Nitrogen dynamics in the hyporheic zone of a forested stream during a small storm, Hokkaido, Japan

Water and dissolved nitrogen flows through the hyporheic zone of a 3rd-order mountain stream in Hokkaido, northern Japan were measured during a small storm in August 1997. A network of wells was established to measure water table elevations and to collect water samples to analyze dissolved nitrogen concentrations. Hydraulic conductivity and the depth to bedrock were surveyed. We parameterized the groundwater flow model, MODFLOW, to quantify subsurface flows of both stream water and soil water through the hyporheic zone. MODFLOW simulations suggest that soil water inflow from the adjacent hill slope increased by 1.7-fold during a small storm. Dissolved organic nitrogen (DON) and ammonium (NH ₄ ⁺ ) in soil water from the hill slope were the dominant nitrogen inputs to the riparian zone. DON was consumed via mineralization to NH ₄ ⁺ in the hyporheic zone. NH ₄ ⁺ was the dominant nitrogen species in the subsurface, and showed a net release during both base and storm flow. Nitrate appeared to be lost to denitrification or immobilized by microorganisms and/or vegetation in the riparian zone. Our results indicated that the riparian and hyporheic system was a net source of NH ₄ ⁺ to the stream.     

Patterns of hydrological exchange and nutrient transformation in the hyporheic zone of a gravel-bottom stream: examining terrestrial—aquatic linkages

• 1 The terrestrial-aquatic interface beneath a riparian corridor was investigated as a region of hydrological and biological control of nutrient flux. Subsurface flow paths were defined from the channel toward the riparian zone and also from the riparian zone toward the channel using tracer-injection studies. Solute transport had a rapid channel component (m min^?1) and a slow hyporheic flow component (mh^?1, m day^?1). Subsurface flow beneath the riparian zone approximated a straight path entering at meanders but could also cross beneath the stream, possibly using relic channels.
• 2 Dissolved oxygen (DO) concentration in the hyporheic zone ranged from <1.0 to 9.5mgl^?1 due to permeability variations in bankside sediments. DO concentration was related to the proportion of stream water in the lateral hyporheic zone, indicating that the channel water was the DO source.
• 3 The magnitude and riming of lateral water exchange was linked to previously published studies of nitrification and denitrificarion. Both nitrification potential and channel exchange decreased with distance from the channel and were absent at sites lacking effective exchange, due to low DO. Field amendment of ammonium to an aerobic flow path indicated nitrification potential under natural hydrological conditions. Denitrification potential was inversely related to channel exchange and was insignificant in channel sediments. Field amendment of acetylene plus nitrate to a flow path with low DO and minimal channel exchange indicated denitrificarion of amended nitrate.
• 4 Comparison of hydraulic head to distribution of the biologically important solutes DO, ammonium, and nitrate was useful for interpreting previous findings and conceptualizing the riparian zone as a functioning ecotone between terrestrial and aquatic systems.

     

The role of water exchange between a stream channel and its hyporheic zone in nitrogen cycling at the terrestrial-aquatic interface

The subsurface riparian zone was examined as an ecotone with two interfaces. Inland is a terrestrial boundary, where transport of water and dissolved solutes is toward the channel and controlled by watershed hydrology. Streamside is an aquatic boundary, where exchange of surface water and dissolved solutes is bi-directional and flux is strongly influenced by channel hydraulics. Streamside, bi-directional exchange of water was qualitatively defined using biologically conservative tracers in a third order stream. In several experiments, penetration of surface water extended 18 m inland. Travel time of water from the channel to bankside sediments was highly variable. Subsurface chemical gradients were indirectly related to the travel time. Sites with long travel times tended to be low in nitrate and DO (dissolved oxygen) but high in ammonium and DOC (dissolved organic carbon). Sites with short travel times tended to be high in nitrate and DO but low in ammonium and DOC. Ammonium concentration of interstitial water also was influenced by sorption-desorption processes that involved clay minerals in hyporheic sediments. Denitrification potential in subsurface sediments increased with distance from the channel, and was limited by nitrate at inland sites and by DO in the channel sediments. Conversely, nitrification potential decreased with distance from the channel, and was limited by DO at inland sites and by ammonium at channel locations. Advection of water and dissolved oxygen away from the channel resulted in an oxidized subsurface habitat equivalent to that previously defined as the hyporheic zone. The hyporheic zone is viewed as stream habitat because of its high proportion of surface water and the occurrence of channel organisms. Beyond the channel's hydrologic exchange zone, interstitial water is often chemically reduced. Interstitial water that has not previously entered the channel, groundwater, is viewed as a terrestrial component of the riparian ecotone. Thus, surface water habitats may extend under riparian vegetation, and terrestrial groundwater habitats may be found beneath the stream channel.     

A mixing model analysis of stream solute dynamics and the contribution of a hyporheic zone to ecosystem function*

1. We monitored streamwater and streambed sediment porewaters from White Clay Creek (WCC), SE Pennsylvania, for dissolved organic carbon (DOC), dissolved oxygen (DO) and conductivity to investigate organic matter processing within the hyporheic zone. Dissolved organic carbon and DO concentrations were higher in the streamwater than in the porewaters and, in many cases, concentrations continued to diminish with increasing depth into the streambed. 2. Hydrological exchange data demonstrated that the permeability of the stream bed declines with depth and constrains downwelling, effectively isolating porewaters >30 cm from streamwater. 3. End‐member mixing analysis (EMMA) based on conductivity documented a DOC source and DO sink in the hyporheic zone. We calculated hyporheic streambed DOC fluxes and respiration from the EMMA results and estimates of water flux. Based upon our calculations of biodegradable DOC entering the hyporheic zone, we estimate that DOC supports 39% of the hyporheic zone respiration, with the remaining 61% presumably being supported by entrained particulate organic carbon. Hyporheic respiration averaged 0.38 g C m^?2 d^?1, accounted for 41% of whole ecosystem respiration, and increased baseflow ecosystem efficiency from 46 to 59%. 4. Advective transport of labile organic molecules into the streambed concentrates microbial activity in near‐surface regions of the hyporheic zone. Steep gradients in biogeochemical activity could explain how a shallow and hydrologically constrained hyporheic zone can dramatically influence organic matter processing at the ecosystem scale.     

Exoenzyme activities as indicators of dissolved organic matter composition in the hyporheic zone of a floodplain river

1. We measured the hyporheic microbial exoenzyme activities in a floodplain river to determine whether dissolved organic matter (DOM) bioavailability varied with overlying riparian vegetation patch structure or position along flowpaths. 2. Particulate organic matter (POM), dissolved organic carbon (DOC), dissolved oxygen (DO), electrical conductivity and temperature were sampled from wells in a riparian terrace on the Queets River, Washington, U.S.A. on 25 March, 15 May, 20 July and 09 October 1999. Dissolved nitrate, ammonium and soluble reactive phosphorus were also collected on 20 July and 09 October 1999. Wells were characterised by their associated overlying vegetation: bare cobble/young alder, mid‐aged alder (8–20 years) and old alder/old‐growth conifer (25 to >100 years). POM was analysed for the ash‐free dry mass and the activities of eight exoenzymes (α‐glucosidase, β‐glucosidase, β ‐N‐acetylglucosaminidase, xylosidase, phosphatase, leucine aminopeptidase, esterase and endopeptidase) using fluorogenic substrates. 3. Exoenzyme activities in the Queets River hyporheic zone indicated the presence of an active microbial community metabolising a diverse array of organic molecules. Individual exoenzyme activity (mean ± standard error) ranged from 0.507 ± 0.1547 to 22.8 ± 5.69 μmol MUF (g AFDM)^?1 h^?1, was highly variable among wells and varied seasonally, with the lowest rates occurring in March. Exoenzyme activities were weakly correlated with DO, DOC and inorganic nutrient concentrations. 4. Ratios of leucine aminopeptidase : β‐glucosidase were low in March, May and October and high in July, potentially indicating a switch from polysaccharides to proteins as the dominant component of microbial metabolism. 5. Principal components analysis indicated that there were patch effects and that these effects were strongest in the summer. 6. DOM degradation patterns did not change systematically along hyporheic flowpaths but varied with overlying forest patch type in the Queets River hyporheic zone, suggesting that additional carbon inputs exist. We hypothesise that the most likely input is the downward movement of DOM from overlying riparian soils. Understanding this movement of DOM from soils to subsurface water is essential for understanding both the hyporheic metabolism and the carbon budget of streams and rivers.     

Influence of base flow stream bank seepage on riparian zone nitrogen biogeochemistry

We examined the effect of sustained stream bank seepage during base flow conditions on the pore water nitrogen biogeochemistry of two riparian zones in lowland agricultural areas in southern Ontario, Canada. Nitrate, ammonium and dissolved oxygen concentrations in riparian subsurface water over a two-year period showed well-organized spatial patterns along stream bank seepage flow paths that extended seasonally up to 25 m inland. High levels of dissolved oxygen and NO₃⁻ in stream inflow were depleted rapidly at the stream bank interface suggesting the occurrence of aerobic microbial respiration followed by denitrification. A zone of NH₄⁺ accumulation persisted in more anaerobic sediments inland from the bank margin, although the magnitude and intensity of the pattern varied seasonally. A bromide tracer and NO₃⁻ co-injection at the stream bank interface indicated that bank seepage occurred along preferential flow paths in a poorly sorted gravel layer in the two riparian zones. Depletion of NO₃⁻ in relation to co-injected bromide confirmed that the bank margin was a hot spot of biogeochemical activity within the riparian zone. Conceptual models of humid temperate riparian zones have focused on nitrogen biogeochemistry in relation to hillslope to stream hydrologic flow paths. However, our results suggest that sustained stream bank inflow during low flow conditions can exert a dominant control on riparian nitrogen cycling in lowland landscapes where level riparian zones bounded by perennial streams receive limited subsurface inflows from adjacent slopes.     

A landscape perspective of surface–subsurface hydrological exchanges in river corridors

1. River corridors can be visualised as a three‐dimensional mosaic of surface–subsurface exchange patches over multiple spatial scales. Along major flow paths, surface water downwells into the sediment, travels for some distance beneath or along the stream, eventually mixes with ground water, and then returns to the stream. 2. Spatial variations in bed topography and sediment permeability result in a mosaic of patch types (e.g. gravel versus sandy patches) that differ in their hydrological exchange rate with the surface stream. Biogeochemical processes and invertebrate assemblages vary among patch types as a function of the flux of advected channel water that determines the supply of organic matter and terminal electron acceptors. 3. The overall effect of surface–subsurface hydrological exchanges on nutrient cycling and biodiversity in streams not only depends on the proportion of the different patch types, but also on the frequency distribution of patch size and shape. 4. Because nutrients are essentially produced or depleted at the downwelling end of hyporheic flow paths, reach‐scale processing rates of nutrients should be greater in stretches with many small patches (e.g. short compact gravel bars) than in stretches with only a few large patches (e.g. large gravel bars). 5. Based on data from the Rhône River, we predict that a reach with many small bars should offer more hyporheic refugia for epigean fauna than a reach containing only a few large gravel bars because benthic organisms accumulate preferentially in sediments located at the upstream and downwelling edge of bars during floods. However, large bars are more stable and may provide the only refugia during severe flood events. 6. In river floodplain systems exhibiting pronounced expansion/contraction cycles, hyporheic assemblages within newly created patches not only depend on the intrinsic characteristics of these patches but also on their life span, hydrological connection with neighbouring patches, and movement patterns of organisms. 7. Empirical and theoretical evidence illustrate how the spatial arrangement of surface–subsurface exchange patches affects heterogeneity in stream nutrient concentration, surface water temperature, and colonisation of dry reaches by invertebrates. 8. Interactions between fluvial action and geomorphic features, resulting from seasonal and episodic flow pulses, alter surface–subsurface exchange pathways and repeatedly modify the configuration of the mosaic, thereby altering the contribution of the hyporheic zone to nutrient transformation and biodiversity in river corridors.     

Does carbon enrichment affect hyporheic invertebrates in a gravel stream?

For a period of one year we injected a solution of stream water enriched with glucose and inorganic nitrogen and phosphorus at two experimental sites into the hyporheic sediments of the Oberer Seebach, Austria. The biofilm reacted with a quantitative increase after two weeks. The hyporheic invertebrates were sampled with the Cage Pipe Trap method, where the number of trapped animals is determined by the spatial density and the activity of the invertebrates. Within two and six weeks, the hyporheic invertebrates exhibited a reaction indicating an utilization of the new food resources. Over a longer period of one year, three different reaction patterns appeared. The number of nematods and ostracods increased extensively, presumably caused by the modification of the spatial structure of the environment due to biofilm growth. The number of the small sized invertebrates decreased, reflecting the reduced feeding effort. And the number of the large insect larvae increased indicating that these group is mainly limited by space. The hyporheic zone is described as a ‘self-cleaning DOC filter’, an attribute that is particularly assigned to the ecotone between the riparian soil zone and the stream hyporheic zone.     

Estimation of nitrate removal by riparian wetlands and streams in agricultural catchments: effect of discharge and stream order

1. Assessment of the role of landscape structures such as buffers is a necessary prerequisite for the sustainable management of water resources in an agricultural setting. 2. We monitored nitrate concentrations during interstorm periods at the outlet of 16 subcatchments of different orders within a catchment of 378 km². We characterised stream network, wetlands, agricultural practices and land cover and identified their relationships with nitrate fluxes and concentrations. 3. Two main factors controlled annual nitrate fluxes: the agricultural nitrogen surplus and the nature of the system comprising the wetland zone and adjoining watercourses. In the latter case, nitrate fluxes were reduced in proportion to the surface area of the riparian wetland and the flowpath distance of fluxes in the stream network. At the scale of the order‐6 stream, 53% of annual nitrate flux during interstorm periods was removed during transfer via the wetland and the river, corresponding to 21.1 kg N ha^?1 per year. 4. The influence of the riparian wetland zone/watercourse system increased during periods of low water level, explaining up to 64% of nitrate concentration variation among locations within the river network, but only 9% during periods of high water level. 5. The buffering role was stronger at higher stream orders, and the dependence on stream order was more apparent at low water level, when we observed mean nitrate concentrations in the order‐6 stream that were 47% lower than observed in order‐2 or order‐3 streams.     

Hyporheic zone hydrology and nitrogen dynamics in relation to the streambed topography of a N-rich stream

The influence of riffle-pool units on hyporheic zone hydrology and nitrogen dynamics was investigated in Brougham Creek, a N-rich agricultural stream in Ontario, Canada. Subsurface hydraulic gradients, differences in background stream and groundwater concentrations of conservative ions, and the movement of a bromide tracer indicated the downwelling of stream water at the head of riffles and upwelling in riffle-pool transitions under base flow conditions. Channel water also flowed laterally into the floodplain at the upstream end of riffles and followed a subsurface concentric flow path for distances of up to 20 m before returning to the stream at the transition from riffles to pools. Differences in observed vs predicted concentrations based on background chloride patterns indicated that the hyporheic zone was a sink for nitrate and a source for ammonium. The removal of nitrate in the streambed was confirmed by the loss of nitrate in relation to co-injected bromide in areas of downwelling stream water in two riffles. Average stream water nitrate-N concentrations of 1.0 mg/L were often depleted to <0.005 mg/L near the sediment-water interface. Consequently, an extensive volume of the hyporheic zone in the streambed and floodplain had a large unused potential for nitrate removal. Conceptual models based mainly on studies of streams with low nutrient concentrations have emphasized the extent of surface-subsurface exchanges and water residence times in the hyporheic zone as important controls on stream nutrient retention. In contrast, we suggest that nitrate retention in N-rich streams is influenced more by the size of surface water storage zones which increase the residence time of channel water in contact with the major sites of rapid nitrate depletion adjacent to the sediment-water interface.     

Nitrogen retention in the riparian zone of catchments underlain by discontinuous permafrost

1. Riparian zones function as important ecotones that reduce nitrate concentration in groundwater and inputs into streams. In the boreal forest of interior Alaska, permafrost confines subsurface flow through the riparian zone to shallow organic horizons, where plant uptake of nitrate and denitrification are typically high. 2. In this study, riparian zone nitrogen retention was examined in a high permafrost catchment (approximately 53% of land area underlain by permafrost) and a low permafrost catchment (approximately 3%). To estimate the contribution of the riparian zone to catchment nitrogen retention, we analysed groundwater chemistry using an end‐member mixing model. 3. Stream nitrate concentration was over twofold greater in the low permafrost catchment than the high permafrost catchment. Riparian groundwater was not significantly different between catchments, averaging 13 μm overall. Nitrogen retention, measured using the end‐member mixing model, averaged 0.75 and 0.22 mmol N m^?2 day^?1 in low and high permafrost catchments, respectively, over the summer. The retention rate of nitrogen in the riparian zone was 10–15% of the export in stream flow. 4. Our results indicate that the riparian zone functions as an important sink for groundwater nitrate and dissolved organic carbon (DOC). However, differences in stream nitrate and DOC concentrations between catchments cannot be explained by solute inputs from riparian groundwater to the stream and differences between streams are probably attributable to deeper groundwater inputs or flows from springs that bypass the riparian zone.     

Sources and seasonal patterns of dissolved organic matter (DOM) in the hyporheic zone

The hyporheic zone is a region underneath streambeds that integrates surface and groundwater. Although its location is central to biogeochemical linkages between the riparian zone, dissolved nutrients, and benthic biota, the seasonal quality and likely sources of dissolved organic matter (DOM) in the hyporheic zone are not well understood. To investigate DOM characteristics in the hyporheic zone, water from the surface and subsurface (at depths 20, 60, and 100 cm below the streambed) was sampled every 4 weeks from 2007 to 2008 in a third-order stream in southern Ontario. Using UV spectroscopy, measures of spectral slopes, aromaticity, and A ₂₅₄/A ₃₆₅ ratios (molecular weight) were obtained. Temporal changes in these measures were consistent with watershed processes such as shedding of leaf litter in the fall, and photochemical and biofilm influence in the spring and summer. The fluorescence index (a measure of relative DOM source) suggested that at the surface and in the downwelling zone, DOM microbial sources increased with depth in the sediment, regardless of the season. Excitation–emission matrices (EEMs) showed seasonally distinct, protein-like DOM components of bacterial origin that were stronger in the fall. Leachates from specific allochthonous DOM sources—leaf litter from Betula papyrifera (white birch) and Thuja occidentalis (white cedar)—and an autochthonous source, biofilm, were isolated and incubated with unfiltered surface water. EEMs from these leachates indicated that these sources could indeed help explain observed patterns of DOM in surface and subsurface waters. These results suggest that although DOM sources were relatively constant, biogeochemical processing within the hyporheic zone resulted a DOM pool that was temporally dynamic and altered the nature of organic matter transported downstream into lakes and rivers.     

Interpreting spatial patterns in redox and coupled water–nitrogen fluxes in the streambed of a gaining river reach

Water pathways through permeable riverbeds are multi-dimensional, including lateral hyporheic exchange flows as well as vertical (upwelling and downwelling) fluxes. The influence of different pathways of water on solute patterns and the supply of nitrate and other redox-sensitive chemical species in the riverbed is poorly understood but could be environmentally significant. For example, nitrate-rich upwelling water in the gaining reaches of groundwater-fed rivers has the potential to supply significant quantities of nitrate through the riverbed to surface waters, constraining opportunities to deliver the goals of the EU Water Framework Directive to achieve ‘good ecological status’. We show that patterns in porewater chemistry in the armoured river bed of a gaining reach (River Leith, Cumbria) reflect the spatial variability in different sources of water; oxic conditions being associated with preferential discharge from groundwater and reducing conditions with longitudinal and lateral fluxes of water due to water movement from riparian zones and/or hyporheic exchange flows. Our findings demonstrate the important control of both vertical and lateral water fluxes on patterns of redox-sensitive chemical species in the river bed. Furthermore, under stable, baseflow conditions (<Q₉₀) a zone of preferential discharge, comprising 20 % of the reach by area contributes 4–9 % of the total nitrate being transported through the reach in surface water, highlighting the need to understand the spatial distribution of such preferential discharge locations at the catchment scale to establish their importance for nitrate delivery to the stream channel.     

Perspectives and predictions on the microbial ecology of the hyporheic zone

1. Studies of hyporheic microbial ecology have suggested an important role for hyporheic microbial processes in stream ecosystem functioning. Using evidence from microbial communities in other aquatic habitats, some predictions are made concerning the diversity of microbial types and microbial processes likely to occur in the hyporheic zone, and the relative importance of these various types to the hyporheic ecosystem. 2. It is predicted that the biofilm growth form of interstitial micro-organisms will create a variety of microniches, allowing coexistence of a great diversity of microbial types, and promoting the activity of some otherwise poor competitors. It is further predicted that the confluence of reduced groundwaters and aerobic surface waters will favour chemolithotrophic processes in the hyporheic zone, but that these will contribute significantly to hyporheic production only if surface water is very low in dissolved organic carbon, or the groundwater is extremely reduced, such as by the influence of riparian wetlands. A variety of anaerobic respiratory pathways, such as nitrate, ferric ion, sulphate and even methanogenic respiration will be employed in the hyporheic zone, with biofilm dynamics permitting these to occur even in aerobic sediments. Anaerobic pathways may account for a significant proportion of total hyporheic organic matter mineralization. 3. The role of fungi in hyporheic dynamics is, as yet, almost completely unstudied. However, it is expected that they will be important in breaking down buried particulate organic matter (POM), which may account for a large proportion of total stream POM. 4. Physicochemical conditions in hyporheic sediments appear to be highly heterogeneous, and this heterogeneity may be very important in the cycling of certain nutrients, especially nitrogen, which involves a series of steps requiring different conditions. 5. Various new techniques are now available by which biofilm dynamics and in situ microbial processes may be measured. Studies are recommended of intact microbial communities both at the microscale of the biofilm and at the scale of the heterogeneities occurring in hyporheic sediments. Studies are needed that measure actual rates of microbial processes under in situ conditions.     

Ground water flow paths in relation to nitrogen chemistry in the near-stream zone

Interactions between ground water flow paths and water chemistry were studied in the riparian zone of a small headwater catchment near Toronto, Ontario. Significant variations in oxygen — 18 and chloride indicated the presence of distinct sources of water in the ground water flow system entering the near-stream zone. Shallow ground water at the upland perimeter of the riparian zone had nitrate-N, chloride and dissolved oxygen concentrations which ranged between 100–180 µg L^–1, 1.2–1.8 mg L^–1 and 4.6–9.1 mg L^–1 respectively. Concentrations of nitrate — N in deep ground water flowing upward beneath the riparian wetland were < 10 µg L^–1, whereas chloride and dissolved oxygen ranged between 0.6–0.9 mg L^–1 and 0.4–2.2 mg L^–1 respectively. Ammonium — N concentrations (20–60 µg L^–1) were similar in shallow and deep ground water. Ground water was transported through the wetland to the stream by three hydrologic pathways. 1) Shallow ground water emerged as springs near the base of the hillslope producing surface rivulets which crossed the riparian zone to the stream. 2) Deep ground water flowed upward through organic soils and entered the rivulets within the wetland. 3) Deep ground water reached the stream as bed and bank seepage. Springs were higher in nitrate and chloride than rivulets entering the stream, whereas bank seeps had lower concentrations of nitrate and chloride and considerably higher ammonium concentrations than the rivulets. These contrasts in nitrate and chloride concentrations were related to initial differences in the ion chemistry of shallow and deep ground water rather than to element transformations within the riparian wetland. Differences in ammonium concentration between seeps and rivulets were caused by immobilization of ammonium in the substrates of aerobic rivulets, whereas little ammonium depletion probably occurred in deep ground water flowing upward through reduced subsurface organic soils around the stream perimeter.     

Methanogenesis in Arizona,USA dryland streams

Methanogenesis was studied in five streams of central and southern Arizona by examining the distribution of methane in interstitial water and evasion of methane in three subsystems (hyporheic, parafluvial and bank sediments). In Sycamore Creek, the primary study site (studied during summer and early autumn), methane content of interstitial water exhibited a distinct spatial pattern. In hyporheic (sediments beneath the wetted channel) and parfluvial zones (active channel sediments lateral to the wetted channel), which were well oxygenated due to high hydrologic exchange with the surface stream and had little particulate organic matter (POM), interstitial methane concentration averaged only 0.03 mgCH₄-C/L. Bank sediments (interface between the active channel and riparian zone), in contrast, which were typically vegetated, had high POM, low hydrologic exchange and concomitantly low dissolved oxygen levels, had interstitial concentration averaging 1.5 mgCH4-C/L. Methane emission from Sycamore Creek, similar to methane concentration, averaged only 3.7 mgCH₄-C·m⁻²·d⁻¹ from hyporheic and parafluvial zones as opposed to 170 mgCH₄-C·m⁻²·d⁻¹ from anoxic bank sediments. Methane in four additional streams sampled (one sampling date during late winter) was low and exhibited little spatial variation most likely due to cooler stream temperatures. Interstitial methane in parafluvial and bank sediments of all four streams ranged from only 0.005 to 0.1 mgCH₄-C/L. Similarly methane evasion was also low from these streams varying from 0 to 5.7 mgCH₄-C·m⁻²·d⁻¹. The effects of organic matter and temperature on methanogenesis were further examined by experimentally manipulating POM and temperature in stoppered flasks filled with hyporheic sediments and stream water. Methane production significantly increased with all independent variables. Methane production is greatest in bank sediments that are relatively isolated hydrologically and lowest in hyporheic and parafluvial sediments that are interactive with the surface stream.     

In‐stream habitat and macroinvertebrate responses to riparian corridor length in rangeland streams

Conservation and restoration of riparian vegetation in agricultural landscapes has had mixed success at protecting in‐stream habitat, potentially due to the mismatch between watershed‐scale impacts and reach‐scale restoration. Prioritizing contiguous placement of small‐scale restoration interventions may effectively create larger‐scale restoration projects and improve ecological outcomes. We performed a multi‐site field study to evaluate whether greater linear length of narrow riparian tree corridors resulted in measurable benefits to in‐stream condition. We collected data at 41 sites with varying upstream tree cover nested within 13 groups in rangeland streams in coastal northern California, United States. We evaluated the effect of riparian tree corridor length on benthic macroinvertebrate communities, as well as food resources, water temperature, and substrate size. Sites with longer riparian corridors had higher percentages of invertebrates sensitive to disturbance (including clingers and EPT taxa) as well as lower water temperatures and less fine sediment, two of the most important aquatic stressors. Despite marked improvement, we found no evidence that macroinvertebrate communities fully recovered, suggesting that land use continued to constrain conditions. The restoration of long riparian corridors may be an economically viable and rapidly implementable technique to improve habitat, control sediment, and counter increasing water temperatures expected with climate change within the context of ongoing land use.     

The hyporheic zone: Hydrogeological and geochemical study of a stream in the pyrenees mountains

The hydrogeological and geochemical characteristics of the hyporheic zone were studied for a year on a 30 m² site within a stream in the Pyrenees Mountains. This included the drawing of potentiometric maps, measuring hydraulic conductivity and porosity, and the monthly analysis of major chemical elements in water samples. Use of the combined data led to the clarification of certain aspects of the characteristics, functioning and development of the hyporheic zone. Even though the area studied lies in a zone of groundwater recharge, the direct vertical exchange between surface- and groundwater does not seem to be determinant in the potentiometric and chemical development of the area. However, the state of reserves, which can be reduced or reconstituted, seems to play an essential role in flow dynamics, and thus of the chemistry of this area. Flow dynamics in the hyporheic zone apparently are of the longitudinal-transversal type, related to the local stream morphology. The results show how difficult it is to define the hyporheic zone in a structural sense, even though the zone represents an entity that is clearly characterized by specific and identifiable dynamics.     

Hyporheic community composition in a gravel-bed stream: influence of vertical hydrological exchange, sediment structure and physicochemistry

Summary 1. We studied the relative contributions of the magnitude and direction of vertical hydrological exchange, subsurface sediment composition and interstitial physicochemistry in determining the distribution of hyporheic invertebrates in the Kye Burn, a fourth order gravel‐bed stream in New Zealand. 2. In winter 2000 and summer 2001, we measured vertical hydrological gradient (VHG), dissolved oxygen, water temperature and water chemistry using mini‐piezometers, each installed in a different upwelling or downwelling zone. Next to every piezometer, a freeze core sample was taken to quantify the sediment, particulate organic matter and invertebrates. 3. Dissolved oxygen concentration at 25 cm was high on both occasions (>9 mg L^?1) but was higher in winter than summer. Interstitial water temperature was higher in down than upwellings and was substantially higher in summer than winter. Other features of the subsurface sediments and interstitial nitrate–nitrite concentrations were similar on both occasions and in up and downwellings. Interstitial ammonium and soluble reactive phosphorous concentrations were higher in winter than summer and ammonium was higher in up than downwelling areas. 4. The proportion of fine sediment (63 μm–1 mm), sediment heterogeneity and VHG accounted for the greatest proportion of variance in invertebrate distributions in both summer and winter. 5. The hyporheos was numerically dominated by early instar leptophlebiid mayfly nymphs and asellotan isopods. Water mites were a taxonomically diverse group with 13 genera. Taxonomic diversity (Shannon–Weaver), but not taxon richness, was higher in upwelling areas, reflecting lower numerical dominance by a few taxa in these locations. 6. Sediment composition (particularly the amount of fine sediments) and vertical hydrological exchange determined the composition and distribution of the hyporheos. Patchiness in these factors is important in planning sampling regimes or field manipulations in the hyporheic zone.     

Diel variation in surface and subsurface microbial activity along a gradient of drying in an Australian sand-bed stream

1. Microbes play key roles in nutrient transformation and organic matter mineralisation in the hyporheic zone but their short‐term responses to diel variations in discharge and temperature are unknown. Rates of microbial esterase activity were hypothesised to vary vertically and along a gradient of moisture in a drying sand‐bed stream where discharge fluctuated daily in response to evapotranspiration. 2. At ‘fully saturated’, ‘moist’ and ‘dry’ locations in three sites along a drying Australian sand‐bed stream, microbial activity at three depths (surface, 10 and 30 cm) was assessed using fluorescein diacetate hydrolysis. Samples were collected in mid‐summer in the late afternoon and again at dawn to assess diel variation in hydrolytic activity at each site and depth. Data loggers tracked diel variations in temperature at each depth. 3. Hydrolytic activity was up to 10‐fold greater in the surface sediments in late afternoon than at dawn in all habitats, and was correlated with surface sediment temperature. Diel differences in activity were not detected at 10 cm, although daily thermal cycles were evident at this depth. Unexpectedly, activity was marginally higher at dawn at 30 cm in all habitats, perhaps reflecting lags in temperature at that depth. 4. Overall, microbial activity declined with depth, strongly correlated with vertical trends in total organic matter and concentrations of dissolved phosphorus. Particulate organic matter, probably buried during a flood 35 days earlier, appeared largely responsible for these vertical trends. On the other hand, there was little evidence for hydrological exchange between much of the hyporheic zone and the surface stream, implying that processes in the subsurface zone of this stream are effectively isolated during baseflow in mid‐summer. 5. Diel cycles of wetting and drying in the moist habitats did not enhance esterase activity relative to the dry or fully saturated habitats. Sediment moisture was not correlated with microbial activity, and mats of senescent algae appeared to inhibit water loss from surface sediments in the moist habitat. In this sand‐bed stream, local diel fluctuations in water level appear to have less influence on microbial activity and mineralisation of organic matter in the sediments than occasional floods that bury leaf litter and renew many hyporheic zone functions. Subreach‐scale processes seem to be the major driving force of microbial processes and nutrient cycling in this sand‐bed river.