Structure of an archaeal-type phosphoenolpyruvate carboxylase sensitive to inhibition by aspartate

The crystal structure of an archaeal‐type phosphoenolpyruvate carboxylase from Clostridium perfringens has been determined based on X‐ray data extending to 3 Å. The asymmetric unit of the structure includes two tetramers (each a dimer‐of‐dimers) of the enzyme. The precipitant, malonate, employed for the crystallization is itself a weak inhibitor of phosphoenolpyruvate carboxylase and a malonate molecule is seen in the active‐site in the crystal structure. The allosteric binding sites for aspartate (an inhibitor) and glucose‐6‐phosphate (an activator) observed in the Escherichia coli and Zea mays phosphoenolpyruvate carboxylase structures, respectively, are not conserved in the C. perfringens structure. Aspartate inhibits the C. perfringens enzyme competitively with respect to the substrate, Mg^++. phosphoenolpyruvate. A mechanism for inhibition is proposed based on the structure and sequence comparisons with other archaeal‐type phosphoenolpyruvate carboxylases with differing sensitivity to inhibition by aspartate. Proteins 2011; © 2011 Wiley‐Liss, Inc.     

Interactive effects of soil fertility and herbivory on Brassica nigra

Soil nutrient availability may affect both the amount of damage that plants receive from herbivores and the ability of plants to recover from herbivory, but these two factors are rarely considered together. In the experiment reported here, I examined how soil fertility influenced both the degree of defoliation and compensation for herbivory for Brassica nigra plants damaged by Pieris rapae caterpillars. Realistic levels of defoliation were obtained by placing caterpillars on potted host plants early in the life cycle and allowing them to feed until just before pupation on the designated plant. Percent defoliation was more than twice as great at low soil fertility compared to high (48.2% and 21.0%, respectively), even though plants grown at high soil fertility lost a greater absolute amount of leaf area (38.2 cm² and 22.1 cm², respectively). At both low and high soil fertility, total seed number and mean mass per seed of damaged plants were equivalent to those of undamaged plants. Thus soil fertility did not influence plant compensation in terms of maternal fitness. However, the pathways used to achieve compensation in seed production were different at low and high soil fertility. At low soil fertility, relative leaf growth rates (area added per inital area per day) of damaged plants were drastically reduced over the second week of caterpillar feeding. Damaged plants recovered the leaf area lost to herbivory in the two weeks following insect removal by increasing leaf relative growth rates above the levels seen for undamaged plants, but the replacement of leaf tissue lost to herbivory came at the expense of stem biomass. At high soil fertility, relative leaf growth rates of damaged plants were similar to those of undamaged plants both over the second week of caterpillar feeding and following caterpillar removal, and stem biomass was not affected by herbivory. These results suggest that higher levels of soil nutrients increased the ability of plants to stay ahead of their herbivores as they were being eaten. Because damaged plants at high soil fertility were able to maintain leaf growth rates to a greater extent than damaged plants at low soil fertility, they did not fall as far behind undamaged plants over the period of insect feeding and did not have as much catching up to do after feeding ended to compensate for herbivory.     

Relationship between soil properties and incidence of pine wilt disease at stand level

This study was conducted to evaluate and compare soil properties between pine stands either damaged or undamaged by pine wilt disease in Jinju and Sacheon Cities, which are areas in Korea severely affected by the disease. Soil physical and chemical properties were generally similar between damaged and undamaged pine stands. There was no significant difference in soil factors related to soil nutrient fertility between damaged and undamaged pine stands, although the incidence of pine wilt disease was affected by soil clay content, which was significantly (P < 0.05) higher in the damaged (24.8%) than in the undamaged (20.1%) pine stands. However, this relationship should be treated with caution because small scale topographical variation may simply reflect the incidence of pine wilt disease. The results suggest that incidence of pine wilt disease was not influenced by soil nutrient properties at a small stand scale.     

Effect O6‐guanine alkylation on DNA flexibility studied by comparative molecular dynamics simulations

Alkylation of guanine at the O6 atom is a highly mutagenic DNA lesion because it alters the coding specificity of the base causing G:C to A:T transversion mutations. Specific DNA repair enzymes, e.g. O⁶‐alkylguanin‐DNA‐Transferases (AGT), recognize and repair such damage after looping out the damaged base to transfer it into the enzyme active site. The exact mechanism how the repair enzyme identifies a damaged site within a large surplus of undamaged DNA is not fully understood. The O⁶‐alkylation of guanine may change the deformability of DNA which may facilitate the initial binding of a repair enzyme at the damaged site. In order to characterize the effect of O⁶‐methyl‐guanine (O⁶‐MeG) containing base pairs on the DNA deformability extensive comparative molecular dynamics (MD) simulations on duplex DNA with central G:C, O⁶‐MeG:C or O⁶‐MeG:T base pairs were performed. The simulations indicate significant differences in the helical deformability due to the presence of O⁶‐MeG compared to regular undamaged DNA. This includes enhanced base pair opening, shear and stagger motions and alterations in the backbone fine structure caused in part by transient rupture of the base pairing at the damaged site and transient insertion of water molecules. It is likely that the increased opening motions of O⁶‐MeG:C or O⁶‐MeG:T base pairs play a decisive role for the induced fit recognition or for the looping out of the damaged base by repair enzymes. © 2014 Wiley Periodicals, Inc. Biopolymers 103: 23–32, 2015.     

Similar attractiveness of maize volatiles induced by Helicoverpa armigera and Pseudaletia separata to the generalist parasitoid Campoletis chlorideae

Campoletis chlorideae Uchida (Hymenoptera: Ichneumonidae), a major larval endoparasitoid of Helicoverpa armigera (Hübner) (Lepidoptera: Noctuidae), also attacks many other noctuid caterpillars. We investigated the attractiveness of H. armigera‐ and Pseudaletia separata (Lepidoptera: Noctuidae)‐infested maize [Zea mays L. (Poaceae)] plants to C. chlorideae, and analyzed the volatiles emitted from infested plants and undamaged plants. Considering the reported specific induction of plant volatiles by elicitors in the caterpillar regurgitant, we also tested the response of the parasitoid to mechanically damaged plants treated with caterpillar regurgitant or water and measured the volatiles released by these plants. In wind‐tunnel bioassays, C. chlorideae was strongly attracted to herbivore‐induced maize volatiles. Mechanically damaged plants, whether they were treated with caterpillar regurgitant or water, were more attractive to the parasitoid than undamaged plants. The parasitoid did not distinguish between maize seedlings infested by the two noctuid insects, nor did they show a difference in attraction to mechanically damaged plants treated with caterpillar regurgitant or water. Coupled gas chromatography–mass spectrometer (GC‐MS) analysis revealed that 15 compounds were commonly emitted by herbivore‐infested and mechanically damaged maize plants, whereas only two compounds were released in minor amounts from undamaged plants. Infestation by H. armigera specifically induced four terpenoids, β‐pinene, β‐myrcene, D‐limonene, and (E)‐nerolidol, which were not induced by infestation of P. separata and mechanical damage, plus caterpillar regurgitant or water. Two compounds, geranyl acetate and β‐sesquiphellandrene, were also induced by the infestation of H. armigera, but not by the infestation of P. separata. All treated maize plants released volatiles in significantly larger total amounts than did undamaged plants. Maize plants infested by H. armigera emitted greater amounts of volatiles than plants infested by P. separata. The treatment with caterpillar regurgitant resulted in larger amounts of volatile emission than the treatment with water did in mechanically damaged plants. The amounts of emissions of individual compounds were also different between differently treated plants.     

Coral recruitment and recovery after the 2004 Tsunami around the Phi Phi Islands (Krabi Province) and Phuket, Andaman Sea, Thailand

The 2004 tsunami left a discontinuous pattern of destruction in the reefs along Andaman Sea coast of Thailand. Here, a comparative assessment of coral recruitment was carried out to assess differences in recovery between damaged and undamaged sites in near-shore fringing reefs 1 and 3 years after the tsunami. Settlement plates showed high frequencies of coral spat after 4 months (<17 spat tile⁻¹) in both, damaged and undamaged locations. Field surveys carried out 3 years after the tsunami on natural substrate confirmed that tsunami damage did not suppress recruitment in damaged sites relative to no impacted controls. New and stable settlement space along with unabated larval supply supported post-tsunami recruit densities up to 7.2 m⁻² year⁻¹. Mean recruit densities were found at the level of post-storm situations with rapid recovery success, suggesting that the duration of disturbance, degree of sorting and, hence, stability of coral rubble is a key determinant of recruitment success. Low regeneration success of some species e.g. branching acroporids and rebounding tourism industry at sites like Patong and partly around the Phi Phi Islands (dense carpets of filamentous algae) led to the assumption of selectivity and eventually to an alternation of the coral community even though live coral cover might be recovered soon.     

Response of Neoseiulus fallacis Garmen and Galendromus occidentalis Nesbitt (Acari: Phytoseiidae) to Tetranychus urticae Koch (Acari: Tetranychidae)-Damaged Hop Humulus lupulus (L.) (Urticales: Cannabaceae)

Abstract 1 The response of Neoseiulus fallacis Garmen and Galendromus occidentalis (Acari: Phytoseiidae) to Tetranychus urticae Koch (Acari: Tetranychidae)‐damaged and undamaged hop, Humulus lupulus (L.), plants was tested using a Y‐tube olfactometer. 2 Neoseiulus fallacis but not G. occidentalis was attracted to volatiles from T. urticae‐damaged hop plants when paired with undamaged plants. 3 The response of N. fallacis to these volatiles was stronger for plants severed at the soil surface than for intact plants. 4 There was no difference in the response of N. fallacis to severed or intact hop plants that had no spider mite damage, indicating that artificial wounding by severing alone does not elicit the production of attractive volatiles detectable to N. fallacis. These results are consistent with the existence of cross‐talk between signalling pathways initiated by feeding damage and artificial wounding that result in elevated levels of predator‐attracting volatiles.     

Herbivory alters resource allocation and compensation in the invasive tree Melaleuca quinquenervia

Abstract. 1. Plants may compensate for the effects of herbivory, especially under favourable growing conditions, limited competition, and minimal top‐down regulation. These conditions characterise many disturbed wetlands dominated by introduced plants, implying that exotic, invasive weeds in these systems should exhibit strong compensatory responses. 2. The Australian native Melaleuca quinquenervia is highly invasive in the Florida Everglades, U.S.A., where it experiences limited competition or herbivory from native species, making it a likely candidate for compensation. The introduced biological control agent Oxyops vitiosa feeds exclusively on the seasonal flushes of developing foliage at branch apices, which represents ≈15% of the total foliar biomass. 3. The hypothesis that M. quinquenervia compensates for folivory by O. vitiosa was tested in a series of field‐based experiments. Trees experiencing folivory over four consecutive years maintained similar levels of foliar biomass after attack yet possessed twice the number of leaf‐bearing terminal stems as undamaged trees. The biomass of these stems was similar among attacked and unattacked trees, indicating that herbivore‐damaged trees produce greater quantities of smaller terminal branches. However, undamaged trees were 36 times more likely to reproduce than herbivore‐damaged trees. 4. In a separate herbivore exclusion study, a single bout of herbivory on previously undamaged M. quinquenervia trees caused an 80% reduction in reproductive structures the following season. Herbivore‐damaged trees also possessed 54% fewer fruits than undamaged trees. An increase in the herbivory frequency (two bouts per year) or magnitude (100% simulated herbivory) did not result in a further reduction in fitness. 5. It has been concluded that M. quinquenervia partially compensates for herbivory by producing new stems and replacing foliage, but this compensation results in a substantial reduction in reproduction.     

Volatile organic compounds released by maize following herbivory or insect extract application and communication between plants

To protect themselves from herbivory, plants have evolved an arsenal of physical and chemical defences and release a variety of volatile organic compounds (VOCs). By releasing these VOCs, a signalling plant can both reduce herbivory, sometimes by more than 90%, and also warn neighbouring plants about an attack. The aim of this study was to assess the influence of herbivory and insect extract application on VOC release by damaged/treated and nearby undamaged/untreated maize plants. We confirmed that European corn borer (Ostrinia nubilalis) larvae attack or larvae extract application induced maize VOC release. Greater amounts of (Z)‐3‐hexenal, (E)‐2‐hexenal, (Z)‐3‐hexen‐1‐ol, (E)‐2‐hexen‐1‐ol, β‐myrcene, (Z)‐3‐hexen‐1‐yl acetate, 1‐hexyl acetate, (Z)‐ocimene, linalool, benzyl acetate, methyl salicylate, indole, methyl anthranilate, geranyl acetate, β‐caryophyllene, (E)‐β‐farnesene and (Z)‐3‐hexenal, (Z)‐3‐hexen‐1‐ol, (Z)‐3‐hexen‐1‐yl acetate, (Z)‐ocimene, linalool, indole, methyl anthranilate, geranyl acetate, β‐caryophyllene and (E)‐β‐farnesene were released as a result of biotic stress after insect attack or insect extract application. The amounts of each VOC released were qualitatively and quantitatively distinct and dependent on time after biotic stress exposure. However, for all biotic stresses, significantly lower VOC induction was measured when leaves were damaged/treated for three days, as compared to seven days. Our work also demonstrated that undamaged/untreated neighbouring plants also release significant amounts of VOCs. This suggests that VOC emission by a damaged/treated plant stimulates VOC induction in nearby undamaged/untreated plants. However, the concentrations of all VOCs released by neighbouring undamaged/untreated maize plants were lower than those from damaged/treated plants and were negatively correlated with distance from a damaged/treated plant. Still, significant VOC induction occurred in undamaged/untreated plants even at 3 m distance from a damaged/infected plant. Our work suggests that maize plant protective defence responses (VOC emission) can be induced via application of European corn borer extracts.     

The social wasp Polybia fastidiosuscula Saussure (Hymenoptera: Vespidae) uses herbivore‐induced maize plant volatiles to locate its prey

Social wasps in the Polybia genus are important for use as pest‐control agents in agricultural systems. The objective of this study was to investigate the behavioural responses of Polybia fastidiosuscula Saussure (Hymenoptera: Vespidae) to volatiles from maize, both constitutive volatiles and those induced by the herbivory of Spodoptera frugiperda (JE Smith) (Lepidoptera: Noctuidae). To assess the behavioural response of P. fastidiosuscula to S. frugiperda larvae, undamaged plants, S. frugiperda‐damaged plants, mechanically damaged plants, mechanically damaged plants plus regurgitant from larvae and extracts from various treatments, bioassays were conducted in a Y‐olfactometer. In addition, the volatiles from plants subjected to different treatments were collected via aeration, and they were quantified and identified. The wasps showed a greater preference for plants with damage induced either by larval feeding or by being mechanically damaged plus regurgitant than for undamaged plants or either larvae alone or mechanically damaged plants. Wasps were more attracted to extracts from plants + S. frugiperda larvae and to an extract from mechanically damaged plants + the regurgitant of larvae compared to hexane. The primary compounds induced by herbivory for 5–6 h after the beginning of the damage or regurgitant treatment were identified as α‐pinene, β‐myrcene, (Z)‐3‐hexenyl acetate, limonene, (E)‐ocimene, linalool, DMNT, (E)‐β‐farnesene, TMTT and indole. The results presented here show that the social wasp P. fastidiosuscula uses herbivore‐induced plant volatiles from maize to locate its prey.     

Carbon sequestration in soil in a semi‐natural Miscanthus sinensis grassland and Cryptomeria japonica forest plantation in Aso,Kumamoto, Japan

Although Miscanthus sinensis grasslands (Misc‐GL) and Cryptomeria japonica forest plantations (Cryp‐FP) are proposed bioenergy feedstock systems, their relative capacity to sequester C may be an important factor in determining their potential for sustainable bioenergy production. Therefore, our objective was to quantify changes in soil C sequestration 47 years after a Misc‐GL was converted to a Cryp‐FP. The study was conducted on adjacent Misc‐GL and Cryp‐FP located on Mt. Aso, Kumamoto, Japan. After Cryp‐FP establishment, only the Misc‐GL continued to be managed by annual burning every March. Mass C and N, δ¹³C, and δ¹⁵N at 0–30 cm depth were measured in 5 cm increments. Carbon and N concentrations, C:N ratio, δ¹³C, and δ¹⁵N were measured in litter and/or ash, and rhizomes or roots. Although C input in Misc‐GL by M. sinensis was approximately 36% of that in Cryp‐FP by C. japonica, mean annual soil C sequestration in Misc‐GL (503 kg C ha^?1 yr^?1) was higher than that in Cryp‐FP (284 kg C ha^?1 yr^?1). This was likely the result of larger C input from aboveground litter to soil, C‐quality (C:N ratio and lignin concentration in aboveground litter) and possibly more recalcitrant C (charcoal) inputs by annual burning. The difference in soil δ¹⁵N between sites indicated that organic C with N had greater cycling between heterotrophic microbes and soil and produces more recalcitrant humus in Misc‐GL than in Cryp‐FP. Our data indicate that in terms of soil C sequestration, maintenance of Misc‐GL may be more advantageous than conversion to Cryp‐FP in Aso, Japan.     

Interference among cotton neighbours after differential reproductive damage

In indeterminate plant species, the rate of vegetative growth usually declines during the stage of active reproductive growth. Fruit shedding, as induced by insect herbivores, could counteract this decline. Due to the relative increase in vegetative growth, plants that have suffered reproductive damage could be better able to intercept light and acquire soil resources than undamaged plants. If so, plants with damaged neighbours might grow less than their counterparts with smaller, undamaged neighbours. This hypothesis was tested in high- and low-density cotton crops subjected to three treatments: (i) undamaged controls; (ii) uniformly damaged, in which all plants were damaged; (iii) non-uniformly damaged, in which every second plant was damaged. Damaged plants had their flowerbuds and young fruits manually removed at 85 days after sowing to simulate shedding as induced by Helicoverpa spp. (Lepidoptera) and mirid bugs (Hemiptera). As expected, damaged plants had greater leaf area and more vegetative dry matter than undamaged ones. This was most pronounced at high plant density. Neighbour status did not affect vegetative growth but it had a substantial, asymmetric effect on the reproductive growth of target plants. Damaged targets recovered to the level of undamaged controls in terms of total fruit number but had a large reduction in the mass of mature fruit due to the limited time available for recovery. The effect of neighbour status, if any, on the production of mature fruit in damaged targets was overridden by the limit imposed to recovery by the duration of the growing season. In contrast, neighbour status affected the production of mature fruit of undamaged targets: undamaged targets with damaged neighbours had 34% (low density) and 56% (high density) less mature fruit mass than their counterparts with undamaged neighbours. This was because (i) reproductive allocation and (ii) the proportion of total fruit that reached maturity in target plants declined with increasing neighbour interference. Most studies dealing with changes in competitive relationships among plants subjected to differential herbivory have shown how undamaged plants may benefit from herbivores that feed on their neighbours. This study shows that differential reproductive damage can cause the opposite effect, as undamaged plants may have a significant reduction in productivity due to the influence of neighbours whose vegetative growth was stimulated by the loss of reproductive organs. Received: 2 June 1996 / Accepted: 8 September 1996     

Hylobius abietis L. feeding on the novel host Pinus brutia Ten. increases emission of volatile organic compounds

Plants respond to feeding by herbivorous insects by producing volatile organic chemicals, which mediate interactions between herbivores and plants. Yet, few studies investigated whether such plant responses to herbivory differ between historical host and novel plants. Here, we investigated whether herbivory by the pine weevil Hylobius abietis causes a release of volatile organic chemicals from a novel tree Pinus brutia and compared the relative amounts of volatiles released from herbivore's historical hosts and P. brutia. We collected volatiles emitted from P. brutia seedlings that were either subjected to feeding by H. abietis or no feeding. Our results indicated that feeding increased emission of volatile compounds, composed of monoterpenes and sesquiterpenes, and that the emission was several fold higher in the damaged seedlings than in undamaged seedlings. In particular, emission of monoterpenes and sesquiterpenes increased by 4.4‐and 10‐fold in the damaged plants, respectively. Strikingly, individual monoterpenes and sesquiterpenes showed much greater dissimilarity between damaged and undamaged seedlings. Furthermore, several minor monoterpenes showed negative relationships with the weevil gnawed area. We discussed these results with the results of previous studies focused on historical host plants of H. abietis and hypothesized the ecological relevance and importance of our results pertaining relevance to the plant–herbivory interactions.     

Behavioural responses of the seven‐spot ladybird Coccinella septempunctata to plant headspace chemicals collected from four crop Brassicas and Arabidopsis thaliana,infested with Myzus persicae

1 Insects using olfactory stimuli to forage for prey/hosts are proposed to encounter a ‘reliability–detectability problem’, where the usability of a stimulus depends on its reliability as an indicator of herbivore presence and its detectability. 2 We investigated this theory using the responses of female seven‐spot ladybirds Coccinella septempunctata (Coleoptera: Coccinellidae) to plant headspace chemicals collected from the peach‐potato aphid Myzus persicae and four commercially available Brassica cultivars; Brassica rapa L. cultivar ‘turnip purple top’, Brassica juncea L. cultivar ‘red giant mustard’, Brassica napus L. cultivar ‘Apex’, Brassica napus L. cultivar ‘Courage’ and Arabidopsis thaliana. For each cultivar/species, responses to plants that were undamaged, previously infested by M. persicae and infested with M. persicae, were investigated using dual‐choice Petri dish bioassays and circular arenas. 3 There was no evidence that ladybirds responded to headspace chemicals from aphids alone. Ladybirds significantly preferred headspace chemicals from B. napus cv. Apex that were undamaged compared with those from plants infested with aphids. For the other four species/cultivars, there was a consistent trend of the predators being recorded more often in the half of the Petri dish containing plant headspace chemicals from previously damaged and infested plants compared with those from undamaged ones. Furthermore, the mean distance ladybirds walked to reach aphid‐infested A. thaliana was significantly shorter than to reach undamaged plants. These results suggest that aphid‐induced plant chemicals could act as an arrestment or possibly an attractant stimulus to C. septempunctata. However, it is also possible that C. septempunctata could have been responding to aphid products, such as honeydew, transferred to the previously damaged and infested plants. 4 The results provide evidence to support the ‘reliability–detectability’ theory and suggest that the effectiveness of C. septempunctata as a natural enemy of aphids may be strongly affected by which species and cultivar of Brassica are being grown.     

Reliability of mCP method for identification of Clostridium perfringens from faecal polluted aquatic environments

Aims: The purpose of the work was to evaluate the mCP method to correctly identify and enumerate Clostridium perfringens that are present in surface waters impacted by a mixture of faecal pollution sources. Methods: Clostridium perfringens were enumerated and isolated from sewage influent, surface water and suspended sediments using the mCP method. Molecular characterization of isolates was performed using species‐specific PCR, along with full‐length sequencing of the 16S rRNA gene for a subset of isolates. Results: The environmental isolates were presumptively identified as C. perfringens based on utilization of sucrose, inability to ferment cellobiose and a positive action for acid phosphatase activity. All isolates (n = 126) were classified as C. perfringens based on positive results with species‐specific PCR with a subset confirmed as C. perfringens based on the 16S rRNA gene identity. Conclusions: The molecular results indicated all of the presumptive positive isolates were C. perfringens regardless of the source, e.g. sewage influent or environmental water samples. Sequencing revealed that C. perfringens obtained from sewage and the aquatic environment were nearly identical (c. 99·5% similarity). Significance and Impact of the Study: From this study we conclude that the mCP method is a robust approach to enumerate and isolate C. perfringens from aquatic environments that receive diverse sources of faecal pollution.     

Topographic and climatic controls on soil respiration in six temperate mixed-hardwood forest slopes, Korea

To better understand the effects of local topography and climate on soil respiration, we conducted field measurements and soil incubation experiments to investigate various factors influencing spatial and temporal variations in soil respiration for six mixed‐hardwood forest slopes in the midst of the Korean Peninsula. Soil respiration and soil water content (SWC) were significantly greater (P=0.09 and 0.003, respectively) on north‐facing slopes compared to south‐facing slopes, while soil temperature was not significantly different between slopes (P>0.5). At all sites, soil temperature was the primary factor driving temporal variations in soil respiration (r²=0.84–0.96) followed by SWC, which accounted for 30% of soil respiration spatial and temporal variability. Results from both field measurements and incubation experiments indicate that variations in soil respiration due to aspect can be explained by a convex‐shaped function relating SWC to normalized soil respiration rates. Annual soil respiration estimates (1070–1246 g C m^?2 yr^?1) were not closely related to mean annual air temperatures among sites from different climate regimes. When soils from each site were incubated at similar temperatures in a laboratory, respiration rates for mineral soils from wetter and cooler sites were significantly higher than those for the drier and warmer sites (n=4, P<0.01). Our results indicate that the application of standard temperature‐based Q₁₀ models to estimate soil respiration rates for larger geographic areas covering different aspects or climatic regimes are not adequate unless other factors, such as SWC and total soil nitrogen, are considered in addition to soil temperature.     

Adhesive Property of <Emphasis Type="Italic">Bifidobacterium lactis</Emphasis> LKM512 and Predominant Bacteria of Intestinal Microflora to Human Intestinal Mucin

The adhesive property to the intestinal mucin of Bifidobacterium lactis LKM512, B. longum, B. breve, B. bifidum, B. adolescentis, B. infantis, Bacteroides vulgatus, Bacteroides distasonis, Eubacterium aerofaciens, Clostridium perfringens, Escherichia coli, and Lactobacillus acidophilus were examined. Adhesive rate of LKM512 to the mucin was significantly (p < 0.05, 0.01, or 0.001) stronger than the other strains from 2 to 100 time. Though the adhesive property of many strains was almost same to the mucin of 20-year-old and 50-year-old generations, in case of 4-month-old was different. Adhesive inhibitory effect of C. perfringens to the mucin by LKM512 was examined. Under the condition that LKM512 was 10⁸/ml and that C. perfringens was 10⁶/ml, adhesion of C. perfringens to the mucin was inhibited at 99.6%, when LKM512 adhered in advance. There was the strong inhibition of adhesion at 74.0%, when C. perfringens adhered to mucin in advance. Thus, LKM512 can inhibit the adhesion of harmful bacteria to the intestinal mucin, the possibility of using as a probiotic strain has to be verified.     

Behavior of the tachinid parasitoid <Emphasis Type="Italic">Exorista japonica</Emphasis> (Diptera: Tachinidae) on herbivore-infested plants

Odors from corn plants infested with the larvae of the noctuid herbivore Mythimna separata (Walker) attract tachinid fly, Exorista japonica Townsend, females; and odors from corn plants artificially damaged also attract this fly. We investigated the responses of flies to herbivore-infested, artificially damaged, and undamaged plants before and after arrival at the target plants to measure timing of the behavioral sequence. The behavior of the flies for 10 min after takeoff from a release point was observed in a wind-tunnel bioassay. The percentage of flies attracted to the plants was higher in infested and artificially damaged plants than in undamaged plants. Latency before takeoff was longer in undamaged plants, and time from takeoff to arrival at the plant was also longer in undamaged plants. Moreover, flies stayed longer on infested and artificially damaged plants. Flies walked longer on infested plants than on artificially damaged and undamaged plants. In this paper, we summarize the behavioral data and discuss the host-searching behavior of E. japonica females.     

qPCR quantification and genetic characterization of Clostridium perfringens populations in biosolids composted for 2 years

Aim: The ability of Clostridium perfringens to survive for a long time in the environment makes it a suitable indicator of faecal pollution, but its use as a routine indicator organism in biosolids and composted biosolids has not yet been adopted. This study was performed to improve our understanding of C. perfringens persistence in composted biosolids by monitoring its presence and studying its genetic diversity. Methods and Results: A culture‐independent TaqMan qPCR assay targeting the cpn60 gene was adapted to enumerate C. perfringens in composted biosolid samples varying in age from 1 to 24 months. The pathogen was detected in all compost samples under study, but no correlation between composting time and number of cpn60 copies was observed. Rep‐PCR detected 14 different C. perfringens genotypes, all belonging to toxinotype A, which is the most common biotype found in human and animal gastrointestinal tracts. Conclusions: Composting did not significantly decrease the number of C. perfringens cells. High genetic diversity of C. perfringens isolates present in composted biosolids is reported for the first time. Significance and Impact of Study: This study evaluated tools for surveillance of composting processes, source tracking and risk assessment of composted biosolids.     

Field study on planted forest structures and their role in protecting communities against tsunamis: experiences along the coast of the Biobío Region,Chile

A field study using satellite images was carried out to analyze the effect of coastal vegetation in mitigating the impact of a catastrophic tsunami on coastal villages in the Biobío Region, Chile, in February 2010. Two types of stand, Pinus radiata D. Don forests and Cupressus macrocarpa Hartw. shelterbelts, appear to have protected coastal areas behind them from the direct impact of the tsunami. The impacts of the horizontal and vertical structures of these coastal forests on the drag forces were analyzed by observing the characteristics of Pinus radiata forests and Cupressus macrocarpa shelterbelts. The stands absorbed the impact of the tsunami without incurring broken stems or uprooted trees due to their diverse horizontal structure, as they contained short trees with various diameters. However, small areas of the stands were damaged by salinity after the tsunami. For this tsunami, which was less than 3 m high, the horizontal and vertical structures of the P. radiata and C. macrocarpa stands provided effective protection for coastal villages since they reduced the velocity and height of the tsunami. A shelterbelt consisting of three rows of C. macrocarpa in front of the tsunami and a P. radiata forest with a density of 11 trees/100 m² and a width of >50 m immediately behind the shelterbelt are suggested as a means of protecting communities along the coastline of the Biobío Region against tsunamis.