Shell form and growth of the bivalveScapharca broughtoni

Linear growth rates and age-related changes in shell form are analyzed in the bivalveScapharca broughtoni from several areas of Peter the Great Bay, Sea of Japan. Mollusks grow fast during the first 4 to 5 years of life; at the age of 10–12 years, the annual growth increment in shell size does not usually exceed 1–3 mm. Irrespective of habitat, the shell valve convexity ofS. broughtoni increases with age, but the most significant changes in shell form occur during the first year of life. The peculiarities of growth and age-related changes in shell form ofS. broughtoni are discussed from the standpoint of the functional morphology of burrowing bivalve mollusks, which, at the postlarval stage, change from an attached to a free-living mode of life.     

Shell Beds as paleoecological puzzles: A case study from the Upper Permian of the Paraná Basin, Brazil

Summary Microstratigraphic, sedimentological, and taphonomic features of the Ferraz Shell Bed, from the Upper Permian (Kazanian-Tatarian?) Corumbataí Formation of Rio Claro Region (the Paraná Basin, Brazil), indicate that the bed consists of four distinct microstratigraphic units. They include, from bottom to top, a lag concentration (Unit 1), a partly reworked storm deposit (Unit 2), a rapidly deposited sandstone unit with three thin horizons recording episodes of reworking (Unit 3), and a shell-rich horizon generated by reworking/winnowing that was subsequently buried by storm-induced obrution deposit (Unit 4). The bioclasts of the Ferraz Shell Bed represent exclusively bivalve mollusks.Pinzonellaillusa andTerraia aequilateralis are the dominant species. Taphonomic analysis indicates that mollusks are heavily time-averaged (except for some parts of Unit 3). Moreover, different species are time-averaged to a different degree (disharmonious time-averaging). The units differ statistically from one another in their taxonomic and ecological composition, in their taphonomic pattern, and in the size-frequency distributions of the two most common species. Other Permian shell beds of the Paraná Basin are simílar to the Ferraz Shell Bed in their faunal composition (they typically contain similar sets of 5 to 10 bivalve species) and in their taphonomic, sedimentologic, and microstratigraphic characteristics. However, rare shell beds that include 2–3 species only and are dominated by articulated shells preserved in life position also occur. Diversity levels in the Permian benthic associations of the Paraná Basin were very low, with the point diversity of 2–3 species and with the within-habitat and basin-wide (alpha and gamma) diversities of 10 species, at most. The Paraná Basin benthic communities may have thus been analogous to low-diversity bivalve-dominated associations of the present-day Baltic Sea. The ‘Ferraz-type’ shell beds of the Paraná Basin represent genetically complex and highly heterogeneous sources of paleontological data. They are cumulative records of spectra of benthic ecosystems time-averaged over long periods of time (10²–10⁴ years judging from actualistic research). Detailed biostratinomic reconstructions of shell beds can not only offer useful insights into their depositional histories, but may also allow paleoecologists to optimize their sampling designs, and consequently, refine paleoecological and paleoenvironmental interpretations.     

A comparative study of samples of the bivalve <Emphasis Type="Italic">Ruditapes philippinarum</Emphasis> (Adams et Reeve, 1850) from populations and shell assemblages

According to the results of a comparative analysis of the size and age structures of samples from a population of the bivalve mollusk Ruditapes philippinarum (Manila clam) and from shell assemblages of this species, the possibility of data acquisition on populations using samples from shell assemblages was assessed. A considerable coincidence of these parameters after taking the losses of small individuals during formation of shell assemblage into account, which depended on the location and conditions of assemblage formation, was recorded. Due to the good level of preservation of the shells of older individuals, the sample from the assemblage gave a more comprehensive appreciation of the maximum size and life span of the species than the sample of live mollusks from the natural habitat. Samples from shell assemblages may be used for growth rate estimation of clams without catching live individuals, as the results from studying the linear growth of mollusks based on samples from live populations and from shell assemblages did not differ significantly. Samples from many-year shell accumulations can also be useful for revealing the periods of the highest death rates, the most vulnerable periods in the ontogenesis of the mollusks, and, in some cases, the causes of their death.     

Life cycle,population dynamics,growth and production of <Emphasis Type="Italic">Abra segmentum</Emphasis> (Mollusca,Bivalvia) at low salinities in a Mediterranean lagoon

Aspects of the biology of Abra segmentum were investigated at low salinities in a Mediterranean coastal lagoon (Monolimni Lagoon, Northern Aegean Sea). Monthly samples were collected during the period from February 1998 to January 1999. Recruitment occurred from mid-spring to early autumn (0.3–5.7 psu) and recruits grew during summer and autumn (1.2–5.7 psu), while a major part vanished during next autumn, displaying a maximum life span of about 20 months. A positive correlation was found between the percentage of individuals having a shell length of ≤3.5 mm and temperature; age group 0 showed a growth rate of 0.97 mm per month, and the largest individual collected had a 19.76 mm shell length. The population density sharply increased during late spring (0.3–1.2 psu); this increase was followed by a decline during summer and, afterwards, a gradual increase up to late autumn. Secondary production calculated by the size–frequency method gave a mean annual density (n) of 3,357 individuals m⁻², a mean annual biomass (B) of 21.98 g DW m⁻², an annual production (P) of 73.72 g DW m⁻² and a P:B ratio of 3.35. A comparison of the present data with available data of A. segmentum populations from higher salinity habitats revealed that this bivalve in the study area showed a life history pattern similar to that of other populations of the species and a comparatively high growth rate, maximum body size, n, B, P and P:B ratio. Our findings suggest that the studied aspects of A. segmentum biology could not be markedly affected by low salinities.     

Seasonal dynamics of phytoplankton in a lagoon-type lake Izmenchivoye (Southeast Sakhalin)

The seasonal changes in taxonomic structure, dynamics of number, and biomass of phytoplankton in the Izmenchivoye lagoon lake (southeast Sakhalin) were studied. In all, 266 species and intraspecies taxa of microalgae were revealed. The greatest species diversity (according to the Shannon index) was observed in May, August and October (H = 2.76–2.89), the least (H = 0.5–0.86), in April and January of 2006. The monthly average number varied from 997 up to 84 282 cells/l, and biomass from 18.98 up to 878.62 mg/m³. The average annual number of phytoplankton and its biomass were 32 650 cells/l and biomass 172.13 mg/m³ respectively. The maximum number was registered in August, 2005, and maximum biomass was recorded in January, 2006. Winter, spring and summer peaks of number coinciding with those of biomass were registered. For the first time, winter bloom of phytoplankton was registered in inland waters of the Sakhalin Island. In the winter and spring the basic input to formation of the parameters was composed of diatoms; in summer and autumn it was composed of by flagellates (dinophyta and cryptophyta).     

Ancient Mitochondrial DNA Reveals the Origin of Sus scrofa from Rebun Island, Japan

The Kabukai A site (5 to 8C A.D.) of the Okhotsk cultural area is on Rebun Island, a small island near the coast, north–northwest of Hokkaido, Japan. Specimens of Sus scrofa, called the Sakhalin pig, were discovered in five cultural layers at the Kabukai A site. Ancient DNA was extracted from the remains of 42 Sakhalin pig bones. Thirty-nine nucleotide sequences of the 574-bp mitochondrial DNA control region, estimated to have originated from at least 21 individuals, were amplified and analyzed phylogenetically. Nine distinct haplotypes (A1, A2, A3, B1, B2, C1, C2, D1, and D2) from this site were classified into four haplotype groups (A, B, C, and D) by parsimonious network analysis. Phylogenetic analysis of 9 ancient and 55 modern haplotypes indicated that the population of Sakhalin pigs at the Kabukai A site belonged to two distinct clusters; haplotype groups A and B formed a cluster comprised only of themselves, and haplotype groups C and D belonged to the cluster of one of the two genetic groups of Japanese wild boars uniquely distributed in the western part of Japan, including one northeast Mongolian wild boar. Analysis of the haplotype distribution among three archaeological sites and their historical transitions among the five layers reflecting the cultural periods at the Kabukai A site suggests that the Sakhalin pig populations were introduced from Sakhalin island and the Amur River basin in the northeastern Eurasian continent together with some cultural influences. Received: 18 April 2000 / Accepted: 24 November 2000     

The peculiarities of foraging migrations of the Korean-Okhotsk gray whale (<Emphasis Type="Italic">Eschrichtius robustus</Emphasis>) population in russian waters of the Far Eastern seas

Photographic identification of the Korean-Okhotsk gray whale Eschrichtius robustus population has been conducted since 2002 by researchers of the Institute of Marine Biology at the Far East Branch of the Russian Academy of Sciences (IMB FEB RAS), with financial support provided by Exon Neftegas, Ltd. and Sakhalin Energy Investment Co., in order to study the migration features and biology of this species. In 2008, photo-ID studies were carried out in two areas, off the northeastern coast of Sakhalin Island and off the southeastern coast of Kamchatka. As a result of the studies, 122 whales known from the Sakhalin gray whale catalogue were photographed. Of them, 97 individuals were registered off Sakhalin, 24, off Kamchatka, and one whale was observed at both sites. In addition, 25 more gray whales that had not been sighted off Sakhalin Island before were found off the coast of Kamchatka. Based on these photographic materials, the whales physical and skin conditions were also analyzed. Cases of sightings of gray whales in areas that are remote from their traditional summer and fall feeding grounds in the Far Eastern seas of Russia are discussed.     

Records of the gadoid fish <Emphasis Type="Italic">Arctogadus glacialis</Emphasis> (Peters, 1874) in the European Arctic

The Arctogadus glacialis is endemic to the Arctic Ocean and its apparently disjunct circumpolar distribution range from the Siberian coast through the Chukchi Sea and the Canadian Arctic to the shelf off NE Greenland. Records of A. glacialis are scarce in the European Arctic and here we present all available and reliable records of the species in the area. Altogether, 296 specimens of A. glacialis are reported from 53 positions in the European Arctic during the period 1976–2008. The specimens were registered off Iceland and the Jan Mayen Island, northwest and northeast of Svalbard, northeast in the Barents Sea, and south and east off Franz Josef Land. The additional records show that A. glacialis display a circumpolar and more continuous distribution than described before. In the European Arctic, A. glacialis has been caught at 155–741 m depth with the highest abundance at 300–400 m. We therefore suggest that A. glacialis is more associated to the continental shelves surrounding the Arctic Ocean than previously thought. The length–weight relation of A. glacialis is similar across the European Arctic.     

Abundance and Distribution of Pelagic Larvae of Bivalves and Echinoderms in Busse Lagoon (Aniva Bay,Sakhalin Island)

The taxonomic composition and numbers of pelagic larvae of bivalves in Busse Lagoon and the contiguous areas of Aniva Bay (southern Sakhalin) were studied in 2000–2001. In comparison with 1973–1974, the total density of larvae increased 2–3 times, but their taxonomic composition changed and a redistribution of dominant species occurred. Numbers of bivalve larvae increased at the expense of larvae of Musculista senhousia, Crassostrea gigas, and species of the Tellinidae. In 2000–2001, larvae of Ruditapes philippinarum, Mya arenaria, Swiftopecten swifti, and some other species were encountered in plankton very rarely or were not found at all. The drastic decrease in the larval density of some bivalve species was caused by uncontrolled and nearly total harvesting of mollusks. Larval echinoderm numbers in the lagoon were not high in 2000–2001; larvae of the sea cucumber Apostichopus japonicus and the sea urchin Strongylocentrotus intermedius predominated.     

On catches of low-latitude fish at Sakhalin coast in summer 2014

In summer 2014, catches of three tropical and subtropical fish species were registered at Sakhalin coast. The Japanese sea bass Lateolabrax japonicus was detected at Sakhalin coast for the first time, while the Japanese amberjack Seriola quinqueradiata was first detected in the Sea of Okhotsk waters sweeping the Sakhalin coast. The catch of the great white shark Carcharodon carcharias is the second confirmed case of this fish occurrence near the Sakhalin coast for the last 10 years.     

Population structure,biomass and production of the West African lucinid <Emphasis Type="Italic">Keletistes rhizoecus</Emphasis> (Bivalvia,Mollusca) in Sivibilagbara swamp at Bodo Creek,Niger Delta,Nigeria

The West African lucinid bivalve Keletistes rhizoecus (Oliver, Basteria 50:47–64, 1986) is only known from the Niger Delta in Nigeria. Due to inaccessibility of its habitat population biology, growth parameters, biomass, and annual secondary production are unknown. The danger of oil pollution threatens the localities where this species occurs. Hence, ecological characteristics of the species were investigated quantitatively from May 2007 to April 2008 at Sivibilagbara, a protected mangrove swamp at Bodo Creek in the lower Niger Delta. Density of this chemosymbiotic lucinid was significantly higher than data previously reported. Temporal size distribution of the population showed minor changes due chiefly to recruitment and growth increments. Recruits peaked in February and September. The species lifespan is estimated to be 1.2 years. The biomass and production values are relatively high, but comparable to those of other bivalve species, especially those from nearby Andoni intertidal flats.     

Mitochondrial DNA Diversity and Genetic Differentiation of the Honeybee (Apis cerana) in Thailand

Genetic diversity of the honeybee (Apis cerana) in Thailand collected from north, northeast, the central region, peninsular Thailand, and Samui Island (n = 181) was examined by PCR–RFLP of ATPase6–ATPase8. Interestingly, 78 individuals (43.09%) of the southern-latitude bees exhibited length heteroplasmy of the PCR product. The gel-eluted ATPase6–ATPase8 (825 bp) of each bee was restricted with TaqI, SspI, and VspI, respectively. Eight mitotypes were generated and revealed biogeographic differentiation between conspecific samples of A. cerana. AAA, ACA, AAD, BAA, ADA, and ABA were found only in the north-to-central samples (north, northeast, and central region); BBB and BBC were found in the southern-latitude bees; and BBC was restrictively found in the Samui sample. Large genetic distances were observed between each of the north-to-central samples and peninsular Thailand and Samui samples, but lower levels of genetic distance were found within each region. Geographic heterogeneity and phylogenetic analyses indicated that Thai A. cerana could be genetically differentiated into northern Thailand, peninsular Thailand, and Samui Island populations.     

Occurrences of harmful algal blooms (HABs) associated with ocean environments in the South China Sea

Harmful algal blooms (HABs) occur frequently in the South China Sea (SCS), causing enormous economic losses in aquaculture. We analyzed historical HAB records during the period from 1980 to 2003 in SCS. We found that HABs-affected areas have expanded and the frequency of HABs varied during this period. The seasonal and annual variations, as well as causative algal species of HABs are different among the four regions. Areas with frequent HABs include the Pearl River Estuary (China), the Manila Bay (the Philippines), the Masinloc Bay (the Philippines), and the western coast of Sabah (Malaysia). HABs occurred frequently during March–May in the northern region of SCS, May–July in the eastern region, July in the western region, and year-round in the southern region. Among the species that cause HABs, Noctiluca scintillans dominated in the northern region, and Pyrodinium bahamense in the southern and eastern regions. Causative species also varied in different years for the entire SCS. Both P. bahamense and N. scintillans were the dominant species during 1980–2003. Some species not previously recorded formed blooms during 1991–2003, including Phaeocystis globosa, Scrippsiella trochoidea, Heterosigma akashiwo, and Mesodinium rubrum. Variations in HABs are related to various regional conditions, such as a reversed monsoon wind in the entire SCS, river discharges in the northern area, upwelling in Vietnam coastal waters during southwest winds and near Malaysia coastal waters during northeast winds, and eutrophication from coastal aquaculture in the Pearl River estuary, Manila Bay, and Masinloc Bay. Handling editor: D. Hamilton     

<Emphasis Type="Italic">Neoskrjabinolepis nuda</Emphasis> n. sp. from shrews on Sakhalin Island,Russia, with a taxonomic review of <Emphasis Type="Italic">Neoskrjabinolepis</Emphasis> Spasskii, 1947 (Cestoda: Cyclophyllidea: Hymenolepididae)

Neoskrjabinolepis (Neoskrjabinolepidoides) nuda n. sp. is described from the shrews Sorex unguiculatus (type-host), S. gracillimus, S. isodon and S. caecutiens on Sakhalin Island, Russia. The new species is characterised by: rostellar hooks 40–44 μm long and provided with small epiphyseal thickening of the handle; a long (95–100 μm) cirrus consisting of basal region with claw-shaped spines, a parabasal region with thin needle-shaped spines and an unarmed distal region; a cirrus-sac extending well into the median field; and 15–22 eggs per gravid uterus. A review of the species of Neoskrjabinolepis Spasskii, 1947 is presented. Currently, this genus includes nine species and is divided in two subgenera on the basis of strobilar development, which is gradual in the subgenus Neoskrjabinolepis (four species) and serial in the subgenus Neoskrjabinolepidoides Kornienko, Gulyaev & Mel’nikova, 2006 (five species). An amended generic diagnosis and an identification key to Neoskrjabinolepis spp. are presented.     

Studies on the association of Metopa glacialis (Amphipoda, Crustacea) and Musculus discors (Mollusca, Mytilidae)

Associations between amphipods and mollusks are known from several examples, but the possible life-history strategies these amphipods utilize are often unknown. We present here the autecology of the stenothoid amphipod Metopa glacialis, an associate of the mytilid bivalve Musculus discors. Samples collected from northeast Spitsbergen of 279 M. discors show a prevalence of M. glacialis in 75%, with a variation between 1 and 41 amphipods within one mussel, the mean being 3.7. The associated amphipods have been analysed for several life-history traits such as size distributions, brood sizes and cohort compositions. Analyses of fatty acid composition of the associated species indicate different food sources for the amphipods and mollusks. Based on our data we propose two possible life-history strategies for M. glacialis: 3 or more seasons of single broods and parental care over more than 1 year after hatching, or multiple broods in one season and extended parental care. To our knowledge multiple broods in one season and extended parental care have never been reported in arctic amphipods.     

An immunofluorescent survey of the brown tide chrysophyte Aureococcus anophagefferens along the northeast coast of the United States

Surveys were conducted along the northeast coast of the USA.between Portsmouth, NH, and the Chesapeake Bay in 1988 and 1990,to determine the population distribution of Aureococcus anophagefferens,the chrysophyte responsible for massive and destructive ‘browntides’ in Long Island and Narragansett Bay beginning in1985. A species-specific immunofluorescent technique was usedto screen water samples, with positive identification possibleat cell concentrations as low as 10–20 cells ml^–1.Both years.A.anophagefferens was detected at numerous stationsin and around Long Island and Barnegat Bay, NJ, typically athigh cell concentrations. To the north and south of thus ‘center’,nearly half of the remaining stations were positive for A.anophagefferens,but the cells were always at very low cell concentrations. Manyof the positive identifications in areas distant from Long Islandwere in waters with no known history of harmful brown tides.The species was present in both open coastal and estuanne locations,in salinities between 18 and 32 practical salinity units (PSU).The observed population distributions apparently still reflectthe massive 1985 outbreak when this species first bloomed, giventhe number of positive locations and high abundance of A.anophagefferensin the immediate vicinity of Long Island. However, the frequentoccurrence of this species in waters far from this population‘center’ is disturbing. Aureococcus anophagefferensis more widely distributed than was previously thought. Numerousareas thus have the potential for destructive brown tides suchas those associated with the sudden appearance of the speciesin 1985.     

Genetic Conservation of Insular Populations of Monterey Pine (Pinus Radiata D. Don)

Monterey pine (Pinus radiata D. Don) has only five extant native populations: three disjunct populations along the coast of California, USA and two on Mexican islands. All populations have been influenced by human activity, but the island populations in particular have been affected by introduced biota. On Guadalupe Island, the pine population has suffered drastically from overgrazing by introduced goats. We visited both island populations and described their status, took measurements, and made seed collections. We counted approximately 200 mature pine trees and virtually no seedlings on Guadalupe Island: a reduction of approximately half the population in the last 50 years. The trees are all large (mean diameter of 144 cm) –considerably larger than trees from the other four populations – and arguably near the end of their natural lifespan. The population on Cedros Island is much more robust, with thousands of trees. None sampled were as large as those on Guadalupe Island (mean diameter of 20 cm) and many groves were young and even-aged – presumably the consequence of natural regeneration after a recent fire. Tissue samples from trees on both islands did not show evidence of infection from the pitch canker pathogen, Fusarium circinatum, that has caused significant mortality in the three mainland populations. Caution is recommended in any restoration activity for the Guadalupe Island pines. Inbreeding levels could indicate the need for some planting or seeding intervention but there are also risks associated with this. Natural regeneration – after goat removal – is preferred.     

Biological specific features of the Lower Amur grayling Thymallus tugarinae (Salmoniformes: Thymallidae): 1. Age composition

We consider age composition of samples of the Lower Amur grayling Thymallus tugarinae inhabiting water bodies of the lower and middle course of the Amur and several rivers of the northwestern part of Sakhalin Island and the southern coast of the Sea of Okhotsk. Age composition of the Lower Amur grayling from the studied samples is not similar because of several reasons. In rivers of the Amur basin, the species has a maximal age of 6+.     

Post‐glacial history and introgression in Abies (Pinaceae) species of the Russian Far East inferred from both nuclear and cytoplasmic markers

Aim The main aim of the present study is to infer the post‐glacial history of Abies species from north‐east Asia and to test the hypotheses that coastal Abies populations suffered less from climatic fluctuations during Pleistocene glacial periods than their more continental counterparts, and that Sakhalin was a major area of introgression. Location Natural ranges of the fir species Abies nephrolepis, Abies sachalinensis and Abies holophylla in the Russian Far East, and of Abies gracilis, which is endemic to the Kamchatka Peninsula. Methods Nineteen populations were sampled for allozyme analysis. Seventeen of these populations were also screened for variation at two paternally inherited chloroplast DNA microsatellite loci (cpSSR) and variation at one maternally inherited mitochondrial marker (nad4‐3/4). Finally a subset of 11 populations was analysed with amplified fragment length polymorphism (AFLP). Comparisons were made with already available Abies sibirica data. For all sets of markers, we estimated genetic diversity and differentiation using an analysis of molecular variance (AMOVA). Population clustering was assessed with a Bayesian approach implemented in structure v.2.3. Results Among the three major species, A. sibirica, A. nephrolepis and A. sachalinensis, A. sachalinensis demonstrated the highest cytoplasmic and nuclear diversity and the most continental species, A. sibirica, the lowest. Both nuclear and mitochondrial DNA markers revealed the presence of a transitional zone on Sakhalin Island between A. nephrolepis and A. sachalinensis of south Sakhalin. The structure analysis delivered very clear results confirming the admixed origin of A. sachalinensis, with a genetic contribution from A. nephrolepis. No variation in cytoplasmic markers was found in A. gracilis, suggesting the occurrence of a recent bottleneck. Main conclusions There is a clear reduction of genetic diversity in Abies species from the Pacific coast into the continent. The higher diversity in A. sachalinensis could have two causes: a larger effective population size in the islands due to relatively stable climatic conditions and consequently less pronounced demographic fluctuations in population size and/or hybridization with continental and Japanese populations. Sakhalin Island is a major transitional zone for conifer species. Finally, the fir from Kamchatka, A. gracilis, should be regarded as a separate species closely related to the A. nephrolepis–A. sachalinensis complex.     

Macrozoobenthos of two Antarctic glacial coves: a comparison with non-disturbed bottom areas

There are only few studies on shallow Antarctic benthic communities associated with habitats affected by intense mineral sedimentation inflow. The analysis of macrofaunal communities associated with two shallow, isolated glacial coves was performed in Admiralty Bay (King George Island) and compared with non-disturbed sites. Multivariate analyses (hierarchical classification, nMDS) clearly separated glacial cove communities (two assemblages) from the sites situated outside both basins (two assemblages). The community influenced by the streamflow of glacial discharge of meltwater situated in the area with sandy–clay–silt sediments had a very low species richness, diversity and abundance. It was dominated by eurytopic, motile deposit feeding polychaetes such as Mesospio moorei, Tharyx cincinnatus and Leitoscoloplos kerguelensis as well as the bivalve Yoldia eightsi. The second glacial community of the area located at a grater distance from the outlet of the stream was characterized by sandy–clay–silt and clay–silt deposits and showed also a low diversity and species richness. The most abundant here were peracarid crustaceans, with the dominant opportunistic feeder Cheirimedon femoratus. Community from the non-disturbed area with silty–clay–sand, and silty–sand sediments had higher species richness and diversity. The assemblage of fauna from the sandy bottom has values of those two indexes similar to those found in the disturbed areas.