Morphological and functional seed traits of the wild medicinal plant Dioscorea strydomiana,the most threatened yam in the world

• Morphological and functional seed traits have important roles in characterising the species regeneration niche and help to understand the reproductive biology of rare and threatened plants, which can thus support appropriate plant conservation measures.
• Seed morphometric and dispersal kinetics of the critically endangered Dioscorea strydomiana were measured and compared with those of four other Dioscorea species, and seed germination response under constant temperatures (5–35 °C) was compared with that of the congeneric and widespread D. sylvatica.
• Seed mass of D. strydomiana (ca. 14 mg) was twice that of D. sylvatica, but similar to or smaller than the other species examined. Seeds of D. strydomiana have the lowest speed of descent and lowest variability in most of the morphological traits considered, suggesting lower phenotypic plasticity but higher variance in the wing‐loading value. Seeds of D. strydomiana reached maximum germination at 15 °C (ca. 47%), which decreased slightly to ca. 37% at 25 °C and was completely inhibited at 35 °C. D. sylvatica seeds started to germinate at 10 °C (ca. 3%), reached 75–80% germination at 15–20 °C and maximum (ca. 90%) at 25–30 °C. Base temperatures for germination (T_b) were 9.3 and 5.7 °C, for D. strydomiana and D. sylvatica, respectively. Due to the higher germination percentages of D. sylvatica, ceiling and optimum temperatures could also be modelled for this species, suggesting higher sensitivity to high temperature for seeds of D. strydomiana.
• The detected poor seed lot quality of D. strydomiana suggests difficulties in reproduction from seed, highlighting the need for further investigation and conservation actions for this threatened yam species.

     

The two giant sister species of the Southern Ocean, <Emphasis Type="Italic">Dissostichus eleginoides</Emphasis> and <Emphasis Type="Italic">Dissostichus mawsoni</Emphasis>, differ in karyotype and chromosomal pattern of ribosomal RNA genes

The two giant notothenioid species, the Patagonian toothfish Dissostichus eleginoides and the Antarctic toothfish D. mawsoni, are important components of the Antarctic ichthyofauna and heavily exploited commercially. They have similar appearance and size, both are piscivorous and bentho-pelagic, but differ in their geographic distribution and absence/presence of the antifreeze trait. We karyotyped these two sister species by analyzing specimens collected from multiple Antarctic and sub-Antarctic sites. Both species have a diploid number of 48, but differ in karyotypic formula, (2m + 2sm + 44a) for D. eleginoides and (2m + 4sm + 42a) for D. mawsoni, due to an extra pair of submetacentric chromosomes in the latter. Chromosomal fluorescence in situ hybridization with rDNA probes revealed unexpected species-specific organization of rRNA genes; D. mawsoni possesses two rDNA loci (versus one locus in D. eleginoides), with the second locus mapping to its additional submetacentric chromosome. The additional rRNA genes in D. mawsoni may be a cold-adaptive compensatory mechanism for growth and development of this large species in freezing seawater.     

Characterization and distribution of <Emphasis Type="Italic">Daucus</Emphasis> species in Syria

Syria is considered as one of the important centres for Daucus diversity including Daucus carota. Therefore, it is essential to study the distribution and characterization of these species in Syria. An exploration of plants belonging to the Apiaceae family was conducted on road and field sides in several areas of Syria. Seeds (fruits) from these plants have been also collected. The seeds were sown in pots containing peatmoss in a glasshouse and emerging plants were grown until flowering and seed formation. The plants were classified based on leaf, umbel, and seed shape. Proteins were extracted from the leaves and analysed using electrophoresis to establish genetic relationships among species. Seven Daucus species have been identified to grow in Syria. These are D. aureus, D. bicolor, D. carota, D. durieua, D. guttatus, D. littoralis, and D. muricatus. Isozyme and total protein analysis, cluster analysis, and correlation matrix have revealed considerable genetic variation among studied Daucus species. Wild carrot (D. carota) came in one group with its cultivated form (D. carota ssp. sativus) and the closest species to them was D. guttatus. Species D. bicolor and D. durieua were in the same group and D. aureus and D. littoralis were in another group farther from the previous groups. The farthest species on the genetic tree was D. muricatus.     

A revision of the Haploporinae Nicoll, 1914 (Digenea: Haploporidae) from mullets (Mugilidae): <Emphasis Type="Italic">Dicrogaster</Emphasis> Looss, 1902 and <Emphasis Type="Italic">Forticulcita</Emphasis> Overstreet, 1982

The status of the nominal species of Dicrogaster is re-assessed by means of a comparative morphological study based on newly collected material from the western Mediterranean and a critical evaluation of the published data. D. perpusilla Looss, 1902 (type-species) and D. contracta Looss, 1902 are redescribed on the basis of new material from Liza spp. D. fragilis Fernández Bargiela, 1987 is considered a junior synonym of D. fastigata Thatcher & Sparks, 1958 and D. maryutensis Al-Bassel, 1990 is considered to be nomen nudum. A key to the recognised species of Dicrogaster is presented. A new species of Forticulcita Overstreet, 1982 is described from Mugil cephalus L. in the Spanish Mediterranean and differentiated from the type-species, F. glabra Overstreet, 1982, and the recently described F. mugilis Hassanine, 2007 by its significantly smaller body size and most of its metrical data. The new species, F. gibsoni n. sp., is characterised by a narrow ‘neck’ region anterior to the genital pore and a long striated ‘tail’ region in the hindbody which is devoid of organs, such that the bulk of the uterus is restricted to the anterior half of the hindbody and the testis is located more anteriorly. F. gibsoni differs from F. glabra in having a longer forebody, smaller sucker width ratio and larger eggs, and from F. mugilis in having a smaller sucker width ratio, a hermaphroditic sac much longer than the ventral sucker and smaller eggs. The three Mediterranean forms, D. perpusilla, D. contracta and F. gibsoni are further distinguished by multivariate analyses. Keys to the species of both genera are presented.

---

Restoring <Emphasis Type="Italic">Daphnia lacustris</Emphasis> G.O. Sars, 1862 (Crustacea,Anomopoda): a cryptic species in the <Emphasis Type="Italic">Daphnia longispina</Emphasis> group

While molecular markers have revealed several distinct species within the Daphnia longispina group, there is a need to reconcile these species with traditional nomenclature. Here we show that one such species, called D. longispina in recent literature based on molecular markers, can reliably be associated with the described taxon Daphnia lacustris G.O. Sars, 1862. Both mitochondrial and nuclear molecular markers readily distinguish this species from others in the D. longispina group. D. lacustris is absent in the region from which D. longispina was first described (Denmark), and the designation D. longispina must be reserved for another widespread species represented by Danish lineages. While the diagnosis of D. lacustris (and other species of the D. longispina group) by molecular markers is unequivocal, distinguishing it morphologically from other species is still problematic. The presently known distribution range of D. lacustris includes most of Norway, northern Finland and a single lake in the Polish Tatra Mountains. Its typical habitat is oligotrophic lakes without intense fish predation. Guest editor: Piet Spaak Cladocera: Proceedings of the 7th International Symposium on Cladocera     

New records of rare derogenids (Digenea: Hemiuroidea) from Mediterranean sparids,including the description of a new species of <Emphasis Type="Italic">Magnibursatus</Emphasis> Naidenova, 1969 and redescription of <Emphasis Type="Italic">Derogenes adriaticus</Emphasis> Nikolaeva, 1966

Records of derogenid digeneans in the Mediterranean and Black Sea region are scarce and tend to be restricted to a small number of host-groups, but especially to sparid fishes. This work reports on the presence of derogenine and halipegine derogenids from two sparids, Diplodus annularis (L.) and D. sargus (L.), from off the Mediterranean coast of Spain. Five derogenid forms were recovered. Derogenes adriaticus Nikolaeva, 1966 is redescribed from Diplodus annularis, and Derogenes sp. is described from the same host but differentiated from the former species. Magnibursatus barretti n. sp. is described from Diplodus sargus and distinguished from other species of the genus especially by its smaller body size and smaller eggs. M. bartolii Kostadinova, Power, Fernández, Balbuena, Raga & Gibson, 2003 is redescribed from D. sargus, a new host for this species. A single specimen from D. sargus, somewhat similar to M. minutus Kostadinova, Power, Fernández, Balbuena, Raga & Gibson, 2003, is also described, as it exhibits some morphometric differences from the latter species.     

<Emphasis Type="Italic">Duranta neblinensis</Emphasis> (Verbenaceae,Duranteae): A new species from Sierra de la Neblina,Amazonas state,Venezuela

Duranta neblinensis, from Sierra de la Neblina, Amazonas state, Venezuela is described, illustrated, and its morphological relationships with allied species are discussed. This new species is similar to D. obtusifolia, but it differs by its stout spines; pubescent petioles and leaves; apiculate calyx lobes; and fruits with an open, slender, curved rostrum . An updated key to the six Venezuelan species of Duranta is presented, and phytogeographic information about Sierra de la Neblina is provided.     

<Emphasis Type="Italic">Diplectanocotyla</Emphasis> Yamaguti, 1953 (Monogenea: Diplectanoidea) from <Emphasis Type="Italic">Megalops cyprinoides</Emphasis> (Broussonet) (Teleostei: Megalopidae) off Peninsular Malaysia

Two known and two new species of Diplectanocotyla Yamaguti, 1953 (D. gracilis Yamaguti, 1953, D. megalopis Rakotofiringa & Oliver, 1987, D. langkawiensis n. sp. and D. parva n. sp.) were collected from Megalops cyprinoides (Megalopidae) off Langkawi, Kedah and Matang, Perak, Peninsular Malaysia. All four species possess similar types of sclerotised male and female reproductive structures and similar soft anatomical features. The squamodisc sclerites of all four species have spine-like projections with varying degrees of visibility and shapes (sharp-pointed to triangular). In D. megalopis and D. langkawiensis n. sp. the spines are sharp-pointed and distinct on sclerites from rows 5–6 onwards. In D. gracilis and D. parva n. sp. the sclerite spines are triangular, lightly sclerotised and occur on almost all of the sclerites. D. parva n. sp. has comparatively the smallest set of anchors, bars, squamodiscs and squamodisc suckers. The anchors and bars of the other three species are almost similar in overall size, and the main distinguishing feature is the relative lengths of the inner and outer roots of the ventral anchors. In D. gracilis the outer root is very much smaller than the inner root and they are disposed almost at a right angle to each other. In D. megalopis the outer root is usually about half the length of the inner root and the roots are inclined at c.60° to each other. In D. langkawiensis n. sp. the roots are inclined at c.40° degrees and the outer root is of a similar length or only slightly shorter than the inner root. The openings of the two squamodisc suckers of all four Diplectanocotyla species are surrounded by tiny scale-like spines. Bifid tegumental spines are found in the posterior region of all four species, differing only in their extent: in D. parva n. sp. the tegumental spines are only distributed in the peduncular region and not beyond, whilst in the other three species the tegumental spines extend from the posterior level of the testis to the end of the peduncle. An amended diagnosis of Diplectanocotyla and a key to its species are appended.     

<Emphasis Type="Italic">Kazachstania wufongensis</Emphasis> sp. nov., an ascosporogenous yeast isolated from soil in Taiwan

A new yeast species, Kazachstania wufongensis, is proposed in this paper based on six strains isolated from soil in Taiwan. The species may produce one to four ellipsoidal ascospores in each ascus, directly transformed from diploid cells. Genus assignment and distinction of the species from other recognized species of Kazachstania is based on morphological and physiological characteristics, and on phylogenetic analysis of nucleotide sequences of the D1/D2 domains of the large subunit (LSU) rRNA gene. Sequence analysis of the D1/D2 domains of the LSU rRNA gene reveals that K. wufongensis is a member of the Kazachstania exigua complex, and its phylogenetically closest relatives are K. exigua, K. barnettii, K. bulderi, and K. turicensis. The species can be further differentiated from the other phylogenetically related species based on internal transcribed spacer sequence and electrophoretic karyotype. Therefore, the new species Kazachstania wufongensis sp. nov. is proposed. The type strain of this new species, which was isolated from forest soil in Wufong, Hsinchu, Taiwan, is FN21S03^T (=CBS 10886^T = BCRC 23138^T).     

Filamentous cyanobacteria,temperature and <Emphasis Type="Italic">Daphnia</Emphasis> growth: the role of fluid mechanics

Viscosity increases significantly with a fall in water temperature, thus temperature change affects not only the metabolic rates of aquatic suspension feeders, but also the physical properties of the surrounding fluid. This mechanistic effect of water temperature change on growth was separated from the effect of metabolism by using culture media with modified viscosity, while the temperature was kept constant. The effect of water viscosity on growth rate and feeding of four Daphnia species (D. magna, D. pulicaria, D. hyalina, D. galeata) was investigated. Increased viscosity decreased the growth rate significantly for three species, with the exception of D. galeata. Changing viscosity also affects growth qualitatively: the filamentous blue-green Cylindrospermopsis raciborskii reduces the growth rate of D. pulicaria at low viscosity, but its negative effect disappears when viscosity is higher. The findings are consistent with the hypothesis that it is the Reynolds number of the filtering appendages that determines the qualitative features of Daphnia filtration. The edibility of C. raciborskii at high water viscosity is most probably caused by lack of interference with filtering combs, and explains the coexistence of D. pulicaria with filamentous blue-green species in the field, and also the observed temperature dependence of growth inhibition of filaments.Electronic Supplementary Material Supplementary material is available for this article at     

Cold hardiness,adaptive strategies,and invasion of slugs of the genus <Emphasis Type="Italic">Deroceras</Emphasis> (Gastropoda,Pulmonata) in northeastern Asia

Abstract-Four species of slugs have been identified in the vicinity of Magadan: Deroceras laeve, D. altaicum, D. reticulatum, and D. agreste. They exemplify three different life cycle schemes, with D. reticulatum and D. altaicum wintering at the egg phase; D. laeve, at the slug phase; and D. agreste, at either phase. The D. altaicum and D. reticulatum slugs and D. laeve eggs are intolerant of subzero temperatures. D. laeve’s tolerate freezing and survive at temperatures below −28°C. The eggs of other species, which lose up to 35% of water upon cooling, can withstand temperatures as low as −15 to −17°C (D. altaicum), −25°C (D. agreste), and −35°C (D. reticulatum). According to preliminary data, D. agreste slugs survive at temperatures down to −10°C. The almost ubiquitous distribution of D. laeve in regions with cool summers (including zonal tundras) is accounted for not so much by the high rate of ontogeny as by its significant cold hardiness and ability to winter at different phases of the life cycle (except for the egg phase), which allows the period of development to be prolonged for the next seasons. The last is confirmed by the fact that the slugs collected before and after hibernation proved to have identical patterns of distribution by body weight. Three species of slugs introduced in the vicinity of Magadan fail to spread inland. In the case of D. reticulatum, this is explained primarily by the fact that the frost-free season in inland areas is too short to allow these slugs to complete ontogeny and lay eggs. The barriers to their expansion appear to be insuperable, since this process remains unsuccessful over no less than 75–80 years.     

Crowding‐induced changes in growth,reproduction and morphology of Daphnia

• 1 Daphnia may reach high population densities seasonally, or in patches, in lakes. To test the effects of chemicals released by high daphniid densities on their life‐history traits, nine species of Daphnia, D. magna, D. pulicaria, D. pulex, D. hyalina, D. galeata, D. laevis, D. lumholtzi, D. ambigua and D. cucullata, were grown in water from crowded Daphnia cultures in a flow‐through system in the presence of abundant food.
• 2 Water from Daphnia at 85 L^‐1 depressed growth rate, and lowered body size and clutch at first reproduction of six species of small‐bodied Daphnia (adult body length < 1.8 mm), but had no significant effects on larger species. Two clones of D. pulex differed in their growth rate in response to crowding, indicating that response patterns may vary within species.
• 3 Chemicals released by crowded D. magna reduced tail spine length in D. lumholtzi and D. cucullata by 37% and 11%, respectively, and induced changes in carapace morphology in D. lumholtzi and D. ambigua.
• 4 Chemicals released by crowded conspecifics may provide an additional, density‐dependent mechanism of population regulation; when large species of Daphnia coexist at a high population density with small species, these chemicals may reinforce the competitive advantage of large species.

     

Detection of a new <Emphasis Type="Italic">Arsenophonus</Emphasis>-type bacterium in Canadian populations of the Rocky Mountain wood tick, <Emphasis Type="Italic">Dermacentor andersoni</Emphasis>

Ticks of the genus Dermacentor are important vectors of human and animal pathogens in North America. They also carry a variety of endosymbiotic (i.e. non-pathogenic) bacteria. The American dog tick, D. variabilis, is known to be infected with gammaproteobacteria of the genus Arsenophonus. However, there have been no previous reports of Arsenophonus-type bacteria in the Rocky Mountain wood tick, D. andersoni, a species that is sympatric with D. variabilis in the western parts of its distributional range. In this study, the presence of Arsenophonus-type bacteria was determined by PCR and DNA sequencing for 338 D. andersoni and 448 D. variabilis adults from western Canada. Fifty-one (15%) of the D. andersoni were found to be infected with Arsenophonus, whereas only a single D. variabilis was infected. The prevalence of Arsenophonus in D. andersoni varied among localities (0–27%). The 16S rDNA sequences of Arsenophonus in Canadian D. andersoni and D. variabilis were identical to one another, but the results of a phylogenetic analysis showed that they were genetically distinct from, and may represent a different species to, the Arsenophonus in D. variabilis and Amblyomma americanum in eastern USA.     

Cloning,expression in yeast,and functional characterization of CYP71D14, a root-specific cytochrome P450 from <Emphasis Type="Italic">Petunia hybrida</Emphasis>

Alkaloids, which are naturally occurring amines, are biosynthesized and accumulated in plant tissues such as roots, leaves, and stems. Many alkaloids have pharmacological effects on humans and animals. Cytochrome P450 (P450 or CYP) monooxygenases are known to play key roles in the biosynthesis of alkaloids in higher plants. A cDNA clone encoding a P450 protein consisting of 502 amino acids was isolated from Petunia hybrida. The deduced amino acid sequence of the cDNA clone showed a high level of similarity with the other P450 species in the CYP71D family; hence, this novel P450 was named CYP71D14. Among plant P450 species, CYP71D14 had 45.7% similarity in its amino acid sequence to CYP71D12, which is involved in the biosynthesis of the indole alkaloids vinblastine and vincristine. Expression of CYP71D14 mRNA in Petunia plants was examined by Northern blot analysis by using a full-length cDNA of CYP71D14 as a probe. CYP71D14 mRNA was expressed most abundantly in the roots. The nucleotide sequence of CYP71D14 has been submitted to the DDBJ, EMBL, and GenBank nucleotide databases under the accession number AB028462. An erratum to this article can be found at     

Reduced Selection for Codon Usage Bias in <Emphasis Type="Italic">Drosophila miranda</Emphasis>

Biased codon usage in many species results from a balance among mutation, weak selection, and genetic drift. Here I show that selection to maintain biased codon usage is reduced in Drosophila miranda relative to its ancestor. Analyses of mutation patterns in noncoding DNA suggest that the extent of this reduction cannot be explained by changes in mutation bias or by biased gene conversion. Low levels of variability in D. miranda relative to its sibling species, D. pseudoobscura, suggest that it has a much smaller effective population size. Reduced codon usage bias in D. miranda may thus result from the reduced efficacy of selection against newly arising mutations to unpreferred codons. [Reviewing Editor: Dr. Richard Kliman]     

New species of <Emphasis Type="Italic">Diphymyces</Emphasis> (Laboulbeniales,Ascomycota)

Four new species of Diphymyces parasitic on Leiodidae Cholevinae are described. These are D. arnaudii parasitic on Nemadiopsis spp. (Anemadini) from Chile, D. giachinoi parasitic on Nargiotes spp. (Anemadini) from Australia, D. pavicevicii parasitic on Pholeuonopsis magdelainei (Leptodirini) from Serbia, and D. pusillus parasitic on Adelopsis bioforestae (Ptomaphagini) from Ecuador.     

THE REPRODUCTIVE RELATIONSHIPS OF DROSOPHILA SECHELLIA WITH D. MAURITIANA,D. SIMULANS,AND D. MELANOGASTER FROM THE AFROTROPICAL REGION

Hybridization tests among the four sibling species of the Drosophila melanogaster complex were made to determine the reproductive status of the recently discovered D. sechellia (which is endemic to a few islands and islets of the Seychelles archipelago) with regard to its three close relatives, D. mauritiana (endemic to Mauritius) and Afrotropical strains of the two cosmopolitan species D. melanogaster and D. simulans. Interstrain variation in the ability to hybridize with other species was also analyzed for D. melanogaster and D. simulans. D. mauritiana and D. simulans appear to be more weakly isolated from each other than either species is from D. sechellia. A striking unilateral mating success is observed in the cross of D. sechellia with D. simulans. The most extreme isolation is between D. melanogaster and its three siblings. Variation in the ability of strains to hybridize is observed in heterospecific crosses between D. simulans and either D. melanogaster or D. mauritiana.     

Three new species,a new combination,and a neotypification in <Emphasis Type="Italic">Dahlstedtia</Emphasis> (Leguminosae,Millettieae, Papilionoideae) from South America

Three new species of Dahlstedtia, D. burkartii, D. dehiscens, and D. lewisiana, are described from South America, and their relationships with related species are discussed. Dahlstedtia burkartii, from Argentina, has pink flowers with standard straight, whereas D. dehiscens and D. lewisiana, both from Brazil, have purplish to lilac flowers with a reflexed standard petal. A new combination, Dahlstedtia peckoltii, is proposed based on Lonchocarpus peckoltii and a neotype is selected for the latter. Information about geographic distribution and phenology of the species is provided.     

<Emphasis Type="Italic">Metarhizium taii var. chongqingensis</Emphasis> Nov., Anamorph of <Emphasis Type="Italic">Cordyceps</Emphasis><Emphasis Type="Italic">chongqingensis</Emphasis> sp. Nov. Isolated from a Low Altitude Area in Chongqing,China

Previously, a new Cordyceps species was isolated from a low altitude area in Chongqing, China, and named Cordyceps chongqingensis sp. nov. In this study, its anamorph was isolated and designated CQM1^T. It grew optimally on Czapek medium supplied with 0.5% silkworm flour and 0.5% soybean oil meal at 25°C, pH 5.0–5.5. The phenotypic and molecular characteristics were investigated for its identification and typing. Morphological observations under a microscope revealed that this anamorph of Cordyceps chongqingensis sp. nov. was a new species of Metarhizium. Moreover, it was identified as one of the variants of Metarhizium taii based on sequences of 26S rDNA D1/D2 and ITS regions, and thus named Metarhizium taii var. chongqingensis nov.