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1.
Acid α-glucosidase (α-d-glucoside glucohydrolase, EC 3.2.1.20) from human placenta (70 and 76 kDa) was found to contain 4 N-glycosidic carbohydrate chains per molecule. Sugar analysis of purified enzyme revealed the presence of mannose, N-acetylglucosamine and fucose at a molar ratio of 5.0:2.0:0.6. In addition, trace amounts of galactose and N-acetylneuraminic acid were detected. The sugar chains were liberated from the polypeptides by the hydrazinolysis procedure and subsequently fractionated by gel filtration and HPLC. Purified compounds were investigated by 500-MHz 1H-NMR spectroscopy. Oligomannoside-type chains of intermediate size, e.g., Man5GlcNAcGlcNAc-ol and Man7GlcNAcGlcNAc-ol, and N-type chains of smaller size e.g., Man2–3GlcNAc[Fuc]0–1GlcNAc-ol, were demonstrated to be present at a ratio of 2:3. In addition, a small amount of sialylated N-acetyllactosamine-type chains has been found. The possible biosynthetic route of the fucose-containing small-size chains is discussed.  相似文献   

2.
Oligonucleotides containing 5-(N-aminohexyl)carbamoyl-modified uracils have promising features for applications as antigene and antisense therapies. Relative to unmodified DNA, oligonucleotides containing 5-(N-aminohexyl)carbamoyl-2′-deoxyuridine (NU) or 5-(N-aminohexyl)carbamoyl-2′-O-methyluridine (NUm), respectively exhibit increased binding affinity for DNA and RNA, and enhanced nuclease resistance. To understand the structural implications of NU and NUm substitutions, we have determined the X-ray crystal structures of DNA:DNA duplexes containing either NU or NUm and of DNA:RNA hybrid duplexes containing NUm. The aminohexyl chains are fixed in the major groove through hydrogen bonds between the carbamoyl amino groups and the uracil O4 atoms. The terminal ammonium cations on these chains could interact with the phosphate oxygen anions of the residues in the target strands. These interactions partly account for the increased target binding affinity and nuclease resistance. In contrast to NU, NUm decreases DNA binding affinity. This could be explained by the drastic changes in sugar puckering and in the minor groove widths and hydration structures seen in the NUm containing DNA:DNA duplex structure. The conformation of NUm, however, is compatible with the preferred conformation in DNA:RNA hybrid duplexes. Furthermore, the ability of NUm to render the duplexes with altered minor grooves may increase nuclease resistance and elicit RNase H activity.  相似文献   

3.
The evaporation rate (NH2O) of liquid in a shaking flask was measured under various shaking conditions: temperature, humidity, flask shape, liquid volume in the flask (VL), length of the stopper in the flask neck (LC), rotational speed of the shaker (N), and wind velocity (VW). The rate was significantly affected by these factors, and the existence of a distribution of water vapor pressure was suggested inside and outside the flask. To predict the evaporation rate, the following empirical equation was derived by the least squares method: NH2O=1.26×10−2SF1.18LF−1.3 (psp)1.24VL0.11N0.05VW0.26LC−0.37 where, SF is the cross-sectional area of flask neck, LF is the length of flask neck, ps is the saturated partial pressure of water vapor at the temperature of the air surrounding the flask, and p is the partial pressure of water vapor in the flask.  相似文献   

4.
A heparan sulphate fraction (uronic acid composition: 20% sulphated iduronate, 15% iduronate and 65% glucuronate of total uronate) was separated into aggregating and non-aggregating chains by gel chromatography. 13C-NMR analyses revealed that non-aggregating chains had a higher degree of sulphation than did aggregating chains. In aggregating chains, there was more N-acetyl-glucosamine than N-sulphamidoglucosamine; the extent of C-6 sulphation of the latter moiety was low and most of the iduronate residues were non-sulphated. In non-aggregating chains, the N-acetyl-to-N-sulphate ratio was approx. 2 : 1, the N-sulphated glucosamines were also largely C-6 sulphated and the sulphated iduronates were concentrated to these species.Both preparations were subjected to deaminative cleavage which produces fragments like uronate-(N-acetylglucosamine-uronate)n-anhydromannose. Tetrasaccharides (n = 1) were further fractionated into non-, mono-, di- and trisulphated species by ion-exchange chromatography. The tetrasaccharides have the general carbohydrate structure uronate-N-acetylglucosamine-glucuronate-anhydromannose. Non-reducing terminal glucuronate was removed by β-glucuronidase. The results showed that saccharides containing glucuronate in both positions were more prevalent in the products of aggregating chains. The β-glucuronidase-resistant saccharides (carrying either sulphated or non-sulphated iduronate in non-reducing terminal position) were oxidised with periodate under conditions where non-sulphated residues are degraded, whereas sulphated residues are resistant. Mono-sulphated and di-sulphated tetrasaccharides from aggregating chains were extensively degraded indicating that iduronate-N-acetylglucosamine-glucuronate-anhydromannose was the major sequence.In saccharides from non-aggregating chains iduronate was frequently sulphated. The results of this and previous investigations (Fransson, L.-Å., Nieduszynski, I.A. and Sheehan, J.K. (1980) Biochim. Biophys. Acta 630, 287–300) indicate that an alternating arrangement of iduronate and glucuronate in aggregating chains is present both in N-sulphated block regions and in regionsthat carry alternating N-acetyl- and N-sulphated glucosamine.  相似文献   

5.
The hetero-functionalized macrocyclic complex [CuL2](ClO4)2 bearing one N-CH2C(NH)OMe and one N-CH2CN groups as well as [CuL3](ClO4)2 bearing two N-CH2C(NH)OMe groups have been prepared selectively by the reaction of [CuL1](ClO4)2 (L2 = 2,13-bis(cyanomethyl)-5,16-dimethyl-2,6,13,17-tetraazatricyclo[16.4.0.1.1807.12]docosane) with methanol. The N-CH2C(NH)OCH3 group in [CuL2](ClO4)2 is quite inert against acid hydrolysis. On the other hand, the functional pendant arms in [CuL3](ClO4)2 readily undergo acid hydrolysis. Both [CuL4](ClO4)2 bearing one N-CH2COOCH3 and one N-CH2C(NH)OCH3 groups and [CuL5](ClO4)2 bearing two N-CH2OOCH3 groups have been prepared by the stepwise hydrolysis of [CuL3](ClO4)2. The reactivity of the functional pendant arms in [CuL1](ClO4)2 or [CuL3](ClO4)2 is quite different from that in [NiL1](ClO4)2 or [NiL3](ClO4)2. The crystal structure of [CuL2](ClO4)2 shows that the complex has a slightly distorted square-pyramidal coordination polyhedron with an apical Cu-N (N-CH2C(NH)OCH3 group) bond. The N-CH2C(NH)OCH3 and/or N-CH2COOCH3 groups in [CuL3](ClO4)2, [CuL4](ClO4)2, and [CuL5](ClO4)2 are involved in coordination, and the complexes have distorted trans-octahedral coordination polyhedron. The axial Cu-N (N-CH2C(NH)OCH3 group) distance (2.396(7) Å) of [CuL4](ClO4)2 is considerably longer than the Cu-N (N-CH2C(NH)OCH3 group) distance (2.169(3) Å) of [CuL2](ClO4)2.  相似文献   

6.
Sulfate incorporation into carbohydrate of lutropin (LH) has been studied in sheep pituitary slices using H235SO4. Labeled ovine LH was purified to homogeneity by Sephadex G-100 and carboxymethyl-Sephadex chromatography from both the incubation medium and tissue extract. Autoradiography of the gel showed only two protein bands which comigrated with the α and β subunits of ovine LH in both the purified ovine LH and the immunoprecipitate obtained with LH-specific rabbit antiserum. Furthermore, [35S]sulfate was also incorporated into several other proteins in addition to LH. The location of 35SO42? in the oligosaccharides of ovine LH was evidenced by its presence in the glycopeptides obtained by exhaustive Pronase digestion. The location and the point of attachment of sulfate in the carbohydrate unit were established by the isolation of 4-O-[35S]sulfo-N-acetylhexosaminyl-glycerols and 4-O-[35S]sulfo-N-acetylglucosaminitol from the Smith degradation products and by the release of 35SO42? by chondro-4-sulfatase. Thus, the present line of experimentation indicates the presence of sulfate on both the terminal N-acetylglucosamine and N-acetylgalactosamine in the oligosaccharide chains of the labeled ovine LH.  相似文献   

7.
Rajendrudu  G.  Naidu  C.V.  Mallikarjuna  K. 《Photosynthetica》2000,36(4):627-630
Two teak (Tectona grandis L.f.) phenotypes differing in their leaf length/breadth ratios were subjected to water stress by withholding water supply for three weeks. Growth rates of whole plants, developing leaves (1st and 2nd from shoot apices), and 2nd and 3rd internodes were higher in broad leaved (BL) phenotype than in narrow leaved (NL) phenotype before and after imposing water stress treatment. However, the effect of water stress on these parameters was higher in the BL phenotype than in the NL one. Diurnal course of net photosynthetic rate (P N) of 3rd or 4th leaves from shoot apices measured under well-watered conditions was higher for the NL than BL phenotype. P N, stomatal conductance (g s), and transpiration rate (E) in both phenotypes were negatively affected by water stress and their decline under water stress was significantly higher in the BL than NL plants.  相似文献   

8.
Blood group A, B, H, Lea, Leb, and I substances, their products of periodate oxidation and Smith degradation, and disaccharides containing 3-O-substituted reducing N-acetylhexosamines were treated with base-borohydride under three defined sets of conditions. Procedures for the assay and quantitation of the possible reduced base-degradation products, including hexenetetrol(s), 3-deoxygalactitol, galactitol, reduced chromogens, N-acetylglucosaminitol, and N-acetylgalactosaminitol are described. Extensive degradation occurred by two methods. 1 m NaBH4 in 0.05 n NaOH at 50 ° cleaves the glycosidic linkage of the oligosaccharide chains from serine and threonine with reduction of the terminal-reducing N-acetylgalactosamine with minimal base degradation. The method is useful for isolation of complete reduced oligosaccharides from blood group substances; the structural implications of the free and oligosaccharide-bound N-acetylgalactosaminitol released are discussed.  相似文献   

9.
A series of bis-salicylidene based N2S2 copper macrocycles were prepared, structurally characterised and subjected to electrochemical analysis. The aim was to investigate the effects of length of polymethylene chains between either the imine donors or the sulfur donors on redox state and potential of the metal. The complexes structurally characterised had either distorted square planar or tetrahedral geometries depending on their oxidation state (Cu2+ or Cu+, respectively), and the N–(CH2)n–N bridge was found to be most critical moiety in determining the redox potential and oxidation state of the copper macrocycles, with relatively little change in these properties caused by lengthening the S–(CH2)n–S bridge from two to three carbons. In fact, a weakness was observed in the complexes at the sulfur donor, as further lengthening of the S–(CH2)n–S methylene bridge to four carbons caused fission of the carbon–sulfur bond to give dimeric rings and supramolecular assemblies. Cu+ complexes could be oxidised to Cu2+ by tert-butylhydroperoxide, with a corresponding change in the spectrophotometric properties, and likewise Cu2+ complexes could be reduced to Cu+ by treatment with β-mercaptoethylamine. However, repeated redox cycles appeared to compromise the stability of the macrocycles, most probably by a competing oxidation of the ligand. Thus the copper N2S2 macrocycles show potential as redox sensors, but further development is required to improve their performance in a biochemical environment.  相似文献   

10.
β-N-Acetylhexosaminidases were detected in 10 insects including species of Lepidoptera, Coleoptera, Hemiptera, and Orthoptera. Two enzymes were purified from the tobacco hornworm, Manduca sexta (L.). EI was detected in larval and pharate pupal molting fluid, integument, and pupal hemolymph while EII was found in larval and pupal hemolymphs. They are acidic hydrolases with similar molecular weights (6.1 × 104), molar extinction coefficients at 280 nm (1.9 × 105 liters mol?1 cm?1), and pH optima (pH 6). They differ in the number of polypeptide chains per molecule (EI is a single chain and EII consists of two polypeptide chains), amino acid composition, extent of glycosylation (EII is probably a glycoprotein), isoelectric point (pIEI = 5.9 and pIEII ~- 5.1), tissue distribution, and reactivities toward nitrophenylated N-acetylglucosamine (kcat,I = 328 s?1 and kcat,II = 103 s?1) and N,N′-diacetylchitobiose (kcat,I = 307 s?1 and kcat,II = 3 s?1). These results suggest that EI is a chitinase and that EII may function as a hexosaminidase in vivo.  相似文献   

11.
NMR relaxation of arginine (Arg) 15Nε nuclei is useful for studying side-chain dynamics of proteins. In this work, we studied the impact of two geminal 15N–15N scalar couplings on measurements of transverse relaxation rates (R 2 ) for Arg side-chain 15Nε nuclei. For 12 Arg side chains of the DNA-binding domain of the Antp protein, we measured the geminal 15N–15N couplings ( 2 J NN ) of the 15Nε nuclei and found that the magnitudes of the 2 J NN coupling constants were virtually uniform with an average of 1.2 Hz. Our simulations, assuming ideal 180° rotations for all 15N nuclei, suggested that the two 2 J NN couplings of this magnitude could in principle cause significant modulation in signal intensities during the Carr–Purcell-Meiboom–Gill (CPMG) scheme for Arg 15Nε R 2 measurements. However, our experimental data show that the expected modulation via two 2 J NN couplings vanishes during the 15N CPMG scheme. This quenching of J modulation can be explained by the mechanism described in Dittmer and Bodenhausen (Chemphyschem 7:831–836, 2006). This effect allows for accurate measurements of R 2 relaxation rates for Arg side-chain 15Nε nuclei despite the presence of two 2 J NN couplings. Although the so-called recoupling conditions may cause overestimate of R 2 rates for very mobile Arg side chains, such conditions can readily be avoided through appropriate experimental settings.  相似文献   

12.
The crystal structures of alkyl 2-deoxy-α-d-arabino-hexopyranosides, with the alkyl chain lengths from C8 to C18, are established by the single crystal X-ray structural determination. The even-alkyl chain length derivatives crystallized orthorhombic, with space group P212121, whereas the odd-alkyl chain length derivatives crystallized monoclinic, with space group P21. The sugar moieties retained a 4C1 chair conformation and the conformation of the alkyl chains was all-trans. The molecules formed a bilayer structure, in which alkyl chains were interdigitated. The hydrogen bonds, originating from the sugar moieties, were observed in adjacent layers and also within the same layer, resulting in the formation of infinite chains. The alkyl chains arranged parallel to each other and formed planar structures. The thermal properties of the alkyl 2-deoxy glucosides were analyzed further. It was observed that none of the derivatives exhibited mesomorphism. This study establishes that the absence of the hydroxyl group at C-2 of the sugar moiety results in a non-mesogenic nature of the alkyl 2-deoxy-α-d-glycosides, as opposed to the profound mesogenic nature of the normal alkyl glycosides.  相似文献   

13.
Synthesis of laminin by mouse preimplantation embryos was examined by specific immunoprecipitation of [35S]methionine-labeled cell lysates. The three polypeptide subunits of laminin, A, B1, and B2, are not necessarily synchronously expressed during development. Oocytes and eggs synthesize only one immunoprecipitable polypeptide, which comigrates with the intracellular B1 chains made by PYS cells and contains N-linked oligosaccharide residues which are sensitive to endo-β-N-acetylglucosaminidase H. From the 4- to 8-cell stage, only B1 and B2 polypeptides are synthesized, whereas from the 16-cell stage onwards all three laminin polypeptides are made.  相似文献   

14.
Reaction of O,O′-diisopropylphosphoric acid isothiocyanate (iPrO)2P(O)NCS with 2- or 3-aminopyridine leads to the new N-phosphorylated thioureas RNHC(S)NHP(O)(OiPr)2 (R = 2-Py, HLI; 3-Py, HLII). Reaction of the potassium salt KLI with Ni(II) in aqueous EtOH leads to the new complex Ni[2-PyNHC(S)NP(O)(OiPr)2-N(Py),N(P),O]2, where the metal cation is coordinated by two deprotonated ligands LI through the pyridine and phosphorylamide nitrogen atoms, and the PO oxygen atoms. Using KLII leads to an oligomeric (or polymeric) structure, where the Ni(II) cation is coordinated by two anionic ligands LII through the CS sulfur atoms and the P-N nitrogen atoms, and the pyridine nitrogen atoms of neighboring molecules. The new compounds were investigated by 1H and 31P{1H} NMR spectroscopy, and microanalysis. Single crystal X-ray diffraction studies showed HLI forms both intra- and intermolecular hydrogen bonds, which in turn lead to the formation of a polymeric chain. Moreover, π?π stacking interactions were observed between molecules of two neighboring chains.  相似文献   

15.
A series of N-alkylmaleimides, varying in chain length from N-ethylmaleimide and N-butyl to N-octyl, inclusive, was shown to effectively inactivate rat ovarian 20α-hydroxysteroid dehydrogenase at pH 7.7, 25 °C. The apparent second-order rate constants for inactivation were observed to increase with increasing chain length of the N-alkylmaleimide used. Positive chain length effects were also indicated by the Kd values for N-alkylmaleimides calculated from double-reciprocal plots resulting from the saturation kinetics observed in the inactivation reactions. The maximum rate constant for inactivation at enzyme saturation was 0.3 min?1 for each maleimide studied. NADP-and coenzyme-competitive inhibitors such as 3-aminopyridine adenine dinucleotide phosphate and various adenosine derivatives protected the enzyme against maleimide inactivation, whereas no protection was observed with the steroid substrate, 20α-hydroxypregn-4-en-3-one. The pH profile for maleimide inactivation indicated the involvement of an enzyme functional group with a pKa near 8.0. Sulfhydryl modification was also indicated by fluorescein mercuric acetate inactivation and titration experiments. Inactivation of the enzyme by a lysine-modifying reagent exhibited a pH profile differing from that observed in the maleimide inactivation process. It is proposed that N-alkylmaleimides inactivate the enzyme through covalent modification of sulfhydryl groups located in a nonpolar region of the enzyme.  相似文献   

16.
The synthesis and evaluation of Cy[N,N]NiX2 complexes (where Cy[N,N] = C6H11NCHCHNC6H11; X = Cl, Br) as catalysts for atom transfer radical polymerization are reported. Cy[N,N]NiCl2 offers poor control over the polymerization of MMA and styrene due to catalyst insolubility. The more soluble bromo catalyst Cy[N,N]NiBr2, promotes rapid styrene polymerization, but with inefficient initiation, affording higher than expected molecular weights based on [M]o/[I]o ratios. Utilizing 1-PEBr results in efficient initiation to give low polydispersities (Mw/Mn ∼ 1.2) and polystyrene molecular weights that correlate with monomer:initiator ratios.  相似文献   

17.
The niobium complex [NbCpClCl4] (CpClη5-C5H4(SiCl2Me)) (1) with a functionalized (dichloromethylsilyl)cyclopentadienyl ligand was isolated by the reaction of [NbCl5] with C5H4(SiCl2Me)(SiMe3). Complex 1 was a precursor for the imido silylamido derivative [NbCpNCl2(NtBu)] (CpNη5-C5H4[SiClMe(NHtBu)]) (2) after addition of LiNHtBu, which subsequently gave the dichlorosilyl compound [NbCpClCl2(NtBu)] (3) when reacted with SiCl3Me. Addition of LiNHtBu to complex 2 gave the niobium amido complex [NbCpNCl(NHtBu)(NtBu)] (4), which slowly evolved with exchange of the niobium-amido and the silicon-chloro groups to give the dichloroniobium complex [NbCpNNCl2(NtBu)] (CpNNη5-C5H4[SiMe(NHtBu)2]) (5). Reaction of 2 with excess LiNHtBu gave the silyl-η-amido constrained geometry complexes [Nb{η5-C5H4[SiMe(NHtBu)(-η-NtBu)]}(NHtBu)(NtBu)] (6) and [Nb{η5-C5H4[SiClMe(-η-NtBu)]}(NHtBu)(NtBu)] (7), whereas addition of one equimolecular amount of LiNHtBu to 5 in C6D6 afforded complex [NbCpNNCl(NHtBu)(NtBu)] (8). All of the new complexes were characterized by 1H, 13C and 29Si NMR spectroscopy.  相似文献   

18.
This computational study is intended to shed light on the crystalline and molecular structure, together with the hydrogen bonding (H-bonding) differences between two forms of native cellulose. DFT calculations were carried out to characterize the 17O, 1H and 13C nuclear magnetic resonance (NMR) parameters in cellulose Iα and Iβ with the B3LYP functional employing the 6–311++G7 and 6–31+G1 basis sets. Geometry optimization revealed that the average HB length is shortened by 0.01–0.08 Å when the chains are aligned, whereas the average bond angle increases by about 4–8° exhibiting the enhancement of HB strength. For the isolated cellotetramer chains, the isotropic 17O–H chemical shifts were plotted as a function of HB length. Our results indicated that as the HB length in cellotetramer Iα increases, the 17O–H chemical shift isotropy increases, but this parameter changes in the opposite direction for the other structure. Moreover, B3LYP/6–311++G7 calculations reveal that there is an acceptable correlation between the calculated 13C chemical shifts of the two structures and their experimental values.  相似文献   

19.
The preparations are reported of the ‘extended reach’ ligand N,N-o-phenylene-dimethylenebis(pyridin-4-one) (o-XBP4) and of a range of its metal complexes with Mn(II), Co(II), Ni(II), Cu(II) and Zn(II), two of which have been shown by X-ray studies to have polymeric structures. In the compound [Mn(o-XBP4)(H2O)2(NO3)](NO3) the o-XBP4 ligands link ‘Mn(H2O)2(NO3)’ units into chains which are then cross-linked into sheets by the bridging action of the coordinated nitrate. In [Cu(o-XBP4)(NO3)2] chains are also formed by the bridging action of the o-XBP4 ligands but here they simply pack trough-in-trough with no nitrate cross-linking. X-band EPR spectra are reported for these and the other Mn and Cu compounds as are relevant spectroscopic results for the other complexes.  相似文献   

20.
Degradation of heparan sulfate (HS) in the extracellular matrix by heparanase is linked to the processes of tumor invasion and metastasis. Thus, a heparanase inhibitor can be a potential anticancer drug. Because HS with unsubstituted glucosamine residues accumulates in heparanase-expressing breast cancer cells, we assumed that these HS structures are resistant to heparanase and can therefore be utilized as a heparanase inhibitor. As expected, chemically synthetic HS-tetrasaccharides containing unsubstituted glucosamine residues, GlcAβ1–4GlcNH3+(6-O-sulfate)α1–4GlcAβ1–4GlcNH3+(6-O-sulfate), inhibited heparanase activity and suppressed invasion of breast cancer cells in vitro. Bifunctional NDST-1 (N-deacetylase/N-sulfotransferase-1) catalyzes the modification of N-acetylglucosamine residues within HS chains, and the balance of N-deacetylase and N-sulfotransferase activities of NDST-1 is thought to be a determinant of the generation of unsubstituted glucosamine. We also report here that EXTL3 (exostosin-like 3) controls N-sulfotransferase activity of NDST-1 by forming a complex with NDST-1 and contributes to generation of unsubstituted glucosamine residues.  相似文献   

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