Relating Stomatal Conductance to Leaf Functional Traits

Leaf functional traits are important because they reflect physiological functions, such as transpiration and carbon assimilation. In particular, morphological leaf traits have the potential to summarize plants strategies in terms of water use efficiency, growth pattern and nutrient use. The leaf economics spectrum (LES) is a recognized framework in functional plant ecology and reflects a gradient of increasing specific leaf area (SLA), leaf nitrogen, phosphorus and cation content, and decreasing leaf dry matter content (LDMC) and carbon nitrogen ratio (CN). The LES describes different strategies ranging from that of short-lived leaves with high photosynthetic capacity per leaf mass to long-lived leaves with low mass-based carbon assimilation rates. However, traits that are not included in the LES might provide additional information on the species'' physiology, such as those related to stomatal control. Protocols are presented for a wide range of leaf functional traits, including traits of the LES, but also traits that are independent of the LES. In particular, a new method is introduced that relates the plants’ regulatory behavior in stomatal conductance to vapor pressure deficit. The resulting parameters of stomatal regulation can then be compared to the LES and other plant functional traits. The results show that functional leaf traits of the LES were also valid predictors for the parameters of stomatal regulation. For example, leaf carbon concentration was positively related to the vapor pressure deficit (vpd) at the point of inflection and the maximum of the conductance-vpd curve. However, traits that are not included in the LES added information in explaining parameters of stomatal control: the vpd at the point of inflection of the conductance-vpd curve was lower for species with higher stomatal density and higher stomatal index. Overall, stomata and vein traits were more powerful predictors for explaining stomatal regulation than traits used in the LES.     

A Data Base for Scaling up from the Leaf to the Canopy

A data base was generated for quantifying effects of thermal time (degree-days) on the appearance of new leaves, the expansion of such leaves to maximum area, their death, the appearance of new internodes below the node associated with such leaves, and the extension of these internodes to maximum length. The data base for a list of crop (agronomic and horticultural), weed, and native Tallgrass Prairie plants has been summarized, with equations for the above events as a function of degree days, with appropriate base temperatures and maximum cut-off temperatures, in a Java applet which is available at a website with the URL . Associated graphical plots such as shown in this paper are also given. Branching behavior was accounted for. These events predict the effect of thermal time on leaf age and its height in the plant canopy, both important factors needed for upscaling functions for leaf behavior to those for behavior of the plant canopy. The data base is evolving to include coefficients for other species. Coefficients are used to predict the leaf area index of the canopy, which is important for predicting evapotranspiration from the crop and the protection of the soil from erosion.     

Responses of Soybean Leaf Angle, Photosynthesis and Stomatal Conductance to Leaf and Soil Water Potential

The hypothesis that soil water potential (_s) is better correlatedto heliotropic leaf orientation, photosaturated photosyntheticCO₂ assimilation and stomatal conductance during periods oflimited water availability than is bulk leaf water potential(₁) was examined in greenhouse-grown soybean (Glycine max) plants,submitted to a progressive drought. Paired plants were exposedto either 1000 or 100 µmol m^–2 s^–1 photonflux densities (PFD) for 45–60 mins. The higher irradianceinduced short-term decreases in ₁, due to increased transpiration,while _l in the plant exposed to low PFD did not decrease. Thesechanges in ₁ occurred independently of changes in soil waterstatus. Concurrent to the light treatments, a single attachedleaf from each of the two plants was isolated from the restof the plant by shading, and the pulvinus of its terminal leafletwas exposed to a perpendicular PFD of 500 µmol m–²S^–1. Leaf movement of this leaflet was recorded in responseto this light, until a stable leaflet angle was achieved. Valuesof _s and _l (before and after light treatment), and photosaturatedrates of photosynthesis and stomatal conductance, were thenmeasured on these leaves. Leaflet angle and gas exchange werebetter correlated with _s (r² = 0.50, 0.50 and 0.57 for angle,photosynthesis and conductance, respectively) than with _l especiallywhen _l was the result of short-term, high-light induced changesin leaf water status (r² = 0.36, 0.32 and 0.49, for the sameparameters). Leaflet angle was also correlated with stomatalconductance (r² = 0.61) and photosynthetic rate (r² = 0.60),suggesting a close association between leaf orientation, leafmetabolism and soil water availability. Glycine max (L.) Merr. cv. Essex, soybean, heliotropism, water potential, photosynthesis, stomatal conductance, solar tracking     

Hydraulic Conductance and Stomatal Sensitivity to Changes of Leaf Water Status in Six Deciduous Tree Species

The relationship between shoot hydraulic conductance (L) and stomatal sensitivity to changes in leaf water status was studied in the saplings of six deciduous tree species. L increased significantly in sequence: Acer platanoides < Tilia Cordata < Padus avium = Quercus robur < Salix caprea = Populus tremula. L was higher in the trees grown in soil with a higher nitrogen content and lower in the trees grown under mild water stress or kept in darkness for several days. L was higher in July than in September in all the species. L correlated positively with maximum photosynthesis, stomatal conductance and stomatal sensitivity to an increase in leaf water potential, but negatively with stomatal sensitivity to a decrease in leaf water potential. The correlations between L and any other parameter were approximated by three different curves: data for water-stressed plants fit to the first, data for plants kept in darkness fit to the second and all the other data fit to the third curve. The reasons of the differences of shoot hydraulic conductance in the different experimental sets and the mechanisms which may cause the correlation between L and the other characteristics are discussed.     

Enhanced Stomatal Conductance by a Spontaneous Arabidopsis Tetraploid,Me-0, Results from Increased Stomatal Size and Greater Stomatal Aperture

The rate of gas exchange in plants is regulated mainly by stomatal size and density. Generally, higher densities of smaller stomata are advantageous for gas exchange; however, it is unclear what the effect of an extraordinary change in stomatal size might have on a plant’s gas-exchange capacity. We investigated the stomatal responses to CO₂ concentration changes among 374 Arabidopsis (Arabidopsis thaliana) ecotypes and discovered that Mechtshausen (Me-0), a natural tetraploid ecotype, has significantly larger stomata and can achieve a high stomatal conductance. We surmised that the cause of the increased stomatal conductance is tetraploidization; however, the stomatal conductance of another tetraploid accession, tetraploid Columbia (Col), was not as high as that in Me-0. One difference between these two accessions was the size of their stomatal apertures. Analyses of abscisic acid sensitivity, ion balance, and gene expression profiles suggested that physiological or genetic factors restrict the stomatal opening in tetraploid Col but not in Me-0. Our results show that Me-0 overcomes the handicap of stomatal opening that is typical for tetraploids and achieves higher stomatal conductance compared with the closely related tetraploid Col on account of larger stomatal apertures. This study provides evidence for whether larger stomatal size in tetraploids of higher plants can improve stomatal conductance.Gas exchange is a vital activity for higher plants that take up atmospheric CO₂ and release oxygen and water vapor through epidermal stomatal pores. Gas exchange affects CO₂ uptake, photosynthesis, and biomass production (Horie et al., 2006; Evans et al., 2009; Tanaka et al., 2014). Stomatal conductance (gs) is used as an indicator of gas-exchange capacity (Franks and Farquhar, 2007). Maximum stomatal conductance (gsmax) is controlled mainly by stomatal size and density, two parameters that change with environmental conditions and are negatively correlated with each other (Franks et al., 2009).Given a constant total stomatal pore area, large stomata are generally disadvantageous for gas exchange compared with smaller stomata, because the greater pore depth in larger stomata increases the distance that gas molecules diffuse through. This increased distance is inversely proportional to g_smax (Franks and Beerling, 2009). The fossil record indicates that ancient plants had small numbers of large stomata when atmospheric CO₂ levels were high, and falling atmospheric [CO₂] induced a decrease in stomatal size and an increase in stomatal density to increase g_s for maximum carbon gain (Franks and Beerling, 2009). The positive relationship between a high g_s and numerous small stomata also holds true among plants living today under various environmental conditions (Woodward et al., 2002; Galmés et al., 2007; Franks et al., 2009). Additionally, the large stomata of several plant species (e.g. Vicia faba and Arabidopsis [Arabidopsis thaliana]) are often not effective for achieving rapid changes in g_s, due to slower solute transport to drive movement caused by their lower membrane surface area-to-volume ratios (Lawson and Blatt, 2014).Stomatal size is strongly and positively correlated with genome size (Beaulieu et al., 2008; Franks et al., 2012; Lomax et al., 2014). Notably, polyploidization causes dramatic increases in nucleus size and stomatal size (Masterson, 1994; Kondorosi et al., 2000). In addition to the negative effects of large stomata on gas exchange (Franks et al., 2009), polyploids may have another disadvantage; del Pozo and Ramirez-Parra (2014) showed that artificially induced tetraploids of Arabidopsis have a reduced stomatal density (stomatal number per unit of leaf area) and a lower stomatal index (stomatal number per epidermal cell number). Moreover, tetraploids of Rangpur lime (Citrus limonia) and Arabidopsis have lower transpiration rates and changes in the expression of genes involved in abscisic acid (ABA), a phytohormone that induces stomatal closure (Allario et al., 2011; del Pozo and Ramirez-Parra, 2014). On the other hand, an increase in the ploidy level of Festuca arundinacea results in an increase in the CO₂-exchange rate (Byrne et al., 1981); hence, polyploids may not necessarily have a reduced gas-exchange capacity.Natural accessions provide a wide range of information about mechanisms for adaptation, regulation, and responses to various environmental conditions (Bouchabke et al., 2008; Brosché et al., 2010). Arabidopsis, which is distributed widely throughout the Northern Hemisphere, has great natural variation in stomatal anatomy (Woodward et al., 2002; Delgado et al., 2011). Recently, we investigated leaf temperature changes in response to [CO₂] in a large number of Arabidopsis ecotypes (374 ecotypes; Takahashi et al., 2015) and identified the Mechtshausen (Me-0) ecotype among ecotypes with low CO₂ responsiveness; Me-0 had a comparatively low leaf temperature, implying a high transpiration rate. In this study, we revealed that Me-0 had a higher g_s than the standard ecotype Columbia (Col), despite having tetraploid-dependent larger stomata. Notably, the g_s of Me-0 was also higher than that of tetraploid Col, which has stomata as large as those of Me-0. This finding resulted from Me-0 having a higher g_s-to-g_smax ratio due to more opened stomata than tetraploid Col. In addition, there were differences in ABA responsiveness, ion homeostasis, and gene expression profiles in guard cells between Me-0 and tetraploid Col, which may influence their stomatal opening. Despite the common trend of smaller stomata with higher gas-exchange capacity, the results with Me-0 confirm the theoretical possibility that larger stomata can also achieve higher stomatal conductance if pore area increases sufficiently.     

Variation in Selection for. Leaf Water Conductance in Relation to Growth and Stomatal Dimensions in Lolium perenne L.

A simple, rapid technique for direct selection for leaf waterconductance (LWC) in two populations of Lolium perenne L. isdescribed. Measurements were made with a diffusion porometerin growth rooms on the youngest fully expanded leaf of eachtiller. Considerable variation in LWC was found between 100genotypes of each population. Most of the variation in totalLWC was attributed to variation in adaxial LWC and it was shownthat ignoring abaxial LWC gave very similar ranking of genotypesto those using total LWC. Selection criteria were then establishedwhich maximised the repeatability of LWC measurements and allowedselection of groups of plants significantly different from oneanother in LWC. The variation in LWC was not related eitherto stomatal length or number, or to growth rate. Lolium perenne L., perennial ryegrass, abaxial and adaxial, leaf water conductance, selection, diurnal rhythms, ontogenetic changes, growth, stomatal dimensions     

Methanol Emission from Leaves (Enzymatic Detection of Gas-Phase Methanol and Relation of Methanol Fluxes to Stomatal Conductance and Leaf Development)

We recently reported the detection of methanol emissions from leaves (R. MacDonald, R. Fall [1993] Atmos Environ 27A: 1709-1713). This could represent a substantial flux of methanol to the atmosphere. Leaf methanol production and emission have not been investigated in detail, in part because of difficulties in sampling and analyzing methanol. In this study we used an enzymatic method to convert methanol to a fluorescent product and verified that leaves from several species emit methanol. Methanol was emitted almost exclusively from the abaxial surfaces of hypostomatous leaves but from both surfaces of amphistomatous leaves, suggesting that methanol exits leaves via stomates. The role of stomatal conductance was verified in experiments in which stomates were induced to close, resulting in reduced methanol. Free methanol was detected in bean leaf extracts, ranging from 26.8 [mu]g g-1 fresh weight in young leaves to 10.0 [mu]g g-1 fresh weight in older leaves. Methanol emission was related to leaf development, generally declining with increasing leaf age after leaf expansion; this is consistent with volatilization from a cellular pool that declines in older leaves. It is possible that leaf emission could be a major source of methanol found in the atmosphere of forests.     

Impacts of Canopy and Understory Nitrogen Additions on Stomatal Conductance and Carbon Assimilation of Dominant Tree Species in a Temperate Broadleaved Deciduous Forest

Ecosystems - Excess N deposition has aroused concerns about its negative impacts on forest ecosystems. A two-year study was conducted to assess the responses of stomatal conductance (Gc) and carbon...     

The Contribution of Leaves from Different Levels within a Tomato Crop to Canopy Net Photosynthesis: An Experimental Examination of Two Canopy Models

The rates of net photosynthesis per unit ground area by a closedcanopy of tomato plants were measured over a range of naturallight flux densities. The canopy, of leaf area index 8.6, wasdivided into three horizontal layers of equal depth. On successivedays the canopy was progressively defoliated in layers fromthe ground upwards, allowing the photosynthetic contributionfrom individual leaf layers to be determined. The uppermostlayer, 23% of the total leaf area, assimilated 66% of the netCO₂ fixed by the canopy and accounted for a similar percentageof the total leaf respiration. Net photosynthesis versus light response curves for individualleaves from different positions within the canopy were alsoobtained. Leaf conductances to CO₂ transfer and the dark respirationrates of leaves from the uppermost leaf layer were approximatelyten times those from the lowest layer. The canopy data were analysed using a simple model which assumedthat the canopy was composed of leaves with identical photosyntheticand respiratory characteristics. The model fitted the data andallowed the characteristics of an ‘idealized’ leafto be estimated. The estimated values of the leaf light utilizationefficiency, ,and the leaf conductance CO₂ transfer, , were similarto values directly determined for individual leaves in the uppermostleaf layer and the estimated rate of leaf dark respiration,R_d, corresponded to measured rates for leaves much lower inthe canopy. The simple model may be used to examine gross effectsof crop environment on the leaf photosynthetic characteristicof an ‘idealized’ leaf, but cannot be used to predictaccurately canopy net photosynthesis from the photosyntheticand respiratory characteristics of any single real leaf. A moredetailed model, developed to allow explicitly for the observedvariation in and R_d within the canopy is appropriate for thispurpose.     

Control of Photosynthesis and Stomatal Conductance in Ricinus communis L. (Castor Bean) by Leaf to Air Vapor Pressure Deficit

Castor bean (Ricinus communis L.) has a high photosynthetic capacity under high humidity and a pronounced sensitivity of photosynthesis to high water vapor pressure deficit (VPD). The sensitivity of photosynthesis to varying VPD was analyzed by measuring CO₂ assimilation, stomatal conductance (g_s), quantum yield of photosystem II (_II), and nonphotochemical quenching of chlorophyll fluorescence (q_N) under different VPD. Under both medium (1000) and high (1800 micromoles quanta per square meter per second) light intensities, CO₂ assimilation decreased as the VPD between the leaf and the air around the leaf increased. The g_s initially dropped rapidly with increasing VPD and then showed a slower decrease above a VPD of 10 to 20 millibars. Over a temperature range from 20 to 40°C, CO₂ assimilation and g_s were inhibited by high VPD (20 millibars). However, the rate of transpiration increased with increasing temperature at either low or high VPD due to an increase in g_s. The relative inhibition of photosynthesis under photorespiring (atmospheric levels of CO₂ and O₂) versus nonphotorespiring (700 microbars CO₂ and 2% O₂) conditions was greater under high VPD (30 millibars) than under low VPD (3 millibars). Also, with increasing light intensity the relative inhibition of photosynthesis by O₂ increased under high VPD, but decreased under low VPD. The effect of high VPD on photosynthesis under various conditions could not be totally accounted for by the decrease in the intercellular CO₂ in the leaf (C_i) where C_i was estimated from gas exchange measurements. However, estimates of C_i from measurements of _II and q_N suggest that the decrease in photosynthesis and increase in photorespiration under high VPD can be totally accounted for by stomatal closure and a decrease in C_i. The results also suggest that nonuniform closure of stomata may occur in well-watered plants under high VPD, causing overestimates in the calculation of C_i from gas exchange measurements. Under low VPD, 30°C, high light, and saturating CO₂, castor bean (C₃ tropical shrub) has a rate of photosynthesis (61 micromoles CO₂ per square meter per second) that is about 50% higher than that of tobacco (C₃) or maize (C₄) under the same conditions. The chlorophyll content, total soluble protein, and ribulose-1,5-bisphosphate carboxylase/oxygenase level on a leaf area basis were much higher in castor bean than in maize or tobacco, which accounts for its high rates of photosynthesis under low VPD.     

Effects of Nitrate Application on Amaranthus powellii Wats. : III. Optimal Allocation of Leaf Nitrogen for Photosynthesis and Stomatal Conductance

Optimal allocation of leaf nitrogen maximizes daily CO₂ assimilation for a given leaf nitrogen concentration. According to the hypothesis of optimization, this condition occurs when the partial derivative of assimilation rate with respect to leaf nitrogen concentration is constant. This hypothesis predicts a linear increase of assimilation rate with leaf nitrogen concentration under constant conditions. Plants of Amaranthus powellii Wats. were grown at 1, 5, 10, or 45 millimolar nitrate to obtain leaves with different nitrogen concentrations. Assimilation rate at 340 microbar CO₂/bar, stomatal conductance, CO₂- and light-saturated net photosynthetic rate, the initial slope of the CO₂ response of photosynthesis, ribulose-1,5′-bisphosphate carboxylase activity, and phosphoenolpyruvate carboxylase activity were linearly related to estimated or actual leaf nitrogen concentration. The data are consistent with the optimal use of leaf nitrogen. This hypothesis and the hypothesis of optimal stomatal conductance were combined to determine the relationship between conductance and leaf nitrogen concentration. The slope of conductance versus leaf nitrogen concentration was not significantly different than the slope predicted by the combination of the two hypotheses. Stomatal conductance was linearly related to leaf nitrogen in the field and the slope decreased with lower xylem pressure potentials in a manner consistent with the hypotheses. Finally, apparent maximum stomatal aperture of isolated abaxial epidermal strips was linearly related to leaf nitrogen suggesting stomatal conductance and assimilation rate are controlled in parallel by leaf nitrogen concentration or some factor correlated with leaf nitrogen.     

Assessment of the Response to Selection for Leaf Water Conductance in Lolium perenne

Measurements of leaf water conductance (LWC) were made in agrowth room on plants previously selected for either high orlow LWC as seedlings from two Lolium perenne L. populations.Differences in LWC were maintained between selection groupswhen measured as older plants, but there were considerable changesin LWC of individual selection groups on remeasurement. TheLWCs and the rankings of LWCs of individual genotypes were correlatedbetween experiments, thus demonstrating that selection of genotypeswas worthwhile. Thus the possibility of including LWC in selectionprogrammes was established. Investigations conducted to optimize sampling for LWC are described.It was concluded that little further reduction in the standarderror of LWC measurements was obtained by making more than eightmeasurements per genotype, and it was important to sample onat least four tillers. A new measure for the phenotypic stabilityof a selection group is proposed, named realized ‘selectivity’.The realized selectivity can be used to estimate the upper valuefor realized heritability and is about 0.5 for LWC in L. perenne.The values of phenotypic repeatability of LWC are compared withother similar measurements. Lolium perenne L, leaf water conductance, selection, components of variance, scale of measurement     

Estimation of Leaf Area Index and Plant Area Index of a Submerged Macrophyte Canopy Using Digital Photography

Non-destructive estimation using digital cameras is a common approach for estimating leaf area index (LAI) of terrestrial vegetation. However, no attempt has been made so far to develop non-destructive approaches to LAI estimation for aquatic vegetation. Using the submerged plant species Potamogeton malainus, the objective of this study was to determine whether the gap fraction derived from vertical photographs could be used to estimate LAI of aquatic vegetation. Our results suggested that upward-oriented photographs taken from beneath the water surface were more suitable for distinguishing vegetation from other objects than were downward-oriented photographs taken from above the water surface. Exposure settings had a substantial influence on the identification of vegetation in upward-oriented photographs. Automatic exposure performed nearly as well as the optimal trial exposure, making it a good choice for operational convenience. Similar to terrestrial vegetation, our results suggested that photographs taken for the purpose of distinguishing gap fraction in aquatic vegetation should be taken under diffuse light conditions. Significant logarithmic relationships were observed between the vertical gap fraction derived from upward-oriented photographs and plant area index (PAI) and LAI derived from destructive harvesting. The model we developed to depict the relationship between PAI and gap fraction was similar to the modified theoretical Poisson model, with coefficients of 1.82 and 1.90 for our model and the theoretical model, respectively. This suggests that vertical upward-oriented photographs taken from below the water surface are a feasible alternative to destructive harvesting for estimating PAI and LAI for the submerged aquatic plant Potamogeton malainus.     

Leaf Age as a Determinant in Stomatal Control of Water Loss from Cotton during Water Stress

The stomatal resistance of individual leaves of young cotton plants (Gossypium hirsutum L. var. Stoneville 213) was measured during a period of soil moisture stress under conditions of constant evaporative demand. When plants were subjected to increasing soil water stress, increases in stomatal resistance occurred first on the lower leaves and the stomata on the upper surfaces were the most sensitive to decreasing leaf-water potential. Stomatal closure proceeded from the oldest leaves to the youngest as the stress became more severe. This apparent effect of leaf age was not due to radiation differences during the stress period. Radiation adjustments on individual leaves during their development altered the stomatal closure potential for all leaves, but did not change the within-plant pattern. Our data indicate that no single value of leaf water potential will adequately represent a threshold for stomatal closure in cotton. Rather, the stomatal resistance of each leaf is uniquely related to its own water potential as modified by age and radiation regime during development. The effect of age on stress-induced stomatal closure was not associated with a loss of potassium from older leaves. Increases in both the free and bound forms of abscisic acid were observed in water-stressed plants, but the largest accumulations occurred in the youngest leaves. Thus, the pattern of abscisic acid accumulation in response to water stress did not parallel the pattern of stomatal closure induced by water stress.     

Estimating a Markovian Epidemic Model Using Household Serial Interval Data from the Early Phase of an Epidemic

The clinical serial interval of an infectious disease is the time between date of symptom onset in an index case and the date of symptom onset in one of its secondary cases. It is a quantity which is commonly collected during a pandemic and is of fundamental importance to public health policy and mathematical modelling. In this paper we present a novel method for calculating the serial interval distribution for a Markovian model of household transmission dynamics. This allows the use of Bayesian MCMC methods, with explicit evaluation of the likelihood, to fit to serial interval data and infer parameters of the underlying model. We use simulated and real data to verify the accuracy of our methodology and illustrate the importance of accounting for household size. The output of our approach can be used to produce posterior distributions of population level epidemic characteristics.     

Regulation of Photosynthesis of C3 Plants in Response to Progressive Drought: Stomatal Conductance as a Reference Parameter

We review the photosynthetic responses to drought in field-growngrapevines and other species. As in other plant species, therelationship between photosynthesis and leaf water potentialand/or relative water content in field-grown grapevines dependson conditions during plant growth and measurements. However,when light-saturated stomatal conductance was used as the referenceparameter to reflect drought intensity, a common response patternwas observed that was much less dependent on the species andconditions. Many photosynthetic parameters (e.g. electron transportrate, carboxylation efficiency, intrinsic water-use efficiency,respiration rate in the light, etc.) were also more stronglycorrelated with stomatal conductance than with water statusitself. Moreover, steady-state chlorophyll fluorescence alsoshowed a high dependency on stomatal conductance. This is discussedin terms of an integrated down-regulation of the whole photosyntheticprocess by CO₂ availability in the mesophyll. A study with sixMediterranean shrubs revealed that, in spite of some markedinterspecific differences, all followed the same pattern ofdependence of photosynthetic processes on stomatal conductance,and this pattern was quite similar to that of grapevines. Furtheranalysis of the available literature suggests that the above-mentionedpattern is general for C₃ plants. Even though the patterns describeddo not necessarily imply a cause and effect relationship, theycan help our understanding of the apparent contradictions concerningstomatal vs. non-stomatal limitations to photosynthesis underdrought. The significance of these findings for the improvementof water-use efficiency of crops is discussed.     

Bayesian Hierarchical Model for Estimating Gene Expression Intensity Using Multiple Scanned Microarrays

We propose a method for improving the quality of signal from DNA microarrays by using several scans at varying scanner sen-sitivities. A Bayesian latent intensity model is introduced for the analysis of such data. The method improves the accuracy at which expressions can be measured in all ranges and extends the dynamic range of measured gene expression at the high end. Our method is generic and can be applied to data from any organism, for imaging with any scanner that allows varying the laser power, and for extraction with any image analysis software. Results from a self-self hybridization data set illustrate an improved precision in the estimation of the expression of genes compared to what can be achieved by applying standard methods and using only a single scan.     

Using a Crop Growth Model to Quantify Regional Biogas Potentials: an Example of the Model Region Biberach (South-West Germany)

Over the last decade, political framework conditions in the energy sector provoked a strong focus on biogas production in Germany. In this context, a sufficient and secure regional biomass supply is needed in order to run biogas plants economically. It is important to estimate which biomass amounts can be produced and are available for bioenergy production in a defined region. The present study focused on a model-based approach quantifying the biomass and, from this, the resulting biogas potential of the model region of Biberach (south-west Germany) using the process-oriented crop growth model DSSAT 4.0. Considering the regional soil and climate conditions of the model region, dry matter yields of maize, triticale, and a crop rotation system (CRS) of maize and triticale including different management systems (change in sowing and harvest date) were simulated. The results indicated an adequate model fit between simulated and measured yields. Dry matter yields of maize (14.7 t ha^?1), triticale (12.7 t ha^?1), and the CRS (18.1–19.2 t ha^?1) differed significantly, indicating that the chosen CRS provided the highest dry matter yields. The biomass potential of all crops was simulated considering different bioenergy scenarios depending on the available agricultural land used for bioenergy. The highest biomass potential was provided by the management system consisting of maize and triticale sown on 1 May and 15 October, respectively. Finally, an additional energy potential of 45,000 kW_el (bioenergy scenario 50/50 % of the agricultural land used for biogas production) and of 5,700 kW_el (bioenergy scenario 25/25 % of the agricultural land used for biogas production) was determined for the county of Biberach by implementing a CRS, which consisted of maize and triticale. It could be concluded that an additional biomass potential for biogas production exists in the county. Suitable areas for the location of biogas plants could be identified based on the available biomass potential.     

Temperature and CO2Responses of Leaf and Canopy Photosynthesis: a Clarification using the Non-rectangular Hyperbola Model of Photosynthesis

The responses of C₃leaf and canopy gross photosynthesis to increasingtemperature and CO₂can be readily understood in terms of thetemperature and CO₂dependencies of quantum yield (