分离自蔬菜地的腐霉一新种及其rDNAITS序列分析(英文)

从广西南宁收集的蔬菜地土壤样本中,分离得到一个新的腐霉种,命名为广西腐霉Pythium guangxiense。不同于其近似种,广西腐霉的孢子囊球形或亚球形;藏卵器球形、亚球形、椭圆形或囊形;雄器同丝生或异丝生,柄常分枝且缠绕藏卵器。对构成广西腐霉rDNAITS区段的772个碱基进行扩增和测序。在根据ITS序列建立的分子系统发育树中,广西腐霉与禾生腐霉Pythium graminicola、周雄腐霉P.periilum和肿囊腐霉P.inflatum等产生瓣状孢子囊的腐霉种关系密切。对广西腐霉进行了分类描述和其与近似种的比较。     

中国大陆的腐霉属菌物

综述了中国大陆腐霉属的研究进展,内容包括腐霉属菌物的发生、分布、分类鉴定、致病性、所致植物病害防治及腐霉的利用等方面.至今,中国已报道的腐霉属菌物有64个种,其中有13个种作为世界新种进行了描述,这13个新种分别为:顶生腐霉Pythium acrogynum,孤雌腐霉P.amasculinum,百色腐霉P.baisense,北方腐霉P.boreale,短枝腐霉P.breve,壁合腐霉P.connatum,镰雄腐霉P.falciforme,贵阳腐霉P.guiyangense,广西腐霉P.guangxiense,下雄腐霉P.hypoandrum,昆明腐霉P.kummingense,南宁腐霉尸nanningense和中国腐霉P.sinensis.瓜果腐霉Pythium aphanidermatum为优势种,在全国普遍引起多种植物严重的猝倒病和根、茎、叶、果腐烂病.其中,大多数腐霉种对植物具有致病性,44个种寄生植物,1个种:紫菜腐霉P.porphyrae寄生红藻和紫菜,2个种:卡地腐霉P.carolinianum 和贵阳腐霉P.guiyangense寄生蚊子幼虫,2个种:努氏腐霉P.nunn和寡雄腐霉P.oligandrum 是真菌的重寄生菌.相比之下,台湾报道的腐霉种有48种(其中新种1个:四季腐霉P.sukuiense),海南报道的腐霉种有28种.对中国大陆腐霉属的研究前景也进行了讨论.     

云南的腐霉

本文报道迄今为止在我国云南省发现的腐霉属真菌19个种,其中1个新种,3个中国新记录,5个云南新记录。新种为下雄腐霉Pythium hypoandrum Yu ＆ Y.L.Wang sp.nov.; 云南新记录为:旋柄腐霉P.helicoides、长井腐霉P.nagaii、周雄腐霉P.periilum、喙腐霉P.rostratum和钟器腐霉P.vexans,前3者还是中国新记录。有分种检索表,对其中12个种进行了描述并附形态图。     

中国腐霉属的生态和分布

腐霉属PytMum真菌全世界已报道约100种。本文记载我国的腐霉45种,以及它们的生态及地理分布。腐霉喜栖息于富含有机质的潮湿土壤里,以菜园土中为最多,其次是大田土、水畔土和陵园土,干旱的沙质土、森林土和含盐碱的沼泽土一般均较少,最贫乏的是草丘土,如草原、牧场、山坡、荒丘及道旁等土壤。在我国的土壤中,以绚丽腐霉P．Pulchrum和瓜果腐霉P. aphanidermatum最为常见,其次是刺腐霉Spinosum、中国腐霉P．Sinense和卡地腐霉P. carolinianum,而顶生腐霉P．Acrogenum、色孢腐霉P．Coloratum、壁台腐霉P connatura等10个种却较罕见,仅出现过一次。腐霉在土壤中的垂直分布以5—10㈨深处为最多。腐霉在土壤中的活动有着明显的季节性变化：春季最多,秋季次之,夏季最少。在我国的30个省市自治区中,北京发现的腐霉最多,已报道22种;河北、广东、云南省次之,各有13种;台湾省已记录12个种;山西省、甘肃省和新疆维吾尔自治区均仅发现一个种;而青海省、宁夏回族自治区和西藏自治区迄今尚未见有腐霉报道。     

基于rDNA ITS序列探讨部分腐霉种的系统发育与其形态特征

基于对73株计58种腐霉和6种疫霉的核糖体DNA的ITS序列分析,以海生疫霉为外围群,按邻接法构建系统发育树,对腐霉的系统发育关系进行了研究。结果表明:在58种腐霉中,Pythium ostracodes,P.chamaehyphon,P.carbonicum,P.montanum和P.vexans归为同一组,介于其它腐霉和疫霉之间,这5种腐霉的孢子囊均为球形;现已归为疫霉属的P.undulatum 单独为一组,它与腐霉的亲缘关系比疫霉更近;其余52种腐霉聚成一大组,这52种腐霉基本上按孢子囊或菌丝膨大体形态分成Ⅰ、Ⅱ两组:第1组31种腐霉, 其中30种腐霉的孢子囊或菌丝膨大体为球形;第Ⅱ组21种腐霉,其中19种腐霉的孢子囊为丝状、瓣状或裂片状。基于ITS序列分析,腐霉属的其它性状如藏卵器壁是否光滑、卵孢子是否满器、雄器的着生方式和数量、异宗配合等呈多元演化。     

新近从宁夏分离的腐霉

到现在为止全世界已发现loo余种腐霉。我国已报道54种。在我国31个省、市自治区中,仅宁夏和西藏2个自治区未见报道过腐霉。最近我们从宁夏回族自治区土壤和植物病根用多种方法进行分离,得到259株,鉴定出10个种。它们是:瓜果腐霉Pythium aphanidermatum (Edson) Fitzpatrick、链状腐霉P. catenulatum Matthews、畸雌腐霉P. irregulare Buisman、寡雄腐霉P. oligandrum Drechsler、侧雄腐霉P.paroecandrum Drechsler,缠器腐霉P. periplocum Drechsler、无序腐霉P. perplexum Kouyeas & Theohari、角柄腐霉P. salpingophocum DrechsIer、终极腐霉P. ultimum Trow和钟器腐霉P. vexans de Bary。它们全是宁夏地区新记录种。其中无序腐霉还是我国新记录种。本文仅描述了无序腐霉,对其余9个种进行了讨论.有些种类除从土壤中分离到以外,还见于一些寄主植物:大葱Allium fistulosum L.、韭葱A. juncea L.、芹菜Apium-graveolens L.、油菜Brassica campestris L.、雪里蒸B. juncea (L.) Czern et Coss var.crispifolia Bailey白菜B. pekinensis Rupr.、辣椒Capsicum frutescens L.、胡萝卜Daucuscarota L. var.saliva DC.、草每Fragaria ananassa Duchesne、番茄esculentum Mill.、菜豆Phaseolus vulgaris L.和萝卜Raphanus sativus L.。以“腐霉名称:寄主名称”的格式列出如后:瓜果腐霉:胡萝卜;链状腐霉:胡萝卜;寡雄腐霉:白菜和辣椒;侧雄腐霉:大葱、芹菜和白菜;缠器腐霉:韭葱;终极腐霉:大葱、韭葱、油菜、雪里蕻、白菜、辣椒、胡萝卜、草墓、番茄、菜豆和萝卜。在我国,这些腐霉从前述寄主上分离出均属首次报道。     

腐霉属的两个新种*

新种镰雄腐霉Pythium falciforme sp. nov.和南宁腐霉P. nanningense sp. nov.分离自中国广西地区土壤。新种提供了拉丁文、中文描述和形态图,并讨论。模式标本保藏于广西大学植物病理教研室(GUPL)。     

腐霉属的两个新种

新种镰雄腐霉 Pythium fatciforme sp.nov.和南宁腐霉 P.nanningense sp.nov.分离自中国广西地区土壤。新种提供了拉丁文、中文描述和形态图,并讨论。模式标本保藏于广西大学植物病理教研室(GUPL)。     

PYTHIUM SYLVATICUM鉴定及其专一性PCR引物

从杭州采集的水稻、棉花和大豆猝倒苗中分离到国内新记录腐霉种Pythium sylvaticum。该腐霉为异宗配合种,菌丝膨大体球形或柠檬形,雄器异丝生,藏卵器光滑,每个藏卵器上1~3个雄器,雄器常在接近藏卵器处形成二叉状分枝,卵孢子不满器。测定了该种4 个菌株的核糖体内转录间隔区(ITS)的序列,根据与59种腐霉ITS序列的比较,设计了P. sylvaticum种专一性引物PSF1和PSR2。实际结果表明:该引物能从11种共14株腐霉DNA中特异性地扩增P. sylvaticum,从而与其它10种腐霉区分。     

腐霉属三个中国新记录种(英文)

通过对分离自中国土壤中的腐霉菌进行形态特征和DNA序列分析,发现3个中国新记录种:钟形腐霉Pythium campanulatum、卵突腐霉P. oopapillum和多卵腐霉 P. plurisporium。根据采集材料对其进行了形态学特征描述和图解,研究标本保存于中国科学院微生物研究所菌物标本馆(HMAS)。     

Two new species of Pythium, P. schmitthenneri and P. selbyi pathogens of corn and soybean in Ohio

Two new species of Pythium, pathogens of corn and soybean in Ohio, are described. Pythium schmitthenneri sp. nov. and Pythium selbyi sp. nov. both have morphological and sequence characteristics that place them in clade E1 of the genus Pythium. Morphology and sequence analysis of the ITS1-5.8S-ITS2 regions of these species were different from previously described species. The ITS region of Pythium schmitthenneri was 99.9% similar to P. acrogynum and 99.8% similar to P. hypogynum. All three species are characterized by globose to limoniform sporangia and plerotic oospores. Pythium schmitthenneri has mostly diclinous antheridia, compared to the strictly hypogynous antheridia of P. acrogynum and P. hypogynum. The temperature for growth of P. schmitthenneri is below 4 C to 32 C, and optimum growth is 18-25 C compared to 31-34 C for P. hypogynum. The ITS region of P. selbyi was 97.1% similar to P. longandrum and 97.5% similar to P. longisporangium. All three species are characterized by globose sporangia, mostly plerotic oospores, with one to two oospores per oogonium, and hypogynous or monoclinous antheridia. The temperature for growth of P. selbyi is below 4 to 32 C, with an optimum 18-25 C. These new species were widely dispersed throughout the soybean- and corn-producing regions in Ohio, making their characterization critical for managing the Pythium complex that causes seedling and root-rot disease in Ohio soybean and corn fields.     

ITS region of the rDNA of Pythium longandrum, a new species; its taxonomy and its comparison with related species

Pythium longandrum (F-73.0) was isolated, from soil samples taken in Lille in northern France. Morphologically the fungus resembles closely Pythium rostratum, however its antheridial characters are unique. The oogonia of this species are provided with hypogynous and monoclinous antheridia. The antheridial cells are inflated and are probably the largest and longest for the genus. The internal transcribed spacer region of its nuclear ribosomal DNA indicates that it is entirely different from all other species of Pythium. This new species is characterized by its spherical to elongated sporangia, smooth-walled oogonia and hypogynous to monoclinous antheridia bearing long antheridial cells closely applied to the oogonia. Morphological features of this new species, together with the sequences of the ITS region of its nuclear ribosomal DNA and comparison with related species are discussed here.     

凝胶电冰与腐霉属的分类

用聚丙烯酰胺凝胶电泳技术分析27株计23种腐霉的菌体蛋白,结果表明:蛋白带型在种内表现出一致性,在种间则差异显著。     

Pythium carbonicum,a new species isolated from a spoil heap in northern France,the ITS region,taxonomy and comparison with related species

Pythium carbonicum (F-72) sp. nov. was found in soil samples taken on the top of a spoil heap in northern France. The morphology of this new species resembles that of a recently described species: Pythium megacarpum. However, the antheridial and oogonial characteristics of this new species are unique, and the comparison of its ITS region of the nuclear ribosomal DNA indicates that this species is also related to the genus Phytophthora. The fungus does not sporulate, the sporangia germinate directly into mycelium through germ tubes. The oogonia of P. carbonicum are smooth-walled and also papillated, and are provided with monoclinous and diclinous antheridia that wrap around, forming a complicated knot. Morphological features of this new species, together with the sequences of the ITS region of its nuclear ribosomal DNA and its comparison with related species are discussed here.     

Species-specific PCR primers for Pythium developed from ribosomal ITS1 region

AIMS: To develop a specific method for distinguishing and detecting Pythium species. METHODS AND RESULTS: Twenty PCR primers were designed from the sequences of the rDNA internal transcribed spacer 1 (ITS1) region from 34 Pythium species. The specificity of these forward primers paired with ITS2 or ITS4 and reverse universal primers was tested. Five species-specific primers were obtained, other primers showed different specificity to Pythium species. The specific amplifications enabled nine Pythium species to be differentiated. Specific detection of Pythium aphanidermatum from infested plants and P. dimorphum from soil was demonstrated. CONCLUSIONS: A method for identifying nine Pythium species using specific PCR amplification was achieved. SIGNIFICANCE AND IMPACT OF THE STUDY: Because of its rapidness and ease, the results of PCR amplified with different primers can be a powerful method for identifying Pythium species and detecting or monitoring the target fungus directly from plant material, soil and water samples.