Patterns of speciation in the Yucca moths: parallel species radiations within the Tegeticula yuccasella species complex

The interaction between yuccas and yucca moths has been central to understanding the origin and loss of obligate mutualism and mutualism reversal. Previous systematic research using mtDNA sequence data and characters associated with genitalic morphology revealed that a widespread pollinator species in the genus Tegeticula was in fact a complex of pollinator species that differed in host use and the placement of eggs into yucca flowers. Within this mutualistic clade two nonpollinating "cheater" species evolved. Cheaters feed on yucca seeds but lack the tentacular mouthparts necessary for yucca pollination. Previous work suggested that the species complex formed via a rapid radiation within the last several million years. In this study, we use an expanded mtDNA sequence data set and AFLP markers to examine the phylogenetic relationships among this rapidly diverging clade of moths and compare these relationships to patterns in genitalic morphology. Topologies obtained from analyses of the mtDNA and AFLP data differed significantly. Both data sets, however, corroborated the hypothesis of a rapid species radiation and suggested that there were likely two independent species radiations. Morphological analyses based on oviposition habit produced species groupings more similar to the AFLP topology than the mtDNA topology and suggested the two radiations coincided with differences in oviposition habit. The evolution of cheating was reaffirmed to have evolved twice and the closest pollinating relative for one cheater species was identified by both mtDNA and AFLP markers. For the other cheater species, however, the closest pollinating relative remains ambiguous, and mtDNA, AFLP, and morphological data suggest this cheater species may be diverged based on host use. Much of the divergence in the species complex can be explained by geographic isolation associated with the evolution of two oviposition habits.     

Potential sweetening agents of plant origin. II. field search for sweet-tastingStevia species

Field work in Paraguay, Peru, Colombia and Mexico, including field organoleptic tests and interviews, was carried out in search of sweet-tasting Stevia species. Results of such tests performed on at least 31 species, as well as ethnobotanical data on 9 species, are presented. The data obtained showed that leaves of no other Stevia species studied possessed a potent sweet taste comparable to that of S. rebaudiana leaves. Since only 15% of the approximately 200 known species in this genus were investigated in this study, it is quite possible that further research may reveal additional sweet-tasting Stevia species.     

Species delimitation in <Emphasis Type="Italic">Epilobium</Emphasis> (sec. <Emphasis Type="Italic">Epilobium</Emphasis>, Onagraceae): morphological,molecular and palynological data

The genus Epilobium L. (Family Onagraceae) with about 200 species is taxonomically complicated due to wide inter-specific gene flow. There is no report on biosystematics of Epilobium species in Iran, therefore we studied 5 species of this genus using a combination of morphological, molecular (ISSR) and palynological data to delimit these species. All data revealed high degree of morphological and genetic overlap among the studied species. However, they could be separated when all studied features were used together. Morphological characters could delimit 3 species while genetic data separated them in two major groups. However, palynological data could delimit all five species studied. The species relationship was highly compatible in all three data sources used.     

Taxonomy,population status and ecology of Indian desert monitor lizard Varanus griseus koniecznyi Mertens 1954 in the Thar desert of Rajasthan

Among monitor lizards of the family Varanidae, Indian desert monitor lizard Varanus griseus koniecznyi Mertens 1954 is one of the lesser-known species globally and due to lack of data on this species it is so far not evaluated by IUCN and excluded from the latest assessment of monitor lizards of Southeast Asia and Indo-Australian Archipelago. The present study was undertaken from January 2013 to June 2017 to fill this gap during which taxonomic evaluation along with an assessment of population and ecology of this species was carried out in the Thar desert of Rajasthan (TDR). The study brought into knowledge many morphological variations along with intraspecific variations of scale microstructure of this lizard. The population density was found to be highest in the Jaisalmer (0.102/ha) district of western Rajasthan, followed by Bikaner (0.08/ha) and Sikar (0.077/ha) districts. The overall population was quite low (0.068/ha) in the area. The study further revealed the species is habitat specialist and lives in a narrow range of habitats and microhabitats, and hence, the species may not adapt to the rapidly changing environment in the TDR. Their activity was found to be highest between 9ndash;12 hrs followed by 12–15 hrs and foraging was found to be their predominant activity followed by resting and feeding. In the absence of any detailed study on this species, the study points towards immediate conservation efforts for the species in its current distribution. Baseline data generated through this study will no doubt help to safeguard the species in the TDR and further research on this species in the future.     

Erysiphe abbreviata on cherry bark oak--morphology, phylogeny and taxonomy

Powdery mildew on cherry bark oak (Quercus falcate var. pagodifolia) collected in Tennessee, USA, was determined to be Erysiphe abbreviata, a species confined to North America. The diagnostically important anamorph of this species is described for the first time. Sequence analyses of the rDNA ITS region and D1/D2 domains of the 28S rDNA were used to obtain phylogenetic data for and taxonomic conclusions about this species. The structure of the anamorph (Oidium subgen. Pseudoidium) and the molecular data support the placement of this species in Erysiphe emend. (including Microsphaera) as a species separate from the Eurasian Erysiphe alphitoides.     

Ecobiology and distribution ofSagittaria sagittifolia L. in Czechoslovakia

The paper summarizes hitherto known data concerning the biology and ecology ofSagittaria sagittifolia. The distribution of this species in Czechoslovakia was assessed on the basis of literature data, herbarium specimens and the authors’ own data. The occurrence of this species in plant communities is shown in tables from selected phytocoenological relevés. The chemical properties of the substratum in habitats ofSagittaria sagittifolia over all its distribution area in Czechoslovakia were studied and comparisons calculated by means of cluster analysis. Life cycle, seed production, germination and biomass production of this species were studied and compared with conditions in its habitats.     

Presence-absence versus presence-only modelling methods for predicting bird habitat suitability

Habitat suitability models can be generated using methods requiring information on species presence or species presence and absence. Knowledge of the predictive performance of such methods becomes a critical issue to establish their optimal scope of application for mapping current species distributions under different constraints. Here, we use breeding bird atlas data in Catalonia as a working example and attempt to analyse the relative performance of two methods: the Ecological Niche factor Analysis (ENFA) using presence data only and Generalised Linear Models (GLM) using presence/absence data. Models were run on a set of forest species with similar habitat requirements, but with varying occurrence rates (prevalence) and niche positions (marginality). Our results support the idea that GLM predictions are more accurate than those obtained with ENFA. This was particularly true when species were using available habitats proportionally to their suitability, making absence data reliable and useful to enhance model calibration. Species marginality in niche space was also correlated to predictive accuracy, i.e. species with less restricted ecological requirements were modelled less accurately than species with more restricted requirements. This pattern was irrespective of the method employed. Models for wide‐ranging and tolerant species were more sensitive to absence data, suggesting that presence/absence methods may be particularly important for predicting distributions of this type of species. We conclude that modellers should consider that species ecological characteristics are critical in determining the accuracy of models and that it is difficult to predict generalist species distributions accurately and this is independent of the method used. Being based on distinct approaches regarding adjustment to data and data quality, habitat distribution modelling methods cover different application areas, making it difficult to identify one that should be universally applicable. Our results suggest however, that if absence data is available, methods using this information should be preferably used in most situations.     

The determination of the partial 18 S ribosomal DNA sequences of Cordyceps species

Cordyceps species, which are used in Chinese traditional medicines, are fungal parasitesof insects. In this study the partial nucleotide sequences of 18 S ribosomal DNA from four Cordyceps species were determined and compared with the sequences of publishedascomycetes. The sequence data support the concept that Cordyceps species belong to thepyrenomycetes. Based on sequence data the phylogenetic tree was constructed using theneighbor-joining (NJ) method. Diversity in the phylogenetic tree was found for Cordyceps species. A new classification of Cordyceps species can be constructed based on thephylogenetic information obtained from such rDNA sequences.     

Taxonomic Resolution and Quantification of Freshwater Macroinvertebrate Samples from an Australian Dryland River: The Benefits and Costs of Using Species Abundance Data

In studies using macroinvertebrates as indicators for monitoring rivers and streams, species level identifications in comparison with lower resolution identifications can have greater information content and result in more reliable site classifications and better capacity to discriminate between sites, yet many such programmes identify specimens to the resolution of family rather than species. This is often because it is cheaper to obtain family level data than species level data. Choice of appropriate taxonomic resolution is a compromise between the cost of obtaining data at high taxonomic resolutions and the loss of information at lower resolutions. Optimum taxonomic resolution should be determined by the information required to address programme objectives. Costs saved in identifying macroinvertebrates to family level may not be justified if family level data can not give the answers required and expending the extra cost to obtain species level data may not be warranted if cheaper family level data retains sufficient information to meet objectives. We investigated the influence of taxonomic resolution and sample quantification (abundance vs. presence/absence) on the representation of aquatic macroinvertebrate species assemblage patterns and species richness estimates. The study was conducted in a physically harsh dryland river system (Condamine-Balonne River system, located in south-western Queensland, Australia), characterised by low macroinvertebrate diversity. Our 29 study sites covered a wide geographic range and a diversity of lotic conditions and this was reflected by differences between sites in macroinvertebrate assemblage composition and richness. The usefulness of expending the extra cost necessary to identify macroinvertebrates to species was quantified via the benefits this higher resolution data offered in its capacity to discriminate between sites and give accurate estimates of site species richness. We found that very little information (<6%) was lost by identifying taxa to family (or genus), as opposed to species, and that quantifying the abundance of taxa provided greater resolution for pattern interpretation than simply noting their presence/absence. Species richness was very well represented by genus, family and order richness, so that each of these could be used as surrogates of species richness if, for example, surveying to identify diversity hot-spots. It is suggested that sharing of common ecological responses among species within higher taxonomic units is the most plausible mechanism for the results. Based on a cost/benefit analysis, family level abundance data is recommended as the best resolution for resolving patterns in macroinvertebrate assemblages in this system. The relevance of these findings are discussed in the context of other low diversity, harsh, dryland river systems.     

The influence of spatial scale on cross-taxon congruence patterns and prediction accuracy of species richness

A comparison of species richness patterns of butterflies and birds was made using data from two grids of squares (small squares 137.5 km on a side and large squares 275 km on a side) covering western North America. Using geostatistical procedures, we found that the spatial patterns of species richness of these two taxa were related. The influence of grain size on the strength of this relationship was investigated by analysing the two data sets. For both data sets, the number of butterfly species in a square was a statistically significant predictor of the corresponding number of bird species. However, cross-validation techniques showed that the marginal improvement in prediction accuracy due to including butterflies as a predictor was greater in the large-square data. We explored the effect of areal extent on cross-taxon congruencies by investigating species richness patterns in four subsets of the small-square data. In regions with smaller areal extent, the cross-taxon congruence patterns were not substantially different from the pattern found in the full data set. Finally, using data-splitting techniques, we explored the relationships between prediction accuracy of species richness, sample size, areal extent of the sample, and grain size.     

Strong neutral spatial effects shape tree species distributions across life stages at multiple scales

Traditionally, ecologists use lattice (regional summary) count data to simulate tree species distributions to explore species coexistence. However, no previous study has explicitly compared the difference between using lattice count and basal area data and analyzed species distributions at both individual species and community levels while simultaneously considering the combined scenarios of life stage and scale. In this study, we hypothesized that basal area data are more closely related to environmental variables than are count data because of strong environmental filtering effects. We also address the contribution of niche and the neutral (i.e., solely dependent on distance) factors to species distributions. Specifically, we separately modeled count data and basal area data while considering life stage and scale effects at the two levels with simultaneous autoregressive models and variation partitioning. A principal coordinates of neighbor matrix (PCNM) was used to model neutral spatial effects at the community level. The explained variations of species distribution data did not differ significantly between the two types of data at either the individual species level or the community level, indicating that the two types of data can be used nearly identically to model species distributions. Neutral spatial effects represented by spatial autoregressive parameters and the PCNM eigenfunctions drove species distributions on multiple scales, different life stages and individual species and community levels in this plot. We concluded that strong neutral spatial effects are the principal mechanisms underlying the species distributions and thus shape biodiversity spatial patterns.     

Try Tri again? Resolving species boundaries in the Lomatium triternatum (Apiaceae) complex

Species boundaries have traditionally been delimited by applying phenotypic characters to a morphological species concept. With an increased understanding of the complexities of speciation as a process, species concepts have proliferated while at the same time, the ability to gather greater numbers and types of molecular characters has expanded the means by which species can be delimited. Phylogenetic studies of molecular data provide an opportunity to identify reciprocally monophyletic groupsand have led to the identification of cryptic or nearly cryptic species in which subtle differences in phenotypes or ecological niches can be uncovered only after monophyletic groups have been identified. Here, we investigate evolutionary relationships among a group of species in the Lomatium triternatum complex using molecular phylogenetic analyses for all samples, and ecological parameters for two of the 38 species included in this study. The results indicate that there are more reciprocally monophyletic groups in this complex than had been estimated using phenotypic data alone. The ecological data show a clear differentiation for the one pair of sister species where ecological sampling was available, implying that divergence within this group may have resulted from environmental selection for soil preferences that have been strong enough to result in speciation.     

Effects of species partition on explanatory variables in direct gradient analysis - a case study from Senegal

Abstract. Species-environment data from Senegal, West Africa, are used to study the effects of partition of a large species data set into subsets corresponding to rare and common species respectively. The original data set contains 129 woody plant species from 909 plots and 60 explanatory variables. By applying Canonical Correspondence Analysis to data subsets, marked differences in the forward-selected variables were detected. The highest resemblance was found between the complete species set and the common species subset. Only one of eight selected variables was common to all species and the rare species groups. These findings were tested with partial ordination, applying the selected variables from the original species group (Vb), as variables and covariables to the analyses of common and rare species. For the common species this application resulted in a constrained ordination with higher eigenvalues as compared to the set of variables selected with reference to the common species group. Using the rare species group, the application of Vb gave a much lower sum of eigenvalues than did the ordination with selected variables based on the rare species group only. Evidently, the set of variables selected on the basis of the rare species data were more significant. Hence, the resulting gradients depend on the frequency of the species. Gradient analysis is apparently only valid for groups of species with closely resembling characteristics. This implies that different functional types of species, with different distributions and abundances, respond individually to environmental variation. Extrapolating deduced gradients from one species group to another maybe risky, particularly when used in vegetation modelling.     

Effects of productivity on species–area curves in herbaceous vegetation: evidence from experimental and observational data

The effects of productivity on the parameters of the species–area curve were investigated in this paper using two data sets on terrestrial plant communities: (1) one including 48 plots in 12 experimental sites on ploughed, formerly cultivated fields in the Siena region, Italy, and (2) one including 40 plots in hay meadows in the Bremen region, Germany. In both regions, species presence of vascular plants was recorded in nested plots ranging in size from 0.004 to 256 m² and 0.001 to 1000 m², respectively. Productivity was estimated as dry standing biomass. In the Siena data set, species richness showed a humped‐back relation to biomass in the plot sizes up to 1 m². For the larger plot sizes, no significant correlations were found. In the Bremen data set, positive relation between species number and biomass was observed at the smallest spatial scale (0.001 m²), whereas the relation disappeared or tended to be negative for the larger plot sizes. In general, the slopes z of the log species–log area curves (SAC) were negatively related to biomass in both data sets, while the intercept c increased with biomass in the Siena data set and was unrelated to biomass in the Bremen data set. The relationship between c and z was negative in the Siena data set and positive in the Bremen data set. The above results differed somewhat depending on which plot sizes were considered for the calculation of the SAC. Literature data confirmed that there are no clear patterns in the inter‐correlations between productivity, small scale and large scale species richness. Sites differing in productivity and in the slopes and intercepts of SAC may thus give rise to different species richness–productivity relationships. There can be one possible relation between species richness and biomass at one spatial scale (e.g. humped‐back) and another type of relation, even opposite, at another spatial scale. This suggests that the properties of species–area curves do not respond in a uniform way to the changes in productivity, but depend on the type of habitat or plant community and its particular properties. The parameter of the SAC can then hardly be used as scale‐independent parameter to investigate the effects of ecological factors, such as productivity, on species richness. The lack of clear patterns in the relations between small scale and large scale species richness implies that the predictions of the species‐pool hypothesis may fail when applied to plot sizes as dealt with in this study.     

Avian diversity and endemism in Namibia: patterns from the Southern African Bird Atlas Project

Namibia supports a highly diverse avifauna of 644 species, including over 90 species endemic to the southern African subregion and 13 species endemic to the country. Patterns of species diversity in relation to protected areas and habitat types were analysed using data from the Southern African Bird Atlas Project. A modified Shannon index appropriate for atlas data was used to derive an index of diversity for all species, wetland, terrestrial, threatened, and regional endemic species. Species richness for Namibian endemics was mapped. Overall species diversity is highest in the northeast of Namibia where wetland and riparian habitats coincide. Both wetland and terrestrial species show highest diversity in this area. The greatest diversity of southern African endemics falls within the Savanna-Karoo systems. Several key areas are identified for red data species, including the Caprivi Strip, Kunene and Orange Rivers, coastal wetlands and ephemeral river mouths and pans. This highlights the pressures operating on wetland and riparian habitats in arid environments. Concentrations of Namibian endemics are found in the northwestern (Kaoko) escarpment of the country. Although much of the area of high diversity of wetland, terrestrial and red data species falls within protected areas, national and regional endemics are poorly represented within national parks.     

七种灯台报春组植物的细胞学研究

对报春花科（Primulaceae）报春花属（Primula）灯台报春组植物Section Proliferoe的7种报春进行了细胞学研究,其中腾冲灯台报春和川东灯台报春的核型分析为首次报道,结合已报道的灯台报春组其它植物的细胞学资料进行统计分析,结果表明灯台报春组植物在染色体基数、染色体形态、着丝点位置及染色体对称性上都具有很高的一致性,在灯台报春组有核型记录的种类中,其核型都属于Stebbins的2A型或2B型,核型差异很小,染色体基数均为x=11,推测其可能与报春花属中具有相同染色体基数的组亲缘关系更近。结合已发表的灯台报春组植物的细胞学资料及它们的形态特征,对其系统演化关系进行了比较分析,以期对该组的系统学及演化关系提供一些证据。     

Lazarus ecology: Recovering the distribution and migratory patterns of the extinct Carolina parakeet

The study of the ecology and natural history of species has traditionally ceased when a species goes extinct, despite the benefit to current and future generations of potential findings. We used the extinct Carolina parakeet as a case study to develop a framework investigating the distributional limits, subspecific variation, and migratory habits of this species as a means to recover important information about recently extinct species. We united historical accounts with museum collections to develop an exhaustive, comprehensive database of every known occurrence of this once iconic species. With these data, we combined species distribution models and ordinal niche comparisons to confront multiple conjectured hypotheses about the parakeet's ecology with empirical data on where and when this species occurred. Our results demonstrate that the Carolina parakeet's range was likely much smaller than previously believed, that the eastern and western subspecies occupied different climatic niches with broad geographical separation, and that the western subspecies was likely a seasonal migrant while the eastern subspecies was not. This study highlights the novelty and importance of collecting occurrence data from published observations on extinct species, providing a starting point for future investigations of the factors that drove the Carolina parakeet to extinction. Moreover, the recovery of lost autecological knowledge could benefit the conservation of other parrot species currently in decline and would be crucial to the success of potential de‐extinction efforts for the Carolina parakeet.     

Phylogenetic relationships of Australian members of the family percichthyidae inferred from mitochondrial 12S rRNA sequence data

Phylogenetic relationships among 20 Australian species of the family Percichthyidae were investigated from sequence data of two portions of the mitochondrial 12S rRNA gene. The molecular data indicate that Australian genera within this family cluster into three distinct clades. The first clade is composed of some species currently ascribed to the genus Macquaria, along with Nannatherina, Nannoperca, and Bostockia, the second of Maccullochella and two catadromous Macquaria species, and the third of Gadopsis. However, the positioning of Gadopsis within this family was unresolved. Monophyly within each genus was well supported, except for Macquaria, which is clearly polyphyletic. The molecular data were used to examine two hypotheses of Australian percichthyid evolution and favor a freshwater origin for the family.     

南亚热带常绿阔叶林地上碳储量空间分布特征及其影响因素

旨在探讨南亚热带常绿阔叶林地上碳储量空间分布特征及其影响因素,为了解该区域森林的碳汇功能提供理论依据。通过对鼎湖山南亚热带常绿阔叶林20 hm²固定森林样地调查数据,采用一元线性回归分析和主成分分析方法,划分优势种和非优势种,研究地上碳储量的空间分布和生物/非生物因素的影响,获取了以下结果:(1)优势种对鼎湖山南亚热带常绿阔叶林地上碳储量贡献更大(1533.85 Mg,74.72%),尤其是大径级物种(1389.68 Mg,67.69%)。优势种地上碳储量(CV=0.635)的空间分布较非优势种(CV=0.690)更加均匀。(2)物种多样性与优势种和总体地上碳储量负相关,而与非优势种正相关。(3)群落总体、优势种和非优势种的地上碳储量均与结构多样性显著正相关。然而,结构多样性对非优势种地上碳储量的影响程度高于优势种。(4)群落中的土壤营养度、凹凸度与地上碳储量正相关。综上所述,通过提升非优势种的物种多样性可以增加鼎湖山南亚热带常绿阔叶林地上碳储量。此外,改善土壤营养条件也有助于提升南亚热带森林的碳汇功能。     

菲律宾海脊索动物多样性评估: 基于OBIS数据库

菲律宾海邻近全球生物多样性和进化的中心, 分布着多种重要生物资源。了解本区生物多样性及受威胁物种的分布特征可对掌握其生物多样性现状, 以及未来实施有效的生物多样性保护管理策略提供重要依据。本文利用海洋生物地理信息系统(Ocean Biogeographic Information System, OBIS)数据库, 并参考世界自然保护联盟濒危物种红色名录(IUCN Redlist)的物种濒危程度评估结果, 构建了菲律宾海脊索动物生物多样性和受威胁物种数据库, 结合海洋生态因子特征对该海区脊索动物的物种多样性和不同等级受威胁物种的数量空间分布格局进行了初步分析, 并对脊索动物不同分类阶元生物多样性与生态因子的关系进行了相关性分析。结果表明, 本区海洋脊索动物门已报道11纲56目320科1,171属2,876种。其中在菲律宾海的边缘区域, 特别是菲律宾群岛、台湾岛、日本群岛、马里亚纳群岛及中央的九州-帕劳海脊附近海域, 生物多样性水平相对较高, 而中央海盆区的生物多样性较低。本海域鱼类生物多样性尤其丰富, 共计4纲45目292科1,105属2,768种, 在物种水平上占本区脊索动物物种数的96%。各分类阶元水平的多样性与初级生产力呈显著正相关, 而与水深呈显著负相关。本区脊索动物门受威胁物种共计54种, 其中极危3种、濒危5种、易危22种、近危24种, 分别约占全区脊索动物总种数的0.10%、0.17%、0.76%、0.83%。与本区生物多样性分布格局相似, 受威胁物种多分布于菲律宾海边缘区域, 在中央海脊和深水盆地区域分布较少。本研究表明, 对菲律宾海脊索动物特别是受威胁物种的保护应当以边缘区域优先; 但考虑到当前菲律宾海深海区域生物多样性数据的不足, 也应加强对中央海脊和深水盆地等区域的生物多样性普查。