Microbial Colonization of Beech and Spruce Litter—Influence of Decomposition Site and Plant Litter Species on the Diversity of Microbial Community

The present study was conducted to investigate the effect of decomposition site and plant litter species on the colonizing microbial communities. For this, litter bag technique using beech and spruce litter was combined with RNA-based fingerprinting and cloning. Litter bags were incubated for 2 and 8 weeks in the A_h horizon of beech and beech–spruce mixed forest sites. Although sugars and starch were rapidly lost, lignin content increased by more than 40% for beech and more than doubled for spruce litter at both soil sites at the end of the experiment. Denaturing gradient gel electrophoresis analysis of 16S and 18S rRNA RT–PCR products was used for screening of differences between bacterial and fungal communities colonizing the two litter types. Development of the microbial community over time was observed to be specific for each litter type and decomposition site. RT–PCR products from both litter types incubated in beech–spruce mixed forest site were also cloned to identify the bacterial and fungal colonizers. The 16S rRNA clone libraries of beech litter were dominated by γ-proteobacterial members, whereas spruce libraries were mainly composed of α-, β-, and γ-proteobacterial members. Ascomycota members dominated the 18S rRNA clone libraries. Clones similar to Zygomycota were absent from spruce, whereas those similar to Basidiomycota and Glomeromycota were absent from beech libraries. Selective effects of litter quality were observed after 8 weeks. The study provides an insight into the bacterial and fungal communities colonizing beech and spruce litter, and the importance of litter quality and decomposition site as key factors in their development and succession.     

Greater accumulation of litter in spruce (Picea abies) compared to beech (Fagus sylvatica) stands is not a consequence of the inherent recalcitrance of needles

Background and aims

Replacement of beech by spruce is associated with changes in soil acidity, soil structure and humus form, which are commonly ascribed to the recalcitrance of spruce needles. It is of practical relevance to know how much beech must be admixed to pure spruce stands in order to increase litter decomposition and associated nutrient cycling. We addressed the impact of tree species mixture within forest stands and within litter on mass loss and nutritional release from litter.

Methods

Litter decomposition was measured in three adjacent stands of pure spruce (Picea abies), mixed beech-spruce and pure beech (Fagus sylvatica) on three nutrient-rich sites and three nutrient-poor sites over a three-year period using the litterbag method (single species and mixed species bags).

Results

Mass loss of beech litter was not higher than mass loss of spruce litter. Mass loss and nutrient release were not affected by litter mixing. Litter decay indicated non-additive patterns, since similar remaining masses under pure beech (47%) and mixed beech-spruce (48%) were significantly lower than under pure spruce stands (67%). Release of the main components of the organic substance (C_org, N_tot, P, S, lignin) and associated K were related to mass loss, while release of other nutrients was not related to mass loss.

Conclusions

In contradiction to the widely held assumption of slow decomposition of spruce needles, we conclude that accumulation of litter in spruce stands is not caused by recalcitrance of spruce needles to decay; rather adverse environmental conditions in spruce stands retard decomposition. Mixed beech-spruce stands appear to be as effective as pure beech stands in counteracting these adverse conditions.     

The soil fauna community in pure and mixed stands of beech and spruce of different age: trophic structure and structuring forces

This study investigates the response of the soil fauna community to replacement of beech by spruce or by mixed stands of beech and spruce. Stands of different age were investigated in a factorial design with the factors tree species (beech and spruce) and stand age (30 and 120 yr). The input of leaf/needle litter did not differ significantly between the study sites. By contrast, the amount of organic matter in upper soil layers (L/F, H/Ah) of spruce forests strongly exceeded that of beech forests particularly in mature stands. The increase in organic matter in spruce stands was not associated by an increase in the amount of microbial biomass. Biomass of eight (bacterivorous, fungivorous and omnivorous nematodes, enchytraeids, earthworms, isopodes, mycetophilid and cecidomyiid Diptera) of the twelve microbi‐detritivorous soil animal groups studied was significantly increased in beech forests; only that of one group (elaterid beetles) was increased in spruce forests and three groups did not respond significantly (collembolans, oribatid mites, sciarid Diptera). This indicates that in the forests studied neither habitat space (amount of organic matter in L/F and H/Ah layers) nor the amount of microbial biomass controlled microbi‐detritivores. Rather, the quality of litter materials and the concentration of microbial biomass therein appeared to be most important. Herbivores and predators also were favoured by beech: the biomass of one (rhizophagous nematodes) of the three herbivorous groups studied were significantly increased in beech stands and none in spruce stands; the biomass of four (predatory nematodes, centipedes, carabid and cantharid beetles) of the seven carnivorous groups studied were increased in beech stands, none in spruce stands. Generally, the biomass ratio between prey and predators was at a minimum in mature beech and mixed stands indicating more intense top‐down control in these forests. Overall, the study documents that replacement of beech by spruce strongly alters the soil food web. Mixed stands were more similar to spruce stands in respect to the biomass of soil animal groups but predator–prey interactions appeared to be more similar in mature beech and mixed stands. Differences between tree species usually were more pronounced in 120 compared to 30 yr old stands indicating that the development of stand characteristics is slow.     

Effect of available P and phenolics on mineral N release in acidified spruce forest: connection with lignin-degrading enzymes and bacterial and fungal communities

We conducted over four months a short-term laboratory incubation experiment to find the best prediction parameters (i.e. initial chemical characteristics) to explain differences in microbial respiration rates and mineral N (DIN) release in different litter in an acidified spruce forest. In addition, we wanted to find the link between the activity of key extracellular ligninolytic enzymes, phenoloxidases (PhOx) and peroxidases (Perox), microbial respiration and composition of fungal and bacterial communities. Samples of spruce needles (Picea abies) and litter of four dominant understorey vegetation; lady fern (Athyrium alpestre), blueberry (Vaccinium myrtillus), reedgrass (Calamagrostis villosa) and hair grass (Avenella flexuosa), were collected in 2005, 2006 and 2007 from six sites located in watersheds of two glacial lakes (Plesne Lake and Certovo Lake) in the Bohemian Forest, Czech Republic. Litter samples were incubated at 0 and 10 °C in laboratory controlled conditions for 90 days. Activities of PhOx and PerOx, and C mineralization rate were measured regularly each 14 days. Litter quality characteristics and endophytic microbial community structure, based on 16SrDNA-DGGE fingerprint of bacteria and ITS-DGGE of fungi, were determined at the beginning and end of litter incubation. Our results showed a close correlation of phenolics/P_OX with DIN release (r > 0.74, p < 0.001). Using multivariate analyses, P_OX seems to play an important role in the change of litter fungal and bacterial community composition. At 0 °C the fungal and bacterial communities of reedgrass and blueberry litter changed in relation to P_OX and Perox activity, while at 10 °C the fungal communities after the incubation were additionally affected by the phenolics/N_TOT and phenolics/P_TOT ratios.     

凋落物分解过程中土壤微生物群落的变化

凋落物分解是生态系统碳循环和营养物质循环的关键过程, 受多种因素共同影响。土壤微生物是影响凋落物分解的重要因素, 其群落组成在一定程度上依赖于所处植物群落的特征。因此, 研究分解过程中微生物群落组成的变化及其对植物多样性的响应, 有利于对凋落物分解机制的理解。本文采用分解袋野外原位分解的方法, 对凋落物分解过程中微生物群落的变化及其对所处森林环境中树木的种类和遗传多样性的响应进行了研究。结果表明: (1)凋落物分解183天后, 土壤中微生物群落的多样性降低, 并且森林群落的物种多样性与微生物群落多样性呈负相关关系; (2)凋落物分解前后, 土壤中真菌和细菌群落的磷脂脂肪酸(PLFA)量均有所增加, 说明凋落物分解为微生物生存和繁殖提供了养分; (3)地形因素是影响微生物群落变化最显著的因素, 可解释微生物群落变化的29.55%; 其次是凋落物的基质质量, 可以解释15.39%; 最后是森林群落的多样性, 可以解释8.45%; 这3种因素共同解释率为2.97%。综上所述, 与森林群落的植物多样性相比, 样地的地形因素与凋落物的基质质量对微生物群落的影响更显著。     

Isopod effects on decomposition of litter produced under elevated CO2, N deposition and different soil types

The performance of Oniscus asellus (Isopoda) and its influence on litter mass loss and mineralization was assessed in a microcosm experiment, using beech (Fagus sylvatica) leaf litter that was produced on different soil types, contrasting atmospheric CO₂ concentrations, and different nitrogen deposition rates. Litter quality was significantly altered by these treatments, and many of the CO₂ and N effects differed between soil types. Litter quality affected subsequent litter mass loss rates, microbial respiration, and leaching of dissolved organic carbon (DOC) and nitrate. These effects were largely independent of the presence of isopods, even though isopods highly accelerated litter mass loss, stimulated microbial respiration by 37%, and increased nitrate leaching by 50%. Isopods did not change their relative rates of litter consumption and growth in response to litter quality. Isopod mortality, however, increased with increasing litter lignin/N ratios, and was significantly different between soil types, which may indicate long‐term effects on litter decomposition through altered isopod densities. Having the choice among the litter of three different species [maple (Acer pseudoplatanus), beech (Fagus sylvatica) and oak (Quercus robur)] grown at either ambient or elevated CO₂, isopods preferred maple to beech when all the litter was produced under elevated CO₂. This suggests that beyond changes in consumption, an altered food selection by isopods in a CO₂‐enriched atmosphere may affect the temporal and spatial composition of the litter layer in temperate forests. In contrast to previous findings, we conclude that isopods do not always increase their consumption rates, and hence do not differentially affect microbial decomposition in litter of poorer quality. Nevertheless changes in animal densities and/or shifts in their food preferences, could result in altered decomposition and carbon and nutrient turnover rates.     

Changes in the decomposer community when converting spruce monocultures to mixed spruce/beech stands

The impact of the admixture of beech in spruce monocultures on structure and function of the decomposer community was studies in the Ore mountains (Saxony, Germany) on Dystric Cambisols between 2000 and 2002. The study sites represented four stages of forest conversion from a mature spruce stand to a mature spruce/beech stand. There, the functional profile of the nematodes, enchytraeids, lumbricids, and dipterans was analysed on the basis of ecological guilds, and their metabolic equivalences were calculated to characterize the decomposition potential of the invertebrate decomposer community. Because of the acidic parent soil the coenoses at all study sites were dominated by the enchytraeids with increasing importance of lumbricids and dipterans in progress of forest conversion. Gradual changes with rising coverage of beech culminated in intense differences of entire biomasses and metabolic equivalences between the mature stands, indicating a higher decomposition potential of the invertebrate decomposer community by the admixture of beeches in spruce forests. The quality of the beech litter is likely to be the important factors for these changes. To prove this assumption further investigations of the saprovore food chain are necessary, taking microbial parameters into account.     

Contribution of litter layer to soil greenhouse gas emissions in a temperate beech forest

Background and aims

The litter layer is a major source of CO₂, and it also influences soil-atmosphere exchange of N₂O and CH₄. So far, it is not clear how much of soil greenhouse gas (GHG) emission derives from the litter layer itself or is litter-induced. The present study investigates how the litter layer controls soil GHG fluxes and microbial decomposer communities in a temperate beech forest.

Methods

We removed the litter layer in an Austrian beech forest and studied responses of soil CO₂, CH₄ and N₂O fluxes and the microbial community via phospholipid fatty acids (PLFA). Soil GHG fluxes were determined with static chambers on 22 occasions from July 2012 to February 2013, and soil samples collected at 8 sampling events.

Results

Litter removal reduced CO₂ emissions by 30 % and increased temperature sensitivity (Q₁₀) of CO₂ fluxes. Diffusion of CH₄ into soil was facilitated by litter removal and CH₄ uptake increased by 16 %. This effect was strongest in autumn and winter when soil moisture was high. Soils without litter turned from net N₂O sources to slight N₂O sinks because N₂O emissions peaked after rain events in summer and autumn, which was not the case in litter-removal plots. Microbial composition was only transiently affected by litter removal but strongly influenced by seasonality.

Conclusions

Litter layers must be considered in calculating forest GHG budgets, and their influence on temperature sensitivity of soil GHG fluxes taken into account for future climate scenarios.

     

Microbial Diversity During Cellulose Decomposition in Different Forest Stands: I. Microbial Communities and Environmental Conditions

We studied the effect of forest tree species on a community of decomposers that colonize cellulose strips. Both fungal and bacterial communities were targeted in a native forest dominated by beech and oak and 30-year-old beech and spruce plantations, growing in similar ecological conditions in the Breuil-Chenue experimental forest site in Morvan (France). Microbial ingrowths from the 3rd to 10th month of strip decomposition (May to December 2004) were studied. Community composition was assessed using temperature gradient gel electrophoresis with universal fungal (ITS1F, ITS2) and bacterial (1401r, 968f) primers. Soil temperature and moisture as well as fungal biomass were also measured to give additional information on decomposition processes. Changing the dominant tree species had no significant influence in the number of decomposer species. However, decomposer community composition was clearly different. If compared to the native forest, where community composition highly differed, young monocultures displayed similar species structure for fungi and bacteria. Both species numbers and community composition evolved during the decay process. Time effect was found to be more important than tree species. Nevertheless, the actual environmental conditions and seasonal effect seemed to be even more determining factors for the development of microbial communities. The course and correlations of the explored variables often differed between tree species, although certain general trends were identified. Fungal biomass was high in summer, despite that species richness (SR) decreased and conversely, that high SR did not necessarily mean high biomass values. It can be concluded that the growth and development of the microbiological communities that colonized a model material in situ depended on the combination of physical and biological factors acting collectively and interdependently at the forest soil microsite.     

Soil microbial communities adapt to genetic variation in leaf litter inputs

Plant genotypes can have important community‐ and ecosystem‐level effects. However, whether the extended phenotypes of plants feed back to influence the fitness of causal genotypes through soil processes remains unknown. We investigated whether aspen genotypes create distinct soil microbial communities that could potentially affect plant fitness. Using naturally occurring aspen stands in an old‐field system, we set up reciprocal litter transplants among ten genetically distinct aspen clones and tracked decomposition and changes in belowground nutrients and microbial communities for three years. We found that belowground microbial communities became adapted to process specific genotypes of aspen litter to the extent allowable by environment and litter chemistry. Belowground processes were driven by a combination of little quality and prior exposure to specific genotypes of litter. In general, litter from aspen genotypes native to the soil community decomposed more rapidly than did litter from foreign aspen genotypes (i.e. a home‐field advantage existed). While home‐field advantages have been documented to occur among litters of different species, we show that intraspecific variation can elicit similar, albeit weak, effects within a single species. Because rapid decomposition and nutrient cycling is likely to benefit fast‐growing, early‐successional species such as aspen, genotype‐mediated selection for soil microbial communities may feed back to positively affect plant fitness. In addition, belowground communities exhibited significant shifts in response to leaf litter inputs. When exposed to foreign litter, microbial communities changed to become more similar to the microbial community beneath the foreign litter's origin, indicating that belowground microbial communities are predictable given the genotype of the aboveground aspen clone.     

Effects of Transgenic Hybrid Aspen Overexpressing Polyphenol Oxidase on Rhizosphere Diversity

This study assessed the potential effects of transgenic aspen overexpressing a polyphenol oxidase gene on diversity in rhizosphere communities. Cultivation-independent methods were used to better delineate bacterial and fungal populations associated with transgenic and nontransgenic trees. Gene libraries for the bacterial component of the rhizosphere were established using 16S rRNA and chaperonin-60 (CPN-60) gene sequences, while the fungal community was characterized using 18S rRNA gene sequences. The 16S rRNA gene libraries were dominated by alphaproteobacterial sequences, while the CPN-60 gene libraries were dominated by members of the Bacteroidetes/Chlorobi group. In both the CPN-60 and 16S rRNA libraries, there were differences in only minor components of the bacterial community between transgenic and unmodified trees, and no significant differences in species diversity were observed. Compared to the bacterial gene libraries, greater coverage of the underlying population was achieved with the fungal 18S rRNA libraries. Members of the Zygomycota, Chytridiomycota, Ascomycota, and Basidiomycota were recovered from both libraries. The dominant groups of fungi associated with each tree type were very similar, although there were some qualitative differences in the recovery of less-abundant fungi, likely as a result of the underlying heterogeneity of the fungal population. The methods employed revealed only minor differences between the bacterial and fungal communities associated with transgenic and unmodified trees.     

Season mediates herbivore effects on litter and soil microbial abundance and activity in a semi-arid woodland

Herbivores can directly impact ecosystem function by altering litter quality of an ecosystem or indirectly by shifting the composition of microbial communities that mediate nutrient processes. We examined the effects of tree susceptibility and resistance to herbivory on litter microarthropod and soil microbial communities to test the general hypothesis that herbivore driven changes in litter inputs and soil microclimate will feedback to the microbial community. Our study population consisted of individual piñon pine trees that were either susceptible or resistant to the stem-boring moth (Dioryctria albovittella) and susceptible piñon pine trees from which the moth herbivores have been manually removed since 1982. Moth herbivory increased piñon litter nitrogen concentrations (16%) and decreased canopy precipitation interception (28%), both potentially significant factors influencing litter and soil microbial communities. Our research resulted in three major findings: (1) In spite of an apparent increase in litter quality, herbivory did not change litter microarthropod abundance or species richness. (2) However, susceptibility to herbivores strongly influenced bulk soil microbial communities (i.e., 52% greater abundance beneath herbivore-resistant and herbivore-removal trees than susceptible trees) and alkaline phosphatase activity (i.e., 412% increase beneath susceptible trees relative to other groups). (3) Season had a strong influence on microbial communities (i.e., microbial biomass and alkaline phosphatase activity increased after the summer rains), and their response to herbivore inputs, in this semi-arid ecosystem. Thus, during the dry season plant resistance and susceptibility to a common insect herbivore had little or no observable effects on the belowground organisms and processes we studied, but after the rains, some pronounced effects emerged.     

Enhanced ozone exposure of European beech (Fagus sylvatica) stimulates nitrogen mobilization from leaf litter and nitrogen accumulation in the soil

Abstract

In a lysimeter study with young beech trees, the effects of elevated ozone concentration on the decomposition and fate of nitrogen in ¹⁵N‐labeled leaf litter were analyzed after one growing season. Nitrogen in the litter was dominated by a relatively inert, residual fraction, but easily decomposable nitrogen was present in substantial amounts. Nitrogen loss was significantly higher at twice‐ambient ozone which was largely attributed to an enhanced mobilization of residual nitrogen. Enhanced mobilization of nitrogen from litter at twice‐ambient ozone exposure resulted in additional ¹⁵N incorporation into the soil down to 30 cm depth. Only 0.41–0.62% of the nitrogen in the litter was incorporated into plant material at both ozone concentrations. Twice‐ambient ozone exposure changed the distribution of the nitrogen taken up from litter inside the beech trees in favor of the shoot, where it may have been used in biosynthetic processes required for defense reactions.     

Early stage litter decomposition rates for Swiss forests

The decomposition of belowground and aboveground tree litter was studied on five forest sites across Switzerland, ranging from 480 to 1500 m in altitude, and including calcareous and acidic soils. In addition to decomposition of local litter types (Picea abies, Fagus sylvatica, Castanea sativa), the decomposition of a standard beech litter was studied on all sites. After 2 years of decomposition, mass loss ranged from 18 to 71% across the different sites and litter types. The lowest decomposition rates were observed for beech roots, while mass loss was greatest for both spruce needles and spruce roots at the low-altitude site. Mass loss during the first winter correlated best with the content of water-soluble substances. After 1 year of incubation, mass loss of the standard litter varied less than did mass loss of local litter, but variance increased during the second year for aboveground litter. These observations indicate a smaller climatic influence on litter breakdown at the beginning of the decomposition process. Litter mass loss could be described using an exponential model with a decay constant depending on either lignin/N ratio or Mn content of the litter and annual soil temperature and throughfall precipitation as climatic variables. Modelling the observed mass loss indicated a strong influence of litter quality in the first 2 years of decomposition, confirming the field data from the standard litter experiment. The experiment will continue for some years and is expected to yield additional data on long-term decomposition.     

Microbial communities may modify how litter quality affects potential decomposition rates as tree species migrate

Background and aims

Climate change alters regional plant species distributions, creating new combinations of litter species and soil communities. Biogeographic patterns in microbial communities relate to dissimilarity in microbial community function, meaning novel litters to communities may decompose differently than predicted from their chemical composition. Therefore, the effect of a litter species in the biogeochemical cycle of its current environment may not predict patterns after migration. Under a tree migration sequence we test whether litter quality alone drives litter decomposition, or whether soil communities modify quality effects.

Methods

Litter and soils were sampled across an elevation gradient of different overstory species where lower elevation species are predicted to migrate upslope. We use a common garden, laboratory microcosm design (soil community x litter environment) with single and mixed-species litters.

Results

We find significant litter quality and microbial community effects (P?<?0.001), explaining 47 % of the variation in decomposition for mixed-litters.

Conclusion

Soil community effects are driven by the functional breadth, or historical exposure, of the microbial communities, resulting in lower decomposition of litters inoculated with upslope communities. The litter x soil community interaction suggests that litter decomposition rates in forests of changing tree species composition will be a product of both litter quality and the recipient soil community.     

Characterisation of culture-independent and -dependent microbial communities in a high-temperature offshore chalk petroleum reservoir

Recent studies have indicated that oil reservoirs harbour diverse microbial communities. Culture-dependent and culture-independent methods were used to evaluate the microbial diversity in produced water samples of the Ekofisk oil field, a high temperature, and fractured chalk reservoir in the North Sea. DGGE analyses of 16S rRNA gene fragments were used to assess the microbial diversity of both archaeal and bacterial communities in produced water samples and enrichment cultures from 4 different wells (B-08, X-08, X-18 and X-25). Low diversity communities were found when 16S rDNA libraries of bacterial and archaeal assemblages were generated from total community DNA obtained from produced water samples and enrichment cultures. Sequence analysis of the clones indicated close matches to microbes associated with high-temperature oil reservoirs or other similar environments. Sequences were found to be similar to members of the genera Thermotoga, Caminicella, Thermoanaerobacter, Archaeoglobus, Thermococcus, and Methanobulbus. Enrichment cultures obtained from the produced water samples were dominated by sheathed rods. Sequence analyses of the cultures indicated predominance of the genera Petrotoga, Arcobacter, Archaeoglobus and Thermococcus. The communities of both produced water and enrichment cultures appeared to be dominated by thermophilic fermenters capable of reducing sulphur compounds. These results suggest that the biochemical processes in the Ekofisk chalk reservoir are similar to those observed in high-temperature sandstone reservoirs.     

Fungal endophyte‐infected leaf litter alters in‐stream microbial communities and negatively influences aquatic fungal sporulation

Endophytes are ubiquitous plant‐associated microbes and although they have the potential to alter the decomposition of infected leaf litter, this has not been well‐studied. The endophyte Rhytisma punctatum infects the leaves of Acer macrophyllum (bigleaf maple), causing the appearance of black ‘tar spots’ that persist in senesced leaves. Other foliar fungi also cause visible damage in healthy tissues of this host plant system including an unidentified bullseye‐shaped lesion, common in western Washington. Using three treatments of endophyte infection status in leaf tissue (R. punctatum‐infected, bullseye‐infected, lesion‐free), leaf litter discs were submerged in a third‐order temperate stream using mesh litter bags and harvested periodically over two months to determine the effects of litter treatment and incubation time on litter mass loss, fungal sporulation, and microbial community colonization. Litter containing symptomatic endophyte infections (Rhytisma or bullseye) had reduced sporulation of aquatic hyphomycetes, but decomposed significantly faster than lesion‐free or bullseye‐infected litter. Using amplicon‐based sequencing, we found a significant difference in bacterial communities colonizing Rhytisma‐infected and bullseye‐infected leaf litter, a significant difference in fungal communities colonizing Rhytisma‐infected leaf litter compared to the two other treatments, and a change in both community structure and relative abundances of bacterial and fungal taxa throughout the study period. Indicator Species Analysis clarified the drivers of these community shifts at the genus level. Our results show that endophyte‐associated, in‐stream sporulation and microbial community effects are observable within one species of leaf litter.     

Fungi Vectored by the Bark Beetle Ips typographus Following Hibernation Under the Bark of Standing Trees and in the Forest Litter

The bark beetle Ips typographus has different hibernation environments, under the bark of standing trees or in the forest litter, which is likely to affect the beetle-associated fungal flora. We isolated fungi from beetles, standing I. typographus-attacked trees, and forest litter below the attacked trees. Fungal identification was done using cultural and molecular methods. The results of the two methods in detecting fungal species were compared. Fungal communities associated with I. typographus differed considerably depending on the hibernation environment. In addition to seven taxa of known ophiostomoid I. typographus-associated fungi, we detected 18 ascomycetes and anamorphic fungi, five wood-decaying basidomycetes, 11 yeasts, and four zygomycetes. Of those, 14 fungal taxa were detected exclusively from beetles that hibernated under bark, and six taxa were detected exclusively from beetles hibernating in forest litter. The spruce pathogen, Ceratocystis polonica, was detected occasionally in bark, while another spruce pathogen, Grosmannia europhioides, was detected more often from beetles hibernating under the bark as compared to litter. The identification method had a significant impact on which taxa were detected. Rapidly growing fungal taxa, e.g. Penicillium, Trichoderma, and Ophiostoma, dominated pure culture isolations; while yeasts dominated the communities detected using molecular methods. The study also demonstrated low frequencies of tree pathogenic fungi carried by I. typographus during its outbreaks and that the beetle does not require them to successfully attack and kill trees.     

Changes in diversity and storage function of ectomycorrhiza and soil organoprofile dynamics after introduction of beech into Scots pine forests

Diversity and storage function of mycorrhiza as well as soil organoprofile formation were investigated in a chronosequence of a pure Scots pine (Pinus sylvestris L.) stand, of Scots pine stands that were underplanted with beech (Fagus sylvatica L.) and in three pure beech stands of different age. Mycorrhiza diversity was higher in the pure beech stands compared to the pure pine stand. Beech and pine trees in the mixed stands had similar dominant mycorrhiza morphotypes. However, trees in two of the three pure beech stands were mycorrhized with other types. Mycorrhizal abundance and nutrient amounts of mycorrhizae associated with beech trees were higher in the mixed and in the pure beech stands compared to pine mycorrhizae indicating that nutrient uptake was higher in older beech than in older pine trees. Humus quality varied from pine to beech stands. Plant litter storage in the humus layer was highest in the youngest mixed stand and lowest in the oldest beech stand. Humus forms changed from moder grass-type in the pure Scots pine stand to mor-like moder and moder rich in fine humus with increasing age of beeches in the mixed stands. The older beech stands were characterised by oligomull and mull-like moder as the dominating humus forms. The ecologically favourable humus forms, i.e., nutrient rich humus forms in the older beech stands correlate well with the higher mycorrhizal diversity and abundance as well as the higher nutrient storage of their mycorrhizae in these stands. The results are also discussed with regard to the 'base-pump effect' of beech trees.     

Effects of grassland species on decomposition of litter and soil microbial communities

Decomposition of litter is greatly influenced not only by its chemical composition but also by activities of soil decomposers. By using leaf litter from 15 plant species collected from semi-natural and improved grasslands, we examined (1) how interspecific differences in the chemical composition of litter influence the abundance and composition of soil bacterial and fungal communities and (2) how such changes in microbial communities are related to the processes of decomposition. The litter from each species was incubated in soil of a standard composition for 60 days under controlled conditions. After incubation, the structure of bacterial and fungal communities in the soil was examined using phospholipid fatty-acid analysis and denaturing gradient gel electrophoresis. Species from improved grasslands had significantly higher rates of nitrogen mineralization and decomposition than those from semi-natural grasslands because the former were richer in nitrogen. Litter from improved grasslands was also richer in Gram-positive bacteria, whereas that from semi-natural grasslands was richer in actinomycetes and fungi. Nitrogen content of litter also influenced the composition of the fungal community. Changes in the composition of both bacterial and fungal communities were closely related to the rate of litter decomposition. These results suggest that plant species greatly influence litter decomposition not only through influencing the quality of substrate but also through changing the composition of soil microbial communities.