Poly(3-hydroxybutyrate) depolymerases bind to their substrate by a C-terminal located substrate binding site

Abstract A fast and simple methodology was developed that enables screening of microbial strains for their ability to bind cadmium. It is based on the use of a radioisotope of cadmium (¹⁰⁹Cd) for screening colonies and for evaluation of cadmium binding. The methods described here can be used to screen new environmental isolates or to obtain mutants with altered ability to bind cadmium. Examples for the two uses are described in the paper.     

Environmentally Conscious Product Design: A Collaborative Internet-based Modeling Approach

This paper proposes a computer-based method for providing product designers with real-time environmental impact assessment. In this concurrent modeling approach, environmental experts build life-cycle models, define their interfaces, and publish them as distributed objects on the Internet. Traditional designers integrating these objects into their design models have access to the impact assessment methods provided by the environmental expert. In this paradigm, the focus shifts from providing techniques that let non-expert designers perform life-cycle impact assessments to tools that facilitate timely communication and information transfer between designers and appropriate environmental experts. Establishing real-time communication between the product design models and the environmental life-cycle models is the primary focus of this paper. Methods for establishing and maintaining the interaction between life-cycle and product design models are described. A beverage container design example illustrates how this collaborative approach can use environmental and traditional design goals to determine effective tradeoffs between design alternatives.     

A proposed framework for developing indicators of ecosystem health

Considerations involved in developing a suite of indicators to monitor regional environmental health, similar in conception to management use of leading economic indicators, are described. Linkages between human activities and well being and the state of the environment are considered essential to the evaluation of general environmental health. Biogeochemical and socioeconomic indicators are mutually affected by environmental degradation and examples of both categories of indicators are described. Desirable properties in indicators of environmental health vary with their specific management use. Different indicators are called for when collecting data to assess the adequacy of the environment, monitor trends over time, provide early warning of environmental degradation, or diagnose the cause of an existing problem. Tradeoffs between desirable characteristics, costs, and quality of information are inevitable when choosing indicators for management use. Decisions about what information to collect for which purpose can be made more rationally when available indicators are characterized and matched to management goals.     

基于规划支持系统的环境影响评价

如何在土地利用规划过程中考虑环境影响是土地利用规划中的一个难点问题.在定义活动、影响域、功能区、敏感度等概念的基础上,详细论述了土地利用规划支持系统(strate-gic tool for integrating environmental aspects in planning procedures,STEPP)将环境影响融入土地规划设计的过程.该系统是在ArcView GIS二次开发语言Avenue上开发的规划支持系统,可以方便规划相关人员在系统平台上进行信息交互,并在空间上直观、定量地表现规划过程中的环境影响及其变化.以荷兰埃德和维纳多市之间的城乡结合部为研究区进行案例研究,结果表明,该系统的定义和评价过程能较好地将环境影响融入到规划设计过程中,适时、直观地反映规划措施对环境的影响,方便了规划参与者参与规划过程,为决策者制定科学规划提供了依据.最后,对该系统如何应用于我国的规划环境影响评价提出了建议.     

Laboratory Measure of an Ecosystem Response to a Sustained Stress

A new method is described for measuring environmental stress through the use of the duckweed (Lemna minor) rhizosphere.     

The life cycle assessment management tool for technologies in eastern Europe: why and how

The knowledge and use of western-based environmental management tools like LCA (life cycle assessment) in Eastern Europe is very low. Discussions about introducing environmental management systems and taking care of environmental consequences of producing processes are very relevant now in Eastern European countries that want to become members of the European Union and to introduce their goods onto the international market. In this paper, the problems connected to introducing LCA based environmental management systems and Eco-Labeling in Eastern European countries are described. The poor financial condition of national sciences in Estonia does not appear to be the main problem. A brief overview of the development and current status of LCA research in Denmark, Finland and Japan is presented. Solutions to current problems are discussed, and experiences gained during conducting LCA research on oil shale energy production in Estonia are presented.     

Application of life cycle assessment in environmental labelling

The present state of worldwide discussions of how to apply LCA in environmental labelling, taking into account the current ISO 14 020 and ISO 14 024 works, is described. There is a consensus to use LCA as a tool for more scientific environmental labelling. The examples presented verify some practical possibilities to realise this approach. As a background to different stages of practical labelling, results from LCA studies are already used in the German “Blue Angel” scheme, e.g. for the definition of the scope in one product category, for the priorisation of specific life cycle phases and criteria, as a basis to establish a scoring system or to emphasise the importance of information on how to use environmentally sound products. Practical examples are presented in detail for hand-drying systems, paper products, milk packages, household equipment, televisions and detergents. Some future perspectives are mentioned. Presentation at “The Second International Conference on EcoBalance - The New Stage of LCA as a Common Language”, Nov. 18, 19 and 20, 1996 Tsukuba, Japan     

A microwave-based method for nucleic acid isolation from environmental samples

AIMS: A simple and rapid method was described for DNA isolation directly from activated sludge or other environmental sources, including soil and sediments. METHODS AND RESULTS: The present method is based on microwave thermal shock and provides DNA suitable for further analysis. It is also effective for RNA extraction. CONCLUSION: The protocol is effective, easy, fast and does not require the use of expensive equipment or reagents. SIGNIFICANCE AND IMPACT OF THE STUDY: The described method can be applied to difficult substrates in environmental microbiology studies.     

THE MEASUREMENT OF SELECTION ON QUANTITATIVE TRAITS: BIASES DUE TO ENVIRONMENTAL COVARIANCES BETWEEN TRAITS AND FITNESS

The use of regression techniques for estimating the direction and magnitude of selection from measurements on phenotypes has become widespread in field studies. A potential problem with these techniques is that environmental correlations between fitness and the traits examined may produce biased estimates of selection gradients. This report demonstrates that the phenotypic covariance between fitness and a trait, used as an estimate of the selection differential in estimating selection gradients, has two components: a component induced by selection itself and a component due to the effect of environmental factors on fitness. The second component is shown to be responsible for biases in estimates of selection gradients. The use of regressions involving genotypic and breeding values instead of phenotypic values can yield estimates of selection gradients that are not biased by environmental covariances. Statistical methods for estimating the coefficients of such regressions, and for testing for biases in regressions involving phenotypic values, are described.     

Liquid and gaseous fuels from biotechnology: challenge and opportunities

Abstract: This paper presents challenging opportunities for production of liquid and gaseous fuels by biotechnology. From the liquid fuels, ethyl alcohol production has been widely researched and implemented. The major obstacle for large scale production of ethanol for fuel is the cost, whereby the substrate represents one of the major cost components. Various scenarios will be presented for a critical assessment of cost distribution for production of ethanol from various substrates by conventional and high rate processes. The paper also focuses on recent advances in the research and application of biotechnological processes and methods for the production of liquid transportation fuels other than ethanol (other oxygenates; diesel fuel extenders and substitutes), as well as gaseous fuels (biogas, methane, reformed syngas). Potential uses of these biofuels are described, along with environmental concerns which accompany them. Emphasis is also put on microalgal lipids as diesel substitute and biogas/methane as a renewable alternative to natural gas. The capturing and use of landfill gases is also mentioned, as well as microbial coal liquefaction. Described is also the construction and performance of microbial fuel cells for the direct high-efficiency conversion of chemical fuel energy to electricity. Bacterial carbon dioxide recovery is briefly dealt with as an environmental issue associated with the use of fossil energy.     

Current use of and future needs for soil invertebrate functional traits in community ecology

Soil invertebrates are assumed to play a major role in ecosystem dynamics, since they are involved in soil functioning. Functional traits represent one of the main opportunities to bring new insights into the understanding of soil invertebrate responses to environmental changes. They are properties of individuals which govern their responses to their environment. As no clear conceptual overview of soil invertebrate trait definitions is available, we first stress that previously-described concepts of trait are applicable to soil invertebrate ecology after minor modification, as for instance the inclusion of behavioural traits. A decade of literature on the use of traits for assessing the effects of the environment on soil invertebrates is then reviewed. Trait-based approaches may improve the understanding of soil invertebrate responses to environmental changes as they help to establish relationships between environmental changes and soil invertebrates. Very many of the articles are dedicated to the effect of one kind of stress at limited spatial scales. Underlying mechanisms of assembly rules were sometimes assessed. The patterns described seemed to be similar to those described for other research fields (e.g. plants). The literature suggests that trait-based approaches have not been reliable over eco-regions. Nevertheless, current work gives some insights into which traits might be more useful than others to respond to a particular kind of environmental change. This paper also highlights methodological advantages and drawbacks. First, trait-based approaches provide complementary information to taxonomic ones. However the literature does not allow us to differentiate between trait-based approaches and the use of a priori functional groups. It also reveals methodological shortcomings. For instance, the ambiguity of the trait names can impede data gathering, or the use of traits at a species level, which can hinder scientific interpretation as intra-specific variability is not taken into account and may lead to some biases. To overcome these shortcomings, the last part aims at proposing some solutions and prospects. It concerns notably the development of a trait database and a thesaurus to improve data management.     

A Life-Cycle Approach to Purchasing and Using Environmentally Preferable Paper

The PaperTask Force, a group of major U.S. paper purchasers convened by the Environmental Defense Fund (EDF), recently completed a life cycle-based study of various grades of paper that examined a broad range of economic, functional, and especially environmental issue. This 28-month effort culminated in the release of a final report and recommendations intended to educate paper purchasers about the consequences of their paper purchasing decisions. The report also provides actionable steps that can be taken to increase the purchase and use of environmentally preferable paper; defined as paper that reduces environmental impacts while meeting business needs. The technical basis for the PaperTask Force recommendations is an analysis of environmental impacts associated with the entire life cycle of several major grades of paper; reaching literally from the forest to the 1andfill. The Task Force's findings and recommendations cover each of the major areas of opportunity to lessen the environmental impacts of using paper: reduction in paper use; paper recycling and buying recycled paper: forest management; and pulp and paper manufacturing. journal of Industrial Ecology I5 paper recycling     

Differentiation in vitro of primary cultures and transfected cell lines of epithelial cells derived from the thick ascending limb of Henle''s loop

The use of primary cell cultures derived from defined locations of the kidney has enabled the study of certain kidney cell type-specific characteristics under defined environmental conditions. The use of primary cell cultures, however, has a number of inherent disadvantages, many of which may be overcome by the use of differentiated cell lines of defined origin. In this paper I describe in detail an approach to: (a) the isolation and culture of primary cultures derived from the thick ascending limb of Henle's loop (TALH), and (b) the production of differentiated cell lines by the transfection of these primary cell cultures with early region SV40 virus genes. The characteristics of these cultures and other TALH-derived cell lines are described.     

Overuse of high stability antibiotics and its consequences in public and environmental health

In this paper the ecological aspects of widespread antibiotic consumption are described. Many practitioners, veterinarians, breeders, farmers and analysts work on the assumption that a antibiotics undergo spontaneous degradation. It is well documented that the indiscriminate use of antibiotics has led to the water contamination, selection and dissemination of antibiotic-resistant organisms, alteration of fragile ecology of the microbial ecosystems. The damages caused by the overuse of antibiotics include hospital, waterborne and foodborne infections by resistant bacteria, enteropathy (irritable bowel syndrome, antibiotic-associated diarrhea etc.), drug hypersensitivity, biosphere alteration, human and animal growth promotion, destruction of fragile interspecific competition in microbial ecosystems etc. The consequences of heavy antibiotic use for public and environmental health are difficult to assess: utilization of antibiotics from the environment and reduction of irrational use is the highest priority issue. This purpose may be accomplished by bioremediation, use of probenecid for antibiotic dosage reduction and by adoption of hospital infections methodology for control resistance in natural ecosystems.     

LCI data and data quality

Life cycle inventory (LCI) is becoming an established environmental management tool that quantifies all resource usage and waste generation associated with providing specific goods or services to society. LCIs are increasingly used by industry as well as policy makers to provide a holistic ‘macro’ overview of the environmental profile of a good or service. This information, effectively combined with relevant information obtained from other environmental management tools, is very useful in guiding strategic environmental decision making. LCIs are very data intensive. There is a risk that they imply a level of accuracy that does not exist. This is especially true today, because the availability of accurate LCI data is limited. Also, it is not easy for LCI users, decision-makers and other interested parties to differentiate between ‘good quality’ and ‘poor quality’ LCI data. Several data quality requirements for ‘good’ LCI data can be defined only in relation to the specific study in which they are used. In this paper we show how and why the use of a common LCI database for some of the more commonly used LCI data, together with increased documentation and harmonisation of the data quality features of all LCI data, is key to the further development of LCI as a useful and pragmatic environmental management tool. Initiatives already underway to make this happen are also described.     

Waste treatment in product specific life cycle inventories

The final disposal of waste in sanitary landfills generates environmental impacts in the form of gaseous emissions and effluents in the seepage water. In product specific Life Cycle Assessments, these environmental impacts resulting from the disposal of the product under study frequently have a strong influence on the overall results. The Sanitary Landfill (SL), like the Municipal Solid Waste Incineration (MSWI), is a complex system with a large variety of different types of waste with varying input composition. A direct determination of the environmental impacts resulting from the landfilling of a single input component, e.g. by measurements, is not possible. The model approach described in this paper shows an operationalized concept for the allocation of the environmental effects caused by the landfill process to special input components. The calculation of the landfill emissions in the model is based on the emission spectrum (landfill gas and seepage water) of an average-sized landfill in Germany and the elementary composition of the single waste fraction under consideration. The resulting reactor landfill module comprises an average split for diffuse and captured landfill emissions, the use of captured landfill gases in a gas engine and a cleaning of captured seepage water in a waste water treatment plant. A short case study demonstrates the calculation of the effects of landfilling of a defined waste fraction (bottle fraction in post-consumer plastic waste).     

Bioseparation and bioanalytical techniques in environmental monitoring

The growing use of antibody-based separation methods has paralleled the expansion of immunochemical detection methods in moving beyond the clinical diagnostic field to applications in environmental monitoring. In recent years high-performance immunoaffinity chromatography, which began as a separation technique in biochemical and clinical research, has been adapted for separating and quantifying environmental pollutants. Bioaffinity offers a selective biological basis for separation that can be incorporated into a modular analytical process for more efficient environmental analysis. The use of immunoaffinity chromatography for separation complements the use of immunoassay for detection. A widely used immunochemical detection method for environmental analyses is enzyme immunoassay. The objective of this paper is to review the status of bioaffinity-based analytical procedures for environmental applications and human exposure assessment studies. Environmental methods based on bioaffinity range from mature immunoassays to emerging techniques such as immunosensors and immunoaffinity chromatography procedures for small molecules.     

Religious attendance and frequency of alcohol use: same genes or same environments: a bivariate extended twin kinship model.

Religious attendance has been shown to correlate negatively with alcohol use. We investigated whether this relationship is driven by genetic or environmental factors. Data on frequency of church attendance and frequency of alcohol use were obtained from twins and their families in the Virginia 30,000 study. A comprehensive bivariate model of family resemblance was fitted to the data using Mx. This model is described in detail. Results indicate that genetic factors primarily account for the relationship between alcohol and church attendance in males, whilst shared environmental factors, including cultural transmission and genotype-environment covariance, are stronger determinants of this association in females.     

Environmental auditing: what is it and how can it contribute to environmental education?

The concept of environmental auditing and its use by industry and commerce are explained. A questionnaire-based method is described which can be used to introduce students to the techniques of environmental auditing, as well as developing problem-solving and communication skills and possibly even resulting in positive benefit to the educational institution.     

Hybridization of genomic DNA to microarrays: a challenge for the analysis of environmental samples

The use of DNA microarrays for detection and identification of bacteria and genes of interest from various environments (e.g. soil, sediment, water column...) is a major challenge for microbiologists working on functional diversity. So far, most of the genomic methods that have been described rely on the use of taxonomic markers (such as 16S rRNA) that can be easily amplified by PCR prior to hybridization on microarrays. However, taxonomical markers are not always informative on the functions present in these bacteria. Moreover, genes for which sequence database is limited or that lack any conserved regions will be difficult to amplify and thus to detect in unknown samples. Furthermore, PCR amplification often introduces biases that lead to inaccurate analysis of microbial communities. An alternative solution to overcome these strong limitations is to use genomic DNA (gDNA) as target for hybridisation, without prior PCR amplification. Though hybridization of gDNA is already used for comparative genome hybridization or sequencing by hybridization, yet to the high cost of tiling strategies and important data filtering, its adaptation for use in environmental research poses great challenges in terms of specificity, sensitivity and reproducibility of hybridization. Considering the very faint number of publications that have described hybridization of gDNA to microarrays for environmental applications, we confront in this review the different approaches that have been developed so far, and propose alternative strategies that may contribute to improve the development of microarrays for studying the microbial genetic structure and composition of samples of high environmental and ecological value.