细菌诱析袋表面培养法及其蛋白质产物的检测

本报告的细菌透析袋表面培养法,可使被检菌的浓度比普通培养法高１０倍左右,并避免了培养基中高分子物质混入,以上清原液直接进行ＳＤＳ－ＰＡＧＥ得到了清晰的带谱。对葡萄球菌产生的蛋白质带谱观察显示;不同菌种,菌株间带谱都有各自不同特征,各菌株的带谱重复性良好。本培养法在细菌蛋白质产物分析及临床细菌鉴定中是很在实用价值的。     

利用基因组学和MALDI-TOF MS技术鉴定放线菌纲细菌的核糖体蛋白质标志物

【目的】基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)法基于微生物的特征蛋白指纹图谱鉴定菌种,本研究利用基因组学和MALDI-TOFMS技术鉴定放线菌纲细菌的核糖体蛋白质标志物。【方法】从MALDI-TOF MS图谱数据库选取放线菌纲代表菌种,在基因组数据库检索目标菌种,获取目标菌株或其参比菌株的核糖体蛋白质序列,计算获得分子质量理论值,用于注释目标菌株MALDI-TOFMS指纹图谱中的核糖体蛋白质信号。【结果】从8目,24科,53属,114种,142株放线菌的MALDI-TOFMS图谱中总共注释出31种核糖体蛋白质。各菌株的指纹图谱中核糖体蛋白质信号数量差异显著。各种核糖体蛋白质信号的注释次数差异显著。总共15种核糖体蛋白质在超过半数图谱中得到注释,注释次数最高的是核糖体大亚基蛋白质L36。【结论】本研究找到了放线菌纲细菌MALDI-TOF MS图谱中常见的15种核糖体蛋白质信号,可为通过识别核糖体蛋白质的质谱特征峰鉴定放线菌的方法建立提供依据。     

高产细菌素菌株WJ K84-1的诱变筛选及其对植物病原菌抑菌机理的研究

以发根土壤杆菌K84为供试菌株,对其进行紫外诱变,采用定向竞争选择技术,筛选出高产细菌素的目的菌株WJK84-1,并对根癌农杆菌的抑菌作用及其抑菌机理进行了研究。通过琼脂扩散法和液体培养法测试表明,WJK84-1菌株和其产生的P-2001细菌素均对C58病原菌有明显的抑制作用。蛋白电泳谱带分析示出,细菌素对C58病原菌的作用是抑制蛋白合成,使其蛋白总量表达水平呈下降趋势,尤其是大分子量蛋白含量下降显著,有的蛋白谱带(R1、R4)缺失,且随细菌素浓度的增加,抑制作用更加强烈。扫描电镜观察,细菌素作用后的菌体不同部位出现缢痕,直至缢缩成颗粒状残体而死亡。透射电镜观察进一步证明,C58菌细胞膜被裂解,细胞结构被破坏而致死。樱桃接瘤实验表明,WJK84-1菌株和其产生细菌素均可抑制根瘤发生,抑瘤率达到83．4％左右。     

1株产细菌素乳酸菌的筛选和鉴定

目的 从植物性材料中筛选产细菌素的乳酸菌。方法 琼脂扩散法。结果 所筛选的产细菌素R260菌株经鉴定为植物乳杆菌。排除有机酸、过氧化氢等干扰因素后,发酵液仍有很强的抑菌作用;用胰蛋白酶和胃蛋白酶处理后,发酵液抑菌活性急剧下降,因而确定产生的抑菌物质具有蛋白质性质,是一种细菌素。抑菌谱试验测定表明,此菌株的发酵液不仅抑制革兰阳性菌,而且对部分革兰阴性菌也有抑制作用,因此产生的是一类广谱细菌素。结论筛选到了1株产广谱细菌素的乳酸菌。     

拮抗菌抗菌谱及发酵液拮抗能力测定的新方法

目的:确定测定拮抗细菌枯草芽孢杆菌A的抗菌谱及发酵液拮抗能力的方法。方法:平板对峙法测定抗菌谱,三明治法、管碟法、滤纸片法和双层打孔法测定发酵液的拮抗能力。结果:用点接拮抗细菌单菌落的平板对峙法测得菌株A对玉米小斑病菌等10种病原真菌均有拮抗作用;用双层打孔法测定菌株A发酵液拮抗能力,发现在培养条件为温度32℃,溶氧量为300mL三角瓶培养基装量为30mL,接种量5%,初始pH值7.5时发酵液拮抗能力最强。结论:点接拮抗细菌单菌落的平板对峙法适合用来测定菌株A的抗菌谱,双层打孔法适合用来测定菌株A发酵液的拮抗能力。     

具抑菌活性海洋微生物的筛选

从上海郊区海域采集的海水、海泥样中分离出193株海洋细菌,对其进行抑菌活性菌株的筛选。对分离出的菌株分别利用琼脂块法和管碟法进行初筛和复筛,结果显示有29株海洋细菌具有抑菌活性,占总分离菌株的15%,其中抑菌能力较强的G4抑菌谱较广,同时能抑制革兰氏阳性和阴性指示菌。     

拮抗放线菌Y-71的鉴定及其代谢活性物质的性质

本研究从云南采集的腐质土壤样品中分离筛选到一株拮抗放线菌Y-71,通过形态特征、培养特征、生理生化特征、细胞化学组分和基于16SrRNA基因序列的相似性分析等研究,鉴定菌株Y-71为脱叶链霉菌(Streptomyces exfoliatus)。抗菌谱测定及稳定性研究结果表明,菌株Y-71发酵液抑菌谱较广,对革兰氏阳性细菌和革兰氏阴性细菌都有较好的抑制作用;其抑菌活性物质对温度敏感,在70°C处理后抑菌活性丧失;在pH2-8条件下稳定;不能被蛋白酶降解,可初步判定此活性物质不属于蛋白质或肽类物质。本研究为该菌株今后的应用、抗生素的分离提纯奠定了基础。     

尝试利用R—Q对应因子分析识别分群融合子代

在特定融合组合的子代群体中,以不同姊妹菌株作为观察样本(n=N),以蛋白质电泳全部谱带泳动率作为指标(p=P),则所对应的谱带光密度扫描峰面积作为其观测值(X)(当某菌株缺乏某条带时,其峰面积记为零),利用R-Q对应因子分析程序,解析这个数据矩阵(X_(nxp))。能够在同一标度的因子平面上考察这一特定融合重组事件发生后,姊妹菌株间和各菌株肉蛋白质谱带位置与含量间以及它们相互之间的多重内在联系,从而推断子代群体与亲本的遗传继承关系。并由此来识别和分群姊妹菌株。这种探索具有拓展数值分类能力和指导融合育种实践的意义。     

一株桑树内生拮抗菌的分离、鉴定及发酵条件优化

【目的】利用植物内生拮抗菌防治植物病害是一种有效的生物防治手段。本研究从健康桑树中分离筛选桑椹菌核病拮抗性内生细菌,为桑椹菌核病生物防治提供优良菌种。【方法】釆用组织分离培养法及抑菌圈法分离、筛选桑椹菌核病拮抗性内生细菌;根据菌体形态、培养特征、生理生化特性及基于16S rDNA序列的系统发育分析,对抑菌活性显著且稳定的菌株进行菌种鉴定;进而利用菌丝生长速率法检测活性发酵液的抑菌谱与热稳定性,并通过单因素及正交试验优化该菌株产生抑菌活性物质的发酵条件。【结果】从健康桑树中共分离获得55株内生细菌,其中XP-27菌株对核盘菌PZ-2的抑菌活性稳定且拮抗效果明显;XP-27菌株形态、培养特征、生理生化特性与芽孢杆菌属相符,基于16S rDNA序列的系统发育分析结果显示该菌株与多株甲基营养型芽孢杆菌(Bacillus methylotrophicus)的亲缘关系最近,且处于系统发育树的同一分枝,故将XP-27菌株鉴定为甲基营养型芽孢杆菌,命名为B.methylotrophicusXP-27;抑菌谱与热稳定性实验结果表明XP-27菌株对灰霉菌SWU5、腐霉菌SWU3等10种常见植物病原菌具不同程度的抑制作用,且其发酵滤液热稳定性强;发酵条件优化结果表明该菌株最佳培养基配方与培养条件为:牛肉膏1.00%,淀粉1.50%,K_2HPO_4 0.05%,MgSO_4·7H_2O 0.10%,初始pH值为8.0,培养温度为30°C,接种量为7%,发酵时间为120 h。【结论】筛选获得的桑树内生细菌B. methylotrophicus XP-27对桑椹菌核病病原菌核盘菌PZ-2具有显著拮抗作用,可作为开发桑椹菌核病生防制剂的候选菌株。     

温郁金内生拮抗细菌B-11的分离及其抑菌活性

【背景】植物内生菌广泛分布在自然界中,具有巨大的潜在开发与应用价值。【目的】对温郁金内生细菌进行分离鉴定,并从中筛选出具有生防潜能的菌株。【方法】采用常规组织分离法对温郁金根茎内生细菌进行分离并利用16S rRNA基因序列分析进行初步鉴定;采用平板对峙法以铁皮石斛炭疽病菌(Colletotrichum gloeosporioides)为供试菌株对温郁金内生细菌进行拮抗菌的筛选;通过形态学鉴定、生理生化鉴定以及16S rRNA基因序列分析,确定拮抗菌株B-11的分类地位;以6个不同属的植物病原真菌为供试菌株对拮抗菌株B-11的抑菌谱进行测定,并研究其对病原菌菌丝的影响;利用特异性平板和MALDI-TOF-MS检测技术对拮抗菌株B-11产生的抑菌物质进行检测;采用离体叶片接种法研究拮抗菌株B-11对铁皮石斛炭疽病菌的防治效果。【结果】从温郁金根茎中分离得到25株内生细菌菌株,这些细菌菌株分属于12个属,其中芽孢杆菌属为优势菌属,占分离菌株的28%;通过初筛获得8株对C.gloeosporioides有抑菌活性的菌株,其中菌株B-11的抑菌活性最强,经鉴定该菌为贝莱斯芽孢杆菌(Baclliusvelezensis);抑菌谱测定发现菌株B-11能够对供试的属于不同属的6种植物病原真菌的菌丝生长具有抑制作用,显微观察发现经对峙培养6 d后这6种病原菌的菌丝体出现畸形膨大、分枝增多等现象;特异性平板检测结果表明拮抗菌株B-11能够产生蛋白酶、β-葡聚糖酶和嗜铁素,但不产生几丁质酶;MALDI-TOF-MS检测结果表明拮抗菌株B-11能够产生伊枯草素、丰源素和表面活性素3种脂肽类抗生素,其中伊枯草素的产量最高;离体叶片接种实验表明,拮抗菌B-11的离心去菌发酵液对铁皮石斛炭疽病的防治效率可达64%。【结论】温郁金根茎含有丰富的内生细菌资源,其内生细菌菌株B-11有潜力作为开发抗真菌代谢物和新药物的重要微生物资源。     

鼠李糖乳杆菌PUM1749高盐和胆盐耐受能力与抑菌活性研究

以结肠癌术后患者粪便中分离出的鼠李糖乳杆菌PUM1749作为研究对象,通过检测其耐高盐、耐胆盐能力和抑菌活性,评价其益生特性。

以鼠李糖乳杆菌GG为对照,将其和鼠李糖乳杆菌PUM1749分别培养于含不同浓度NaCl和胆盐的MRS肉汤中,采用滴种法进行活菌计数,采用双层琼脂夹心法结合滴种法检测两株菌对8种指示菌的抑菌效果。

在不同浓度NaCl溶液培养24 h后,2株鼠李糖乳杆菌活菌数均在10⁸ CFU/mL数量级以上。当浓度低于2 g/100 mL时,2株菌活菌数随NaCl浓度增加而减少,之后随着NaCl浓度的提高,PUM1749株活菌数均高于GG株;在不同浓度胆盐肉汤中培养4 h后,2株菌生长均被不同程度抑制,活菌数显著下降,PUM1749株在胆盐浓度为0.1 g/100 mL时生长被完全抑制,但继续提高胆盐浓度后,PUM1749株活菌数反而明显优于GG株;2株菌对8种指示菌均具有较好的抑菌效果,且对革兰阳性菌和革兰阴性菌的抑菌效果无明显差别。

鼠李糖乳杆菌PUM1749在不同高盐和胆盐浓度条件下的耐受能力和抑菌活性均强于或持平鼠李糖乳杆菌GG。鼠李糖乳杆菌PUM1749具有良好的益生特性。

     

高产铁载体棉田土壤细菌SS05的筛选与鉴定

【目的】研究从棉田土壤中筛选得到的高产铁载体细菌产铁载体能力、分类地位和抑菌活性。【方法】通过改良蔗糖-天冬氨酸培养基选择性筛选产铁载体细菌,通过分光光度计法测定铁载体活性,通过混菌法测定产铁载体细菌上清液对棉花枯萎病致病菌尖孢镰刀菌(Fusarium oxysporum)的抑菌效果,采用形态学、生理生化鉴定及16S rDNA序列系统发育分析对高产铁载体菌株进行鉴定。【结果】从棉田土壤中筛选到162株产铁载体细菌,30株产铁载体能力较强的细菌中21株具有较高产铁载体能力,菌株SS05的铁载体活性单位达到98.3%;在低铁条件下,SS05上清液对F.oxysporum具有显著的抑制作用;SS05与莫哈韦芽孢杆菌(Bacillus mojavensis)最为接近。【结论】SS05是高产铁载体菌株,与莫哈韦芽孢杆菌(Bacillus mojavensis)最为接近,在低铁培养条件下其上清液对F.oxysporum具有显著的抑制作用。     

Surface Attachment Induced Production of Antimicrobial Compounds by Marine Epiphytic Bacteria Using Modified Roller Bottle Cultivation

A modified roller bottle culture method elicited the production of antimicrobial compounds from 2 epibiotic marine bacterial strains, EI-34-6 and II-111-5, isolated from the surface of the marine alga Palmaria palmata. These isolates, tentatively identified as Bacillus species, were grown as a biofilm on the surface of nutrient glycerol ferric agar (NGFA) and marine Columbia glycerol agar (MCGA) on the inside of a rolling bottle. The biofilm was shown to be stable, and the cells were difficult to remove from the agar surface. The culture supernatant exhibited a different antibiotic spectrum when the strains were grown using the agar roller bottle method compared with shake flask cultures or nonagar roller bottle cultures. These results suggest that biofilm formation is an important factor in the production of antimicrobial compounds by these 2 strains, and roller bottle cultivation also allowed production of these compounds to be increased. The methodology used here has the potential to allow increased production of useful secondary metabolites such as antibiotics from marine epibiotic bacteria.     

The positions of the sigma-factor genes, whiG and sigF, in the hierarchy controlling the development of spore chains in the aerial hyphae of Streptomyces coelicolor A3(2)

Multiple yop mutant strains of Yersinia pseudotuberculosis not expressing several virulence effector Yop proteins (YopH, M, E, K and YpkA) were engineered. When high-copy-number plasmids carrying the ypkA or the yopE gene with their endogenous promoters were introduced into the engineered strains, the corresponding Yop protein was secreted at high levels in vitro . These multiple yop mutant strains, when harbouring the yopE gene in trans , behaved as the wild-type strain with respect to YopB-dependent translocation of YopE through the HeLa cell plasma membrane. Using these multiple yop mutant strains, it was demonstrated that the YpkA Ser/Thr protein kinase mediates morphological alterations of infected cultured HeLa cells different from those mediated by YopE and YopH. Furthermore, YpkA is shown to be translocated by a YopB-dependent translocation mechanism from surface-located bacteria and subsequently targeted to the inner surface of the target-cell plasma membrane. The pattern of YpkA localization after infection suggests that this Yop effector is involved in interference with signal transduction.     

番茄内生菌分离及其ERIC—PCR指纹图谱分析

介绍了一种分离植物内生菌和研究其多样性的方法。用无菌水、化学试剂、紫外线和机械去表皮4种方法对番茄植株进行处理,然后分别用牛肉膏蛋白胨、高氏一号和PDA(加链霉素抑制细菌生长)3种培养基分离内生菌。确定了最适宜的去除非内生菌的方法。经分离、纯化得到148株大小、形态、颜色各异的内生菌分离物。对其中43株进行ERIC—PCR扩增,32株有扩增条带的菌株可分为28种。把纯化的菌株分别与番茄早疫病菌进行平板对峙培养。筛选出抑菌效果较好的3株菌。     

不同碳源下毕赤酵母GS115蛋白组学分析

毕赤酵母(Pichia pastoris)表达系统是目前最为成功的外源蛋白表达系统之一。该表达系统不存在原核表达系统的内毒素难以除去的问题,也不存在哺乳动物细胞表达系统的病毒和支原体污染问题;并能够对目的蛋白进行类似于高等真核生物的信号肽剪切、二硫键形成、糖基化等蛋白翻译后加工。但是不论是胞内表达或是分泌表达,大多数外源蛋白均面临着被降解的问题,这也是影响目的蛋白表达量的一个重要因素,同时还增加了纯化目的蛋白的难度。目的:研究毕赤酵母GS115在不同碳源培养过程中胞内外蛋白质组学的差异,指导毕赤酵母表达系统的优化。方法:利用LC-ESI-MS/MS方法分析了不同碳源的四种培养基中毕赤酵母GS115的胞内和胞外蛋白种类,利用Griffin等的计算方法计算各个蛋白的含量。结果:利用LC-ESI-MS/MS结合Griffin等的归一化非标定量法SI_N得到GS115胞内胞外详尽的蛋白质种类及准确百分比含量。结论:分析不同培养基之间蛋白质组成的差异,从而为以后构建新的毕赤酵母表达体系,为外源蛋白表达系统的优化提供一定的指导意义。     

Comparison of differential plating media and two chromatography techniques for the detection of histamine production in bacteria

The bacterial enzyme histidine decarboxylase (Hdc) catalyses the conversion of histidine into histamine. This amine is essential for the biosynthesis of iron chelators (siderophores) and is an important cause of food poisoning after consumption of fish contaminated with histamine-producing bacteria. In this work we compared different methods for detecting histamine secreted by different bacterial strains. The presence of histamine in the culture supernatant of Vibrio anguillarum, which produces Hdc and secretes the histamine-containing siderophore anguibactin, was detected by thin-layer chromatography. Similar results were obtained using the culture supernatant of the Acinetobacter baumannii 19606 prototype strain that secretes the histamine-containing siderophore acinetobactin. Conversely, histamine was not detected in the culture supernatant of an isogenic V. anguillarum Hdc mutant and the A. baumannii 8399 strain that secretes a catechol siderophore different from anguibactin and acinetobactin. These results were confirmed by capillary gas chromatography/mass spectrometry. However, all these strains tested positive for histamine secretion when cultured on differential plating media containing histidine and a pH indicator, which were specifically designed for the detection of histamine-producing bacteria. The pH increase of the medium surrounding the bacterial colonies was however drastically reduced when the histidine-containing medium was supplemented with peptone, beef extract, and glucose. The histidine-containing culture supernatants of the A. baumannii and V. anguillarum strains showed an increase of about two units of pH, turned purple upon the addition of cresol red, and contained high amounts of ammonia. Escherichia coli strains, which are Hdc negative and do not use histidine as a carbon, nitrogen, and energy source, gave negative results with the differential solid medium and produced only moderate amounts of ammonia when cultured in the presence of excess histidine. This study demonstrates that, although more laborious and requiring some expensive equipment, thin-layer and gas chromatography/mass spectrometry are more accurate than differential media for detecting bacterial histamine secretion. The results obtained with these analytical methods are not affected by byproducts such as ammonia, which are generated during the degradation of histidine and produce false positive results with the differential plating media.     

Molecular and phenotypic characterisation of Bacillus thuringiensis isolated during epizootics in Cydia pomonella L

Twelve Bacillus thuringiensis strains were isolated from intestinal tracts of Cydia pomonella larvae during epizootics in different laboratory insect culture lines. Phenotypic and genetic similarity of these isolates, together with two cultured from Leucoma salicis larvae and 14 reference B. thuringiensis strains were determined. The epizootic bacteria did not form a single group based on numerical analysis of biochemical properties. Simple RAPD method with only one primer does not allow estimating the genetic similarity of B. thuringiensis strains. We propose a novel strategy based on combining several DNA patterns obtained by RAPD technique with different primers for B. thuringiensis typing. Majority of infections in the C. pomonella culture lines were caused by bacteria with different genotypes. However, two isolates cultured from infected insects at different time (one strain was isolated in 1990 and the other in 1992) had identical DNA fingerprint that suggested a possibility of these bacteria to survive in the laboratory and to cause infections in different years. The results of SDS-PAGE of whole-cell proteins revealed a possibility to apply protein profile analysis in epidemiological investigations of infections caused by B. thuringiensis. Strains with identical DNA patterns had very similar whole-cell protein profiles.     

双歧杆菌粘附大肠癌细胞相关因素探讨

本文以青春双歧杆菌ＤＭ９２２７粘附大肠癌细胞ｃｌ－１８７为实验模型,探讨粘附的相关因素。结果表明：粘附需要一定的菌浓度（＞１０６ＣＦＵ／ｍｌ）,一定的温度（３７℃）及一定的时间（＞１０ｈ）,且偏酸更有利于粘附。破坏菌体表面的糖结构使粘附上升,而破坏蛋白结构则使粘附下降。