high flow velocity conditions. With regard to Simpson species diversity, our analysis indicates an agglomeration of diversity in the Middle Danube reach that includes the Iron Gates impoundment. Our results offer a first look at the macrophyte/water flow relationship of a very large river in Europe, the Danube.     

Austrian gudgeons of the genus Gobio (Teleostei: Gobionidae): A mixture of divergent lineages

Gudgeons of the genus Gobio are small Eurasian fishes whose systematics, taxonomy, and phylogenetic relationships have been the matter of a long-standing debate. Two species, Gobio gobio and G. obtusirostris have been reported for Austria, with a potential hybrid zone in the upper Danube. Phylogenetic and phylogeographic analysis of mitochondrial cytochrome oxidase subunit I and control region sequences, as well as nuclear ribosomal protein S7 sequences, however, shows that the proposed hybrid zone is not restricted to the upper Danube, but spans large parts of the Austrian Danube system (upper Danube, Rába & Mur systems). Moreover, our data show that also a third lineage, closely related to species from the southern Balkan, contributed to the gene pool of Austrian Gobio. Patterns of intra-lineage genetic diversity indicate that the distinct Gobio lineages expanded their distribution recently (most likely post-glacially) to come into secondary contact and hybridize in the Danube system.     

Floristic composition of Jandaf Mountain as biodiversity hotspot area in southwestern Saudi Arabia

Arid environments around the world are characterized by lower plant diversity. However, some specific locations have relatively high species richness and have significant importance in terms of vegetation structure and plant diversity. Jabal Al-Jandaf is located in an arid area within the eastern side of mountainous region in the southwest of Saudi Arabia. It consists of valleys, lower plain and upper plain habitats with unique and diverse vegetation. These habitats range from 1000 m above sea level near the Tarj valley to 1910 m at the summit. In this study, we conducted a first survey of the floristic diversity at Jandaf Mountain. Furthermore, we applied the criteria of the Important Plant Area (IPA) and the High Conservation Value (HCV) approaches to assess whether the plant community at Jandaf Mountain qualifies as a significant conservation area. We found that the study area has great plant diversity with plant composition varying among the different habitats (e.g., valleys, upper and lower elevations) within the study area. We recorded 118 species from 97 genera belonging to 42 families, including endemic (e.g. Aloe pseudorubroviolacea), near-endemic (e.g. Monolluma quadrangular), and endangered species (e.g. Dracaena serrulata, Combretum molle, and Moringa peregrine). The plant diversity at Jandaf Mountain achieves the criteria outlined in the IPA and HCV approaches. Therefore, we conclude that Jandaf Mountain has a unique vegetation structure, and the area qualifies for conservation as a high value area for biodiversity and conservation of global significance.     

A trait‐based plant economic framework can help increase the value of reforestation for conservation

While reforestation is gaining momentum to moderate climate change via carbon sequestration, there is also an opportunity to use tree planting to confront declining global biodiversity. Where tree species vary in support of diversity, selecting appropriate species for planting could increase conservation effectiveness. We used a common garden experiment in Borneo using 24 native tree species to examine how variation among tree species in their support of beetle diversity is predicted by plant traits associated with “acquisitive” and “conservative” resource acquisition strategies. We evaluate three hypotheses: (1) beetle communities show fidelity to host identity as indicated by variation in abundance and diversity among tree species, (2) the leaf economic spectrum partially explains this variation as shown by beetle preferences for plant species that are predicted by plant traits, and (3) a small number of selected tree species can capture higher beetle species richness than a random tree species community. We found high variation among tree species in supporting three highly intercorrelated metrics of beetle communities: abundance, richness, and Shannon diversity. Variation in support of beetle communities was predicted by plant traits and varied by plant functional groups; within the dipterocarp family, high beetle diversity was predicted by conservative traits such as high wood density and slow growth, and in non‐dipterocarps by the acquisitive traits of high foliar K and rapid growth. Using species accumulation curves and extrapolation to twice the original sample size, we show that 48 tree species were not enough to reach asymptote levels of beetle richness. Nevertheless, species accumulation curves of the six tree species with the highest richness had steeper slopes and supported 33% higher richness than a random community of tree species. Reforestation projects concerned about conservation can benefit by identifying tree species with a disproportional capacity to support biodiversity based on plant traits.     

Description of a new species of Phoxinus from the upper Krka River (Adriatic Basin) in Croatia (Actinopterygii: Leuciscidae), first discovered as a molecular clade

Using morphometric, meristic and qualitative characters, we confirmed a specific status of a clade discovered based on molecular data only. The newly described species Phoxinus krkae has a very local distribution in the upper Krka River but is easily morphologically distinguished from geographically neighbouring species with much wider ranges: Phoxinus lumaireul, Phoxinus marsilii and Phoxinus csikii. Phoxinus krkae is well differentiated in statistical analyses and differs from other species of Phoxinus in northern Adriatic Sea drainages and right-bank tributaries of the middle and lower River Danube by a combination of characters, none of them unique: caudal peduncle length 1.9–2.2 times minimum depth of caudal peduncle; upper lip not projecting beyond lower lip; rostral fold absent; total number of scales in lateral series 74–84; lateral line incomplete and interrupted, commonly 17–49 (< 60% of total number of scales in lateral series) with no or few canal segments on posterior body and caudal peduncle; scales on belly extending forward to over middle of distance between pelvic-fin base and pectoral-fin origin; patches of breast scales commonly connected by scattered scales or forming 1–3 regular rows of scales; total vertebrae commonly 38–39 (22 + 17, 22 + 16 or 21 + 17). The study reveals unrecognised morphological diversity within the group and provides the groundwork for future taxonomic study in Phoxinus in the Adriatic region and the Danube Basin.     

Abundance and diversity of tidal marsh plants along the salinity gradient of the San Francisco Estuary: implications for global change ecology

From 2003 through 2005, tidal marsh plant species diversity and abundance on historically surveyed vegetation transects along the salinity gradient of the San Francisco Estuary were investigated to establish empirical relationships between plant distributions and environmental conditions, and furthermore to examine and predict past and future plant distribution changes. This study suggests that for most species, salinity is the primary control on plant distribution. Thus, ongoing changes in estuarine conditions (increasing sea level and salinity) are resulting in a complex mix of plant distribution changes. On the low marsh, where sediment salinity is similar to that of ambient water, halophytic species are replacing salt-intolerant taxa. However, on marsh plains, where increased tidal flooding is moderating high salinity (concentrated by evaporation), halophytic “high marsh” species are being replaced by salt-intolerant “low marsh” taxa. Thus, future changes in plant distributions will hinge on whether marsh sediment accumulation keeps pace with sea level rise.     

Epibenthic fauna dredged from tidal channels in the Wadden Sea of Schleswig-Holstein: spatial patterns and a long-term decline

The epibenthic fauna dredged in the channels of the Wadden Sea of Schleswig-Holstein is dominated by crustaceans. Mean species richness is lower in a southern region (7.6±2.2 species haul⁻¹) which is part of the Elbe estuary and lacks protective barrier islands. A northern region is more marine and is protected by a seaward barrier of high sands. Here mean species richness is 10.9±2.8. Within channels, there is no significant inshore-offshore gradient, and species number does not increase with depth. Stratified sampling near the island of Sylt revealed that abundance and diversity are high along the gentle upper slope (5 m depth) of channels when mussels are present, but low in the absence of mussels. Abundance and diversity are also low along the steeper slope below (at 10 and 15 m depth). In a channel with scattered stones and boulders, highest diversity (16.0±5.1) and dense epibenthic assemblages were encountered along the upper and middle slopes (5 and 10 m). Comparisons with historical surveys suggest that a decline of nearly fifty percent of all epifaunal species within the last hundred years may be attributed to fishery disturbances.     

How dams on the River Danube might have caused hybridization and influenced the appearance of a new cyprinid taxon

Synopsis When a new species is found, or a known one collected outside its recognized distribution, most people either assume that the species has been overlooked in the past or that it has recently invaded the area in question from elsewhere. While other, more evolutionary explanations are possible, these are nearly always ignored, in spite of the common perception that animals are constantly in states of change. Recent findings in the Danube River are used as examples for such alternative interpretations. The case of two forms of Vimba — short and long snouted — which live in sympatry in the upper Danube is dispelled, as one of them is identified as a hybrid between female V. vimba and male Blicca bjoerkna. Frequent occurrences of this hybrid (and a few of its backcrosses) in recent times are explained by man-induced alteration of reproductive isolation between their parent species, caused by the impoundment of the river by dams built as part of the Rhein-Main-Donau Kanal. These impoundments, however, might be responsible not only for the creation of hybrids but also for direct speciation, as the case of Gobio albipinnatus may represent. The ability for epigenetic creation of two alternative life-history states (as part of the theory of alprehost) and the survival of an alternative state when environmental conditions change might be ultimately responsible for the appearance of a new taxon.     

Fish and fisheries in the Upper Mekong: current assessment of the fish community, threats and conservation

The Mekong flows north to south, through six countries in south–east Asia. Many studies have concentrated on fish and fisheries in the Lower Mekong, which has been identified as one of the largest inland fisheries in the world with an incredibly rich diversity of species. In contrast, fish and fisheries in the Upper Mekong (Lancang River) have remained relatively undocumented. In this paper, we synthesized information on freshwater fish biodiversity and fisheries in the Upper Mekong and documented 173 species and subspecies (including 87 endemic species) among 7 orders, 23 families and 100 genera. We divided the Upper Mekong into 17 sub-basins based on Digital Elevation Model (DEM) and then used fish species data to cluster the sub-basins. Four parts (the headwater, the upper reach, the middle reach and the lower reach) and one lake have distinct fish species communities associated with them. There was a linear relationship between fish species (x) and endemic species (y) as y = 0.5464x − 3.2926. Relationship between species number or endemic species number (y) and mean altitude (x) can be described as y = −54.352 ln(x) + 460.79 or y = −30.381 ln(x) + 253.85, respectively. Fisheries kept as about 6,000 t from 1989 to 1998, and then steadily increased to 10,000 t in 2004. We reviewed the overall threats to the Upper Mekong fish and fisheries, and found that hydrological alteration is the largest threat in the basin, followed by over fishing and the introduction of exotic species. In terms of specific river sections, water pollution was the most serious threat to fishes in the upper reach of the Upper Mekong, whilst migratory fishes in the lower reach of the Upper Mekong are seriously threatened by the construction of cascade dams. The Buyuan River and the Nanla River were identified as important feeding and spawning habitats for upstream migrant species and should be considered as a priority for conservation.     

Pleuroxus denticulatus (Crustacea: Anomopoda: Chydoridae) a new invader in the Danube Basin

Pleuroxus denticulatus Birge, 1879 is a new invader from Western to Central Europe. Its occurrence in a Danube inundation (Slovak region) probably corresponds with the junction of the Danube and Rhine Rivers. The species was found among ‘the hard macrophytes’ of flowing arms and artificial ponds. A large variability was recorded in the number of valval denticles and in postabdominal denticulation. It is evident that part of the N. American populations is different from European populations. P. denticulatus seems to represent two sibling species. Both are characterised by an angular distal postabdominal corner, bearing 3–4 denticles, and by valval denticles on the postero-ventral corner. This revised version was published online in July 2006 with corrections to the Cover Date.     

Crayfish populations genetically fragmented in streams impounded for 36–104 years

1. Dams and their associated impoundments may restrict dispersal and gene flow among populations of numerous freshwater species within stream networks, leading to genetic isolation. This can reduce effective population sizes and genetic diversity, increasing the risk of local extinction.
2. We studied crayfishes from multiple up- and downstream sites in three impounded and two unimpounded streams in the Bear Creek and Cahaba River drainages, Alabama, U.S.A. Using mitochondrial DNA (cytochrome oxidase subunit I gene) sequence data generated from population-level sampling of two abundant native crayfishes, Faxonius validus and Faxonius erichsonianus (Decapoda: Cambaridae), we assessed species’ spatial genetic structure and genetic diversity, estimated the magnitude and directionality of gene flow, and compared results between the species.
3. For both species, levels of genetic diversity (number of haplotypes, and haplotypic and nucleotide diversity) were the same or higher in impounded compared to unimpounded streams. Conversely, crayfish populations in up- and downstream sections of unimpounded streams displayed high genetic similarity and bidirectional gene flow, whereas in impounded streams, crayfish populations typically had greater up- and downstream genetic differentiation and predominantly unidirectional, downstream gene flow.
4. Although impoundments were associated with lower connectivity between up- and downstream sections for F. validus and F. erichsonianus, the magnitude of genetic effects was species-specific, with greater differentiation between F. validus populations up- and downstream of impoundments.
5. In an ecologically short timeframe, impoundments appear to have fragmented stream crayfish populations, and even species with relatively high abundances and large ranges had lower gene flow among populations in impounded streams compared to unimpounded streams. In addition, feedbacks between genetic and demographic effects on fragmented populations may decrease the probability of long-term persistence.

     

Habitat specificity and diversity of tree species in an African wet tropical forest

Niche differentiation with respect to habitat has been hypothesized to shape patterns of diversity and species distributions in plant communities. African forests have been reported to be relatively less diverse compared to highly diversed regions of the Amazonian or Southeast Asian forests, and might be expected to have less niche differentiation. We examined patterns of structural and floristic differences among five topographically defined habitats for 494 species with stems ≥1 cm dbh in a 50-ha plot in Korup National Park, Cameroon. In addition, we tested for species–habitat associations for 272 species (with more than 50 individuals in the plot) using Torus translation randomization tests. Tree density and basal area were lowest in areas with negative convexity, which contained streams or were inundated during rainy periods and highest in moist well-drained habitats. Species composition and diversity varied along the topographical gradient from low flat to ridge top habitats. The low depression and low flat habitats were characterized by high diversity and similar species composition, relative to slopes, high gullies and ridge tops. Sixty-three percent of the species evaluated showed significant positive associations with at least one of the five habitat types. The majority of associations were with low depressions (75 species) and the fewest with ridge tops (8 species). The large number of species–habitat associations and the pronounced contrast between low (valley) and elevated (ridgetop) habitats in the Korup plot shows that niche differentiation with respect to edaphic variables (e.g., soil moisture, nutrients) contributes to local scale tree species distributions and to the maintenance of diversity in African forests.     

Genetic variation of European grayling (Thymallus thymallus) populations in the Western Balkans

In order to elucidate genetic composition of European grayling (Thymallus thymallus) populations in the Western Balkans, the partial mitochondrial DNA (mtDNA) control region was sequenced and 12 microsatellite loci genotyped in 14 populations originating from tributaries of the Adriatic and Danube drainages. Eleven mtDNA haplotypes were found, one confined to the Adriatic clade, one to the Alpine group and the rest to the ‘Balkan’ grayling phylogenetic clade. Haplotypes from the Balkan clade were confined to the Danube drainage and constituted two groups: northern group with haplotypes found in the Slovenian part of the Danube drainage, and southern group, consisting from Bosnia–Herzegovina and Montenegro. Substantial genetic distance between northern and southern groups of haplotypes (0.75–1.8%) and well supported divisions within the northern group indicate very structured grayling population within the studied Danube basin that most probably did not evolve due to vicariance but rather as a consequence of multiple colonization waves that might have occurred during the Pleistocene. Furthermore, genetic distance of ~4% between Adriatic and Danube populations’ haplotypes, suggest that their separation occurred in mid-Pliocene. These findings imply a complex colonization pattern of the Western Balkans drainages. Microsatellite data also confirm high genetic diversity in Western Balkans populations of grayling (on average 7.5 alleles per microsatellite locus and H _exp 0.58). Limited stocking activities were detected based on microsatellites and mtDNA data. Regarding current knowledge of grayling phylogeography appropriate management strategies were proposed to preserve unique, autochthonous grayling populations in Western Balkan.     

Additive Partitioning of Diversity Reveals No Scale-dependent Impacts of Large Ungulates on the Structure of Tundra Plant Communities

Large herbivores can change ecosystem functioning by impacting plant diversity. However, although such impacts are expected to be scale-dependent in ecosystems with wide-roaming ungulates, scaling issues rarely enter empirical assessments. We here test the hypothesis that the impact of increased reindeer abundance on plant diversity in alpine tundra is scale-dependent. Based on potentially high productivity of the focal habitat units and hence the possibility of positive grazer impacts on plant diversity we predicted higher α and β diversity at the habitat scale where reindeer densities are high. We also explored whether there were differences in diversity patterns at larger scales, including the scale of reindeer management districts. We estimated grazing disturbance as high versus low reindeer density in selected districts (a total extent of 7421 km²) of Northern Norway where reindeer-induced vegetation shifts are debated. We focus on dominance patterns because they can quantify the vegetation state and thus performed additive partitioning of Simpson diversity on multiple scales assessing also species’ contributions to diversity. Contrary to our predictions, we found only weak scale-dependent effects of reindeer grazing on plant diversity. Under high reindeer densities there was evidence for a landscape-scale homogenization of the vegetation, but the predicted α and β diversity increases at the habitat scale were not found. Consistently through all scales considered, four shrub species contributed the most to plant diversity. These results contradict the idea that reindeer at high stocking densities induce shifts in plant species dominance in productive habitats. We conclude that context-dependencies such as spatial scales of management units and habitat types need to be explicitly considered in evaluations of the impacts of large ungulates on plant diversity.     

An approach based on the total‐species accumulation curve and higher taxon richness to estimate realistic upper limits in regional species richness

Most of accumulation curves tend to underestimate species richness, as they do not consider spatial heterogeneity in species distribution, or are structured to provide lower bound estimates and limited extrapolations. The total‐species (T–S) curve allows extrapolations over large areas while taking into account spatial heterogeneity, making this estimator more prone to attempt upper bound estimates of regional species richness. However, the T–S curve may overestimate species richness due to (1) the mismatch among the spatial units used in the accumulation model and the actual units of variation in β‐diversity across the region, (2) small‐scale patchiness, and/or (3) patterns of rarity of species. We propose a new framework allowing the T–S curve to limit overestimation and give an application to a large dataset of marine mollusks spanning over 11 km² of subtidal bottom (W Mediterranean). As accumulation patterns are closely related across the taxonomic hierarchy up to family level, improvements of the T–S curve leading to more realistic estimates of family richness, that is, not exceeding the maximum number of known families potentially present in the area, can be considered as conducive to more realistic estimates of species richness. Results on real data showed that improvements of the T–S curve to accounts for true variations in β‐diversity within the sampled areas, small‐scale patchiness, and rarity of families led to the most plausible richness when all aspects were considered in the model. Data on simulated communities indicated that in the presence of high heterogeneity, and when the proportion of rare species was not excessive (>2/3), the procedure led to almost unbiased estimates. Our findings highlighted the central role of variations in β‐diversity within the region when attempting to estimate species richness, providing a general framework exploiting the properties of the T–S curve and known family richness to estimate plausible upper bounds in γ‐diversity.