Macrophyte diversity and composition in relation to substratum characteristics in regulated and unregulated Danish streams

1. The objective of the present study was to examine how the physical stream environment in regulated and unregulated lowland streams affects the diversity and distribution of macrophyte communities. We analysed the abundance, distribution and composition of macrophytes, together with physical parameters, in seven regulated and seven unregulated unshaded Danish stream reaches. 2. Total macrophyte coverage was similar in the regulated and unregulated streams, but species richness and Shannon diversity were higher in the unregulated streams. Overall, we found fifty-two different species in the regulated stream reaches and sixty-two in the unregulated stream reaches. The spatial distribution of macrophytes on the stream bottom was more heterogeneous in the unregulated streams. 3. We found positive correlations between the coverage and diversity of macrophytes and the coverage of coarse-textured substratum types on the stream bottom, as well as between macrophyte coverage and diversity and substratum heterogeneity. We also found that the macrophytes were more heterogeneously distributed where substratum heterogeneity was greater. 4. The species growing both submerged and emergent were more abundant in the regulated streams, whereas species growing only submerged were more abundant in the unregulated streams. Species growing submerged, species growing both submerged and emergent, and species only growing emergent segregated differently in a canonical correspondence analysis ordination. The submerged species were primarily associated with coarser-textured substrata, whereas species growing both submerged and emergent, and species growing only emergent were associated with finer-textured substrata. 5. The most abundant species in the regulated streams, Sparganium emersum, accounting for almost one-third of the total macrophyte coverage, was primarily associated with clay and sandy bottom substrata, whereas the most abundant species in the unregulated streams, Batrachium peltatum, was primarily associated with gravel and stony substrata.     

Effects of stream restoration and management on plant communities in lowland streams

1. We evaluated restoration success on macrophyte species diversity and composition in lowland streams using communities in 30 naturally meandering stream reaches in the western part of Jutland, Denmark, as reference target communities. Fuzzy set clustering was used to examine the floristic and environmental similarity among reaches, whereas fuzzy set ordination was used to relate floristic patterns to environmental variables. 2. Two major groups of streams were identified based on their floristic composition. One group consisted of reference and restored reaches and the other of the majority of channelised reaches. We found that management exerted a strong influence on the macrophyte communities and that the identified groups were related to differences in management intensity. 3. Our results also indicate that bank morphology and bed level affected macrophyte communities in the streams, particularly the richness and abundance of terrestrial species. The analyses performed suggest that shallow and wide banks allow for a larger migration of species from the stream banks into the streams, thereby enhancing species diversity within the stream channel. 4. The results of this study suggest that macrophyte communities in channelised lowland streams can recover following restorative interventions given that stream management (i.e. weed cutting and dredging) is minimised and that stream banks are reprofiled to improve the lateral connectivity between the stream and its valley.     

Macrophytes in Urban Stream Rehabilitation: Establishment, Ecological Effects, and Public Perception

Efforts to rehabilitate degraded urban streams generally focus on improving physical habitat and rarely include reestablishing biota such as macrophytes. Our objectives in this study were to propagate and transplant native macrophytes into a South Island, New Zealand, urban stream undergoing rehabilitation, assess macrophyte survival and growth, and determine whether native macrophytes suppress non-native macrophytes and/or enhance stream invertebrate communities. Effects of native macrophytes on invertebrates and non-native macrophytes were assessed after transplanting patches of native macrophytes into a 230-m-long stream section. A 100-m-long section upstream was left unplanted for subsequent comparisons. Following the study, a survey was conducted to gauge public opinion about the rehabilitation project and determine whether macrophytes were prominent in perceptions of stream health. In the first growing season, native macrophyte cover in the planted stream section increased from 1.5 to 20%, and then decreased during winter. Regrowth from rhizomes led to rapid aboveground growth during the second year, when cover reached 51%. Non-native macrophytes colonized the stream the first year, but native macrophytes appeared to limit the spread of non-natives, which were absent in the planted section by the second spring. Native macrophyte establishment did not enhance invertebrate communities as predicted; few invertebrate metrics differed significantly between the planted and unplanted sections. Pollution- and sediment-tolerant invertebrate taxa were abundant in both sections, suggesting that invertebrate colonization was limited by water quality or sedimentation, not macrophyte composition. Survey respondents considered the stream to be visually and ecologically improved after rehabilitation, and macrophyte establishment was generally considered positive or neutral.     

Seasonality of macrophytes and interaction with flow in a New Zealand lowland stream

Introduced submerged macrophytes have come to dominate many shallow water bodies in New Zealand, and are a common component of many lowland streams. We investigated the seasonal variation of macrophyte abundance, its influence on flow and channel volume, and the implications of this on stream habitat and functioning in Whakapipi Stream, a typical lowland stream draining a predominantly agricultural catchment.Abundance of macrophytes over the summer was primarily controlled by the phenological cycles of the two dominant species. Mean minimum total macrophyte biomass (36 g m^–2) and cover (7%) occurred in winter (June and August, respectively), and mean maximum biomass (324 g m^–2), and cover (79%) occurred in late summer (March and February respectively). Egeria densa comprised the majority of both cover and biomass during the study period, except early summer (December) when Potamogeton crispus was prevalent in the shallow stream reaches.Macrophyte beds had a major impact on summer stream velocities, reducing average velocities by an estimated 41%. Stream cross-sectional area was maintained at relatively stable levels similar to that recorded over winter, when stream discharge was in the order of seven times greater. The mean velocity distribution coefficient (), and Manning's roughness coefficient (n) were dependent on and displayed a positive linear relationship with macrophyte abundance. The velocity distribution coefficient is recommended as a better indicator of macrophyte effects on velocity in natural streams, as it does not assume uniform velocity, channel depth and slope within the stream reach.Our study shows that submerged macrophytes play an important structuring role within the stream during the summer period, where macrophyte beds act as semi-permeable dams, retarding flow velocities and increasing stream depth and cross-sectional area. This promotes habitat heterogeneity by creating a greater range of flow velocity variation, and also provides large stable low-flow areas. Other likely ecosystem effects resulting from macrophyte/velocity interactions include increased sedimentation, potential for nutrient processing and increased primary production, both by macrophytes and attached epiphyton. The complex architecture of submerged macrophytes and their influence on stream flow may also provide an increased diversity of habitat for other aquatic biota. We propose that management of degraded lowland streams such as the Whakapipi Stream to maintain stretches with moderate quantities of submerged macrophytes interspersed with shaded areas would optimise stream health during low summer flows.     

Using Macrophytes in Urban Stream Rehabilitation: A Cautionary Tale

Native macrophytes were transplanted into a small urban stream as part of a rehabilitation program, that also meandered the previously channeled stream, naturalized stream banks, and planted native riparian vegetation. Transplanted macrophytes minimized spread of introduced macrophytes and were viewed beneficially by residents, as was the stream rehabilitation. We transplanted the native macrophyte Myriophyllum triphyllum into five larger streams dominated by exotic macrophytes—some of which were weeded prior to transplanting—to see whether Myriophyllum could prevent regrowth of weeded plants. Transplanted Myriophyllum plants were washed away in two streams, reflecting high shear stresses there. Myriophyllum cover in the other streams decreased as weeded plants regrew. Our attempt at eliminating exotic macrophytes in patches in large streams was unsuccessful. Furthermore, council authorities weeded other experimental sections following complaints from residents of excess macrophyte growth. This problem highlighted conflicting multiple values placed on urban streams by managers and the public. A repeat survey of residents living near the original rehabilitated stream showed that many respondents were now critical of excessive plant growth—both in‐stream and riparian. A recurring comment made concerned the apparent lack of maintenance to the stream, giving it an untidy appearance. Difficulties with propagating and transplanting native macrophytes into larger streams, coupled with a negative perception of native vegetation (both in‐stream and riparian) if it looks unmanaged, suggest that planting macrophytes or riparian plants as part of urban stream rehabilitation programs may be more problematic than realized.     

Macrophyte communities in unimpacted European streams: variability in assemblage patterns, abundance and diversity

Macrophytes are an important component of aquatic ecosystems and are used widely within the Water Framework Directive (WFD) to establish ecological quality. In the present paper we investigated macrophyte community structure, i.e., composition, richness and diversity measures in 60 unimpacted stream and river sites throughout Europe. The objectives were to describe assemblage patterns in different types of streams and to assess the variability in various structural and ecological metrics within these types to provide a basis for an evaluation of their suitability in ecological quality assessment. Macrophyte assemblage patterns varied considerably among the main stream types. Moving from small-sized, shallow mountain streams to medium-sized, lowland streams there was a clear transition in species richness, diversity and community structure. There was especially a shift from a predominance of species-poor mosses and communities dominated by liverwort in the small-sized, shallow mountain streams to more species-rich communities dominated by vascular plants in the medium-sized, lowland streams. The macrophyte communities responded to most of the features underlying the typological framework defined in WFD. The present interpretation of the WFD typology may not, however, be adequate for an evaluation of stream quality based on macrophytes. First and most important, by using this typology we may overlook an important community type, which is characteristic of small-sized, relatively steep-gradient streams that are an intermediate type between the small-sized, shallow mountain streams and the medium-sized, lowland streams. Second, the variability in most of the calculated metrics was slightly higher when using the pre-defined typology. The consistency of these results should be investigated by analysing a larger number of sites. Particularly the need of re-defining the typology to improve the ability to detect impacts on streams and rivers from macrophyte assemblage patterns should be investigated. Electronic supplementary material Electronic supplementary material is available for this article at and accessible for authorised users.     

Does the process of drying submerged macrophytes affect community structure and composition of epiphytic diatoms?

This study investigates whether the process of pressing and drying a macrophyte host affects community structure and composition of epiphytic diatom communities. Epiphytic diatoms on submerged macrophytes from carbonate rivers and streams in southern Bavaria, Germany were sampled in order to study community structure and composition. Simultaneously, a specimen of the submerged macrophyte was taken to create a collection of dried plants. After 6months of preservation, diatom samples were taken from the herbarium macrophytes. Detrended correspondence analysis, diversity and evenness results indicate that recent and dried communities are indistinguishable. These results suggest that epiphytic diatom communities sampled from historic herbarium macrophytes can be utilised as bioindicators to assess former water quality.     

A Macrophyte-Based Rapid Biosurvey of Stream Water Quality: Restoration at the Watershed Scale

The restoration of chemically degraded rivers, lakes, and estuaries with large watersheds and pollution sources that are primarily diffuse in nature requires the grading of thousands of kilometers of tributary streams. Many population-and community-oriented biomonitoring methods have been developed that avoid the cost limitations of chemical/biomarker/bioassay approaches and the serious limitations of single-factor analysis as related to complex systems. In this study of the coastal plain and piedmont geomorphologic provinces of the Chesapeake Bay watershed, we have demonstrated a set of quantitative measures based on analysis of macrophyte populations that provide statistically significant separation of streams in accordance with their state-issued water quality rating. Macrophytes can be abundant and diverse in lower-order streams, and they demonstrate patterns of community structure and diversity similar to those of other organisms developed for biomonitoring of stream degradation. Unlike organisms previously and extensively used in biomonitoring techniques, however, macrophytes are considerably easier to identify and quantify. In addition, macrophyte techniques provide a range of measures of increasing sensitivity from species numbers at a few sites, to the presence/absence and abundance of indicator species, and, finally, to a diversity analysis based on easily identified species at an extended number of sites. We suggest that the ease of utilization of this methodology will allow repeated surveys of all streams in large watersheds with the invertebrate, fish and diatom biomonitoring to biomarking and chemical bioassays and finally analytical chemistry, progressively applied to verify and then identify specific pollution sources (“hot spots”) in a more limited number of problem streams.     

Effects of Spirogyra arcta on biomass and structure of submerged macrophyte communities

The presence of algae can greatly reduce the amount of light that reaches submerged macrophytes, but few experimental studies have been conducted to examine the effects of algae on biomass and structure of submerged macrophyte communities. We constructed communities with four submerged macrophytes (Hydrilla verticillata, Egeria densa, Ceratophyllum demersum, and Chara vulgaris) in three environments in which 0 (control), 50 and 100% of the water surface was covered by Spirogyra arcta. Compared to the control treatment, the 100% spirogyra treatment decreased biomass of the submerged macrophyte communities and of all the four macrophytes except C. demersum. Compared to the control and 50% treatments, the 100% treatment significantly increased relative abundance of C. demersum and decreased that of E. densa. Therefore, the presence of S. arcta can greatly affect the productivity and alter the structure of submerged macrophyte communities. To restore submerged macrophyte communities in conditions with abundant algae, assembling communities consisting of C. demersum or similar species may be a good practice.     

New paradigms in tropical limnology: the importance of the microbial food web

Biological invasions of aquatic plants (i.e., macrophytes) are a worldwide phenomenon, and within the last 15 years researchers have started to focus on the influence of these species on aquatic communities and ecosystem dynamics. We reviewed current literature to identify how invasive macrophyte species impact fishes and macroinvertebrates, explore how these mechanisms deviate (or not) from the accepted model of plant–fish interactions, and assess how traits that enable macrophytes to invade are linked to effects on fish and macroinvertebrate communities. We found that in certain instances, invasive macrophytes increased habitat complexity, hypoxia, allelopathic chemicals, facilitation of other exotic species, and inferior food quality leading to a decrease in abundance of native fish and macroinvertebrate species. However, mechanisms underlying invasive macrophyte impacts on fish and macroinvertebrate communities (i.e., biomass production, photosynthesis, decomposition, and substrate stabilization) were not fundamentally different than those of native macrophytes. We identified three invasive traits largely responsible for negative effects on fish and macroinvertebrate communities: increased growth rate, allelopathic chemical production, and phenotypic plasticity allowing for greater adaptation to environmental conditions than native species. We suggest that information on invasive macrophytes (including invasive traits) along with environmental data could be used to create models to better predict impacts of macrophyte invasion. However, effects of invasive macrophytes on trophic dynamics are less well-known and more research is essential to define system level processes.     

Diversity of macrophyte communities and their relationship to water quality in different types of lowland rivers in Poland

The aim of the study was to verify botanical and ecological traits of river typology based on macrophytes. We compared diversities of macrophyte communities in different river types and their relationship to water quality. The 240 surveyed rivers were situated in the central-west of Poland in a lowland area. Species compositional similarities were analysed using the Jaccard index. The macrophyte matrix was classified into four groups: Large rivers (LR), Sandy rivers (SaR), Stony rivers (StR) and Organic rivers (OR). The highest level of homogeneity was found for LR, followed by OR, StR and SaR. The greatest differences in species composition were found between LR and StR. Variabilities of indices (species richness, Shannon, Simpson and Pielou indices, and total cover) confirmed the specific diversity patterns in the four types of rivers. All metrics based on relative abundance were strongly correlated with each other, and they were never correlated with water quality. The total covers of LR and OR as well as species richness of LR show some correlation with water quality. The total cover was correlated with water quality in OR and LR. The communities with the highest species richness were related with OR.     

Primary producers in a Pampean stream: temporal variation and structuring role

Low current velocities, high nutrient levels, the lack of riparian forest vegetation, and the development of dense and rich macrophyte communities characterize Pampean streams. The objective of this study was to describe the main physical, chemical, and biological characteristics of a headwater Pampean stream as well as to analyze the role of macrophytes and phytobenthos. The study was conducted in a stream considered to be not much disturbed by human activities. Samples of water and organisms (macrophytes, benthic algae and invertebrates) were taken monthly for 14 months in two sampling stations, in fast flow and slow flow sites. Macrophyte biomass and diversity increased in spring and summer, and they decreased in autumn, when the plant community was greatly affected by an important flood. Phytobenthos biomass was lower in late summer, possibly due to the establishment of a dense cover of the floating macrophyte Lemna gibba L. Density of amphipods and gastropods greatly increases in spring and summer, jointly with the macrophyte development. Analysis of correlation showed that current velocity is the most important factor influencing macrophyte biomass and phytobenthos structure, while depth, nutrients, and herbivores are linked factors. Pampean streams could be considered systems dynamically fragile, because habitat heterogeneity is generated by aquatic vegetation, a substratum that varies along time.     

Aquatic Macrophytes Alter Metabolism and Nutrient Cycling in Lowland Streams

Macrophytes influence the physical, chemical, and biological characteristics of lowland streams, so may be critically important in stream management. We investigated the role of macrophytes in regulating metabolism and nutrient cycling in three lowland, agricultural streams. We measured stream metabolism over the growing season and following experimental macrophyte removal, and used short-term nutrient additions of phosphate (P) and ammonium to assess macrophyte influences on nutrient uptake. Primary production was closely correlated with macrophyte cover across all streams and dates, and decreased greatly with macrophyte removal, whereas ecosystem respiration was not correlated with macrophyte cover and was not altered by macrophyte removal. Phosphate uptake velocity was negatively related to primary production, suggesting that macrophyte activity actually slowed P uptake. Ammonium uptake was not correlated with macrophyte cover or metabolism metrics. Stream nitrate concentrations typically exceeded concentrations of incoming groundwater, suggesting little net nitrate retention in these macrophyte-dominated streams. Phosphorous demand by macrophytes was 10-fold lower than observed uptake rates, indicating that macrophyte P demand was much lower than that of other stream biota. Nitrogen demand by macrophytes was nearly equal to ammonium uptake and was not sufficient to affect the high nitrate flux. These results indicate that macrophytes drive ecosystem metabolism but have limited influence on water column nutrient concentrations because macrophyte demand is much lower than the supply available from the water column. Thus macrophytes in our streams had a large impact on stream trophic state, but offered little potential to influence nutrient removal via management.     

Hierarchical spatial structure of stream fish colonization and extinction

Spatial variation in extinction and colonization is expected to influence community composition over time. In stream fish communities, local species richness (alpha diversity) and species turnover (beta diversity) are thought to be regulated by high extinction rates in headwater streams and high colonization rates in downstream areas. We evaluated the spatiotemporal structure of fish communities in streams originally surveyed by Burton and Odum 1945 (Ecology 26: 182–194) in Virginia, USA and explored the effects of species traits on extinction and colonization dynamics. We documented dramatic changes in fish community structure at both the site and stream scales. Of the 34 fish species observed, 20 (59%) were present in both time periods, but 11 (32%) colonized the study area and three (9%) were extirpated over time. Within streams, alpha diversity increased in two of three streams but beta diversity decreased dramatically in all streams due to fish community homogenization caused by colonization of common species and extirpation of rare species. Among streams, however, fish communities differentiated over time. Regression trees indicated that reproductive life‐history traits such as spawning mound construction, associations with mound‐building species, and high fecundity were important predictors of species persistence or colonization. Conversely, native fishes not associated with mound‐building exhibited the highest rates of extirpation from streams. Our results demonstrate that stream fish colonization and extinction dynamics exhibit hierarchical spatial structure and suggest that mound‐building fishes serve as keystone species for colonization of headwater streams.     

European river plant communities: the importance of organic pollution and the usefulness of existing macrophyte metrics

The macrophyte surveys undertaken as part of the EU-funded STAR project are a unique resource allowing aquatic plant communities to be studied at a Pan-European scale (211 stream sites with macrophytes in 14 countries). Using this dataset, we examined the influence of organic pollution in relation to other environmental correlates of river plant community variation across Europe. We examined the relationships between several existing macrophyte metrics and nutrient enrichment, and we also explored the possibility of developing a pan-European macrophyte-based assessment system. We showed that trophic (nutrient) status is an important driver of aquatic plant communities in European rivers. We found that while most existing macrophyte metrics are useful, none can be applied at a pan-European scale in their current form. Our attempt to redesign the Mean Trophic Rank (MTR) index by the addition of further species, and the re-scoring of existing species, resulted in a considerable improvement in the relationship between MTR scores and nutrient variables. We conclude that an enlarged core group of macrophyte species can form part of an improved pan-European macrophyte-based bioassessment system, although regional modifications may be required to adequately describe the nutrient status of certain stream types. Electronic supplementary material Electronic supplementary material is available for this article at and accessible for authorised users.     

Diversity loss in the macrophyte vegetation of northwest German streams and rivers between the 1950s and 2010

This resampling study in 338 semi-permanent plots analyses changes in river macrophyte diversity in 70 water courses (small streams to medium-sized rivers) from four regions of the northwest German lowlands during the last six decades. The total macrophyte species pool decreased between the 1950s and 2010/2011 by 28% (from 51 to 37 species), mean plot-level species richness by 19% (from 4.7 to 3.8 species per relevé) and the number of red-listed species by 40% (from 30 to 18 species). Species loss was associated with marked change in species traits: species with presumably higher mechanical stress tolerance (indicated by low specific leaf area and short leaf longevity) are more abundant today. Nearly, half of the species present in the 1950s had either disappeared or been replaced by other species in the recent relevés. The dramatic impoverishment is likely a consequence of continued nutrient input that drove oligo- and mesotraphent species to extinction, and of restructuring and maintenance works in the water courses that reduced stagnant and undisturbed river habitats, where stress-intolerant species can persist. Efficient measures to reduce the nutrient load and to re-naturalise stream and river beds are urgently needed to halt and reverse the loss of macrophyte diversity.     

汉江中下游水生植物群落及演替

水生植物是河流生态系统的重要组成部分, 研究河流水生植物群落组成及演替对于河流生态系统健康诊断具有重要意义。该研究采用野外生态学研究方法, 于2013年9月和2014年6月2次对汉江中下游12个典型代表性江段的水生植物群落的组成、分布和生物量等进行调查。调查结果表明, 现阶段汉江中下游的主要水生植物共有69种, 隶属28科49属, 其中优势种主要是穿叶眼子菜(Potamogeton perfoliatus)、竹叶眼子菜(P. malaianus)、芦苇(Phragmites australis)、南荻(Triarrhena lutarioriparia)和喜旱莲子草(Alternanthera philoxeroides)等。结合早期的研究表明, 汉江中游江段沉水植物优势群落变化明显; 下游则呈现出由沉水植物群落向挺水植物群落演替的格局。挖沙和污染等人类干扰以及水位波动、河流底质和植物繁殖策略等自然因素可能是导致汉江中下游水生植物优势种变化和群落演替的主要因素。该研究结果可为汉江中下游的水生植物多样性保护和生态修复提供科学依据。     

Revealing the pathways by which agricultural land‐use affects stream fish communities in South Brazilian grasslands

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Microbial community diversity and composition varies with habitat characteristics and biofilm function in macrophyte‐rich streams

Biofilms in streams play an integral role in ecosystem processes and function yet few studies have investigated the broad diversity of these complex prokaryotic and eukaryotic microbial communities. Physical habitat characteristics can affect the composition and abundance of microorganisms in these biofilms by creating microhabitats. Here we describe the prokaryotic and eukaryotic microbial diversity of biofilms in sand and macrophyte habitats (i.e. epipsammon and epiphyton, respectively) in five macrophyte‐rich streams in Jutland, Denmark. The macrophyte species varied in growth morphology, C:N stoichiometry, and preferred stream habitat, providing a range in environmental conditions for the epiphyton. Among all habitats and streams, the prokaryotic communities were dominated by common phyla, including Alphaproteobacteria, Bacteriodetes, and Gammaproteobacteria, while the eukaryotic communities were dominated by Stramenopiles (i.e. diatoms). For both the prokaryotes and eukaryotes, the epipsammon were consistently the most diverse communities and the epiphytic communities were generally similar among the four macrophyte species. However, the communities on the least complex macrophyte, Sparganium emersum, had the lowest richness and evenness and fewest unique OTUs, whereas the macrophyte with the most morphological complexity, Callitriche spp., had the highest number of unique OTUs. In general, the microbial taxa were ubiquitously distributed across the relatively homogeneous Danish landscape as determined by measuring the similarity among communities (i.e. Sørensen similarity index). Furthermore, we found significant correlations between microbial diversity (i.e. Chao1 rarefied richness and Pielou's evenness) and biofilm structure and function (i.e. C:N ratio and ammonium uptake efficiency, respectively); communities with higher richness and evenness had higher C:N ratios and lower uptake efficiency. In addition to describing the prokaryotic and eukaryotic community composition in stream biofilms, our study indicates that 1) physical habitat characteristics influence microbial diversity and 2) the variation in microbial diversity may dictate the structural and functional characteristics of stream biofilm communities.     

The influence of channelisation on riparian plant assemblages

1. A comparative study of species diversity and assemblage patterns of herbaceous ground‐flora communities in riparian areas was performed along natural mid‐sized lowland streams and their channelised counterparts. The areas had open vegetation and were positioned along 18 similar‐sized third to fourth order stream reaches. 2. Alpha diversity was significantly higher along natural streams both at the sample plot and reach scale. Sample plot diversity peaked at intermediate distance from the natural stream reaches, whereas it increased with increasing distance from the channelised reaches. Both gamma diversity, measured and estimated from species‐area curves, and beta diversity, which is a measure of the change in diversity between areas, was similar along the two types of streams. 3. Alpha diversity correlated with several of the measured and calibrated environmental variables. The positive correlation between bank slope and alpha diversity indicates that flooding plays a key role in maintaining high levels of diversity along natural streams. 4. Species composition varied significantly between the two stream types. A cluster analysis identified four clusters of which two clusters (one and three) primarily included species associated with sample plots in areas along natural streams. Most cluster one and three species were also identified as indicator species for this stream type. 5. Canonical correspondence analysis revealed that cluster one species were less productive species associated with high total soil carbon and nitrogen contents, whereas cluster three species were highly productive species associated with high soil moisture levels, probably partly resulting from flooding. Our results suggest that distance from the stream channel imposes a probabilistic gradient that sustains co‐occurrence of these two communities in riparian areas along natural mid‐sized lowland streams.