Coral in Alaska: distribution,abundance, and species associations

To help identify fishery management actions that minimize the adverse impacts of fishing activities on corals in Alaska, the distribution and abundance of corals were analyzed based on trawl survey data collected during 1975–1998. We also examined the species of commercially managed fish that are associated with coral. Soft corals, primarily Gersemia sp. (=Eunephthya sp.), were the most frequently encountered corals in the Bering Sea. In the Aleutian Islands gorgonian corals, primarily in the genera Callogorgia, Primnoa, Paragorgia, Thouarella, and Arthrogorgia were the most common corals. In the Gulf of Alaska, gorgonian corals, primarily in the genera Callogorgia and Primnoa, and cup corals, primarily `Scleractinia unidentified', occurred most frequently. The Aleutian Islands area appears to have the highest abundance and diversity of corals. Some fish groups are associated with particular types of coral. Rockfish (Sebastes spp. and Sebastolobus alascanus) and Atka mackerel (Pleurogrammus monopterygius) were the most common fish captured with gorgonian, cup, and hydrocorals, whereas flatfish and gadids were the most common fish captured with soft corals.     

The Role of Minerals in Food Selection in a Black Howler Monkey (Alouatta Pigra) Population in Belize Following a Major Hurricane

As plants may contain low levels of some minerals including sodium, copper, and phosphorous, herbivores may become deficient in these nutrients. In 2001, Hurricane Iris hit the Monkey River Forest in Belize causing substantial damage to the food supply of the black howler monkey population (Alouatta pigra) living there. This included an 18‐month absence in fruit production and a complete loss of figs that are high in calcium. In this article, we describe the post‐hurricane diet of this monkey population and compare the mineral content of food items to each other and to recommendations for non‐human primates [NRC 2003]. We also investigate food selection in relation to potentially limiting minerals. Behavioral data from four groups of howlers (2002–2006) and samples of all ingested food items were collected and a sample of 99 plant from 18 food species was analyzed for mineral content. Unexpectedly, the post‐hurricane diet contained more mature leaves than new leaves despite the availability of new leaves. Leaves contained higher amounts of minerals than reproductive parts and with the exception of Cecropia peltata stems, plant parts were low in sodium. Cecropia peltata is a pioneer species that grows following habitat disturbance thus the ingestion of these stems may be a potential mechanism to avoid sodium deficiency in this damaged forest. Calcium and zinc were found above recommended values in most food items; however, both positively predicted food selection, which may reflect a difference between their abundance and their bioavailability. However, as mature leaves contained more calcium than other plant parts, their high post‐hurricane consumption may also be a response to the absence of figs and the need to find an alternate calcium source. This study highlights how habitat disturbance may affect mineral abundance and the dietary choices of primates. Am. J. Primatol. 74:1054‐1063, 2012. © 2012 Wiley Periodicals, Inc.     

Long-term demographic surveys reveal a consistent relationship between average occupancy and abundance within local populations of a butterfly metapopulation

Species distribution models are the tool of choice for large-scale population monitoring, environmental association studies and predictions of range shifts under future environmental conditions. Available data and familiarity of the tools rather than the underlying population dynamics often dictate the choice of specific method – especially for the case of presence–absence data. Yet, for predictive purposes, the relationship between occupancy and abundance embodied in the models should reflect the actual population dynamics of the modelled species. To understand the relationship of occupancy and abundance in a heterogeneous landscape at the scale of local populations, we built a spatio-temporal regression model of populations of the Glanville fritillary butterfly Melitaea cinxia in a Baltic Sea archipelago. Our data comprised nineteen years of habitat surveys and snapshot data of land use in the region. We used variance partitioning to quantify relative contributions of land use, habitat quality and metapopulation covariates. The model revealed a consistent and positive, but noisy relationship between average occupancy and mean abundance in local populations. Patterns of abundance were highly variable across years, with large uncorrelated random variation and strong local population stochasticity. In contrast, the spatio-temporal random effect, habitat quality, population connectivity and patch size explained variation in occupancy, vindicating metapopulation theory as the basis for modelling occupancy patterns in fragmented landscapes. Previous abundance was an important predictor in the occupancy model, which points to a spillover of abundance into occupancy dynamics. While occupancy models can successfully model large-scale population structure and average occupancy, extinction probability estimates for local populations derived from occupancy-only models are overconfident, as extinction risk is dependent on actual, not average, abundance.     

The shallow water gobiid assemblage of the Venice Lagoon: abundance, seasonal variation and habitat partitioning

The gobiid assemblage of the Venice Lagoon shallow waters was investigated by means of a semi‐quantitative standardized sampling (using a small beach seine), stratified into five main types of shallow subtidal habitats and conducted on a seasonal basis during 1 year. The degree of overlap in resource utilization among six coexisting goby species was assessed, along both the time axis, by analysing the seasonal variation in abundance and reproductive status (as revealed by the gonado‐somatic index) and the habitat axis, by comparing species abundance across different habitat types and controlling for the effects of some abiotic factors. Smaller species, and especially the marbled goby Pomatoschistus marmoratus , dominated the local assemblage. Although the cycle of shallow water colonization and seasonal variation in total abundance were basically similar, species showed differences in timing of reproduction and recruitment, as well as in habitat preference. The larger species belonging to the genera Gobius and Zosterisessor tended to overlap their habitat use, being more abundant in seagrass habitats than in the unvegetated habitats, whereas the smaller species belonging to the genera Knipowitschia and Pomatoschistus avoided seagrasses, preferring in most cases mud flats and salt marsh creeks. Within these two groups of species some further slight differences in species habitat preference, relationship with abiotic factors and reproductive ecology could be detected. Results are discussed in the light of both ecological mechanisms underlying coexistence of closely related species and the current knowledge of the phylogeny of Mediterranean gobies.     

Ecology of the Zanzibar Red Colobus Monkey: Demographic Variability and Habitat Stability

We examined the Zanzibar red colobus' (Procolobus kirkii) social structure and population dynamics in relation to the density, diversity and dispersion of food resources in ground-water forest and agricultural land, which we characterized in terms of red colobus food species density, diversity, basal area and dispersion. We used transect sampling and group follows to describe population dynamics and social systems. Two agricultural areas, SJF Shamba and Pete Village, had higher densities and more uniformly dispersed red colobus food tree species than those of the ground-water forest. Red colobus at these two sites had greater population densities and natality, and smaller home ranges than red colobus in the ground-water forest. However, these findings apply to a very small area of agricultural land (approximately 18 ha) that is contiguous with an area of the forest reserve having a high density of red colobus. It is not representative of agricultural areas elsewhere on Zanzibar which support much lower densities or no red colobus. Although agricultural areas contiguous with the forest reserve had high densities of red colobus, they appear to be very unstable. Within the agricultural areas, we observed higher intergroup variation in group size and composition, study groups that decreased dramatically in size and disappeared from the study site, significantly lower levels of juvenile recruitment, and red colobus food trees that exhibited definite signs of overbrowsing. This apparent instability in the subpopulation of red colobus utilizing agricultural systems probably reflects the lower basal area of food trees and the greater fragmentation of suitable habitat and floristic dynamics due to human activities in these areas. A fusion-fission social system occurred only in the ground-water forest subpopulation, which we hypothesize to be due to highly clumped food resources.     

Habitat preferences,seasonal abundance and diets of rodents in Alage,Southern Ethiopia

To understand habitat preferences, seasonal abundance and diets of rodents in wet and dry season surveys were conducted in Alage, Southern Ethiopia. Sherman and snap traps were used to capture rodents from the four habitats: bushland, Acacia woodland, maize and wheat farmlands. A total of 3312 trap nights, from the four trapping habitats, yielded 776 individuals that represented 11 species of rodents. The distribution of rodents varied between habitats and seasons. Wet season rodent abundance was 52.3% while in the dry season it was 47.7%. Seasonal differences in species abundance were insignificant. Bushland habitat had high wet and dry season abundances with 137 and 211 individuals, respectively. Abundance was low in maize farm (57 individuals) in the wet season and wheat farm (10 individuals) in the dry season. Stomach content composition analysis of snap‐trapped rodents from different habitats showed differences between species and across seasons. Six rodent species were recorded as pests on the farmlands in this study area. In conclusion, variation in habitat preferences and diet of rodents in different habitats and across seasons might be due to the role of ground cover and food sources.     

Influences of habitat complexity on the diversity and abundance of epiphytic invertebrates on plants

SUMMARY 1. The compound influence of habitat complexity and patch size on stream invertebrate assemblages associated with submerged macrophytes was investigated through field sampling of two natural macrophyte species with contrasting leaf morphologies (complex, Ranunculus yezoensis; simple, Sparganium emersum) and an experiment with two artificial plants with different levels of morphological complexity. 2. The artificial plant experiment was designed to separate the effects of habitat area (patch size) and habitat complexity, thus enabling a more rigorous assessment of complexity per se than in previous studies where only a single patch size was used. Simple and complex artificial plants were established with five different patch sizes corresponding to the range found in natural plants. 3. Invertebrates occurred on both complex and simple forms of natural and artificial plants at similar abundances with dipterans and ephemeropterans being predominant. Taxon richness was higher on structurally complex Ranunculus than on simple Sparganium and was similarly higher on the complex artificial plant than on the simple one, over the entire range of habitat patch sizes. Thus, architectural complexity affected the taxon richness of epiphytic invertebrates, independently of habitat scale. 4. On the natural plants there was no difference in the abundance (both number of individuals and biomass) of invertebrates between simple and complex forms, while on artificial plants more invertebrates occurred on complex than on simple forms. The amount of particulate organic matter, >225 μm (POM) and chlorophyll a showed mixed patterns on natural and artificial plants, suggesting that the availability of these resources is not an overriding proximate factor controlling invertebrate abundance on plants. The difficulty of extrapolating from experimental results involving use of artificial plants is discussed, especially when considering the relationship between habitat structure and the occurrence of epiphytic invertebrates on natural plants.     

Habitat and abundance of Balitoridae in small rivers of central Thailand

Balitorids were collected, by electrofishing, from small rivers across central Thailand between October 2000 and March 2004. Total balitorid abundance for the 18 species averaged 3·8% of the cumulative total for all fishes. Balitorid species numbers and abundance varied directly with elevation to c. 400 m, substratum particle size and ambient silica concentration. Species numbers at stations were modest and few species were widely distributed. Species associations related significantly with elevation, temperature and ambient concentrations of dissolved oxygen and silica. Turbidity was also significant but probably an artefact. Habitat separation clearly occurs among some balitorids, particularly the less common species, and probably represents species-specific direct and indirect habitat effects. The more common balitorid species tended to occur in similar habitats where the significant factors approximated average values. For these species, coexistence is suggested to occur through food resource sharing possibly facilitated through adaptations. Balitorid distributions in low-order rivers are attributed to the direct and indirect influences of the environment on energy available for the performance of essential activities.     

Species diversity and abundance of small mammals in Nechisar National Park,Ethiopia

Species diversity and abundance of small mammals were studied in Nechisar National Park, Ethiopia, during August 2008 – March 2009. Twenty species of rodents and four species of insectivores were recorded from the study area. Mastomys natalensis (17.37%), Arvicanthis dembeensis (17.09%), Mastomys erythroleucus (8.90%), Stenocephalemys albipes (8.76%), Arvicanthis niloticus (8.19%), Acomys cahirinus (7.34%), Lemniscomys striatus (6.92%), Gerbilliscus nigricauda (6.21%), Grammomys dolichurus (3.67%), Gerbilliscus robusta (2.12%), Mus proconodon (1.98%), Mus mahomet (1.41), Dendromus melanotis (1.27%), Arvicanthis abyssinicus (1.13%), Mus musculus (0.99%), Praomys fumatus (0.85%), Xerus erythropus (0.85%), Lemniscomys barbarus (0.71%), Mus tenellus (0.71%) and Otomys typus (0.28%) were the rodents and their respective relative abundance in the study area. Crocidura olivieri (1.55%), Crocidura fumosa (0.85%), Crocidura bicolor (0.57%) and Elephantulus rufescens (0.28%) were the insectivores recorded with their respective relative abundance. Mastomys natalensis was the most abundant and O. typus and E. rufescens were the least (two each). Diversity of small mammals ranged from 2.299 to 2.625 with an average of 2.412. The highest small mammal diversity was in grasslands and the lowest was in Lake Chamo shore. Small mammal density varied from 5 to 43 ha^?1 and biomass varied from 244 to 2559 g ha^?1 with significant changes in relation to seasons and habitats.     

The effect of habitat stability on benthic invertebrate communities: the utility of species abundance distributions

Spatial and temporal patterns in the species abundance distribution of benthic invertebrate communities of 11 freshwater habitats (10 streams and a wind-swept lake shore) were examined with respect to habitat stability. Abundance patterns varied markedly between seasons at most sites. However, mean abundance distributions at 4 of the 5 unstable sites and the 2 most stable sites were dominated by one or two taxa with a large number of rare species, whereas sites of intermediate stability had more equitable distributions. Both the log series and log normal distributions were statistically indistinguishable, at the 5% level, from all the observed mean abundance patterns. In contrast, graphical comparisons of the observed and fitted distributions suggested the log series may be the better fit at most of the unstable sites and the two most stable sites, whereas the more equitable distribution at sites of intermediate stability suggested the log normal distribution was the better fit. If conditions at a site favoured one or two species, either through severe physical conditions, or through competitive superiority in the absence of disturbance then the log series distribution may result. However, if no species in the community was strongly advantaged over others, a log normal distribution should result. Given the discriminating power of the appropriate statistical test it may not, however, be possible to pick up these differences without graphical comparisons as well.     

物种多度和径级尺度对于评价群落系统发育结构的影响: 以尖峰岭热带山地雨林为例

研究不同径级尺度群落系统发育多样性有助于了解不同年龄模式下物种的亲缘关系及其群落系统发育结构; 但是关于物种多度对群落系统发育结构影响的研究较少。以海南尖峰岭热带山地雨林群落为例, 首先在不同径级尺度比较物种多度加权与否分别对4个广泛采用的系统发育指数的影响, 继而利用其中2个经过标准化处理的系统发育多样性指数: 净种间亲缘关系指数(net relatedness index, NRI)和净最近种间亲缘关系指数(nearest taxon index, NTI), 结合群落的生境类型来量度不同局域生境条件下不同径级尺度木本植物系统发育关系。结果发现: (1)未考虑物种多度加权的系统发育平均成对距离(mean pairwise distance, MPD)指数比考虑物种多度加权的MPD指数显著地高估了群落整体系统发育多样性, 且这种现象在小径级尺度(1 cm≤DBH<5 cm)最为明显。因此, 在森林监测样地中对于中、小径级群落系统发育结构研究中建议考虑物种多度信息。(2) 从群落组成整体系统发育结构来看, 尖峰岭热带山地雨林在几乎所有径级尺度和生境下均倾向于系统发育发散, 且随着径级的递增发散程度趋于明显(NRI<0)。(3)从群落组成局部系统发育结构来看, 尖峰岭热带山地雨林在中、小径级倾向于系统发育聚集(NTI>0), 而在大径级(DBH≥15 cm)则倾向于系统发育发散(NTI<0)。总之, 研究群落系统发育结构时应考虑物种多度的影响以及径级尺度效应。     

Distribution, abundance and niche breadth of birds: scale matters

We used local habitat niche breadth, local abundance and body size of non-passerine afrotropical birds in Tsavo East National Park (Kenya) to predict species distributional ranges in Kenya and across Africa. Univariate analysis revealed a significant positive correlation between local abundance and distribution only on the scale of Kenya. Performing a multiple regression analysis, local abundance, local habitat niche breadth and body size explained a significant part of the variance in bird distribution, again only on the Kenyan scale. From these results, we speculate that on continental scales distributions may be more influenced by macroclimatic conditions and historical factors, whereas distributions on regional scales are predominantly influenced by ecological factors.     

Predicting folivorous primate abundance: validation of a nutritional model

Understanding the determinants of animal abundance has become more vital as ecologists are increasingly asked to apply their knowledge to the construction of informed management plans. However, there are few general models are available to explain variation in abundance. Some notable exceptions are studies of folivorous primates, in which the protein-to-fiber ratio of foods has been shown to predict biomass. Here we examine the generality of Milton's [American Naturalist 114:363-378, 1979] protein/fiber model by providing a detailed analysis of diet selection in black-and-white colobus monkeys (Colobus guereza), and applying the model to populations shown to be stable; an assumption not previously examined. Based on observations of two groups of black-and-white colobus in Kibale National Park, Uganda, and one group in a forest fragment, we documented that the animals selected young leaves that had more protein, were more digestible, and had a higher protein-to-fiber ratio than mature leaves. The mature leaves did not differ from young leaves with respect to secondary compounds or mineral content (with the exceptions of copper and zinc). All of the colobus groups selected foods with a high protein-to-fiber ratios. However, one group also selected more digestible foods, and in another group, foraging efforts were positively related to zinc and negatively related to potassium. Previous studies that examined Milton's protein/fiber model did not demonstrate that the study populations were stable. If some populations were not at carrying capacity, then the correlations drawn between food availability and/or quality and folivore biomass may have been spurious. To address this issue, we censused a series of forest fragments in 1995 and again in 2000. We found that the populations in these fragments had declined from 165 in 1995 to 119 animals in 2000. However, based on evidence of population stability and lack of forest disturbance, we concluded that five of the original populations were stable. The biomass of these populations was related to the protein-to-fiber ratio of the fragment's trees. Combining our data with published data, we demonstrate that the protein-to-fiber ratios of mature leaves available to these folivorous primates accounted for 87% of the variance in their biomass.     

Role of spatial memory in primate foraging patterns: Saguinus mystax and Saguinus fuscicollis

From field data collected in the Amazon Basin of northeastern Peru, I present evidence that moustached (Saguinus mystax) and saddle-back (Saguinus fuscicollis) tamarins maintain detailed knowledge of the distribution and location of many tree species in their home range. During the wet season months of October through December 1984, fruits and exudates from 20 tree species and over 150 individual trees accounted for 75% of plant feeding time. These trees exhibited a patchy distribution; mean nearest-neighbor distances between trees of the same species averaged 148 meters. Moustached and saddle-back tamarins visited an average of 13 trees per day, concentrating their feeding efforts on 4–11 individual trees from a small number of target species. In 70% of all cases the nearest tree of a given species was selected as the next feeding site. Movement between these sites was characterized by relatively straight-line travel. It is argued that S. mystax and S. fuscicollis offset the patchiness component of the fruit and exudate part of their diet through goal-directed foraging and an ability to compare accurately the distances and directions from their present location to a large number of potential feeding trees.     

Bird diversity and abundance in forest fragments and Eucalyptus plantations around an Atlantic forest reserve, Brazil

Little of Brazil's remaining Atlantic forest is protected, so it is important to assess how well the region's wildlife can persist in areas/habitats outside reserves. We studied bird diversity and abundance during 546 point counts in the Sooretama/Linhares reserve, 200 point counts in 31 forest fragments (10–150 h), and 50 point counts in <30-year-old Eucalyptus plantations, within 7 km of the reserve. Only eight bird species were recorded in Eucalyptus, and this impoverishment, as compared to some Eucalyptus plantations elsewhere in Brazil may be a result of intensive clearance of understory vegetation. Species diversity in forest fragments was significantly lower than in the reserve. Twelve, mostly non-forest or edge species, were significantly commoner in the fragments, but nineteen species were frequent in the reserve but rare or absent in forest fragments. These included two Pyrrhura parakeets, a Brotogeris parakeet, a trogon Trogon, a jacamar Galbula, woodpeckers Piculus and Campephilus, Myrmotherula antwrens, and Hemithraupus and Tachyphonus tanagers. Bird species richness at points in forest fragments did not decline with fragment size, distance from the reserve, or forest quality. However, forest in fragments was more heavily degraded than forest within the reserve and poor forest quality may be the cause of declines in some species. Whilst protection of forest within reserves is a priority, management of forest fragments may aid conservation of some threatened species.     

Spatial variation in density and total size estimates in fragmented primate populations: the golden‐crowned sifaka (Propithecus tattersalli)

The golden‐crowned sifaka (Propithecus tattersalli) is an endangered lemur species found only in the Daraina region, a very restricted area in north‐eastern Madagascar. Its forest habitat is highly fragmented and expected to suffer from significant changes in the near future. The species is poorly known and only one census study, carried out in 2000, has ever been published. It is thus crucial to update the conservation status of the golden‐crowned sifaka before major anthropogenic environmental changes take place. Using the line‐transect approach, we estimated the species density in the main forest fragments located in both the peripheral and central parts of the distribution range, including both protected and unprotected areas. In parallel, we tried to determine whether an edge effect could be detected by comparing densities at different distances from the forest edges. We found important variation of sifaka densities among forest fragments. The total species abundance is thus difficult to determine, but we estimated that it is likely to be over 18,000, two to three times higher than previously thought. However, our data also suggested that most P. tattersalli live in forests located in the central part of the distribution range and that the estimated densities in the central part were high (>80 individuals/km²). Two forest fragments, found to host a large part of the total population, are currently outside the managed area and their incorporation to the managed area is strongly recommended. Lastly, as expected for a folivorous and not heavily hunted species, our results are consistent with the hypothesis that this species does not experience a clear edge effect, at least during the first half of the dry season. This could be due to a high resiliency to habitat fragmentation or to the fact that fragmentation has been going on for some time. Am. J. Primatol. 72:72–80, 2010. © 2009 Wiley‐Liss, Inc.