Oligochaetes (Naididae, Tubificidae, Opistocystidae, Enchytraeidae, Sparganophilidae and Alluroididae) of Guyana

About 50 species in more than 20 genera of the microdrile oligochaete families Tubificidae, Naididae, Opistocystidae, and Enchytraeidae and the freshwater megadrile families Sparganophilidae and Alluroididae were identified in recent collections made in Guyana. Only seven species in these families were previously recorded from Guyana. The aquatic oligochaete fauna has similar components to those of the southeastern United States, other locations in South America, and across lower latitudes in the northern hemisphere. A high diversity of species is found in the naidids especially in the genera Pristina and Pristinella, especially considering the small number of locations that have been sampled. The collections include approximately 12 new species of rhyacodrilines (Tubificidae), Dero, Pristina, Pristinella (Naididae), Brinkhurstia (Alluroididae), Hemienchytraeus and Aspidodrilus (Enchytraeidae). This is the first record of Aspidodrilus from outside of Africa and the first new record since 1952.     

The Baikalian genus Rhyacodriloides in Europe: phylogenetic assessment of Rhyacodriloidinae subfam. n. within the Naididae (Annelida)

Martin, P., Martínez‐Ansemil, E. & Sambugar, B. (2010). The Baikalian genus Rhyacodriloides in Europe: phylogenetic assessment of Rhyacodriloidinae subfam. n. within the Naididae (Annelida). —Zoologica Scripta, 39, 462–482. Two new species of the oligochaete genus Rhyacodriloides Chekanovskaya, Rhyacodriloides aeternorum sp. n. and Rhyacodriloides latinus sp. n., are described from subterranean water bodies of Italy and Slovenia. A comparison with the known species of this genus, Rhyacodriloides abyssalis Chekanovskaya, 1975 and Rhyacodriloides gladiiseta Martin & Brinkhurst, 1998, both from Lake Baikal, shows that the enigmatic ‘cellular masses’ of the latter two species must be interpreted as different, not homologous structures. As a result, R. gladiiseta is to be ascribed to the Phallodrilinae, a primarily marine naidid subfamily, mentioned for the first time in Lake Baikal, and placed in its own genus, Phallobaikalus gen. n. The two new species are morphologically very similar, but their penial setae differ slightly. The phylogenetic relationships of R. latinus sp. n. and R. abyssalis within the Naididae (formerly the Tubificidae) were investigated using a combination of three genes, one nuclear (18S rDNA) and two mitochondrial (12S rDNA and 16S rDNA). A fragment of the mitochondrial COI gene, used as a barcode, also genetically characterized all Rhyacodriloides species. Sequences of 34 Naididae were obtained from EMBL, representative of five naidid subfamilies, and including five oligochaete outgroups. The data were analysed by parsimony, maximum likelihood and Bayesian inference. Taken in combination, the three genes investigated confirm that the two Rhyacodriloides species analysed are closer to each other than to any other naidid species. However, they are separated by 16S and COI distances that amount to 18.5% and 27.2%, respectively, suggesting an ancient separation between species, in good accordance with their present biogeographic distribution. Rhyacodriloides cannot be considered as a rhyacodriline, as assumed so far, as they never appeared related to this subfamily in any analysis considered. In contrast, they appear at the base of a naidid group, including the Tubificinae, the Phallodrilinae, the Limnodrilinae, as well as Branchiura sowerbyi, a species whose phylogenetic association with the rhyacodrilines has been questioned for a long time. Despite a lack of phylogenetic support, this position is congruent with a morphological reassessment of the Rhyacodrilinae, and strongly supports the erection of a new naidid subfamily to accommodate Rhyacodriloides.     

Oligochaetes (Naididae,Tubificidae, Enchytraeidae and Alluroididae) of Guyana,Peru and Ecuador

More than 41 species in 23 genera of the microdrile oligochaete families Tubificidae, Naididae, Opistocystidae, and Enchytraeidae and the freshwater megadrile family Alluroididae have been identified in recent collections made in Peru, Guyana and Ecuador. Just less than 70% of our species records are new for one or more of these countries and one is a new, albeit tentative, generic record for the South American continent. About 16 species new to science remain to be described. One of these is only the second reported species of Brinkhurstia (Alluroididae) and possesses unusual, single, very elongate penial setae. All of our species records are pertinent to tests of different hypotheses about historical and phylogenetic relationships among organisms of northern and southern South America and North America. The species, including new ones, with limited distributions are of particular significance to such hypotheses.     

A preliminary study of oligochaetes in Poyang Lake,the largest freshwater lake of China,and its vicinity,with description of a new species of Limnodrilus

The oligochaete fauna of the largest freshwater lake of China, Poyang Lake, has never been investigated before. On the basis of a preliminary survey in the lake and its vicinity in 1997–1999, 25 species belonging to 20 genera and 5 families are recorded. Among them, one genus, Cernosvitoviella (Enchytraeidae), and two species, Bratislavia unidentata (Naididae), Potamothrix bedoti (Tubificidae), are recorded from China for the first time. Another tubificid, Limnodrilus paramblysetus sp. nov., is new to science. It is similar to L. amblysetus Brinkhurst et al., 1990 in chaetal shape but differs in having short hooded penis sheaths.     

Aspects of the phylogeny of the marine Tubificidae

A tentative phylogeny of the oligochaete family Tubificidae, with emphasis on the marine representatives, is presented. The scheme is based on the morphology and arrangements of prostate glands and the setal patterns. The rhyacodriline, more or less diffuse prostates are regarded as a primitive stage in prostate evolution, preceded only by the aprostate condition assumed for the ancestor of the family. An early split of the subfamily Rhyacodrilinae supposedly led to (1) a marine branch, from which evolved the highly diverse, exclusively marine subfamilies Phallodrilinae and Limnodriloidinae, and (2) a freshwater branch, which later divided into the Telmatodrilinae, Tubificinae and Aulodrilinae. The marine subfamilies invariably lack hair setae, whereas about half of the species within the other, freshwater subfamilies possess such setae in their dorsal bundles. Some marine genera, such as Monopylephorus (Rhyacodrilinae), Tubificoides and Clitellio (both Tubificinae) are regarded as recent off-shoots from the main freshwater stock.The families Naididae and Opistocystidae are considered likely to have evolved from rhyacodriline Tubificidae, whereas Phreodrilidae, the fourth family within the suborder Tubificina, is regarded as a sister group to the Tubificidae.     

Nuevos aportes al conocimiento de los Oligoquetos del Rio Paraná Medio y algunos tributarios

This paper treats the Oligochaeta species found in the benthos of lotic, environments of the Middle Parana River, secondary channels and tributaries (29° 10’ S ‐ 59° 15’ W and 32°00’ 60°40’ W). Nineteen species of Naididae, Tubificidae, Opistocystidae, Haplotaxidae and Lumbricidae are reported. A comparative analysis of setal morphology and number for the Naididae is provided. Slavina appendiculata is redescribed, and new records from Argentina noted. Dero (Aulophorus) aff. gravelyi, Dero (Dero) palmata and Nais, bretscheri are newly recorded for South America.     

On the role of tubificid oligochaetes in relation to fish disease with special reference to the myxozoa

Whirling disease is caused by the myxozoan parasite Myxobolus cerebralis, Hofer. It has been associated with a serious decline in wild rainbow trout populations in the western United States. The alternate host is the tubificid oligochaete Tubifex tubifex, and perhaps other tubificids. Tubifex is a very adaptable taxon, being found in various morphological forms. Polyploidy has been demonstrated. There is some suspicion that sibling species may be found to exist. Infection rates in tubificids are low. Related myxosporeans are associated with a variety of aquatic oligochaete worms belonging to three families, Tubificidae, Naididae and Lumbriculidae, and also with polychaetes. Myxozoans are now recognized as members of the phylum Cnidaria. Other fish parasites, such as the cestodes Archigetes and Caryophyllaeus and the nematode Eustrongylides, are transmitted by tubificids. The tubificid worm population in an ecosystem may provide an infective reservoir as the disease persists for long periods in the worm. Control of worm populations might be achieved by reducing organic inputs, lowering erosion, increasing flow and removing objects that accumulate pockets of silt. The use of pesticides is unlikely to be effective because of a lack of specific impact and consequent disruption of the whole benthic community, at least.     

Diversity and distribution of Tubificidae, Naididae, and Lumbriculidae (Annelida: Oligochaeta) in the Netherlands: an evaluation of twenty years of monitoring data

Data from 24 water management districts and the rivers Rhine and Meuse in the Netherlands were used to study geographical distribution, relative occurrence, and environmental requirements of 76 aquatic oligochaetes (families Tubificidae, Naididae, and Lumbriculidae) (Annelida, Clitellata). Approximately 50% of the 76 species that occur in the Netherlands are uncommon, rare, or very rare. The other half of the species are common, very common or abundant. The abundant species are: Stylaria lacustris, Ophidonais serpentina, Limnodrilus claparedeianus, Limnodrilus hoffmeisteri, and Lumbriculus variegatus. With the exception of several brackish water species (those restricted in distribution to water management districts close to the sea that are influenced by salt water influx) and specific running water species (restricted mainly to the eastern part of the Netherlands), most of the species occurred throughout the whole Netherlands. The species distribution was related to environmental variables using ordination. In general, species distribution was correlated with either large waters with high chloride and phosphorus concentrations and a high hydrogen ion concentration (as pH), or with small forested (running) waters in more natural (undeveloped) areas that occasionally become intermittent. Vegetation cover was positively correlated with several swimming species in the family Naididae. While the distribution of aquatic oligochaetes in some families occurring in the Netherlands is known to some extent, the occurrence and distribution of rare and small taxa, particularly those that are difficult to identify taxonomically, is virtually unknown. Some of the rare oligochaete taxa, especially those associated with unique habitats, have received only cursory attention. Also in the data studied, the observations of the more rare species were too few to draw conclusions. To improve our knowledge of oligochaete distribution in the Netherlands, additional research should focus on rare species associated with special habitats and water types (natural areas) and those taxa in poorly known families. The standardisation of sampling and processing methodologies, particularly the use of nets and sieves with fine-meshed screening, will ensure the collection of the smaller species of oligochaetes. Subsequently, oligochaetes should be identified to species level by experienced taxonomists trained in oligochaete identification. Finally, many aquatic oligochaete species are identifiable only when sexually mature and therefore the time of year in which samples are collected is critical to the accurate representation of true oligochaete diversity at any given site. For analysing the relation between species and environmental variables the best option is to use composite data from spring and autumn.     

Protodrilus (Protodrilidae, Annelida) from the southern and southeastern Brazilian coasts

Protodrilus corderoi, Protodrilus ovarium n. sp. and Protodrilus pythonius n. sp. are reported from beaches in southern and southeastern Brazil and described combining live observations with light and electron scanning microscopy studies. Protodrilus corderoi is redescribed from new collections at the type locality, and a neotype for the species is assigned since the original type material no longer exists. New information on reproductive organs, segmental adhesive glands and unpigmented ciliary receptors as well as morphometrics is provided. Protodrilus ovarium n. sp. and P. pythonius n. sp. are formally described. Protodrilus ovarium n. sp. is diagnosed by the presence of separated lateral organs on segments 7–12, three spermioducts of segments 10–12 and salivary glands in segments 1–9. Protodrilus pythonius n. sp. is defined by the presence of separated lateral organs on segments 7–16, long pygidial lobes and body tapering toward the pygidium. The distribution of the different species in more or less spacious habitats seems to be correlated with their gross morphology. Protodrilus pythonius n. sp., with relatively long and wide body and long palps with ciliary bands, was collected in very coarse sandy sediments at a reflective sheltered beach. Conversely, P. corderoi and P. ovarium n. sp., both possessing more slender bodies with shorter, less ciliated palps, occurred in medium-coarse, well-sorted sediments in the more energetic swash zone of exposed intermediate-reflective beaches. The finding of P. pythonius and P. corderoi in nearby beaches corroborates other studies showing a higher morphological variability among species in different habitats within the same geographical area than among species in the same habitat in different geographical areas.     

Localization of 45S and 5S rDNA sites and karyotype of Chrysanthemum and its related genera by fluorescent in situ hybridization

The phylogenetic relationships among Chrysanthemum and its related genera (Anthemideae, Asteraceae) is poorly understood. In the present study, these relationships were investigated using 45S and 5S ribosomal DNA (rDNA)-targeted fluorescent in situ hybridization. The results showed that there were two 45S rDNA signals present in Crossostephium chinense, four 45S rDNA signals in Cercidiphyllum japonicum, Artemisia sieversiana, Artemisia annua and Artemisia absinthium, six 45S rDNA signals in Chrysanthemum boreale and Pyrethrum parthenium, eight 45S rDNA signals in Chrysanthemum nankingense, Chrysanthemum dichrum, Chrysanthemum lavandulifolium and Tanacetum vulgare, and ten 45S rDNA signals in Ajania przewalskii. For the 5S rDNA locus, two 5S rDNA signals were present in C. nankingense, C. dichrum, C. lavandulifolium, C. boreale, C. japonicum, C. chinense and P. parthenium, four in A. sieversiana, A. annua, A. absinthium and A. przewalskii, and six 5S in T. vulgare. In addition, karyotypes of the 12 species were investigated. From this study, we inferred that Chrysanthemum was closely related to Ajania, and that Chrysanthemum species originating from China and Japan may have evolved differently. These findings add a new level to the understanding of the phylogenetic relationships of Chrysanthemum and related genera.     

Molecular cytogenetics of the genus Artemisia (Asteraceae, Anthemideae): fluorochrome banding and fluorescence in situ hybridization. I. Subgenus Seriphidium and related taxa

The distributional pattern of AT- and GC-rich regions and the physical mapping of ribosomal DNA (location of 18S-5.8S-26S and 5S rDNA) in the chromosomes of seven Artemisia species have been established by means of fluorochrome banding and fluorescence in situ hybridization (FISH). This is the first study in the large genus Artemisia using FISH. Five species (A. barrelieri, A. caerulescens subsp. gallica, A. fragrans, A. herba-alba subsp. valentina, A. herba-alba subsp. herba-alba) belong to the subgenus Seriphidium, one of the most homogeneous in the genus; one (A. tridentata susbp. spiciformis) belongs to the small subgenus Tridentatae, classically included in Seriphidium; and one (A. annua) belongs to the subgenus Artemisia, but shows some affinities with Seriphidium. Genome organization is relatively constant in all the species studied. AT- and GC-rich DNA is predominantly terminal, but some intercalary and centromeric bands also exist. The rDNA loci are also most often terminal and usually located in GC-rich regions. 5S rDNA sites are present in a lower number than 18S-5.8S-26S sites, and are always colocated with some of them. In the light of these cytogenetic features, subgenus Seriphidium is clearly placed within the genus Artemisia, so that it does not make sense to segregate it as a genus; on the other hand, subgenus Tridentatae must not be classified within Seriphidium, but kept as an independent subgenus.     

Chromosomal localization of 45S and 5S rDNA in 14 species and the implications for genome evolution of genus Epimedium

Studying the genome structure of Epimedium has been hindered by the large genomes and uniform karyotypes. Consequently our understanding of the genome organization and evolutionary changes of Epimedium is extremely limited. In the present study, the 45S and 5S rDNA loci of 14 Epimedium species were physically mapped by double-probe FISH for the first time. Results showed the following: (1) Chromosomes I and II of all 14 species examined, except for E. shuichengense, hosted one pair of 45S rDNA sites, respectively. Most of the 45S rDNA sites gave clear signals and were positioned in the distal regions of the short arms. (2) All species studied of section Diphyllon were found to have one pair of 5S rDNA sites localized in the interstitial regions of the long arm of chromosome IV, and the two species of section Epimedium, E. alpinum and E. pubigerum, had two pairs of 5S rDNA sites localized in the interstitial regions of the long arm of chromosomes IV and V, respectively. (3) In section Diphyllon, all species of small flower taxa, except E. shuichengense, had three pairs of 45S rDNA sites, clearly more than species of big flower taxa, except E. davidii, with two pairs of 45S rDNA sites. Based on the 45S and 5S rDNA distribution patterns and other chromosomal morphological characteristics, six pairs of chromosomes can be unambiguously identified in all 14 Epimedium species. The stable differentiation in 45S and 5S rDNA FISH patterns between the two sections suggests that chromosomal rearrangements and transpositional events played a role in the splitting of the two sections, and section Diphyllon may be more primitive than section Epimedium. In the same way, big flower taxa may be more primitive than small flower taxa in section Diphyllon.     

Beyond Masses and Blooms: The Indicative Value of Oligochaetes

The European Water Framework Directive (WFD) defines a framework for assessing water bodies in Europe in the future. The conditions in the Directive impose a strong demand for “new” assessment systems. The AQEM project developed an assessment system for European streams using macroinvertebrates. Almost 900 samples were taken in about 400 streams covering 29 stream types distributed over eight countries. The role of the Oligochaeta within this European database was analysed. Almost half a million specimens of oligochaetes were collected in 772 samples. Eight families, 41 genera and 69 species were recorded, although identification emphasised the families Tubificidae and Naididae. Three countries identified oligochaetes to species level, most others restricted their identifications to easy identifiable taxa. Numbers of specimens, species, genera and families differed strongly between the countries due to method, although standardised, and taxonomic knowledge. About 50% of all collected oligochaete taxa had assigned biological and ecological indicator values for metric calculation in the AQEM assessment system. A further refinement of this indication list as well as increased coverage of oligochaete taxa was advised. Weighted averaging was used to evaluate the relation between oligochaete distribution and ecological quality class. It was concluded that when higher taxonomic levels are used in assessment, the quality evaluation results become biased. Furthermore, oligochaetes can tell us much more about the ecological status of streams than is commonly assumed. Differences in ecological optima among Limnodrilus udekemianus, Ilyodrilus templetoni, Aulodrilus pluriseta, Nais communis, and Spirosperma ferox are shown.     

Ribosomal RNA Cistrons of X Chromosomes Clonally Derived from D. MELANOGASTER Laboratory Populations: Redundancy, Organization and Stability

To determine whether heterogeneity exists in the organization or redundancy of the rRNA cistrons of inbred populations of Drosophila melanogaster, we have derived a number of sublines from the strains Oregon R and Canton S. These two strains were chosen because our previous studies have demonstrated a difference in the competence of these strains to exhibit a "compensatory response" of the rDNA. In each subline, the X chromosomes are descended from a single maternal X, that is, each line is homozygous for a particular nucleolus organizer (NO). These derivative lines have been characterized in terms of rDNA content and organization, using quantitative liquid hybridizations and Southern blot analyses, respectively. Our studies reveal that both of the highly inbred parent populations contained a heterogeneous array of X chromosomal rDNA contents. Once isogenized, the rDNA redundancy of a given X chromosomal NO can be shown to remain stable for at least 20 generations in culture. We detect no restriction pattern heterogeneity among X chromosomes isolated from a given strain, despite relatively large differences in their rDNA contents. This leads us to suggest that there is no significant clustering of intervening sequence-bearing (ivs ⁺) genes within the rDNA loci of chromosomes from the populations examined. Furthermore, we conclude that apparent alterations in rDNA redundancy known as the compensatory response are not related to the heterogeneity of rDNA content within a population.     

Phylogeny of Cucurbitaceae species in Korea based on 5S rDNA non-transcribed spacer

The 5S rDNA coding region and its spacer have been successfully utilized in phylogenetic studies of plants. However, it has not been utilized in the phylogenetic analysis of Cucurbitaceae. Here, we obtained the 5S rDNA sequences of 12 Cucurbitaceae species by direct PCR or cloning. The 5S rDNA sequences ranged from 275 to 359 bp, and the coding regions of all species were 120 bp long, except for that of Cucurbita, which was 119 bp. Some genus-specific SNPs were observed in the coding regions of Cucurbita, Lagenaria, Melothria, and Tricosanthes. The GC content of the coding regions was generally higher than that of the NTS regions, and the difference in GC content between the coding and NTS regions varied among species, with Gynostemma pentaphyllum having the greatest difference of 20.3. The phylogenetic trees generated using maximum parsimony and maximum likelihood were congruent and well supported by the recently published classification of Cucurbitaceae. These results demonstrated the utility of the 5S rDNA sequence in inferring phylogenetic relationships among 12 Cucurbitaceae species, and its utility could be extended by using a greater number of species in future studies.     

On the value of nuclear and mitochondrial gene sequences for reconstructing the phylogeny of vanilloid orchids (Vanilloideae, Orchidaceae)

Background and Aims

Most molecular phylogenetic studies of Orchidaceae have relied heavily on DNA sequences from the plastid genome. Nuclear and mitochondrial loci have only been superficially examined for their systematic value. Since 40% of the genera within Vanilloideae are achlorophyllous mycoheterotrophs, this is an ideal group of orchids in which to evaluate non-plastid gene sequences.

Methods

Phylogenetic reconstructions for Vanilloideae were produced using independent and combined data from the nuclear 18S, 5·8S and 26S rDNA genes and the mitochondrial atpA gene and nad1b-c intron.

Key Results

These new data indicate placements for genera such as Lecanorchis and Galeola, for which plastid gene sequences have been mostly unavailable. Nuclear and mitochondrial parsimony jackknife trees are congruent with each other and previously published trees based solely on plastid data. Because of high rates of sequence divergence among vanilloid orchids, even the short 5·8S rDNA gene provides impressive levels of resolution and support.

Conclusions

Orchid systematists are encouraged to sequence nuclear and mitochondrial gene regions along with the growing number of plastid loci available.Key words: 26S rDNA, 18S rDNA, 5·8S rDNA, atpA, nad1, orchids, plastid, Vanilla, vanilloid orchids, Vanilloideae     

Genetic Diversity and Phylogeny of Rhizobia That Nodulate Acacia spp. in Morocco Assessed by Analysis of rRNA Genes

Forty rhizobia nodulating four Acacia species (A. gummifera, A. raddiana, A. cyanophylla, and A. horrida) were isolated from different sites in Morocco. These rhizobia were compared by analyzing both the 16S rRNA gene (rDNA) and the 16S-23S rRNA spacer by PCR with restriction fragment length polymorphism (RFLP) analysis. Analysis of the length of 16S-23S spacer showed a considerable diversity within these microsymbionts, but RFLP analysis of the amplified spacer revealed no additional heterogeneity. Three clusters were identified when 16S rDNA analysis was carried out. Two of these clusters include some isolates which nodulate, nonspecifically, the four Acacia species. These clusters, A and B, fit within the Sinorhizobium lineage and are closely related to S. meliloti and S. fredii, respectively. The third cluster appeared to belong to the Agrobacterium-Rhizobium galegae phylum and is more closely related to the Agrobacterium tumefaciens species. These relations were confirmed by sequencing a representative strain from each cluster.     

Phylogeny of Heterokonta: Incisomonas marina,a uniciliate gliding opalozoan related to Solenicola (Nanomonadea), and evidence that Actinophryida evolved from raphidophytes

Environmental rDNA sequencing has revealed many novel heterokont clades of unknown morphology. We describe a new marine heterotrophic heterokont flagellate, Incisomonas marina, which most unusually lacks an anterior cilium. It glides and swims with its cilium trailing behind, but is predominantly sedentary on the substratum, with or without a cilium. 18S rDNA sequence phylogeny groups Incisomonas strongly within clade MAST-3; with others it forms a robust sister clade to Solenicola, here grouped with it as new order Uniciliatida, placed within new class Nanomonadea encompassing MAST-3. Our comprehensive maximum likelihood heterokont phylogeny shows Nanomonadea as sister to MAST-12 plus Opalinata within Opalozoa, and that Actinophryida are not Opalozoa (previously suggested by distance trees), but highly modified raphidomonads, arguably related to Heliorapha (formerly Ciliophrys) azurina gen., comb. n. We discuss evolution of Actinophryida from photosynthetic raphidophytes. Clades MAST-4,6-11 form one early-branching bigyran clade. Olisthodiscus weakly groups with Hypogyristea not Raphidomonadea. Phylogenetic analysis shows that MAST-13 is all Bicosoeca. Some gliding uniciliates similar to Incisomonas marina seem to have been misclassified: therefore we establish Incisomonas devorata comb. n. for Rigidomastix devoratum, revise the genus Rigidomastix, transfer Clautriavia parva to Kiitoksia. We make 17 new familes (13 heterokont (three algal), two cercozoan, two amoebozoan).     

Nuclear 28S rDNA phylogeny supports the basal placement of Noctiluca scintillans (Dinophyceae; Noctilucales) in dinoflagellates

Noctiluca scintillans (Macartney) Kofoid et Swezy, 1921 is an unarmoured heterotrophic dinoflagellate with a global distribution, and has been considered as one of the ancestral taxa among dinoflagellates. Recently, 18S rDNA, actin, α-, β-tubulin, and Hsp90-based phylogenies have shown the basal position of the noctilucids. However, the relationships of dinoflagellates in the basal lineages are still controversial. Although the nuclear rDNA (e.g. 18S, ITS-5.8S, and 28S) contains much genetic information, DNA sequences of N. scintillans rDNA molecules were insufficiently characterized as yet. Here the author sequenced a long-range nuclear rDNA, spanning from the 18S to the D5 region of the 28S rDNA, of N. scintillans. The present N. scintillans had a nearly identical genotype (>99.0% similarity) compared to other Noctiluca sequences from different geographic origins. Nucleotide divergence in the partial 28S rDNA was significantly high (p<0.05) as compared to the 18S rDNA, demonstrating that the information from 28S rDNA is more variable. The 28S rDNA phylogeny of 17 selected dinoflagellates, two perkinsids, and two apicomplexans as outgroups showed that N. scintillans and Oxyrrhis marina formed a clade that diverged separately from core dinoflagellates.     

Ultrastructure of phaosomous photoreceptors in Stylaria lacustris (Naididae, ‘Oligochaeta’, Clitellata) and their importance for the position of the Clitellata in the phylogenetic system of the Annelida

Many species of Naididae possess a pair of pigmented eyes. Within Clitellata, eyes are generally present in Hirudinea, whereas Naididae are the only oligochaete taxon having these sense organs. The eyes of Naididae are epidermal structures and consist of a multicellular pigment cup in which a single row of five to six photoreceptor cells is embedded. The sensory cells are typical phaosomes: the photoreceptive structures (microvilli) project into a cavity formed by the sensory cell itself. In Stylaria lacustris this cavity opens to the exterior, clearly documenting that it represents an invagination of the apical cell membrane. The density of sensory microvilli is comparatively low and a central vitreous body is lacking. Similar phaosomous photoreceptors, not associated with either pigmented or unpigmented supporting cells, occur in the epidermis of the anterior end. These photoreceptors correspond to those found in other Clitellata, confirming that phaosomes are the only known type of photoreceptor cell occurring in this taxon. As a result of their simple structure they have been regarded as plesiomorphic for Annelida. However, an out‐group comparison with eyes and photoreceptors occurring in polychaetes and other spiralians reveals that they, in fact, are a rather specialized type of photoreceptor. Despite the simple structure, they most likely represent an autapomorphy of Clitellata. It follows that in all probability, these phaosomes are a secondarily evolved type of photoreceptor, which arose within the oligochaete clade after the primary photoreceptors present in the out‐groups had been lost. This loss might have occurred during evolution of a burrowing life style within the sediment and subsequent invasion of the terrestrial environment.