Environmental change, phenotypic plasticity, and genetic compensation

When a species encounters novel environmental conditions, some phenotypic characters may develop differently than in the ancestral environment. Most environmental perturbations of development are likely to reduce fitness, and thus selection would usually be expected to favor genetic changes that restore the ancestral phenotype. I propose the term "genetic compensation" to refer to this form of adaptive evolution. Genetic compensation is a subset of genetic accommodation and the reverse of genetic assimilation. When genetic compensation has occurred along a spatial environmental gradient, the mean trait values of populations in different environments may be more similar in the field than when representatives of the same populations are raised in a common environment (i.e., countergradient variation). If compensation is complete, genetic divergence between populations may be cryptic, that is, not detectable in the field. Here I apply the concept of genetic compensation to three examples involving carotenoid-based sexual coloration and then use these and other examples to discuss the concept in a broader context. I show that genetic compensation may lead to a cryptic form of reproductive isolation between populations evolving in different environments, may explain some puzzling cases in which heritable traits exposed to strong directional selection fail to show the expected evolutionary response, and may complicate efforts to monitor populations for signs of environmental deterioration.     

Splenectomy changes the pattern of cytokine production in beta-thalassemic patients

A major cause of morbidity and mortality in beta-thalassemic patients is infections, assumed to be the result of immunological changes. To determine the possible defect, we investigated the cytokine productions by blood cells of beta-thalassemic patients using in-vivo and in-vitro methods. Heparinized blood samples collected aseptically from 22 beta-thalassemic children aged 10-12yrs (half of them were splenectomized). Samples from 10 healthy children served as control group. Part of samples was used for evaluation of plasma IL-2, IL-10 and TGF-beta1. Other part were stimulated with a mixture of LPS and PHA (1 and 10 microg/ml final concentration), for different time period (4, 24, 48 and 72h). Results showed circulating TGF-beta1 of splenectomized patients was significantly higher (p<0.01) than the control group. In-vitro results showed IL-2 production of patients' groups were significantly (p<0.01) lower than corresponding value obtained for the control group. In addition, IL-10 production by splenectomized group were less than other two group (p<0.01), while their TGF-beta1 were higher (p<0.001) at all time points treated. In conclusion, multi-transfusions could be responsible for a change in the subset of circulating lymphocytes that could contribute to a state of partial immune deficiency in beta-thalassemic patients, which is more prominence among the splenectomized patient.     

Mitochondrial energy metabolism and redox state in dyslipidemias

Changes in mitochondrial function are intimately associated with metabolic diseases. Here, we review recent evidence relating alterations in mitochondrial energy metabolism, ion transport and redox state in hypercholesterolemia and hypertriglyceridemia. We focus mainly on changes in mitochondrial respiration, K(+) and Ca(2+) transport, reactive oxygen species generation and susceptibility to mitochondrial permeability transition.     

Climate change,genetic markers and species distribution modelling

Ecologists and biogeographers are currently expending great effort forecasting shifts in species geographical ranges that may result from climate change. However, these efforts are problematic because they have mostly relied on presence‐only data that ignore within‐species genetic diversity. Technological advances in high‐throughput sequencing have now made it cost‐effective to survey the genetic structure of populations sampled throughout the range of a species. These data can be used to delineate two or more genetic clusters within the species range, and to identify admixtures of individuals within genetic clusters that reflect different patterns of ancestry. Species distribution models (SDMs) applied to the presence and absence of genetic clusters should provide more realistic forecasts of geographical range shifts that take account of genetic variability. High‐throughput sequencing and spatially explicit models may be used to further refine these projections.     

西双版纳勐仑地区景观格局变化定量分析

利用景观空间格局定量化分析软件FRAGSTATS和西双版纳勐仑地区1988、2003年两期Landsat影像解译结果,定量分析和比较了两时期景观格局的组成、各类型斑块特征、不同类型斑块间空间分布关系及其动态变化,并进一步分析了其生态效应.结果表明,15年来研究区内以经济林为主的人工景观组分剧烈增加,景观多样性上升;橡胶园等人工种植园地的扩张使得有林地破碎化：平均斑块面积由44km2减至21km2,斑块数由368增至441,同时边缘密度增加;导致其核心区缩小,斑块连接度下降;城镇建设用地的扩展也使得耕地（主要是水田）趋于破碎化.景观中不同斑块的交错分布格局也趋于简单.人工经济林的大面积发展和城市化使该区景观中人为影响显著增强,并产生了生物生境恶化及生态环境质量下降等不良生态效应.未来土地利用规划中应借鉴景观生态学原则,以尽量减少对生态环境的进一步破坏.     

Combination therapy in the management of complex dyslipidemias

PURPOSE OF REVIEW: Patients with dyslipidemias continue to be undertreated in both the primary and secondary prevention settings. Many patients have therapeutic needs that exceed simple reductions in low-density lipoprotein levels using statins. This review discusses the need for comprehensive management of all abnormalities in a given patient's lipoprotein profile and for the use of combinations of anti-lipidemic medications, when indicated. RECENT FINDINGS: The majority of high-risk patients with manifestations of atherosclerotic disease or who have a coronary artery disease risk equivalent are not meeting their various lipoprotein targets. There is considerable reluctance to titrate statins and to use combinations of anti-lipidemic medications in patients not reaching their various lipoprotein targets. Combinations of anti-lipidemic medications can be specifically tailored to address abnormalities in multiple lipoprotein fractions. Recent clinical trials clearly demonstrate that combination therapy is well tolerated and facilitates lipoprotein goal attainment. SUMMARY: Therapeutic approaches that incorporate the use of multiple anti-lipidemic medications should be more widely adopted in order to increase the number of patients able to meet their lipoprotein goals and to produce more substantially reduced risks for acute cardiovascular events.     

Aberrant cytokine pattern of the nasal mucosa in granulomatosis with polyangiitis

Introduction

In granulomatosis with polyangiitis (GPA), a complex autoimmune small-vessel vasculitis frequently associated with chronic necrotizing inflammation of the nasal mucosa, elevated nasal Staphylococcus (S.) aureus carrier rates are a risk factor for relapse. As cytokines are primarily involved in the regulation of defense against potentially pathogenic microorganisms, the aim of this study was to compare healthy individuals and GPA patients with respect to their baseline cytokine expression of nasal epithelial cells (NEC), which form the first barrier against such triggers. The ability of S. aureus to influence the nasal microenvironment''s cytokine secretion was assessed by exemplary stimulation experiments.

Methods

Baseline expression of 19 cytokines of primary NEC of GPA patients and normal controls (NC) was quantified by a multiplex cytokine assay. Stimulation experiments were performed with supernatants of S. aureus and expression of interleukin-8 was determined by ELISA.

Results

In GPA, an altered pattern of baseline cytokine expression with significantly up-regulated G-CSF and reduced interleukin (IL)-8 concentrations was observed. Both NEC of GPA patients and NC responded to stimulation with S. aureus, but GPA patients displayed a significantly lower IL-8 secretion and a diminished dynamic range of response towards the stimulus.

Conclusions

The data presented underline the hypothesis of a disturbed epithelial nasal barrier function in GPA. The dysregulated baseline expression of G-CSF and IL-8 and the reduced response to microbial stimulation may facilitate changes in the composition of the nasal flora and favour an imbalanced inflammatory response, which might be relevant for the disease course.     

浙江汉族人群细胞因子基因多态性分析

为了探讨浙江汉族人群13种细胞因子基因多态性的分布情况, 采用PCR-SSP对100名汉族人群的IL-1α(T/C-889)、IL-1β(C/T-511, T/C+3962)、IL-1R(C/T Pst-I 1970)、IL-1RA(T/C Mspa1-I 1100)、IL-2 (T/G -330, G/T +166)、IL-4 (T/G -1098, T/C -590, T/C -33)、IL-4Rα(G/A +1902)、IL-6 (G/C-174, G/A nt565)、IL-10 (G/A -1082, C/T -819, C/A-592)、IL-12(C/A -1188)、gIFN (A/T UTR 5644)、TGFβ(C/T codon 10, G/C codon 25)、TNFα(G/A -308, G/A -238)等细胞因子基因多态性进行分型。结果显示, (1)在检测的13种细胞因子中, TGF(G codon 25)等位基因频率为1.00, 未检测到TGF(C codon 25)等位基因; (2)细胞因子等位基因频率大于0.95的有IL-1α(C-889)、IL-1β(C +3962)、IL-4 (T –1098)、IL-6 (G-174)、IL-6(G nt565)、IL-10(A –1082)和TNFa (G -238); 频率低于0.05的有IL-1α(T -889)、IL-1β(T +3962)、IL-4(G –1098)、IL-6 (A-174)、IL-6 (A nt565)、IL-10 (G –1082) 和TNFa (A -238); (3) IL-10高表达单倍型GCC频率为0.05, 低表达单倍型ATA频率为0.735; TGF β高表达单倍型TG频率为0.49, 低表达单倍型CC频率为0; TNF a高表达单倍型AG和AA频率为0.055, 低表达单倍型GG和GA频率为0.945。结果表明, 浙江汉族人群细胞因子基因多态性较为丰富, 具有地区性遗传特征。     

Eco-hydrological effects of landscape pattern change

Scientists and environmental managers alike are increasingly concerned about landscape pattern change and its effect on hydrological and ecological processes. In this paper, research progress is reviewed and key issues of eco-hydrological effects of landscape pattern change are discussed. There are different eco-hydrological effects with landscape pattern change, and most attention is paid to runoff, water quality, and soil loss. Landscape shape and spatial distribution can change precipitation-runoff processes and lead to the change in runoff yield. Water quality is closely connected with the composition and spatial pattern of source and sink landscapes. Soil erosion systems are usually modified by land use structure and landscape pattern, and soil loss will be either reduced or increased with land use change. In addition, the change of landscape pattern also has potential impacts on climate and soil quality. In future studies, more attention should be paid to comprehensive multi-scale and integrated research of landscape pattern and eco-hydrological processes.     

伊河流域景观格局变化及其驱动机制

以伊河流域1987、2000、2008和2013年4期土地覆被数据、同期气象资料及社会经济数据为基础,综合运用景观生态学原理及ArcGIS 10.2、Fragstats 4.2和SPSS 17等工具,从不同时空尺度分析伊河流域景观格局变化及其驱动机制.结果表明: 1987—2013年,研究区景观空间结构发生明显改变,伊河流域的林地、草地、库塘和建设用地面积增加,耕地、河渠面积呈现“减少-增加-减少”的趋势;1987—2008年,耕地主要转换为建设用地,2008—2013年,耕地、林地和草地之间的转移明显;景观空间格局的变化主要集中在海拔550 m以下的河谷平川和丘陵地带,山地景观格局随人类活动影响的加深也开始发生变化.景观格局指数分析表明:耕地与林地的最大斑块指数和聚集度指数最大;1987—2013年,伊河流域的斑块个数持续快速增长,分离度、Shannon均匀度指数和Shannon多样性指数呈“增大-略有减小-增大”的趋势,说明景观格局趋于不稳定,景观异质性增强.社会经济发展与人口增加是耕地、未利用地等景观类型向建设用地转化的主要驱动力;气温上升与蒸散发量增加是流域水域面积变化的直接原因;政策是流域林地、草地等景观结构发生变化的根本原因.     

Species pattern and genetic diversity of Trichoderma in a mid-European,primeval floodplain-forest

We investigated the occurrence and genetic diversity of Trichoderma in the river Danube national park, a primeval, riparian forest area located south-east of Vienna (Austria) which represents one of the last cases of an original European river-floodplain landscape. Forty-six strains were isolated and identified at the species level by analysis of morphological characters, by sequence analysis of their internal transcribed spacer regions 1 and 2 (ITS 1 and 2) of the rDNA cluster and--in some cases--a fragment of the translation elongation factor 1alpha (tef1) gene, and RAPD-analysis. Twenty-one strains were positively identified as T. harzianum, thirteen as T. rossicum, four as T. cerinum, two as T. hamatum, and one each as T. atroviride and T. koningii: four strains yielded two different ITS1 and 2 as well as tef1 sequence types, which were not alignable with any known species. Our studies show that they represent two new taxa of Trichoderma.     

血清细胞因子变化在新生儿感染性肺炎中的诊断价值

研究IL-6、TNF-α和IL-2R在肺部感染性肺炎新生儿中的诊断价值。

收集2018年12月至2020年12月在本院妇产科出生新生儿(胎龄34~42周)资料, 根据肺部超声结果, 将新生儿分为病例组和正常组, 检测脐血中白细胞介素-6(IL-6)、肿瘤坏死因子-α(TNF-α)、白细胞介素-2受体(IL-2R), 独立样本t检验分析差异性, 多元线性回归分析IL-6、TNF-α及IL-2R与出现肺部感染的相关性, ROC曲线分析IL-6、TNF-α及IL-2R的灵敏度, VITEK-60系统鉴定病原菌。

两组一般资料剖宫产率、性别、出生体质量、胎龄等差异均无统计学意义(P > 0.05);与正常组比较, 病例组脐血炎性标志物IL-6、TNF-a、IL-2R水平均升高(P < 0.01);多元线性回归分析IL-6、TNF-a、IL-2R与新生儿出现肺部感染有关(P < 0.05);ROC曲线分析IL-6(> 155.270 pg/mL)的灵敏度为98.5%, 特异性为85.0%, 约登指数max=0.808;TNF-α(> 16.795 pg/mL)的灵敏度为89.6%, 特异性为86.7%, 约登指数max=0.763;IL-2R(> 603.935 U/mL)的灵敏度为70.8%, 特异性为86.7%, 约登指数max=0.575;病例组检出病原菌143株, 包括127例革兰阴性杆菌(肺炎克雷伯菌构成比最高, 为25.87%)和16例革兰阳性杆菌(表皮葡萄球菌构成比最高, 为2.80%)。

IL-6、TNF-α和IL-2R对肺部感染性肺炎具有识别作用, 在鉴别和预测新生儿出现感染性肺炎具有诊断价值。

     

Obesity influences the food consumption and cytokine pattern in ghrelin-treated endotoxemic rats

Obese patients have an increased incidence of systemic infections and higher morbidity and mortality rates than normal weight subjects. Ghrelin is a potent orexigenic signal from the stomach and seems to play a role in the generation and control of immune interactions. To examine a possible benefit of a single ghrelin application on acute endotoxemia, chronic intravenous (i.v.) cannulated lean and diet-induced obese male LEW rats were treated with a bolus injection of either ghrelin (10 nmol/kg) or vehicle, 10 min prior to a challenge with a sublethal bolus of endotoxin (100 microg/kg) or vehicle. Multiple blood samples were taken within a period from 24 h before the experiment up to 24 h after the endotoxin challenge to measure ghrelin and cytokine levels. Additionally, food consumption was recorded and ghrelin expression in fore- and glandular stomach was evaluated immunohistochemically. Despite higher serum ghrelin levels, the food consumption was significantly decreased in obese endotoxemic rats compared to lean littermates after ghrelin treatment. Furthermore we could show an increase of anti-inflammatory IL-10 serum levels after ghrelin treatment of normal weight endotoxemic and an opposite effect in obese animals. As the therapy of disease-associated cachexia and various immunological problems in endotoxemia is still insufficient, peptides such as ghrelin with their modulating abilities for the endocrine and the immune system are of special interest. However, the present study shows that the beneficial effects of ghrelin were attenuated in obese endotoxemic animals. These data further document the necessity to differentiate between normal weight and obese subjects in the attempt to establish ghrelin as a therapeutic target in endotoxemia.     

A change in the genetic code inMycoplasma capricolum

Summary Mycoplasma capricolum was previously found to use UGA instead of UGG as its codon for tryptophan and to contain 75%A+ T in its DNA. The codon change could have been due to mutational pressure to replace C+G by A+T, resulting in the replacement of UGA stop codons by UAA, change of the anticodon in tryptophan tRNA from CCA to UCA, and replacement of UGG tryptophan codons by UGA. None of these changes should have been deleterious.     

Secondary hemophagocytic lymphohistiocytosis versus cytokine release syndrome in severe COVID-19 patients

COVID-19 or SARS-CoV-2 infection can lead to severe acute respiratory distress syndrome/pneumonia with features of cytokine storm reminiscent of secondary hemophagocytic lymphohistiocytosis (HLH), which can be diagnosed by the calculated HScore. Recent reports have suggested favorable responses to the interleukin-1 receptor antagonist, anakinra in patients with COVID-19 associated secondary HLH. In our single institution study, we compared 14 COVID-19 cytokine storm patients with 10 secondary HLH patients seen immediately prior to the pandemic (non-COVID-19), to determine whether diagnostic features of secondary HLH were typically seen in COVID-19 patients presenting with cytokine storm. Although most of our COVID-19 patients did not fulfill diagnostic criteria for HLH, we hypothesize that identification of HLH may relate to the severity or timing of cytokine release. Based on our observations, we would suggest distinguishing between cytokine release syndrome and secondary HLH, reserving the latter term for cases fulfilling diagnostic criteria.Impact statementSevere COVID-19 associated pneumonia and acute respiratory distress syndrome has recently been described with life-threatening features of cytokine storm and loosely referred to as hemophagocytic lymphohistiocytosis (HLH) or macrophage activation syndrome (MAS). Although a recent report indicated favorable responses to the interleukin-1 receptor antagonist, anakinra in eight patients with COVID-19 secondary HLH diagnosed using the HScore calculation, others have suggested that the diagnosis of secondary HLH is uncommon and that the use of the HScore has limited value in guiding immunomodulatory therapy for COVID-19. Here, we provide additional perspective on this important controversy based upon comparisons between 14 COVID-19 cytokine storm patients and 10 secondary HLH patients seen immediately prior to the pandemic. We hypothesize that identification of HLH may relate to the severity or timing of cytokine release and suggest distinguishing between cytokine release syndrome and secondary HLH, reserving the latter term for cases fulfilling diagnostic criteria.