The effect of interocular phase difference on perceived contrast

Binocular vision is traditionally treated as two processes: the fusion of similar images, and the interocular suppression of dissimilar images (e.g. binocular rivalry). Recent work has demonstrated that interocular suppression is phase-insensitive, whereas binocular summation occurs only when stimuli are in phase. But how do these processes affect our perception of binocular contrast? We measured perceived contrast using a matching paradigm for a wide range of interocular phase offsets (0–180°) and matching contrasts (2–32%). Our results revealed a complex interaction between contrast and interocular phase. At low contrasts, perceived contrast reduced monotonically with increasing phase offset, by up to a factor of 1.6. At higher contrasts the pattern was non-monotonic: perceived contrast was veridical for in-phase and antiphase conditions, and monocular presentation, but increased a little at intermediate phase angles. These findings challenge a recent model in which contrast perception is phase-invariant. The results were predicted by a binocular contrast gain control model. The model involves monocular gain controls with interocular suppression from positive and negative phase channels, followed by summation across eyes and then across space. Importantly, this model—applied to conditions with vertical disparity—has only a single (zero) disparity channel and embodies both fusion and suppression processes within a single framework.     

The effect of spatial structure on adaptation in Escherichia coli

Populations of organisms are generally organized in a given spatial structure. However, the vast majority of population genetic studies are based on populations in which every individual competes globally. Here we use experimental evolution in Escherichia coli to directly test a recently made prediction that spatial structure slows down adaptation and that this cost increases with the mutation rate. This was studied by comparing populations of different mutation rates adapting to a liquid (unstructured) medium with populations that evolved in a Petri dish on solid (structured) medium. We find that mutators adapt faster to both environments and that adaptation is slower if there is spatial structure. We observed no significant difference in the cost of structure between mutator and wild-type populations, which suggests that clonal interference is intense in both genetic backgrounds.     

Changes in perceived contrast of suprathreshold gratings as a function of orientation and spatial frequency

Orientation anisotropy for suprathreshold gratings of different spatial frequencies was measured using a contrast matching procedure. Observers matched the contrast of sine-wave gratings of various orientations to a vertical reference grating set at different reference contrasts. At threshold, the size of the anisotropy increased with spatial frequency, confirming previous results. When the reference grating contrast was set above threshold, the anisotropy declined, and eventually disappeared for gratings of medium spatial frequencies. At higher spatial frequencies, although the relative anisotropy became smaller, it did not disappear within the range of contrasts used in this study. For medium, but not for high spatial frequencies, the data are consistent with Kulikowski's (1976) model of effective contrast constancy.     

Motion adaptation distorts perceived visual position

After an observer adapts to a moving stimulus, texture within a stationary stimulus is perceived to drift in the opposite direction-the traditional motion aftereffect (MAE). It has recently been shown that the perceived position of objects can be markedly influenced by motion adaptation. In the present study, we examine the selectivity of positional shifts resulting from motion adaptation to stimulus attributes such as velocity, relative contrast, and relative spatial frequency. In addition, we ask whether spatial position can be modified in the absence of perceived motion. Results show that when adapting and test stimuli have collinear carrier gratings, the global position of the object shows a substantial shift in the direction of the illusory motion. When the carrier gratings of the adapting and test stimuli are orthogonal (a configuration in which no MAE is experienced), a global positional shift of similar magnitude is found. The illusory positional shift was found to be immune to changes in spatial frequency and to contrast between adapting and test stimuli-manipulations that dramatically reduce the magnitude of the traditional MAE. The lack of sensitivity for stimulus characteristics other than direction of motion suggests that a specialized population of cortical neurones, which are insensitive to changes in a number of rudimentary visual attributes, may modulate positional representation in lower cortical areas.     

The detection of spatial discontinuities: interactions between contrast and spatial contiguity

Thresholds were measured for the detection of spatial discontinuities (notches and bumps) along luminance boundaries. At high contrasts of the boundary, thresholds expressed in terms of the spatial notch/bump height fell well inside the hyperacuity range. Expressed as luminance increment thresholds between adjacent photoreceptors, the same thresholds were similar to those previously reported by Hartridge and by Hecht and Mintz for the detection of a single line. The ability of observers to detect differences in the height of a boundary on either side of a mean luminance gap was also investigated, and the effect of the gap was found to depend upon stimulus contrast. At high contrasts the introduction of a gap increased thresholds, but at the lowest contrasts, thresholds were unaffected by a gap. The role of different spatial frequency and orientational mechanisms in vernier acuity is discussed.     

The effect of spatial scale on evenness

Abstract. The effect of spatial scale on species evenness has not previously been investigated. As the area of each sample of vegetation (i.e. the spatial grain) increases, evenness could in theory increase, decrease, or stay the same, though the simplest model predicts an increase. We use biomass data from four dune slack sites and two semi-arid grasslands, sampled to allow calculation of evenness at a range of spatial grains. In all six sites, evenness decreases as grain size increases, almost monotonically. It is hypothesized that such a pattern is a result of a general feature of plant species abundance distributions and of vegetation response to environmental microheterogeneity.     

Contrast adaptation may enhance contrast discrimination

Whether contrast adaptation may enhance contrast discrimination is a question that has remained largely unresolved because of conflicting empirical evidence. Greenlee and Heitger (1988), for example, reported that contrast discrimination may be enhanced after contrast adaptation, while Maattanen and Koenderink (1991) did not. This paper aimed to account for the different conclusions reached by these independent researchers by manipulations of key differences that exist between the two studies. It is shown that contrast discrimination may be enhanced after adaptation, but that these effects can vary markedly across subjects and test conditions. Enhancements in contrast discrimination are reported to be significant when adapting and testing at low levels of contrast, but just significant at higher levels of contrast. For high contrast signals; enhancements are shown to be independent of temporal frequency but dependent upon viewing conditions. Under binocular viewing conditions, enhancements in contrast discrimination thresholds are shown to be significantly higher than under monocular viewing conditions. It is suggested that the different conclusions reached by Greenlee and Heitger and by Maattanen and Koenderink may be explained by their respective differences in viewing conditions. The former study used binocular, while the latter study used monocular viewing with an occluding eyepatch.     

The effect of neural adaptation on population coding accuracy

Most neurons in the primary visual cortex initially respond vigorously when a preferred stimulus is presented, but adapt as stimulation continues. The functional consequences of adaptation are unclear. Typically a reduction of firing rate would reduce single neuron accuracy as less spikes are available for decoding, but it has been suggested that on the population level, adaptation increases coding accuracy. This question requires careful analysis as adaptation not only changes the firing rates of neurons, but also the neural variability and correlations between neurons, which affect coding accuracy as well. We calculate the coding accuracy using a computational model that implements two forms of adaptation: spike frequency adaptation and synaptic adaptation in the form of short-term synaptic plasticity. We find that the net effect of adaptation is subtle and heterogeneous. Depending on adaptation mechanism and test stimulus, adaptation can either increase or decrease coding accuracy. We discuss the neurophysiological and psychophysical implications of the findings and relate it to published experimental data.     

The spatial scale of local adaptation in a stochastic environment

The distribution of phenotypes in space will be a compromise between adaptive plasticity and local adaptation increasing the fit of phenotypes to local conditions and gene flow reducing that fit. Theoretical models on the evolution of quantitative characters on spatially explicit landscapes have only considered scenarios where optimum trait values change as deterministic functions of space. Here, these models are extended to include stochastic spatially autocorrelated aspects to the environment, and consequently the optimal phenotype. Under these conditions, the regression of phenotype on the environmental variable becomes steeper as the spatial scale on which populations are sampled becomes larger. Under certain deterministic models – such as linear clines – the regression is constant. The way in which the regression changes with spatial scale is informative about the degree of phenotypic plasticity, the relative scale of effective gene flow and the environmental dependency of selection. Connections to temporal models are discussed.     

The effect of fetch on periphyton spatial variation

The marked spatial variation in periphyton could reflect differences in exposure, grazing or substratum. To determine if any of these factors was significant, I studied the relationship between the degree of exposure to waves (measured as fetch), grazing intensity (measured as invertebrate biomass) and spatial variation in periphyton biomass in sites of similar substratum along an island in the central mesotrophic basin of Lake Memphremagog (Québec). In spring, there was a positive relationship between fetch and periphyton biomass both on stones and on artificial substrata. This effect was especially strong for diatoms, for algae between 100–1000 µm³, for planktonic forms and for filamentous and long-stalked species. In spring, water renewal encouraged growth of these forms, but the effect disappeared in summer, coincident with silica depletion. Grazers, which were not important in the spatial variation observed in spring, probably contributed to the sudden decline of periphyton in the exposed sites in summer. Observations in nearby lakes indicate that these patterns may be general.Contribution of the Lake Memphremagog Project, Limnology Research Centre.     

Measurement of visual channels by contrast adaptation.

Inspection of a high-contrast grating pattern affects our ability to detect patterns that are similar. This technique can be used to infer the underlying mechanisms of the visual system. By using this technique, measurements of the bandwidth of orientation channels are taken for different levels of adapting contrast and adapting duration. If the threshold elevation is plotted as the difference between the unadapted and adapted threshold in decibels, then the orientation bandwidth is invariant if taken at some fraction of the maximum elevation. This results from the fact that, as the orientation difference between the adapting and test patterns increases, the function relating threshold elevation to adapting contrast reduces in slope. These data contradict the often-used 'equivalent contrast transformation' (in which the fall off in the adaptation effect with respect to orientation is expressed in terms of an equivalent reduction in adapting contrast) as this would produce quite different bandwidths at different adapting contrasts. The data also address the issue of the neuronal mechanisms of adaptation.     

The role of motor learning in spatial adaptation near a tool

Some visual-tactile (bimodal) cells have visual receptive fields (vRFs) that overlap and extend moderately beyond the skin of the hand. Neurophysiological evidence suggests, however, that a vRF will grow to encompass a hand-held tool following active tool use but not after passive holding. Why does active tool use, and not passive holding, lead to spatial adaptation near a tool? We asked whether spatial adaptation could be the result of motor or visual experience with the tool, and we distinguished between these alternatives by isolating motor from visual experience with the tool. Participants learned to use a novel, weighted tool. The active training group received both motor and visual experience with the tool, the passive training group received visual experience with the tool, but no motor experience, and finally, a no-training control group received neither visual nor motor experience using the tool. After training, we used a cueing paradigm to measure how quickly participants detected targets, varying whether the tool was placed near or far from the target display. Only the active training group detected targets more quickly when the tool was placed near, rather than far, from the target display. This effect of tool location was not present for either the passive-training or control groups. These results suggest that motor learning influences how visual space around the tool is represented.     

The effect of deleterious alleles on adaptation in asexual populations

We calculate the fixation probability of a beneficial allele that arises as the result of a unique mutation in an asexual population that is subject to recurrent deleterious mutation at rate U. Our analysis is an extension of previous works, which make a biologically restrictive assumption that selection against deleterious alleles is stronger than that on the beneficial allele of interest. We show that when selection against deleterious alleles is weak, beneficial alleles that confer a selective advantage that is small relative to U have greatly reduced probabilities of fixation. We discuss the consequences of this effect for the distribution of effects of alleles fixed during adaptation. We show that a selective sweep will increase the fixation probabilities of other beneficial mutations arising during some short interval afterward. We use the calculated fixation probabilities to estimate the expected rate of fitness improvement in an asexual population when beneficial alleles arise continually at some low rate proportional to U. We estimate the rate of mutation that is optimal in the sense that it maximizes this rate of fitness improvement. Again, this analysis relaxes the assumption made previously that selection against deleterious alleles is stronger than on beneficial alleles.     

Interfering waves of adaptation promote spatial mixing

A fundamental problem of asexual adaptation is that beneficial substitutions are not efficiently accumulated in large populations: Beneficial mutations often go extinct because they compete with one another in going to fixation. It has been argued that such clonal interference may have led to the evolution of sex and recombination in well-mixed populations. Here, we study clonal interference, and mechanisms of its mitigation, in an evolutionary model of spatially structured populations with uniform selection pressure. Clonal interference is much more prevalent with spatial structure than without, due to the slow wave-like spread of beneficial mutations through space. We find that the adaptation speed of asexuals saturates when the linear habitat size exceeds a characteristic interference length, which becomes shorter with smaller migration and larger mutation rate. The limiting speed is proportional to μ(1/2) and μ(1/3) in linear and planar habitats, respectively, where the mutational supply μ is the product of mutation rate and local population density. This scaling and the existence of a speed limit should be amenable to experimental tests as they fall far below predicted adaptation speeds for well-mixed populations (that scale as the logarithm of population size). Finally, we show that not only recombination, but also long-range migration is a highly efficient mechanism of relaxing clonal competition in structured populations. Our conservative estimates of the interference length predict prevalent clonal interference in microbial colonies and biofilms, so clonal competition should be a strong driver of both genetic and spatial mixing in those contexts.     

The effect of cooling the tongue on the perceived intensity of taste

Two experiments were performed (i) to measure the effect ofcooling on the perceived intensity of taste, and (ii) to determinewhether the temperature of the tongue or the temperature ofthe solution was primarily responsible for the changes in perceivedintensity that were observed. The first experiment revealedthat cooling both the tongue and the taste solutions from 36to either 28 or 20°C produced measurable reductions in theperceived intensity of the sweetness of sucrose and the bitternessof caffeine. The saltiness of NaCl and the sourness of citricacid were unaffected by cooling. The second experiment demonstratedthat the temperature of the tongue was the critical factor forproducing the effects on sweetness and bitterness. The latterfinding implies that some of the inconsistencies in the literatureon taste–temperature interactions might have been avoidedif the temperature of the tongue had been routinely controlled.In addition, the importance of lingual temperature suggeststhat thermal effects on taste intensity may often be due tochanges in the sensitivity of the gustatory transduction processrather than to changes in the molecular properties of the tastesolutions.     

Fast and slow contrast adaptation in retinal circuitry

The visual system adapts to the magnitude of intensity fluctuations, and this process begins in the retina. Following the switch from a low-contrast environment to one of high contrast, ganglion cell sensitivity declines in two distinct phases: a fast change occurs in <0.1 s, and a slow decrease over approximately 10 s. To examine where these modulations arise, we recorded intracellularly from every major cell type in the salamander retina. Certain bipolar and amacrine cells, and all ganglion cells, adapted to contrast. Generally, these neurons showed both fast and slow adaptation. Fast effects of a contrast increase included accelerated kinetics, decreased sensitivity, and a depolarization of the baseline membrane potential. Slow adaptation did not affect kinetics, but produced a gradual hyperpolarization. This hyperpolarization can account for slow adaptation in the spiking output of ganglion cells.     

Multiple mechanisms for contrast adaptation in the retina

The retina adapts to average light intensity but also to the range of light intensities (contrast). A study by Baccus and Meister, in this issue of Neuron, identifies three ways that ganglion cells and interneurons adapt to high contrast: shorten integration time, reduce gain, and depolarize. Only the depolarization decays, over tens of seconds.     

Profound contrast adaptation early in the visual pathway

Prior exposure to a moving grating of high contrast led to a substantial and persistent reduction in the contrast sensitivity of neurons in the lateral geniculate nucleus (LGN) of macaque. This slow contrast adaptation was potent in all magnocellular (M) cells but essentially absent in parvocellular (P) cells and neurons that received input from S cones. Simultaneous recordings of M cells and the potentials of ganglion cells driving them showed that adaptation originated in ganglion cells. As expected from the spatiotemporal tuning of M cells, adaptation was broadly tuned for spatial frequency and lacked orientation selectivity. Adaptation could be induced by high temporal frequencies to which cortical neurons do not respond, but not by low temporal frequencies that can strongly adapt cortical neurons. Our observations confirm that contrast adaptation occurs at multiple levels in the visual system, and they provide a new way to reveal the function and perceptual significance of the M pathway.