Tracer Experiments in Feeding Littoral Foraminifera*†‡

SYNOPSIS. Tracer technic has proved to be an excellent tool in the study of predator-prey relationships among the foraminifera. More than fifty axenic species of protists including diatoms, dinoflagellates, chlorophytes, chrysophytes, cyanophytes, bacteria and yeasts were tested as potential food for Allogromia sp (NF), A. laticollaris, Am. monia beccarii, Quinqueloculina spp, Rosalina floridana, Anomalina sp, Elphidium sp, Spiroloculina hyalina, Globigerina bulloides, and Globorotalia truncatulinoides. Although many types of potential food are present in the environment, foraminifera select only certain organisms. The yeasts, cyanophytes, dinoflagellates, chrysophytes and most bacteria tested were not eaten. Selected species of diatoms, chlorophytes and bacteria were eaten in large quantity. Three additional factors affect feeding: the “age” of the food organism, the “age” of the foraminifer or its position in the life cycle, and the concentration of the food. Feeding by foraminifera on most food is erratic below a concentration of 10³ organisms and is approximately directly proportional to concentration within a range of 10³-10⁶ organisms per 10 ml experimental tube. A natural bloom of Protelphidium tisburyensis was analyzed. A high concentration of 6 species of diatoms characterized the community. A “bloom”-feeder hypothesis for foraminiferal nutrition is presented.     

Food selection by Labeo Rohita (Ham.) and its feeding relationship with other major carps

Selectivity of food byLabeo rohita (Ham.) was studied in a stocking pond (Moat), by calculating an Electivity index (E) for each food organism as described byIvlev (1961). It was found thatL. rohita was definitely selective in its feeding. In case of fingerlings, there was a strong selection for zooplanktonic organisms (Arcella andDifflugia among protozoans,Keratella andBrachionus among rotifer andDaphnia andCyclops among crustaceans) and smaller algae (Cosmarium andClosterium among desmisd,Euglena andVolvox among phytoflagellates and algal spores and zygotes) while most of the phytoplanktonic organisms, belonging to green algae, diatoms and blue green algae, were avoided. In case of adults, a strong negative selection was observed for all zooplanktonic organisms and a strong positive selection for most of the green algae and diatoms (Ankistrodesmus, Zygnema, Spirogyra, Selenastrum, Pediastrum, Scenedesmus, Tetraspora, Stephanodiscus, Naviculla, Diatoma, Synedra andNitzchia). However, all blue green algae were avoided.The feeding relationship ofL. rohita with other major carps,Cirrhina mrigala (Ham.) andCatla catla (Ham.) was studied in two different habitats, pond and river. It was observed that in both habitats all three species were found to feed on almost similar types of food organisms, but the quantity of any food item eaten by adults differed markedly from one species to another and the food items which were dominant in one species, were of secondary importancce for the other two species. The adults ofL. rohita were found to feed mainly on phytoplankton and macrovegetation, the main food of adultC. mrigala was decayed organic matter, sand and mud supplimented by plankton, while the food of adultC. catla was chiefly composed of zooplankton, and some phytoplankton. Hence there was no true identity of feeding habits between the adults of any two species. However, there was an indication of competition for food between the fingerlings of all three species, because all of them feed mainly on zooplankton (Crustaceans, rotifers and protozoans). However, such feeding habits lasted a very short time only and as the fishes grew, their feeding habits diverged.     

<Emphasis Type="Italic">C. elegans</Emphasis> behavior of preference choice on bacterial food

Caenorhabditis elegans is a free living soil nematode and thus in its natural habitat, C. elegans encounters many different species of soil bacteria. Although some soil bacteria may be excellent sources of nutrition for the worm, others may be pathogenic. Thus, we undertook a study to understand how C. elegans can identify their preferred food using a simple behavioral assay. We found that there are various species of soil bacteria that C. elegans prefers in comparison to the standard laboratory E. coli strain OP50. In particular, two bacterial strains, Bacillus mycoides and Bacillus soli, were preferred strains. Interestingly, the sole feeding of these bacteria to wild type animals results in extended lifespan through the activation of the autophagic process. Further studies will be required to understand the precise mechanism controlling the behavior of identification and selection of food in C. elegans.     

Food selection and consumption by estuarine nematodes

Summary The feeding strategies and feeding techniques of 12 nematode species, isolated from the Ems-Dollard estuary, were investigated in agar cultures. In the consumption of bacteria, algae, diatoms, protozoa and small metazoa, two main strategies are distinghuished: the non-selective strategy, characteristic of species living on the surface of macrophytes, and the selective strategy, characteristic of sediment-inhabiting species. The selective strategists showed various ingestion techniques, depending on the size and armature of the buccal cavity; food items could be ingested whole, or pierced or cracked and the contents sucked out.Publication No. A 73 of the project Biological Research in the Ems-Dollard estuary.     

Feeding ecology of the Kızılırmak toothcarp, <Emphasis Type="Italic">Aphanius marassantensis</Emphasis>: ontogenetic shift and seasonal diet variation

We studied the feeding ecology of an endemic cyprinodontid fish, Aphanius marassantensis (K?z?l?rmak Toothcarp), with special emphasis on seasonal and ontogenetic diet shift. The dietary composition revealed an omnivorous diet with great seasonal and ontogenetic variation. Cladocera and Calanoid Copepods (Diaptomus sp.) dominated the diet in Spring and Summer, whereas the food items of plant origin e.g. filamentous algae and diatoms were the most important components in Autumn and Winter. An ontogenetic diet shift was also demonstrated. While the feeding of juveniles was based mostly on planktonic organisms, adult individuals preferred larger prey taxa, such as Gammarus sp. and Gastropods. There was no significant sex-related variation in feeding with the exception for the volume of gut content. The investigation on the feeding strategy of A. marassantensis suggested a generalised feeding pattern with some specialised individuals. This generalist feeding habits may account for the well-established population of this species in a big reservoir under coexistence of two non-native fish species, Pseudorasbora parva and Atherina boyeri.     

The feeding of the larvae of Simulium austeni Edwards and Simulium (Wilhelmia) spp.

The possibility that the feeding rates of larvae of S. austeni and S. lineatum are influenced by the nature of the food material is considered in relation to natural river conditions and laboratory feeding experiments. Diatoms appeared to be the most satisfactory food source and bacteria (Pseudomonas) the poorest. Simuliid larvae attain high assimilation efficiencies when feeding on diatoms but the proportion of river suspended solids which they assimilate is probably very low.     

The role of mixotrophic protists in the population dynamics of the microbial food web in a small artificial pond

• 1 The seasonal variations of protist and rotifer populations were monitored over 1 year in a small artificial pond. Grazing rates on fluorescently labelled bacteria were also determined.
• 2 The data showed population dynamics similar to other small freshwater bodies; diatoms were numerous during the spring, chlorophytes dominated during the summer months, and mixotrophs, in particular Gymnodinium, dominated during the autumn and winter.
• 3 The mixotrophic dinoflagellates were responsible for a high chlorophyll concentration during the autumn and winter. Mixotrophs were important consumers of bacteria, particularly during the autumn when population densities of pure heterotrophs were low. Mixotrophs were an important component of the microbial food web in this pond.

     

A comparison of the trophic transfer of fatty acids in freshwater plankton by cladocerans and calanoid copepods

1. Analyses of zooplankton fatty acid (FA) composition in laboratory experiments and samples collected from lakes in New Zealand spanning a wide gradient of productivity were used to assess the extent to which FAs might infer their diet. We used the cladocerans, Daphnia and Ceriodaphnia, and the calanoid copepod, Boeckella, as test organisms, and monocultures of cryptophytes, chlorophytes and cyanobacteria as food. Based on reproductive success, cryptophytes were the highest food quality, chlorophytes were intermediate and cyanobacteria the poorest. 2. Several FA groups were highly correlated between zooplankton and their diets. They were monounsaturated fatty acids (MUFAs), and ω3 and ω6 polyunsaturated fatty acids (PUFAs) for cladocerans, and saturated fatty acids (SAFAs) and ω3 PUFAs for copepods. Several FAs varied significantly less in the zooplankton than in their monoculture diets, e.g. MUFAs in Daphnia, and ω3 and ω6 PUFAs in Ceriodaphnia, despite clear dietary dependency for these FAs. 3. Zooplankton collected from lakes in New Zealand had more eicosapentaenoic acid (EPA) (Daphnia), more highly unsaturated ω3 and ω6 FAs (C₂₀, C₂₂; Daphnia, Ceriodaphnia, Boeckella) and less ω3 C₁₈ PUFAs (Daphnia, Ceriodaphnia, Boeckella) and ω6 C₁₈ PUFAs (Daphnia, Ceriodaphnia) than measured in the same species reared on phytoplankton in the laboratory. 4. Analyses of FA composition of seston and freshwater zooplankton globally showed that, in general, zooplankton had a significantly higher proportion of arachidonic acid and EPA than seston, and copepods also had a higher percentage of docosahexaenoic acid than seston. 5. These results suggest that zooplankton selectively incorporate the most physiologically important FAs. This could be a consequence of preferential assimilation, selective feeding on more nutritious cells or locating and feeding within higher food quality food patches.     

Bacterial Colonization on Fecal Pellets of Harpacticoid Copepods and on Their Diatom Food

Fecal pellets make up a significant fraction of the global flux of organic matter in oceans, and the associated bacterial communities in particular are a potential food source for marine organisms. However, these communities remain largely unknown. In the present study, the bacterial communities on fecal pellets of the benthic copepod Paramphiascella fulvofasciata feeding on the diatoms Navicula phyllepta and Seminavis robusta were analyzed. The aim of this study was to characterize the bacterial communities associated with the diatoms and the fecal pellets by means of DGGE profiling. Furthermore, isolated bacteria were characterized by means of partial 16S rRNA gene sequencing. The composition of the bacterial microflora on fecal pellets was studied in terms of the effect of the original food source, the age of the fecal pellets and the copepod’s identity. Alphaproteobacteria, Flavobacteria, and Bacilli were found on the fecal pellets; whereas on diatoms, exclusively Gammaproteobacteria were identified. Especially after eating N. phyllepta, there was an important increase in bacterial diversity, although the diatom N. phyllepta harbored a less diverse bacterial community than S. robusta. Our data suggest that the additional bacteria originate from the copepod’s digestive tract and largely depends on the initial food source.     

Feeding ecology of shallow water meiofauna: insights from a stable isotope tracer experiment in Potter Cove, King George Island, Antarctica

Antarctic meiofauna is still strongly understudied, and so is its trophic position in the food web. Primary producers, such as phytoplankton, and bacteria may represent important food sources for shallow water metazoans, and the role of meiobenthos in the benthic-pelagic coupling represents an important brick for food web understanding. In a laboratory, feeding experiment ¹³C-labeled freeze-dried diatoms (Thalassiosira weissflogii) and bacteria were added to retrieved cores from Potter Cove (15-m depth, November 2007) in order to investigate the uptake of 3 main meiofauna taxa: nematodes, copepods and cumaceans. In the surface sediment layers, nematodes showed no real difference in uptake of both food sources. This outcome was supported by the natural δ¹³C values and the community genus composition. In the first centimeter layer, the dominant genus was Daptonema which is known to be opportunistic, feeding on both bacteria and diatoms. Copepods and cumaceans on the other hand appeared to feed more on diatoms than on bacteria. This may point at a better adaptation to input of primary production from the water column. On the other hand, the overall carbon uptake of the given food sources was quite low for all taxa, indicating that likely other food sources might be of relevance for these meiobenthic organisms. Further studies are needed in order to better quantify the carbon requirements of these organisms.     

Spatial patterns and feeding of meiobenthic harpacticoid copepods in relation to resident microbial flora

Distributional and feeding relationships of harpacticoid copepods and their microbial prey were examined in a tidal channel at Great Sippewissett Marsh. A horizontal zonation of photosynthetic microorganisms was composed of: 1) a diatom area; 2) a purple sulfur bacterial (Thiocapsa sp.) area; and 3) a clear area. Four species of harpacticoid copepods were associated with given areas. Leptocaris brevicornis occurred in very high densities in the diatom area but in relatively low densities in other areas. Mesochra lilljeborgi occurred in significantly higher densities in the purple and clear areas.Feeding experiments, using resident microbial flora labelled with NaH¹⁴CO₃ and ³H-thymidine, were conducted to determine which foods are 1) ingested but simply pass through the gut and 2) ingested, and retained. These experiments indicated that L. brevicornis ingested diatoms and the heterotrophs associated with the diatoms, but only retained the heterotrophic portion. Microscopic examination indicated that diatoms were passed out intact in feces. Oscillatoria sp. (cyanobacterium) was not ingested. Mesochra lilljeborgi ingested Spirulina sp. (cyanobacterium), Thiocapsa sp., and the heterotrophs associated with Thiocapsa but only retained the Thiocapsa label.These data for harpacticoids suggest that spatial distributions of meiofauna may be closely coupled with microbial food organisms which they consume. Also, that while several microbial foods may be ingested, only certain microbes are digested and assimilated as a food resource, further indicating the complexity of feeding relationships among the meiofauna.     

Free‐living nematodes as prey for higher trophic levels of forest soil food webs

Nematodes are the most abundant invertebrates in soils and are key prey in soil food webs. Uncovering their contribution to predator nutrition is essential for understanding the structure of soil food webs and the way energy channels through soil systems. Molecular gut content analysis of consumers of nematodes, such as soil microarthropods, using specific DNA markers is a novel approach for studying predator–prey interactions in soil. We designed new specific primer pairs (partial 18S rDNA) for individual soil‐living bacterial‐feeding nematode taxa (Acrobeloides buetschlii, Panagrellus redivivus, Plectus velox and Plectus minimus). Primer specificity was tested against more than 100 non‐target soil organisms. Further, we determined how long nematode DNA can be traced in the gut of predators. Potential predators were identified in laboratory experiments including nine soil mite (Oribatida, Gamasina and Uropodina) and ten springtail species (Collembola). Finally, the approach was tested under field conditions by analyzing five mite and three collembola species for feeding on the three target nematode species. The results proved the three primer sets to specifically amplify DNA of the respective nematode taxa. Detection time of nematode DNA in predators varied with time of prey exposure. Further, consumption of nematodes in the laboratory varied with microarthropod species. Our field study is the first definitive proof that free‐living nematodes are important prey for a wide range of soil microarthropods including those commonly regarded as detritivores. Overall, the results highlight the eminent role of nematodes as prey in soil food webs and for channelling bacterial carbon to higher trophic levels.     

Development of ice biota in a temperate sea area (Gulf of Bothnia)

A study of sea ice biota was carried out in the Gulf of Bothnia (northern Baltic Sea) during the winter of 1989–1990. Samples (ice cores) were taken at a coastal station at regular time intervals during the ice season. Chlorophyll a concentration, algal species distribution, bacterial numbers, and primary and bacterial production were measured. Colonization of the ice began in January when daylight was low. As the available light increased, the algae started to grow exponentially. The vertical chlorophyll a distribution changed and algal species composition and biomass changed during the season. During the initial and middle phase of colonization, ice-specific diatoms, Nitzschia frigida and Navicula pelagica, dominated the algal biomass. Nutrients (PO₄ ^3– and NO_3j) were found to be depleted during the time of algal exponential growth. The maximum algal biomass exceeded 800 g C 1^–1. The primary production supplied food for heterotrophic organisms. The presence of heterotrophic organisms of different trophic levels (bacteria, flagellates, ciliates and rotifers) indicated an active microbial food web.     

Bacterial feeders, the nematode Caenorhabditis elegans and the flagellate Cercomonas longicauda, have different effects on outcome of competition among the Pseudomonas biocontrol strains CHA0 and DSS73

How bacterial feeding fauna affects colonization and survival of bacteria in soil is not well understood, which constrains the applicability of bacterial inoculants in agriculture. This study aimed to unravel how food quality of bacteria and bacterial feeders with different feeding habits (the selective feeding flagellate Cercomonas longicauda versus the non-selective feeding nematode Caenorhabditis elegans) influence the abundance of two bacteria that compete for resources in simple model communities. Microcosms consisted of either one gfp-tagged bacterial strain (Pseudomonas fluorescens DSM50090 or one of two biocontrol strains P. fluorescens CHA0 or Pseudomonas sp. DSS73) or combinations of two bacterial strains. DSM50090 is a suitable food bacterium, DSS73 is of intermediate food quality, and CHA0 is inedible to the bacterial feeders. Bacterial and protozoan cell numbers were measured by flow cytometry. In the presence of flagellates, CHA0 increased its abundance as compared to the other biocontrol strain DSS73 or to DSM50090, which were both eaten by the flagellates. In contrast, the number of CHA0 declined as compared to DSS73 when the model community was subjected to nematode predation pressure. Hence, the results suggested that the outcome of competition among bacteria depended on their ability to cope with the prevailing bacterial predator.     

Kleptoplast distribution,photosynthetic efficiency and sequestration mechanisms in intertidal benthic foraminifera

Foraminifera are ubiquitously distributed in marine habitats, playing a major role in marine sediment carbon sequestration and the nitrogen cycle. They exhibit a wide diversity of feeding and behavioural strategies (heterotrophy, autotrophy and mixotrophy), including species with the ability of sequestering intact functional chloroplasts from their microalgal food source (kleptoplastidy), resulting in a mixotrophic lifestyle. The mechanisms by which kleptoplasts are integrated and kept functional inside foraminiferal cytosol are poorly known. In our study, we investigated relationships between feeding strategies, kleptoplast spatial distribution and photosynthetic functionality in two shallow-water benthic foraminifera (Haynesina germanica and Elphidium williamsoni), both species feeding on benthic diatoms. We used a combination of observations of foraminiferal feeding behaviour, test morphology, cytological TEM-based observations and HPLC pigment analysis, with non-destructive, single-cell level imaging of kleptoplast spatial distribution and PSII quantum efficiency. The two species showed different feeding strategies, with H. germanica removing diatom content at the foraminifer’s apertural region and E. williamsoni on the dorsal site. All E. williamsoni parameters showed that this species has higher autotrophic capacity albeit both feeding on benthic diatoms. This might represent two different stages in the evolutionary process of establishing a permanent symbiotic relationship, or may reflect different trophic strategies.Subject terms: Microbial ecology, Microbial ecology, Microbiology     

The feeding habits of a group of herbivorous rock-dwelling cichlid fishes (Cichlidae: Perciformes) from Lake Malawi,Africa

Synopsis The feeding; habits of a group of tropical herbivorous rock-dwelling cichlid fishes from Lake Malawi, Africa, are investigated using stomach content analyses. The various species fed selectively on the periphyton of the rocky shores. Blue-green alga of the genus Calothrix was the most common item ingested by the group. Diatoms (Chrysophyta) also were abundant food items. Discriminant analysis showed that dietary items were good variables to identify species. Interspecific dietary differences showed a continuum from those species feeding primarily on Calothrix to those feeding primarily on diatoms. Algal resources exhibit distinct patterns of spatial variation. Diet was correlated with foraging behavior and trophic morphology. Interspecific differences in diet could possibly facilitate ecological coexistence among various species. Such coexistence would contribute to the maintenance of the high diversity fish faunas characteristic of the Great Rift Lakes of Africa.     

Feeding of biofilm-dwelling nematodes examined using HPLC-analysis of gut pigment contents

The natural feeding behaviour of the nematodes Chromadorina bioculata (Schultze in Carus 1857) and Chromadorina viridis (Linstow 1876) was studied in situ, within epilithic biofilms of the Garonne River (France). Based on their feeding-type characteristics and population dynamics, it was hypothesised that these species feed selectively on microphytobenthos (MPB) within the biofilm, and that among MPB groups, diatoms are preferred. High-performance liquid chromatography (HPLC) was used for separation, identification and quantification of pigments both in nematode guts and in the biofilm. This is the first time that nematode gut pigment contents were examined under natural conditions. Diatoms dominated the MPB which also comprised cyanobacteria and green microalgae. The comparison between chlorophyll a content in nematode guts versus in the biofilm showed that C. bioculata and C. viridis fed opportunistically (non-selectively) on MPB within the biofilm. Only diatom biomarker pigments were found in nematode guts suggesting that they could preferentially fed on diatoms among MPB groups. However, the non-detection of biomarker pigments for other microphyte groups could be also linked to HPLC detection limits. It was estimated that Chromadorina nematodes daily ingested on average 0.03–0.67% of the MPB standing stock. This grazing covered only a small part of their energetic requirements, suggesting that besides MPB they probably also fed on other biofilm food sources. Some considerations on the applicability of the HPLC gut pigment analysis technique for the examination of nematode feeding are also presented.     

Identification of Compounds with Bioactivity against the Nematode Caenorhabditis elegans by a Screen Based on the Functional Genomics of the Marine Bacterium Pseudoalteromonas tunicata D2

Marine bacteria are a rich, yet underexplored, resource of compounds with inhibitory bioactivity against a range of eukaryotic target organisms. Identification of those inhibitors, however, requires a culturable or genetically tractable producer strain, a prerequisite that is not often fulfilled. This study describes a novel functional genomic screen that is based on expression of inhibitors in a heterogeneous recombinant host (i.e., Escherichia coli). Functional libraries were screened by selective grazing by the nematode Caenorhabditis elegans, in a simple, rapid, high-throughput manner. We applied our approach to discover inhibitors of C. elegans produced by the marine bacterium Pseudoalteromonas tunicata D2, a model organism for exploring a range of antagonistic activities between bacteria and eukaryotes and a known producer of several toxic compounds. Expression of P. tunicata DNA in E. coli and grazing selection by the nematode Caenorhabditis elegans identified two clones, with slow- and fast-killing modes of action. Genomic analysis of the slow-killing clone revealed that the activity was due to a small molecule, tambjamine, while the fast-killing activity involved a gene encoding for a novel protein. Microscopic analysis showed substantial colonization of the intestinal lumen, or rapid death of the nematode without colonization, for the two activities, respectively. The novel functional genomic screen presented here therefore detects new eukaryotic inhibitors with different chemical structures, kinetics, and predicted modes of actions.Marine environments harbor highly diverse microbial communities, with an estimated more than one million different species (60). The vast majority of these are still functionally undescribed and unexplored, and only a fraction of the total number of species can currently be investigated by culture-dependent methods (47). Surface-associated marine microorganisms thrive in challenging habitats, often characterized by space and nutrient limitation, competition with other microorganisms, and colonizing higher organisms, as well as the targeted predation pressure by protozoa, nematodes, and other grazers. In response to this highly competitive environment, microorganisms have evolved strategies such as the production of toxins, attachment structures, biofilm formation, and host resilience in order to prevent the settlement and growth of competitive colonizers and for protection against bacterivorous predators. In fact, some of these adaptive traits are now recognized as virulence factors against a range of eukaryotic organisms, including plants, animals, and humans (24, 25, 44, 46). Despite this realization, there is limited information available on the presence and function of virulence factors in marine microbial organisms, nor is the full potential to mine such organisms for novel compounds with bioactivity realized.The marine bacterial genus Pseudoalteromonas contains numerous species, which synthesize biologically active molecules. Many of these species have been demonstrated to produce an array of low- and high-molecular-weight compounds with antimicrobial, algicidal, neurotoxic, and other pharmaceutically relevant activities (7). P. tunicata strain D2 is the most comprehensively studied species within the genus (7). This species colonizes sessile eukaryotes such as algae and tunicates and is a producer of several compounds with inhibitory activities against a range of organisms. Although the identity of several of these compounds remains to be elucidated, they target a range of bacteria, fungi, invertebrate larvae, diatoms, algal spores, and protozoa (15, 28, 29). Furthermore, a recent analysis of the P. tunicata D2 genome revealed properties characteristic of pathogens such as curli, several proteases, and homologs to virulence regulators (59). Hence, P. tunicata D2 is a powerful model system in which to investigate bioactive compounds and their mode of action, including those that serve as virulence factors.In order to detect and identify bacterial bioactive compounds that target multicellular eukaryotes, the nematode Caenorhabditis elegans can be utilized as a model system. This free-living worm provides several practical experimental advantages, including its ability to feed solely on bacteria, a short life cycle, and easy cultivation in large numbers. Comprehensive studies have reported the nematode as a versatile model metazoan in which to assess the virulence of many human, animal, plant, and insect pathogens (53). Some of the characteristics of the C. elegans immune system are conserved in higher eukaryotic organisms; moreover, diverse bacterial virulence factors necessary for killing of the nematode are used as virulence strategies regardless of the host (53). Despite the progress made using this model, current methods that help elucidate microbial genes involved in toxin-mediated killing or virulence are time-consuming or require expensive automation. Furthermore, a large fraction of potentially pathogenic bacteria elude investigations because they are not cultivable by using conventional laboratory techniques (47) or because of incompatible culture conditions for the pathogen and C. elegans (e.g., C. elegans is cultured at 25°C, while the Yersinia pestis virulence factors are upregulated only at 37°C [55]). Therefore, new high-resolution and simple methods are required to study genes and effector molecules mediating the inhibitory or toxic activity displayed by both cultured and uncultured bacteria.In the present study we investigate the presence and activity of toxins in P. tunicata D2 with a rapid, culture-independent, eukaryotic screening assay. Our novel approach is based on the ability of C. elegans, using a sophisticated chemosensory system, to perceive and behaviorally respond to a range of chemical cues, including deterrence from noxious substances and attraction to nutrients or signals (2, 4, 26, 27, 45, 51, 52, 61, 62). The high-throughput screen successfully detected antinematode bioactive compounds and rapidly identified the responsible P. tunicata D2 genes and gene products in a recombinant Escherichia coli clone library. To our knowledge, this is the first time that a functional genomic library screening has been used to identify antinematode bioactive compounds.     

Seasonal variation of food and feeding in burrowing goby <Emphasis Type="Italic">Parapocryptes serperaster</Emphasis> (Gobiidae) at different body sizes

Diet composition and feeding habits of the burrowing fish Parapocryptes serperaster were investigated on different fish sizes across dry and wet seasons in the Mekong Delta, Vietnam. The gut length was positively related to fish length; the gut length was 1.57 ± 0.30 times the total length, which is in the range for omnivore (1–3). Detritus, algae and copepods were the main food items in the foregut. The diet composition showed seasonal and intraspecific variations in all fish sizes. The diet diversity varied with fish size and the dry-wet season pattern, and small fish had a higher diet diversity than large fish. The diet evenness index and Costello graphic analysis indicate that this goby is a generalist feeder and feeds mainly on detritus, followed by diatoms, and could obtain food from the bottom and the water column. The feeding intensity of P. serperaster was higher in the wet season than in the dry season, but was not significantly affected by fish size. The P. serperaster fed on Navicula spp. in the wet season, but on Nitzschia spp. in the dry season. The understanding of food and feeding habits of P. serperaster contributes to our knowledge on feeding adaptation of small-bodied bottom-dwelling gobies to the mud flat habitats in tropical monsoonal regions.     

Chemical defenses against diatom fouling in Antarctic marine sponges

Antarctic sponges are commonly fouled by diatoms, sometimes so heavily as to occlude pores employed in filter feeding and respiration. This fouling becomes heavier during the annual summer microalgal bloom. Polar and non‐polar extracts of eight species of marine sponges from McMurdo Sound, Antarctica were assayed for cytotoxicity against sympatric fouling diatoms. To identify compounds potentially released by sponges as defenses against diatom biofouling, only fractions of crude extracts that were soluble in seawater or 2% methanol in seawater were assayed. Significant bioactivity was present in seven of the eight species. Both Mycale acerata and Homaxinella balfourensis displayed moderate levels of defense against diatoms even though they are not or are only weakly chemically defended against bacteria and predators. Calyx acuarius extracts, which do have antipredator and antibacterial effects, had no effect on diatoms except at levels many fold higher than present in the intact animal. These results strongly suggest some level of specificity for chemical defenses against diatom fouling in antarctic sponges.