The formation of migratory ripples in a mixed species bacterial biofilm growing in turbulent flow

Mixed-species biofilms, consisting of Klebsiella pneumoniae , Pseudomonas aeruginosa , Pseudomonas fluorescens and Stenotrophomonas maltophilia , were grown in glass flow cells under either laminar or turbulent flow. The biofilms grown in laminar flow consisted of roughly circular-shaped microcolonies separated by water channels. In contrast, biofilm microcolonies grown in turbulent flow were elongated in the downstream direction, forming filamentous 'streamers'. Moreover, biofilms growing in turbulent flow developed extensive patches of ripple-like structures between 9 and 13 days of growth. Using time-lapse microscopic imaging, we discovered that the biofilm ripples migrated downstream. The morphology and the migration velocity of the ripples varied with short-term changes in the bulk liquid flow velocity. The ripples had a maximum migration velocity of 800 μm h⁻¹ (2.2 × 10⁻⁷ m s⁻¹) when the liquid flow velocity was 0.5 m s⁻¹ (Reynolds number = 1800). This work challenges the commonly held assumption that biofilm structures remain at the same location on a surface until they eventually detach.     

Hydroacoustic measurement of swimming speed of North Sea saithe in the field

Saithe Pollachius virens , tracked diurnally with a split-beam echosounder, showed no relationship between size and swimming speed. The average and the median swimming speeds were 1·05 m s⁻¹(±0·09 m s⁻¹) and 0·93 m s⁻¹, respectively. However, ping-to-ping speeds up to 3·34 m s⁻¹ were measured for 25–29 cm fish, whose swimming speeds were significantly higher at night (1·08 m s⁻¹) than during the day (0·72 m s⁻¹). The high average swimming speed could be related to the foraging or streaming part of the population and not to potential weakness of the methodology. However, the uncertainty of target location increased with depth and resulted in calculated average swimming speeds of 0·15 m s⁻¹ even for a stationary target. With increasing swimming speed the average error decreased to 0 m s⁻¹ for speeds >0·34 m s⁻¹. Species identity was verified by trawling in a pelagic layer and on the bottom.     

Stream channel experiments on downstream movement of recently emerged trout, Salmo trutta L. and salmon, S. salar L.—I. Effect of four different water velocity treatments upon dispersal rate

Four experimental stream channels were used to study instantaneous downstream dispersal rates of young trout, Salmo trutta L., and salmon, S. salur L ., relative to four different water velocities.
Young salmon showed a high rate of dispersal at a low velocity of 7.5 cm s⁻¹ and lower rates at higher velocities of 25 to 70cm s⁻¹. Trout showed their lowest rate at 25cm s⁻¹ with a slightly higher rate at 7.5 cm s⁻¹ and increasingly higher rates at velocities in excess of 25 cm s⁻¹. These results are consistent with field observations on the velocity preferences of young trout and salmon.     

Sperm structure and motility of the freshwater teleost Cottus gobio

When motility of spermatozoa of Cottos gobio was initiated with distilled water, the motility rate decreased to 0% within 1 min, and significant signs of osmotic alterations were observed at the end of the motility period. By contrast, in 50 mmol 1⁻¹ NaCl solution, the motility rate persisted for 120–140 min. In both distilled water and in 50 mmol 1⁻¹ NaCl solution, the main swimming type of spermatozoa was linear motion during the whole motility period. The initial swimming velocity (50.0 ± 2.1 μm s⁻¹) measured 10 s after motility initiation was similar in both distilled water and in 50 mmol 1⁻¹ NaCl solution. In distilled water, the velocity decreased to <20 μm s⁻¹ (locally motile) during the first minute of the motility phase. In 50 mmol 1⁻¹ NaCl solutions, it remained at a constant level during the first 60 min of the motility period, but then started to decrease to <20 μm s⁻¹ after 120 min. When 5 mmol 1⁻¹ potassium cyanide, antimycin or atractyloside was added to the 50 mmol 1⁻¹ NaCl solution, the motility period was reduced to ≤2min. Ten millimoles per litre 2-deoxy-D-glucose, malonate or a mixture of 5 mmol 1⁻¹ atractyloside and 5 mmol 1⁻¹ carnithine did not effect the duration of the motility period. This indicates that sperm energy metabolism depends mainly on respiration rate and fatty acid metabolism.     

Computer-assisted motion analysis of sperm from the common carp

Computer-assisted semen analysis (CASA) technology was applied to the measurement of sperm motility parameters in the common carp Cyprinus carpio. Activated sperm were videotaped at 200 frames s⁻¹ and analysed with the CellTrak/S CASA research system. The percentage of motile cells and both sperm head curvilinear velocity and straight-line velocity were measured following exposure of carp sperm to three predilution conditions and activation in media of differing ionic strengths and osmotic pressures. The highest percentage of motile sperm was obtained following predilution of sperm in seminal plasma and activation in Na-HEPES buffer pH 8.0. This level of motility was equalled after predilution in 200 m m KCl for 2 h. Straight-line velocities and curvilinear velocities of 130 μm s⁻¹ and 210 μm s⁻¹, respectively, were observed. Duration of motility was higher under seminal plasma predilution conditions (over 50% motile sperm at 55 s post-activation). The application provides a sound basis for the assessment of Sperm Characteristics in fish.     

Downstream migration and critical water velocities in stream channels for fry of four salmonid species

Fry of brown trout, Atlantic salmon, brook trout and lake trout were tested for downstream migration and critical velocities with a method of stepwise increasing water velocities. Each velocity was tested for 15 min before increase to the next step. Critical velocities for fry entering the free-feeding stage, defined as the stage when the fry has resorbed its yolk sac and will have to ascend from the bottom gravel to catch food, were between 0.10 and 0.25 m s⁻¹, varying among individuals and depending on species and water temperature. Downstream displacement started at lower velocities. Lake trout had the lowest critical velocity. Temperature influenced swimming performance considerably. On average, a 7°C increase in temperature resulted in a 0.05 m s⁻¹ increase in critical velocity. The fry actively searched out the low-velocity niches in the channels. Flow-sensivity gradually decreases with fry development; when the fry had reached a length of 40–50 mm they were able to tolerate water velocities higher than 0.50 m s⁻¹.     

The effect of current velocity and sediment on the drift of the mayfly Ephemerella subvaria Mcdunnough

SUMMARY. Experiments conducted in an artificial stream showed that significantly more nymphs drifted from an inorganic substrate at a mean current velocity of 28.5 cm s⁻¹ than at 18.5 cm s⁻¹. Drift density, however, was not affected. Disproportionately large numbers of nymphs drifted while current velocities were being increased from 18.5 to 28.5 cm s⁻¹.
Both drift numbers and drift density were greater in turbid water, after the addition of large amounts of inorganic sediment, than under clear-flowing conditions during dark periods but not in the light. The interaction of increasing current velocity and sediment levels resulted in a significantly greater number of drifting nymphs under lighted conditions.
Minor spates which do not seriously disturb the stream bed may initiate significant increases in macroinvertebrate drift.     

Photosynthesis and respiration of a diatom biofilm cultured in a new gradient growth chamber

Abstract A diatom biofilm was grown in a chamber developed for culture of biofilms in chemical gradients. The diatoms grew on a polycarbonate membrane filter which separated a sterile reservoir, with added phosphate, from a reservoir without phosphate. Within 3 weeks of inoculation, a thick biofilm developed on the surface of the filter. The biofilms were homogeneous and therefore suitable for calculations of O₂ diffusion fluxes from concentration profiles of O₂. Profiles of O₂, pH, and gross photosynthesis at different light intensities and liquid medium concentrations of dissolved inorganic carbon and O₂ were measured with microelectrodes. Respiratory activity in a layer of the biofilm was determined as the difference between gross photosynthesis and outflux of O₂ from that layer. The photosynthetic activity in a well-developed biofilm grown at 360 μEinst m⁻² s⁻¹ and 2.4 mM HCO₃⁻ was limited by the supply of inorganic carbon. Exposure to light above 360 μEinst m⁻² s⁻¹ stimulated gross photosynthesis as well as respiratory processes without affecting net outflux of O₂. Higher concentrations of inorganic carbon, on the other hand, enhanced gross photosynthesis without concurrent increase in respiratory rate, resulting in an increased outflux of O₂. High concentrations of O₂ in the liquid medium decreased the net outflux of O₂ with little effect on the gross photosynthesis. The effects of inorganic carbon and O₂ on the metabolic activities of the biofilm were consistent with the presence of photorespiratory activity.     

Swimming performance of European eel (Anguilla anguilla (L.)) elvers

To determine the relation between swimming endurance time and burst swimming speed, elvers of the European eel, Anguilla anguilla (L.), were made to swim at speeds from 3.6 to 7.2 L (body lengths) s⁻¹ in both fresh and sea water. Swimming endurance time of elvers averaging 7.2 cm total length decreased logarithmically with increased swimming speed from 3.0 min at 3.5 L s⁻¹ to 0.7 min at 5.0 L s⁻¹, and again logarithmically but with a lesser slope to 0.27 min at 7.5 L s⁻¹. No differences were found between fresh and sea water elvers. In still water, elvers could swim at high speeds for about 10–45m before exhaustion, depending upon speed. Elvers would be able to make virtually no progress against water currents >50 cm s⁻¹. Drift in coastal water currents and selective tidal transport probably involve swimming speeds below those tested in this study. Migration into freshwater streams undoubtedly involves avoidance of free stream speeds and a combination of burst and sustained swimming.     

The velocity of the River Tweed and its tributaries

SUMMARY. Velocity measurements at fourteen hydrometric stations in the Tweed basin are described and analysed. Along-stream velocity variations are examined and it is shown that at most flow levels the highest velocities occur at the lower, flatter end of the river system. Estimates of the frequency with which velocities of different magnitudes can be expected to occur in the river are also presented. These indicate that the velocity at most stations rarely exceeds 3.0 m s⁻¹ and for most of the time it lies between 0.25 and 1.0 m s⁻¹. The inadequacy of subjective velocity assessment is stressed and a method suggested whereby data similar to those presented could readily be produced for almost any cross-section along a river like the Tweed.     

Water velocity, growth-form and diffusion resistances to photosynthetic CO2 uptake in aquatic bryophytes

Abstract. Boundary-layer resistances of aquatic bryophytes for CO₂ diffusion in water were estimated from wind tunnel measurements of evaporation of aniline in air, using the principle of dynamic similarity. The results indicated resistances at water velocities between 0.02 and 0.2 m s ⁻¹ ranging from about 35 to 5 s mm⁻¹ and 70 to 9 s mm⁻¹, respectively, for the mat-forming liverworts Nardia compressa and Scapania undulata , measured on a projected area (canopy) basis. Over a range of velocities from 0.01 to 0.2 m s⁻¹ the estimated CO₂ boundary-layer resistance of the streamer-like shoots of the moss Fontinalis antipyretica is between about 180 and 15 s mm⁻¹. Comparison with experiments on photosynthetic ¹⁴CO₂-uptake at a range of water velocities suggests that boundary-layer resistance limits photosynthesis at velocities below about 0.01 m s^−l in Fontinalis and below about 0.1 m s⁻¹ in the mat-forming species. It is suggested that high leaf-area index allows the mat growth form more effectively to exploit the low boundary-layer resistance at high velocities while remaining relatively invulnerable to drag. By contrast, the streamer form allows Fontinalis to maximize surface area under conditions where boundary-layer resistance is limiting.     

Electrical signalling and cytokinins mediate effects of light and root cutting on ion uptake in intact plants

Nutrient acquisition in the mature root zone is under systemic control by the shoot and the root tip. In maize, exposure of the shoot to light induces short-term (within 1–2 min) effects on net K⁺ and H⁺ transport at the root surface. H⁺ efflux decreased (from −18 to −12 nmol m⁻² s⁻¹) and K⁺ uptake (∼2 nmol m⁻² s⁻¹) reverted to efflux (∼−3 nmol m⁻² s⁻¹). Xylem probing revealed that the trans-root (electrical) potential drop between xylem vessels and an external electrode responded within seconds to a stepwise increase in light intensity; xylem pressure started to decrease after a ∼3 min delay, favouring electrical as opposed to hydraulic signalling. Cutting of maize and barley roots at the base reduced H⁺ efflux and stopped K⁺ influx in low-salt medium; xylem pressure rapidly increased to atmospheric levels. With 100 m m NaCl added to the bath, the pressure jump upon cutting was more dramatic, but fluxes remained unaffected, providing further evidence against hydraulic regulation of ion uptake. Following excision of the apical part of barley roots, influx changed to large efflux (−50 nmol m⁻² s⁻¹). Kinetin (2–4  µ m ), a synthetic cytokinin, reversed this effect. Regulation of ion transport by root-tip-synthesized cytokinins is discussed.     

Swimming performance and metabolism of 0+ year Thymallus arcticus

The prolonged swimming speed and metabolic rate of 0+ year Arctic grayling Thymallus articus were examined with respect to current velocity, water temperature and fish size, and compared to conditions fish occupy in the river. Oxygen consumption (mg O₂ h⁻¹) increased with fish mass and temperature (6–23° C), with a steep increase in metabolic rate between 12 and 16° C. Absolute prolonged swimming speed (cm s⁻¹) increased rapidly with fish size (total length, L _T, and mass), however, fish in the natural stream habitat occupied current velocities between 15 and 25 cm s⁻¹ or 4  L _T s⁻¹, approximately half their potential prolonged swimming speed (10  L _T s⁻¹).     

Effects of boundary layer conductance on substomatal pressures of carbon dioxide

Abstract. Gas exchange measurements were made on single leaves of three C₃ and one C₄ species at air speeds of 0.4 and 4.0 m s⁻¹ to determine if boundary layer conductance substantially affected the substomatal pressure of carbon dioxide. Boundary layer conductances to water vapour were 0.4 to 0.5 mol m⁻² s⁻¹ at the lower air speed, and 1.2 to 1.5 mol m⁻² s⁻¹ at the higher air speed. Substomatal carbon dioxide pressures were about 5 Pa lower at low boundary layer conductance in the C₃ species, and about 3 Pa lower in the C₄ species when measurements were made at high and moderate photosynthetic photon flux densities. No evidence of stomatal adjustment to altered boundary layer conductance was found. Photosynthetic rates at high photon flux densities were reduced by about 20% at the low air speed in the C₃ species. The commonly reported values of substomatal carbon dioxide pressure for C₃ and C₄ species were found to occur only when measurements were made at the higher air speed.     

The swimming endurance of threespine sticklebacks, Gasterosteus aculeatus L., from the Afon Rheidol, Wales

The endurance of threespine sticklebacks, Gasterosteus aculeatus , swimming with pectoral fin locomotion at 20° C in a laboratory flume was measured. Each trial lasted a maximum of 480 min. At a speed of 4 body lengths per sec (L s⁻¹) all fish were still swimming at the end of the trial, but endurance decreased at higher speeds. At speeds of 5 or 6 L s⁻¹ (20–30 cm s⁻¹) a few fish still maintained labriform locomotion for the 480 min. However, at a speed of 7 L s⁻¹ all fish furled their pectoral fins and used body and caudal fin propulsion but fatigued rapidly. During sustained swimming, fish could cover distances of 6 km or more. No significant differences between males and females were found.     

Denitrification in stream epilithon: Seasonal variation in Gelbæk and Rabis Bæk, Denmark

Abstract Seasonal variations of denitrification activity were determined and compared with various environmental parameters in undisrupted epilithon communities (biofilm) from two Danish lowland streams. In the nutrient-rich Gelbæk, denitrification activity followed extensive changes in biofilm thickness, dry weight and chlorophyll a content during the season. The absolute maximum of denitrification (1.4 mmol N m⁻² d⁻¹, dark incubation) was recorded when the biofilm was best developed in the spring (April and May). Activity decreased dramatically after most of the biofilm suddenly disintegrated and peeled off in early summer. Photosynthetic O₂ production was an important controlling factor of denitrification on a diurnal scale, since the activities were always 2–3 fold lower in the light (50 μE m⁻² s⁻¹) than in the dark. In the more nutrient-poor Rabis Bæk, the biofilm was much less developed and denitrification activities were relatively small (maximum of 0.2 mmol N m⁻² d⁻¹ under dark incubation). The results indicate that productivity of the micro-algae regulates both the seasonal and diurnal patterns of denitrification in the biofilms.     

The muscle twitch and the maximum swimming speed of giant bluefin tuna, Thunnus thynnus L.

Sustained swimming of bluefin tuna was analysed from video recordings made of a captive patrolling fish school [lengths (L) 1.7–3.3 m, body mass (M) 54–433 kg]. Speeds ranged from 0.6 to 1.2 L s⁻¹ (86–260 km day⁻¹) while stride length during steady speed swimming varied between 0.54 and 0.93 L. Maximum swimming speed was estimated by measuring twitch contraction of the anaerobic swimming muscle in pithed fish 5 min after death. Muscle contraction time increased from the shortest just behind the head (30–50 ms at 20% L) to the longest at the tail peduncle (80–90 ms at 80% L) (all at 28°C). A fish (L = 2.26 m) with a muscle contraction time of 50 ms at 25% L can have a maximum tail beat frequency of 10 Hz and maximum swimming speed of 15m s⁻¹ (54km h⁻¹) with a stride length of 0.65L. With a stride length of 1 L a speed of 22.6 m s⁻¹ (81.4 km h⁻¹) is possible. Power used at maximum speed was estimated for this fish at between 10 and 40 kW, with corresponding values for the drag coefficient at a Reynolds number of 4.43 × 10⁷ of 0.0007 and 0.0027.     

The effect of turbidity and illumination on the reaction distance and search time of the marine planktivore Gobiusculus flavescens

Both reduced illumination and increased turbidity caused a significant reduction in reaction distance of Gobiusculus flavescens . The longest reaction distance, 18.9 cm for larger prey (Calanus finmarchicus) , occurred at a light level of 80 μmol m ⁻² s ⁻¹ compared to 12.9 cm for a smaller prey (Acartia clausi) at 8 μmol m⁻² s⁻¹. Above a light saturation level of 10 μmol m⁻² s⁻¹, additional light had little influence on reaction distance. In the turbidity experiments, the longest reaction distances were measured at turbidity levels of 10–20 JTU. Prey size influenced reaction distance at all tested light levels. Search time was influenced by prey size only at low illumination. With increasing turbidity, reaction distance to a group of prey was longer than to one prey.     

Wing kinematics of avian flight across speeds

To test whether wing shape affects the kinematics of wing motion during bird flight, we recorded high-speed video (250 Hz) of four species flying in a variable-speed wind tunnel. The birds flew at intervals of 2 m s⁻¹, ranging from 1 m s⁻¹ up to their respective maximum flight speed, which varied from 14 to 17 m s⁻¹ depending on the species. Kinematic data obtained from two synchronized, high-speed video cameras were analyzed using 3D reconstruction. Three species with relatively pointed, high-aspect ratio wings changed wingbeat styles according to flight speed (budgerigar, Melopsittacus undulatus ; cockatiel, Nymphicus hollandicus ; ringed turtle dove, Streptopelia risoria ). These species used a wing-tip reversal upstroke, characterized by supination of the distal wing at mid-upstroke, at equivalent airspeeds ≤7 to 9 m s⁻¹. In faster flight, they used a swept-wing upstroke, without distal wing supination. At mid-upstroke at any speed, wingspan in these species was greater than wrist span. In contrast, at all steady flight speeds, the black-billed magpie Pica hudsonia with relatively broad, low-aspect ratio wings, used a flexed-wing, feathered upstroke in which wrist spans were equal to or greater than wingspans. Our results demonstrate that wing kinematics vary gradually as a function of flight speed, and that the patterns of variation are strongly influenced by external wing shape.     

Effects of regulated discharge on burbot migration

Burbot Lota lota movement and river discharge were studied in the Kootenai River, Idaho, U.S.A. and British Columbia, Canada, downstream of Libby Dam, Montana, U.S.A. A total of 24 adult burbot with transmitters were tracked from 1994 to 2000, for analysis of a travel distance of ≥5 km in ≤10 days termed 'stepwise movement'. Of 44 'stepwise movements', significantly greater movements during pre‐spawning and spawning were observed when average daily discharges from Libby Dam were <300 m³ s⁻¹, with a mean of 176 m³ s⁻¹, similar to pre‐dam conditions. Burbot travelled at a greater rate during all seasons (3·36 km day⁻¹) at discharges >300 m³ s⁻¹(mean = 1·84 km day⁻¹) than at discharges >300 m³ s⁻¹ but no difference was found for the pre‐spawning and spawning period. Burbot that started 'stepwise movements' in low discharge conditions frequently stopped during low discharges.