Multi-attribute ecological river typology for assessing ecological condition and conservation planning

A river classification framework is needed to make good management and planning decisions about river health and biodiversity. We developed a multi-attribute ecological river typology to address this need in the Australian State of New South Wales (801,428 km²). Multivariate patterns in data collected from 322 reference sites were used to define river types for each attribute: abiotic features (10 types), fish assemblages (6 types) and macroinvertebrate assemblages from river edges (8 types) and riffle zones (5 types). We used classification tree analysis to define broad regions for each attribute and then to construct identification keys for river types within each region using slope, elevation, maximum distance from source, latitude and mean annual rainfall. These keys allow the mapping of the likely spatial extent of river types and the assignment of a multi-attribute river-type identity to a river reach anywhere in the State. We used the average dissimilarity distances among the river types and the rates of misclassification of reference sites to assess the reliability of the assignments for different attributes in different regions. This approach to river classification can be applied anywhere in the world, resulting in simple to highly complex typologies depending on data availability. In data-poor areas it may result in a single attribute typology based on remotely derived variables and a coarsely defined reference condition. In data-rich areas the typology may have a large number of attributes using very large datasets with high resolution. Handling editor: D. Dudgeon     

Advancing marine conservation planning in the Mediterranean Sea

Twenty leading scientists in the field of marine conservation planning attended the first international workshop on conservation planning in the Mediterranean Sea. This globally significant biodiversity hotspot has been subjected to human exploitation and degradation for 1,000s of years. Recently, several initiatives have tried to identify priority areas for conservation across the Mediterranean Sea. However, none of these efforts have led to large-scale actions yet. The aim of the workshop was to establish a network of scientists who are involved in large-scale conservation planning initiatives throughout the Mediterranean basin to promote collaboration and reduce redundancy in conservation initiatives. The three focus groups of the workshop build on existing efforts and intend to deliver: (1) a roadmap for setting conservation priorities, (2) a methodological framework for linking threats, actions and costs to improve the prioritization process, and (3) a systematic conservation planning process tailored to complex environments such as the Mediterranean Sea. Joining forces and involving more scientists (especially from the South-eastern part of the region) in following meetings, the participants endeavour to provide guidelines on how to bridge the science-policy gap and hence aid decision-makers to take efficient conservation actions.     

Comparing alternative systematic conservation planning strategies against a politically driven conservation plan

Decisions regarding the level of detail included in conservation planning and the importance given to feasibility considerations can greatly influence management in terms of total area required, achievement of conservation targets and costs. This work had two main objectives: (1) to compare priority sites proposed by the Chilean commission for the environment in a politically driven process to the results of alternative systematic conservation planning scenarios; and (2) to compare the efficacy of systematic conservation planning based on different types of conservation targets (forest types and bird species) and minimum area thresholds. To address these issues, we used vegetation cover as well as field data on forest birds in central Chile. Bird species distributions were modeled using a variety of climatic and environmental layers, allowing for the integration of environmental heterogeneity into the planning process. We then ran several conservation planning scenarios considering conservation targets based on vegetation types alone, birds alone, or a combination of vegetation and birds. Collectively these results show that conservation planning results differ significantly when considering birds or vegetation types, and that minimum area requirements for each conservation feature has a great influence on the final results. Moreover, important conservation sites are not represented in the current government plan, and these sites are related to the small representation of rare vegetation types. This study suggests that using appropriate minimum area requirements can greatly affect the results of a conservation planning exercise and therefore represents a key knowledge gap in the region.     

Radiation interception and modelling as an alternative to destructive samples in crop growth measurements

Growth analysis presently uses destructive samples to detect temporal variations in biomass. The destructive nature of the measurements, their cost, and statistical considerations limit the application of growth studies in many domains of crop science. In contrast radiation interception data are cheap and easy to obtain without destruction of experimental material. Biomass may be modelled as the product of cumulative radiation intercepted by the crop [ΣI] and a radiation use efficiency coefficient [e]. Therefore, in theory, an alternative to destructive samples is provided by measurement of I at intervals during growth and e. The success of this approach depends on the validity of the value of e and its constancy through time. With measurement of I at intervals the mean radiation use efficiency [Σ] can be estimated from the seasonal ΣI and the final harvest data. The Σ can then be used with the time series data for ΣI to estimate the biomass for that plot for any date. To test this approach model-derived biomass data were compared with data from destructive samples at seven dates for six groundnut germplasm lines grown in water limiting and fully irrigated conditions. The model-derived data was consistently less than destructively obtained data when the plants were small. This bias was an artifact of the interception measurement technique used not being accurate for small plants. Once plants were tall enough for fractional interception to be measured without substantial error, the nondestructive method effectively described the growth of the well-watered crops. For the drought treatments, it was less effective. However, by dealing with the phases of growth separately, good correlation between the two methods was achieved. An important assumption in the method is that the final harvest biomass is a realistic reflection of the preceding growth, since the model method forces the estimates of growth to that point. In one germplasm line this assumption was not valid and the model-based method did not match the sampled biomass data.     

Young-of-the-year fish assemblages as an alternative to adult fish monitoring for ecological quality evaluation of running waters

Studies on the Upper Mississippi River, particularly over the last 15 years, have contributed to our understanding of trophic processes in large rivers. The framework established by earlier population-specific studies, however, cannot be overlooked. Examination of the feeding habits of fish ranging from planktivores to piscivores gave the first indication that trophic processes were influenced by the spatial complexity and annual hydrological patterns of river-floodplain ecosystems. Experimental studies, which have often been considered impossible or impractical in large rivers, demonstrated the potential for biotic controls of system dynamics through predator–prey and competitive interactions. Such studies have been particularly helpful in understanding the potential impact of non-native species, including zebra mussels and Asian carp, to biodiversity and secondary production. Our understanding of riverine ecosystem function expanded greatly as food web studies began the application of a new tool—natural stable isotopes. Studies employing stable isotopes illustrated how food webs in a number of large rivers throughout the world are supported by the autochthonous production of microalgae. This study, coupled with other studies testing the prevailing models of riverine ecosystem function, has brought us to a point of better understanding the nature of river ecosystem functions. It is through looking back at the earlier studies of fish diet that we should realize that the temporal and spatial complexities of river ecosystem function must still be addressed more fully. This and a better grasp of the significance of the arrangement of patches within the riverine landscape will prove beneficial, as we assess the appropriate scale of river rehabilitation with an eye on how rehabilitation promotes productivity within complex ecosystems, including the Upper Mississippi River.     

Accommodating dynamic oceanographic processes and pelagic biodiversity in marine conservation planning

Pelagic ecosystems support a significant and vital component of the ocean's productivity and biodiversity. They are also heavily exploited and, as a result, are the focus of numerous spatial planning initiatives. Over the past decade, there has been increasing enthusiasm for protected areas as a tool for pelagic conservation, however, few have been implemented. Here we demonstrate an approach to plan protected areas that address the physical and biological dynamics typical of the pelagic realm. Specifically, we provide an example of an approach to planning protected areas that integrates pelagic and benthic conservation in the southern Benguela and Agulhas Bank ecosystems off South Africa. Our aim was to represent species of importance to fisheries and species of conservation concern within protected areas. In addition to representation, we ensured that protected areas were designed to consider pelagic dynamics, characterized from time-series data on key oceanographic processes, together with data on the abundance of small pelagic fishes. We found that, to have the highest likelihood of reaching conservation targets, protected area selection should be based on time-specific data rather than data averaged across time. More generally, we argue that innovative methods are needed to conserve ephemeral and dynamic pelagic biodiversity.     

Operationalizing biodiversity for conservation planning

Biodiversity has acquired such a general meaning that people now find it difficult to pin down a precise sense for planning and policy-making aimed at biodiversity conservation. Because biodiversity is rooted in place, the task of conserving biodiversity should target places for conservation action; and because all places contain biodiversity, but not all places can be targeted for action, places have to be prioritized. What is needed for this is a measure of the extent to which biodiversity varies from place to place. We do not need a precise measure of biodiversity to prioritize places. Relative estimates of similarity or difference can be derived using partial measures, or what have come to be called biodiversity surrogates. Biodiversity surrogates are supposed to stand in for general biodiversity in planning applications. We distinguish between true surrogates, those that might truly stand in for general biodiversity, and estimator surrogates, which have true surrogates as their target variable. For example, species richness has traditionally been the estimator surrogate for the true surrogate, species diversity. But species richness does not capture the differences in composition between places; the essence of biodiversity. Another measure, called complementarity, explicitly captures the differences between places as we iterate the process of place prioritization, starting with an initial place. The relative concept of biodiversity built into the definition of complementarity has the level of precision needed to undertake conservation planning.     

Prioritizing species for conservation planning

The efforts to protect biological diversity must be prioritized because resources for nature conservation are limited. Conservation prioritization can be based on numerous criteria, from ecological integrity to species representation, but in this review I address only species-level prioritization. Criteria used for species prioritization range from aesthetical to evolutionary considerations, but I focus on the aspects that are biologically relevant. I distinguish between two main aspects of diversity that are used as objectives: Maintenance of biodiversity pattern, and maintenance of biodiversity process. I identify two additional criteria typically used in species prioritization that serve for achieving the objectives: The species’ need of protection, and cost and effectiveness of conservation actions. I discuss how these criteria could be combined with either of the objectives in a complementarity-based benefit function framework for conservation prioritization. But preserving evolutionary process versus current diversity pattern may turn out to be conflicting objectives that have to be traded-off with each other, if pursued simultaneously. Although many reasonable criteria and methods exist, species prioritization is hampered by uncertainties, most of which stem from the poor quality of data on what species exist, where they occur, and what are the costs and benefits of protecting them. Surrogate measures would be extremely useful but their performance is still largely unknown. Future challenges in species prioritization lie in finding ways to compensate for missing information.     

Quantifying the spatial ecology of wide-ranging marine species in the Gulf of California: implications for marine conservation planning

There is growing interest in systematic establishment of marine protected area (MPA) networks and representative conservation sites. This movement toward networks of no-take zones requires that reserves are deliberately and adequately spaced for connectivity. Here, we test the network functionality of an ecoregional assessment configuration of marine conservation areas by evaluating the habitat protection and connectivity offered to wide-ranging fauna in the Gulf of California (GOC, Mexico). We first use expert opinion to identify representative species of wide-ranging fauna of the GOC. These include leopard grouper, hammerhead sharks, California brown pelicans and green sea turtles. Analyzing habitat models with both structural and functional connectivity indexes, our results indicate that the configuration includes large proportions of biologically important habitat for the four species considered (25-40%), particularly, the best quality habitats (46-57%). Our results also show that connectivity levels offered by the conservation area design for these four species may be similar to connectivity levels offered by the entire Gulf of California, thus indicating that connectivity offered by the areas may resemble natural connectivity. The selected focal species comprise different life histories among marine or marine-related vertebrates and are associated with those habitats holding the most biodiversity values (i.e. coastal habitats); our results thus suggest that the proposed configuration may function as a network for connectivity and may adequately represent the marine megafauna in the GOC, including the potential connectivity among habitat patches. This work highlights the range of approaches that can be used to quantify habitat protection and connectivity for wide-ranging marine species in marine reserve networks.     

Importance of fish behaviour in modelling conservation problems: food limitation as an example

Simulation experiments using the inSTREAM individual-based brown trout Salmo trutta population model explored the role of individual adaptive behaviour in food limitation, as an example of how behaviour can affect managers' understanding of conservation problems. The model includes many natural complexities in habitat (spatial and temporal variation in characteristics such as depth and velocity, temperature, hiding and feeding cover, drift-food supply and predation risk), fish physiology (especially, how food intake and growth vary with hydrodynamics, cover, fish size and temperature) and behaviour. When drift-food concentration was increased over a wide range in 7 year simulations, the simulated population was always food limited. In fact, as food supply increased, the population increased at an increasing rate and consumed a higher percentage of the food supply, apparently because higher food concentrations make more stream area energetically profitable for drift feeders. The behaviour most responsible for this response was activity selection: when food was abundant, fish chose to feed less frequently and more nocturnally, thereby reducing predation mortality so more fish survived longer. These results indicate that the traditional concept of food limitation, that food availability stops limiting population size when it exceeds some threshold level, may not be useful and can be misleading. Results also strongly contradict the concept that a salmonid population is not food limited if the total food supply is greater than the population's consumption. Explicit consideration of adaptive behaviour produced a novel but believable understanding of food effects on salmonid populations. Published 2011. This article is a U.S. Government work and is in the public domain in the USA.     

Informational energy flow as an aspect of the ecological efficiency of marine ciliates

General systems optimization principles predict that informationally encoded energy might be scavenged by efficient consumers and might play an important role in ecosystem trophic dynamics. Model microcosms were set up to study the informational processing potential of two microherbivores from the same habitat. The experimental design enabled parallel measurements of both information and calorimetric transfers in the same systems. The two experimental animals, Uronema marinum and Euplotes vannus, were grown separately in synchronous culture and were fed non-limiting quantities of various food organisms of equal calorific value but potentially different informational content for the consumers in order to detect potentially different efficiencies of utilization. Information utilization was reflected by cell cycle advancement and changes in rate of growth. The synchronously growing ciliates were also switched from one food species to another to study induction time for informational processing.Uronema was the ecologically more efficient of the two species tested. When logarithmically growing and fed certain strains of chlorophytes, its ecological efficiency approached 20%, while on diets of other chlorophyte species it dropped to only 6%. Ecological efficiency for Euplotes on various diets ranged from 2–12%. Induction time lags were found when switching both animals from one diet to another.The data clearly show that nutritional quality factors (molecular information) is part of energy flow in at least some food webs since the reproduction of the ciliates studied was neither a strict function of feeding rate nor strictly coupled with the calorific values of the food organisms themselves. A theoretical construct was designed to quantitatively evaluate the informational gain in food-consumer relationships. The difference between the energetic cost of growth for the consumer on the diet most informationally impoverished and other foods was chosen as a base to which all other foods could be compared. The difference between the energetic cost of growth on the base food and other food species can therefore be expressed in terms of energy saved per food organism processed per consumer generation. A new unit of information gain in food web transformations, the Cyberon, can be translated to other energy units through fundamental respiration relations. The theoretical energetic implications for resource distribution and utilization at the nanno, micro and meio levels of marine communities are discussed.     

14C-methylamine-glutaraldehyde conjugation as an alternative to iodination for protein labeling

Radiolabeling of native proteins conventionally has required iodination using 125Iodine (125I). Although radioiodination can result in high specific activity, there are several drawbacks in the use of 125I (e.g., radiological hazards and short half-life). 14C-Methylamine-glutaraldehyde conjugation to proteins offers an alternative for radiolabeling of proteins that is safer and longer-lived alpha-2-Macroglobulin was radiolabeled by conjugation to a 14C-methylamine-glutaraldehyde conjugate. Analysis of the labeling procedure was performed using scintillation counting, gel filtration chromatography, and protein assays. The radiolabeled alpha-2-macroglobulin was activated using established protocols and tested for functional integrity using competitive binding assays in the presence of recombinant receptor associated protein, an alternative ligand for the alpha-2-macroglobulin cellular receptor. The function of alpha-2-macroglobulin was unaffected by the labeling procedure. Comparison of 14C-methylamine-labeling and iodination by Scatchard analysis yielded nonlinear plots that suggested the presence of two sets of receptors with different binding affinities but that do not show cooperativity. This technique offers an alternative to radioiodination for the sensitive labeling of proteins.     

Immunomagnetic separation as an alternative to enrichment broths for Salmonella detection

One hundred and twenty foodstuffs were tested for the enrichment of Salmonella species by immunoseparation. The foodstuffs covered six groups: raw chicken, prawns, skimmed milk powder, herbs and spices, cocoa powder and animal feed. Half of the food samples were spiked with one Salmonella species: Salm. ealing, Salm. enteritidis, Salm. give, Salm. typhimurium or Salm. virchow . Comparison of Salmonella recovery with standard methods (selenite cystine broth, tetrathionate broth and Rappaport-Vassiliadis broth) was carried out. Immunoseparation gave similar numbers of true positives to the standard enrichment methods in a short time period. Only immunoseparation isolated Salmonella species from spiked garlic granules demonstrating the possible recovery of sublethally injured cells.     

Comparison of marine spatial planning methods in Madagascar demonstrates value of alternative approaches

The Government of Madagascar plans to increase marine protected area coverage by over one million hectares. To assist this process, we compare four methods for marine spatial planning of Madagascar's west coast. Input data for each method was drawn from the same variables: fishing pressure, exposure to climate change, and biodiversity (habitats, species distributions, biological richness, and biodiversity value). The first method compares visual color classifications of primary variables, the second uses binary combinations of these variables to produce a categorical classification of management actions, the third is a target-based optimization using Marxan, and the fourth is conservation ranking with Zonation. We present results from each method, and compare the latter three approaches for spatial coverage, biodiversity representation, fishing cost and persistence probability. All results included large areas in the north, central, and southern parts of western Madagascar. Achieving 30% representation targets with Marxan required twice the fish catch loss than the categorical method. The categorical classification and Zonation do not consider targets for conservation features. However, when we reduced Marxan targets to 16.3%, matching the representation level of the "strict protection" class of the categorical result, the methods show similar catch losses. The management category portfolio has complete coverage, and presents several management recommendations including strict protection. Zonation produces rapid conservation rankings across large, diverse datasets. Marxan is useful for identifying strict protected areas that meet representation targets, and minimize exposure probabilities for conservation features at low economic cost. We show that methods based on Zonation and a simple combination of variables can produce results comparable to Marxan for species representation and catch losses, demonstrating the value of comparing alternative approaches during initial stages of the planning process. Choosing an appropriate approach ultimately depends on scientific and political factors including representation targets, likelihood of adoption, and persistence goals.     

From bobolinks to bears: interjecting geographical history into ecological studies, environmental interpretation, and conservation planning

In these days of supercomputer‐based global climate models, large ecosystem experiments including Biosphere II, and aircraft‐borne sensors of ozone holes it is often overlooked that many fundamental insights into ecological processes and major environmental issues come not through reductionist or high‐tech studies of modern conditions but from thoughtful consideration of nature’s history. In fact, it is foolhardy to make any ecological interpretation of modern landscapes or environments or to formulate policy in conservation or natural resource management without an historical context that extends back decades, at least, but preferably centuries or millennia. Oftentimes, the ecological and conservation communities, in their search for more detail on the present and simulation of the future, appear to have forgotten the value of a deep historical perspective in research and application. However, the willingness of the geographical sciences to embrace broad temporal and spatial perspectives and to consider cultural as well as natural processes is worth emulating as we address environmental subjects in the new millennium.     

系统保护规划和不可代替性分析在区域规划中的应用

在区域规划中应该把保护和发展密切结合起来,才能为实施可持续发展战略奠定基础。遵循系统保护规划和不可代替性分析的观点,内蒙古克 什克腾旗应该建立10个不同类型的保护区,并与有关部门和社区实施共同管理,建设成为一个可持续发展的示范基地。     

Wind as an ecological factor

Wind has long been regarded as an important ecological factor in forests owing to the dramatic damage hurricanes can wreak. However, the long-term wind regime of a site also exerts a strong influence on the growth of trees. A relatively large amount is known about the acclimation of trees to wind but less about intra- or interspecific adaption to high winds. In fact, changes resulting from the effect of wind may have a greater effect on the ecology of forests than the more acute effects of destructive stroms. Improved understanding of the mechanical effects of wind is helping foresters manage their plantations and may help us to account better for local and geographical variations in forest ecology.