The Benthic Impacts of the Loch Linnhe Artificial Reef

Artificial reefs are man-made structures that are placed on the seabed to mimic natural reefs. The Loch Linnhe Artificial Reef will consist of up to 40 reef modules, when completed, each constructed using concrete blocks. As part of this complex, reef modules of approximately 200 tonnes were deployed in June 2001 and January 2002 and form the basis of this study. Sediment samples were taken adjacent to- and 5 m from the reef perimeters and characterised in terms of sediment oxygenation (redox), particle size, organic carbon (loss on ignition) and coarseness (material >1 mm and <5 mm). Changes in molluscs and ophiuroids (>1 mm) present in the sediment were linked to chemico-physical changes occurring as a consequence of the reef. Both reefs trapped macroalgal phytodetritus at the perimeters, which subsequently decomposed. This accumulated material isolated the seabed from the overlying water column and was associated with a decrease in sediment oxygenation that was linked to changes in community structure. LOI was significantly higher around one reef compared with 5 m from that reef. The reefs did not cause significant changes in the sediment texture (median particle size or coarseness) and neither LOI nor sedimentary texture changes were associated with community change.     

Dynamics of Fish Colonization of an Experimental Artificial Reef in Peter the Great Bay,Sea of Japan

An experimental artificial reef (AR) was built in Peter the Great Bay (Sea of Japan) to compensate for the biotope of Zostera destroyed by sea urchins. After eight years, the number of fish species on the AR increased from 5 to 18 and the fish biomass increased from 3.07 up to 37.1 g/m². Nonmigrating species (Opisthocentrus, young-of-the-year rockfishes, elegant sculpin) formed the bulk of the population; and migrant species (flounders, frog and great sculpins, sea raven) made up the greater portion of the biomass (up to 34 g/m²). Cage reefs are recommended to compensate for destroyed habitats, particularly Zostera beds.Original Russian Text Copyright ¢ 2005 by Biologiya Morya, Markevich.     

Aspects of winter primary production in the upstream section of Saguenay Fjord

From August 1985 to May 1986, experiments on primary production were carried out bi-weekly in the superficial waters (1–10 m) at one representative station (maximum depth of 260 m) located at the head of the Saguenay Fjord. During the winter season (January–March), the microalgal cells are abundant but their productivity is low. At the beginning of the snow-ice cover (January) the cells are mainly concentrated in the ice-cover interface and in the surface waters whereas in February–March, the cells are much more abundant in the ice. Results showed that the physico-chemical conditions are unfavourable for high productivity. The quantity and the quality of light under the ice cover are not the only factors limiting the photosynthetic activity of epontic community. The ice interior and epontic communities during the winter are mostly composed of the two euryhaline speciesAsterionella formosa andTabellaria fenestrata.     

Biomass, production and heterotrophic activity of bacterioplankton in the Great Astrolabe Reef lagoon (Fiji)

 Biomass, production and heterotrophic activity of bacterioplankton were determined for two weeks in the Great Astrolabe Reef lagoon, Fiji. Bacterial and Bacterial activities were distributed homogeneously throughout the water column (20 to 40 m deep) and varied little from site to site inside the lagoon. Bacterioplankton biomass and production also varied little over a diel period with coefficients of variation of 9 and 22%, respectively. On average, over the whole study, bacterial abundance was 0.77×10⁹ cells l^-1 and bacterial production averaged 0.36 μg-at. C l^-1 d^-1. Bacterial abundance and production were greater in the lagoon than in oceanic waters. Attachment to particles seems to provide an advantage for bacterioplankton growth because specific growth rates for attached bacterioplankton were, on average, significantly greater than that of the free community. Growth efficiency, determined by correlating the net increase of bacterial biomass and the net decrease of dissolved organic carbon (DOC) in dilution cultures, was very low (average 6.6%). Using carbon growth efficiency and bacterial production rates, heterotrophic activity was estimated to average 5.4 μg-at. C l^-1 d^-1. The turn-over rate of DOC (average 114 μg-at. C l^-1) due to bacterial consumption was estimated to be 0.048 d^-1 during the period of study. Accepted: 25 July 1998     

Artificial destratification of a small tropical reservoir: effects upon the phytoplankton

Seasonal changes in the phytoplankton community of a small tropical reservoir were monitored over a four year period comprising of an initial two seasonal cycles during which the water column stratified strongly for extended periods each year, and two further seasonal cycles after installation of a mechanical aeration system to induce artificial destratification. In the unmanaged reservoir, the concentration of chlorophyll a at 0.5 m reached maximum values (on one occasion > 90 mg m⁻³) when the water column was stratified and the epilimnion was very shallow (ca 2 m depth). The hypolimnion at this time was anoxic (less than 2% oxygen saturation) and had a high concentration of bacteriochlorophyll (100–200 mg m⁻³). The phytoplankton community of the unmanaged reservoir was generally dominated by cyanobacteria (Cylindrospermopsis raciborskii, Anabaena tenericaulis) during the warmer months of the year (November–March) (but replaced by chlorophyta, dinophyceae and euglenophyceae after periods of intense rain) and by bacillariophyceae (Synedra ulna var. chaseana, S. tenera) during the cooler, dry months. In the artificially destratified reservoir (8 h aeration day⁻¹), the phytoplankton community was largely dominated by diatoms except after depletion of the silica content of the water column which caused diatoms to be replaced by cyanobacteria (dominated by A. tenericaulis) and a range of chlorophytes. The changing pattern of stratification and circulation of the water column in the unmanaged reservoir caused repeated disruption of the established phytoplankton assemblage with peaks of high biomass associated with transient cyanobacterial blooms. Continuous aeration and the consequent increase in the ratio mixed: euphotic depth provided conditions suitable for dominance of the phytoplankton by diatoms, as long as silica was available, and resulted in average chlorophyll levels higher than in the unmanaged reservoir (120 ± 10 v. 64 ± 9 mg m⁻²). Hierarchical fusion analysis based on the biomass of species differentiated the phytoplankton samples into cluster groups that could be related primarily to stratification or mixing of the water column.     

Using Fish Population Metrics to Compare the Effects of Artificial Reef Density

Artificial reefs continue to be added as habitat throughout the world, yet questions remain about how reef design affects fish diversity and abundance. In the present study, the effects of reef density were assessed for fish communities and sizes of economically valuable Lutjanus campechanus 13 km off Port Mansfield, Texas, at a reef composed of more than 4000 concrete culverts. The study spanned from May to June in 2013 and 2014, and sites sampled included natural reefs, bare areas, and varying culvert patch density categories, ranging from 1–190 culverts. Abundances of adults and species evenness of juvenile populations differed between the years. Fish communities did not significantly differ among density categories; however, highest species richness and total abundances were observed at intermediate culvert densities and at natural reefs. Whereas the abundance of L. campechanus did not differ among density categories, mean total lengths of L. campechanus were greatest at the lower density. Our findings suggest that reefs should be deployed with intermediate patch density of 71–120 culverts in a 30-m radius to yield the highest fish abundances.     

The Effect of Artificial Destratification on Phytoplankton in a Reservoir

The effects of artificial destratification on limnological conditions and on phytoplankton were surveyed for 6 years (1995-2000) in Lake Dalbang (South Korea), a water supply reservoir receiving nutrients from agricultural non-point sources. In order to reduce odor problems caused by cyanobacterial blooms, six aerators were installed in 1996 and operated regularly during the warm season. Aeration destratified the water column of the reservoir and produced homogeneous physical and chemical parameters. The maximum surface temperature in summer decreased from 28.9 °C before aeration to 20.0-26.4 °C after aeration, whereas the maximum hypolimnetic temperature increased from 8.0 to 17.0-23.7 °C. Despite these changes, surface water concentrations of total phosphorus (TP) and chlorophyll a(CHLA) and their seasonal patterns did not change with destratification. Phosphorus loading was concentrated in heavy rain events during the summer monsoon, and TP and CHLA reached maximal concentrations in late summer after the monsoon. Because the hypolimnion was never anoxic prior to aeration, internal loading did not seem to be substantial. Cyanobacteria were the dominant phytoplankton in summer before aeration, but diatoms replaced them after operation of the aerator. Cyanobacteria blooms were eliminated. In contrast, total algal biomass in the water column (as CHLA integrated over depth) increased from 190 mg m^–2 in 1995 to 1150, 300, 170, and 355 mg m^–2 in 1997, 1998, 1999, and 2000, respectively. The increased ratio of mixing depth to euphotic depth to 2.5 may have resulted in a net reduction in the amount of underwater irradiance experienced by phytoplankton cells, and this may have favored the switch to diatom dominance. Furthermore, the mixing may have allowed diatoms to flourish in summer by lowering their settling loss that would be critical in stratified water columns. In conclusion, the destratification in this reservoir was effective in preventing cyanobacteria blooms, but not in reducing the total algal standing crop.     

可转化人工染色体文库的构建与鉴定

随着人类和植物基因组计划的实施,能容纳大片段的人工染色体载体发展迅速。而用YAC、BAC和PAC等基因组文库进行目的基因的筛选,在获得候选克隆后,通常要进行亚克隆,然后对每个亚克隆逐一进行基因功能互补试验,不仅工作量大,而且有遗漏目的基因的危险。TAC载体含P1质粒和Ri质粒的复制子,可直接转化植物,大大加速了工作进程。概括性的叙述了TAC载体的发展,TAC文库构建的程序及文库鉴定的问题。     

果茶人工群落的生态效应及经济效益评价

果茶人工群落的生态效应及经济效益评价魏国雄（贵州省茶叶研究所,潭５６４１００）ＥｓｔｉｍａｔｉｏｎｏｆＥｃｏｌｏｇｉｃａｌＥｆｆｅｃｔａｎｄＥｃｏｎｏｍｉｃＢｅｎｅｆｉｔｏｆＡｒｔｉｆｉｃｉａｌＴｅａ－ＦｒｕｉｔＣｏｍｍｕｎｉｔｙ．￥ＷｅｉＧｕｏｘｉ...     

细菌人工染色体基因组文库构建方法的改进

目的:建立一种改进的更简便、易操作的细菌人工染色体(BAC)文库构建方法。方法:在构建猪霍乱沙门氏菌基因组大片段DNA的BAC文库时,对改进的基因组BAC文库构建方法和常规的BAC文库构建方法进行比较。结果:利用改进的方法可简便快速地构建猪霍乱沙门氏菌基因组BAC文库。结论:使用2种方法构建BAC文库,其转化效率,以及在BAC克隆中插入的DNA片段的大小和BAC克隆的稳定性等都相同,从而表明改进的方法更简单、更方便,它能使BAC文库的构建更为高效。     

Ecological interactions between Nile tilapia (Oreochromis niloticus, L.) and the phytoplanktonic community of the Furnas Reservoir (Brazil)

1. Exotic invasive species modify natural food webs in a way frequently hard to predict. In several aquatic environments in Brazil the introduction of Oreochromis niloticus (tilapia) was followed by changes in water quality. Yet, because of its rapid and easy growth, this fish has been used in many aquaculture programmes around the country. 2. To measure the effects of tilapia on the phytoplankton community and on water conditions of a large tropical reservoir in south‐eastern Brazil (Furnas Reservoir), we performed two in situ experiments using three controls (no fish) and three tilapia enclosures (high fish density). Abiotic and biotic parameters were measured at 4 day intervals for 28 days. 3. Fish presence increased nitrogen (N) and phosphorus (P) availability (ammonium 260 and 70% mean increase – first and second experiment; and total phosphorus 540 and 270% mean increase) via excretion. Nutrient recycling by fish can thus be significant in the nutrient dynamics of the reservoir. The higher chlorophyll a concentration in the experimental fish tanks (86 and 34 μg L^?1, first and second experiment, respectively) was the result of a positive bottom‐up effect on the phytoplankton community (approximately 2 μg L^?1 in the reservoir and control tank). 4. Because tilapia feed selectively on large algae (mainly cyanobacteria and diatoms), several small‐sized or mucilaginous colonial chlorophyceans proliferated at the end of the experiments. Thus, the trophic cascade revealed strong influences on algal composition as well as on biomass. 5. Tilapia can contribute to the eutrophication of a waterbody by both top‐down and bottom‐up forces. In particular, by supplying considerable amount of nutrients it promotes the increase of fast growing algae. Tilapia must be used cautiously in aquaculture to avoid unexpected environmental degradation.     

细菌人工染色体文库的构建及应用

细菌人工染色体（BAC）是第二代大片段DNA的克隆载体系统,具有容量大、嵌合率低、遗传特性稳定、转化效率高、插入片段易回收、操作简便等优点,因而被广泛应用于基因组较大的真核生物基因组研究中,并发挥着前所未有的重要作用。本文综述了BAC的发展,利用此载体构建基因组文库的程序和鉴定方法,及其在物理图谱构建、图位克隆、基因组测序、转基因技术等研究中的应用。     

Controlling the Growth of Microcystis Using Surged Artificial Aeration

This paper investigates the effect of lake mixing, due to artificial hypolimnetic aeration, on the succession and ecological composition of selected phytoplankton species in Tegeler See, Berlin. Special attention is given to Microcystis, a nuisance bloom-forming blue-green algae and its competitor (in this lake) Ceratium, a dinoflagellate. Due to the installation configuration, the aerators frequently destratified the lake, especially when the stratification was weak. Five years representing three different operating schemes of the 15 aerators (continuous aeration, non-aeration and surge aeration) in this lake were used to determine possible aeration strategies in controlling Microsystis. In order to ease correlation of the mixing status in the lake with its yearly successions of phytoplankton growth a non-dimensional parameter called the Lake number was utilised. This parameter represents a balance between: i) forcing due to wind and aerator discharge and ii) potential energy acquired from the stratification of the lake. The results indicate that surged operation of the aerators is effective in suppressing massive growth of Microcystis. Due to their ability to adapt to the mixing/stability state of the water column, prolonged aeration or prolonged stable stratified conditions have little effect in controlling this algae.     

尖吻蝮仔蛇的人工模拟生态养殖试验

目的通过建立一个适应于尖吻蝮仔蛇生长发育的稳定的多功能生态系统的人工模拟生态养殖蛇场,以最大限度地降低仔蛇的饲料成本,从而达到降低人工养殖尖吻蝮蛇的成本。方法选取一个室外围墙式养蛇场作为试验基地。设计为适应于蛇、蛙、昆虫、蚯蚓、小杂鱼等动物生长繁衍的人工模拟生态环境,建立一个稳定的多功能蛇场生态系统,以尖吻蝮蛇100条,在试验以前随机抽取10条测量其体重和体长,并以活体动物饲料喂养法和科学饲养管理法进行试验养殖,并在进入第一、第二次冬眠前均随机抽取10条蛇仔测其体重和体长。结果本次试验与本蛇场室内人工饲养尖吻蝮仔蛇相比,不仅在体重、体长和肥满度方面均相差不大,而且仔蛇的存活率还有所提高。结论表明该人工模拟生态养殖蛇场能够满足尖吻蝮仔蛇生长发育的需要,达到了预期的目的。     

基因组细菌人工染色体文库(BAC)的构建及应用

细菌人工染色体 (BAC)是一种承载DNA大片段的克隆载体系统 ,用于人、动物和植物基因组文库构建。BAC具有插入片断大、嵌合率低、遗传稳定性好、易于操作等优点。BAC文库的构建是基因组较大的真核生物基因组学研究的重要基础 ,可用于真核生物重要基因及全基因组物理作图、重要性状基因的图位克隆、基因结构及功能分析。本文主要综述了细菌人工染色体的构建与其鉴定 ,及其在物理图谱构建、图位克隆、转基因技术等研究上的应用。     

The phytoplankton of the internal Gulf of Olbia (North-East Sardinia) between July 1992 and July 1993

Abstract

The density variations and phytoplankton structure of the internal Gulf of Olbia (north-east Sardinia) from July 1992 to July 1993 are described.

The most important class was the Bacillariophyceae, because it accounted for the maximum values and because it dominated over about one-third of the study cycle. The picoplankton was present practically all the year round with the greatest development from September to March. Prymnesiophyceae, Dinophyceae, Cyanophyceae and Euglenophyceae were found more numerously in summer and autumn 1992 than in the rest of the year, while Bacillariophyceae, Chlorophyceae and Chrysophyceae were mostly found in spring and summer 1993.

Among the 16 species that expressed the highest mean yearly density values (greater than 1×10⁴ cell I^-1), 10 were Bacillariophyceae, 2 Dinophyceae, 3 Chrysophyceae and 1 Chlorophycea. The Bacillariophyceae have also been the dominant class in floristic terms (49 taxa on 95 total), followed by the Dinophyceae (26), the Chlorophyceae (5), the Chrysophyceae (5), the Prymnesiophyceae (4), the Prasinophyceae (2), the Euglenophyceae (2) and the Cyanophyceae (2).     

Nutritional value of detritus and algae in blenny territories on the Great Barrier Reef

The salariin blenny, Salarias patzneri, primarily ingests detrital aggregates and inorganic sediment, with small quantities of filamentous algae. Samples of particulate matter <125 μm and filamentous algae were collected from the territories of S. patzneri and the nutritional value of these resources assessed using organic content and protein/energy ratios calculated from protein, carbohydrate and lipid content. Samples were collected throughout the day, during both summer and winter, to enable temporal comparisons of nutritional value. The particulates <125 μm, which were predominantly amorphic detritus, accounted for 41±2% and 44±3% of the organic matter in the epilithic algal matrix (EAM) during the summer and winter, respectively, whilst filamentous algae accounted for 37±3% and 41±3% of the organic matter in the summer and winter, respectively. Carbohydrate and lipid concentration in the algal samples was significantly greater than in particulate matter <125 μm, although no significant difference was detected in protein levels of algal samples and particulates <125 μm. Consequently, the protein/energy ratio of particulates <125 μm in the summer (11±1 mg kJ⁻¹) and winter (10±1 mg kJ⁻¹) was similar to that of filamentous algae in the summer (9±1 mg kJ⁻¹) and winter (8±1 mg kJ⁻¹). These results suggest detrital aggregates are at least comparable to filamentous algae as a nutritional resource. The large contribution of high quality detritus to organic matter in the epilithic algal matrix collected from S. patzneri territories throughout the day and between seasons provides strong evidence that detritus is a valuable component of small territorial fish diets and is an integral part of coral reef food webs.     

The phytoplankton of S'Ena Arrubia Lagoon (Centre-Western Sardinia) between 1990 and 1995

Abstract

The phytoplankton study on the S'Ena Arrubia Lagoon started in 1990, after dystrophic events, leading to high fish mortality and consequently great economic losses. This study presents a general picture of the conditions of the lagoon between 1990 and 1995, and reports on the quali-quantitative changes in the phytoplanktonic populations, as well as the trends of temperature, salinity, pH, dissolved oxygen, algal nutrients and chlorophyll a. The lagoon was characterized by great changes in salinity between years and within the same year, by high nutrient contents and by a phytoplankton trend characterized by sudden intense blooms mostly due to the Chlorophyceae and the Bacillariophyceae. The number of species found, decreased from 1990 to 1994, followed by a slight increase in 1995. The same trend was also found for total density and chlorophyll a.