Multi-scale turtle dove nest habitat selection in a Mediterranean agroforestry landscape: implications for the conservation of a vulnerable species

Determination of factors affecting nest habitat selection is a major topic in avian ecology, with strong implications for conservation purposes especially for the species with unfavorable status. The turtle dove (Streptopelia turtur) is a vulnerable species that has undergone a rapid and serious decline across its distribution range. I investigated the effect of different variables at two spatial scales (10-m radius, nest site; and 100-m radius, landscape) on the probability of presence of turtle dove nests in an agroforestry system of Central Morocco. Topography, habitat structure, human disturbance, and land use parameters were measured at nests (n?=?70) and random points (n?=?70) at both scales. Generalized linear model analyses showed that, at the nest site scale, tree height best explained occurrence of turtle dove nests (with nest occurring preferentially in smaller trees). At the landscape scale, nest occurrence probability decreased with elevation and distance to the nearest forest edge, and increased with forest cover and distance to the nearest habitation. Comparison of explanatory power of the single-scale models showed that the most relevant scale was the nest site level, followed by landscape scales, but the model including both nest-scale and landscape-scale variables was best. The variation partitioning analysis confirmed this pattern. In study area, the turtle dove nest habitat selection process occurs within a relatively small scale, but the joint effect of variables at the two scales is relevant. From a practical perspective, it would be interesting to reproduce the same experimental approach on other Mediterranean breeding habitats (agricultural and other forest habitats) to find out if this species would adopt the same nest habitat selection pattern.     

Mapping the habitat suitability of Ottelia species in Africa

Understanding the influence of environmental covariates on plant distribution is critical, especially for aquatic plant species. Climate change is likely to alter the distribution of aquatic species. However, knowledge of this change on the burden of aquatic macroorganisms is often fraught with difficulty. Ottelia, a model genus for studying the evolution of the aquatic family Hydrocharitaceae, is mainly distributed in slow-flowing creeks, rivers, or lakes throughout pantropical regions in the world. Due to recent rapid climate changes, natural Ottelia populations have declined significantly. By modeling the effects of climate change on the distribution of Ottelia species and assessing the degree of niche similarity, we sought to identify high suitability regions and help formulate conservation strategies. The models use known background points to determine how environmental covariates vary spatially and produce continental maps of the distribution of the Ottelia species in Africa. Additionally, we estimated the possible influences of the optimistic and extreme pessimistic representative concentration pathways scenarios RCP 4.5 and RCP 8.5 for the 2050s. Our results show that the distinct distribution patterns of studied Ottelia species were influenced by topography (elevation) and climate (e.g., mean temperature of driest quarter, annual precipitation, and precipitation of the driest month). While there is a lack of accord in defining the limiting factors for the distribution of Ottelia species, it is clear that water-temperature conditions have promising effects when kept within optimal ranges. We also note that climate change will impact Ottelia by accelerating fragmentation and habitat loss. The assessment of niche overlap revealed that Ottelia cylindrica and O. verdickii had slightly more similar niches than the other Ottelia species. The present findings identify the need to enhance conservation efforts to safeguard natural Ottelia populations and provide a theoretical basis for the distribution of various Ottelia species in Africa.     

High dispersal in a frog species suggests that it is vulnerable to habitat fragmentation

Global losses of amphibian populations are a major conservation concern and their causes have generated substantial debate. Habitat fragmentation is considered one important cause of amphibian decline. However, if fragmentation is to be invoked as a mechanism of amphibian decline, it must first be established that dispersal is prevalent among contiguous amphibian populations using formal movement estimators. In contrast, if dispersal is naturally low in amphibians, fragmentation can be disregarded as a cause of amphibian declines and conservation efforts can be focused elsewhere. We examined dispersal rates in Columbia spotted frogs (Rana luteiventris) using capture-recapture analysis of over 10,000 frogs in combination with genetic analysis of microsatellite loci in replicate basins. We found that frogs had exceptionally high juvenile dispersal rates (up to 62% annually) over long distances (>5km), large elevation gains (>750m) and steep inclines (36 degrees incline over 2km) that were corroborated by genetic data showing high gene flow. These findings show that dispersal is an important life-history feature of some amphibians and suggest that habitat fragmentation is a serious threat to amphibian persistence.     

Determinants for the conservation of a vulnerable fire-dependent species at its marginal range

We investigated the role of fire and other potential biotic and abiotic determinants for the occurrence of an obligate seeder and active pyrophyte, Cistus salviifolius, a vulnerable species in the Swiss Red List. Populations of this species are threatened by the change of fire regime that has occurred during the last ten years. Fires and burnt areas are today less frequent and it is not clear whether other factors can compensate for such fire-free periods should this trend continue. We used a stratified random design to collect data on the cover of three growth stages, i.e., juvenile, chamaephytic and nanophanerophytic (oldest), of C. salviifolius, on plant communities, and on environmental factors. A tree-based discriminant analysis showed that the time elapsed since last fire was the best predictor of Cistus occurrence, but plants could survive on rocky and sunny sites if no fire had occurred for more than 32 years. Contrary to our expectations, the number of fires and time elapsed since the last event was correlated with the oldest stages only, and not with that of seedlings or juveniles. Rank correlations showed that bare soil was a good predictor of young stages, whereas rocky outcrops and shallow soils were important for the chamaephytic stage. Our results confirm the role of disturbances and competition-free habitats as determinants of the survival of this vulnerable pyrophyte during long periods without fires and the existence of ontogenetic niche segregation of this species. In order to maintain viable C. salviifolius populations in the Alps, managers should undertake conservation actions according to the requirements of the different growth stages of this species.     

Lichen translocation with reference to species conservation and habitat restoration

Lichen translocation techniques that may be of value in the salvage of endangered lichen species, or in the latter stages of habitat restoration, are reviewed. Successful translocation is defined here as the transfer of a target organism from a donor site to a receptor site to establish a new self-maintaining colony; for lichens, this may or may not include co-transfer of the thallus-supporting substrate. In a time of global environmental change many species are under threat and the need for effective translocation methods is clear. Indeed, some lichens are already amenable to translocation from one substrate to another. Global conservation requires the restoration of degraded ecosystems and translocation technology offers a tool for habitat replenishment. The re-introduction of lichenised fungi into sites from which they have been lost is an integral part of the restoration of complex habitats. Successful translocation creates in turn niches for other organisms which inhabit, or feed upon, them.     

A habitat suitability analysis at multi-spatial scale of two sympatric flying fox species reveals the urgent need for conservation action

In this study we used a multi-spatial scale approach to investigate habitat suitability, roosting characteristics, and ecological niche in two flying fox species on the Comoros Islands—Pteropus livingstonii and Pteropus seychellensis comorensis. At a broad scale, we assessed the ecological niche and habitat suitability for both species using the Species Distribution Modeling method based on the recent ensembles of small models (ESM) approach. At a fine scale, Ecological Niche Factor Analysis (ENFA) was applied to assess habitat selection by each species. Direct observation was used at each roost to estimate the total number of individuals and to identify the roost characteristics. At both broad and fine scales, the analyses highlighted clear niche partitioning by the two species. We found that P. livingstonii has a very limited distribution, restricted to steep, high-elevation slopes of the islands’ remaining natural forests, and the patterns were the same for roosting, foraging sites and the entire habitat. By contrast, P. s. comorensis has a relatively large geographic range that extends over low-elevation farmlands and villages and it was negatively correlated to natural forest across the entire area and all roosting sites, but its foraging areas were positively correlated to natural forest and high elevation areas. Both species selected large, tall trees for roosting. The total number of individuals in the studied area was estimated to be 1243 P. livingstonii and 11,898 P. s. comorensis. The results of our study demonstrated that these two species use different habitat types and ensure different ecosystem services in pollination and seed dispersion and thus are both critical for maintaining overall ecosystem dynamics. However, the currently high level of hunting pressure and roost disturbance makes them vulnerable to extinction. To ensure the viability of both species, conservation measures need to be taken by the Comoros government.     

Habitat suitability modelling to improve conservation status of two critically endangered endemic Afromontane forest bird species in Taita Hills,Kenya

Tropical montane forests are known to support many endemic species with restricted geographic ranges. Many of these species are however, faced with numerous threats, most notably from habitat loss and degradation, invasive alien species, and climate change. Examples include Taita Apalis and Taita Thrush. Taita Apalis (Apalis fuscigularis) and Taita Thrush (Turdus helleri) are species of birds listed as Critically Endangered by the Government of Kenya and the International Union for Conservation of Nature (IUCN). They are endemic to Taita Hills’ cloud forests in southeastern Kenya and protected under Wildlife Conservation and Management Act. As they face high risk of extinction, exploring their habitat suitability is imperative for their protection. To determine the current spatial distribution and the key ecogeographical explanatory factors and conditions affecting species distribution and indirect effects on species survival and reproduction, we employed Maximum Entropy (MaxEnt) modelling. This study was conducted in Ngangao and Vuria forests in June and July 2019 and 2020. Ngangao forest is gazetted as forest reserve and managed by the Kenya Forest Service whereas Vuria is non-gazetted and thus remains without official protection status. Ecogeographical explanatory variables; climatic, remote sensing-, LIDAR-, topography- and landscape-based variables were used in modelling and separate models were produced. 23 occurrence records of Taita Apalis and 30 of Taita Thrush from Ngangao and 21 of Taita Apalis from Vuria forests were used in the modelling. According to the models, less than 7% of the total area of Ngangao and Vuria forests was predicted as suitable habitat for Taita Apalis and Taita Thrush. This shows that these two species are more vulnerable to extinction from demographic stochasticity. Consequently, managing their habitats is critical for their long-term persistence. LIDAR-based canopy height range and elevation greatly influenced Taita Apalis distribution in Ngangao forest, with areas of high elevation (1620–1750 m a.s.l.) and having open middle-storey preferred. Elevation, slope and topographic wetness index (twi) were the major determinants of Taita Thrush distribution in Ngangao, where gentle sloping areas with moderately dry surfaces within high elevation (1620–1730 m a.s.l.) were favoured. Mean annual temperature, Euclidean distance to the forest edge, slope and land cover type greatly influenced the distribution of Taita Apalis in Vuria, with gentle sloping areas within forest interior made up of indigenous vegetation preferred. This study proposes reforesting open and degraded sites next to areas predicted as highly suitable for the two species; establishment of agroforestry belts based on indigenous trees on the boundaries of the two forests to reduce grazing and firewood collection pressure and enhance resilience to the edge effects; and enhancing forest protection through Participatory Forest Management.     

Modeling habitat suitability and spread dynamics of two invasive rose species in protected areas of Mendoza,Argentina

Biological invasions are a main threat to biodiversity and natural resources, which calls for studies that identify the regions that present the greatest invasion risks. We assessed the potential distribution of two non-native rose species, Rosa canina and Rosa rubiginosa, in mountain environments in mid-western Argentina, using species distribution models and dynamic simulations. We first fitted the model for one protected area, Villavicencio Nature Reserve, and then we made predictions on the distribution of these species for other protected areas in the same region, where the presence of these species was observed but where there are no systematic surveys on their distribution. We also modeled the invasion dynamics of these species based on habitat suitability, considering the dispersal distance and the growth rate of the invaded area. High and very high suitability sites were detected in all the protected areas studied, suggesting high invasion risk in these protected areas. Our simulations of the spatio–temporal dynamics of the rose invasion in Villavicencio indicated that the spread depends strongly on the average seed dispersal distance, that the spread has been gradual since the rose introduction into the protected area, and that 150 years after the introduction even the areas identified as having low suitability are expected to have been invaded. This is the first study of this type for the region, where these invasive rose species are a serious problem. Taken together, our results may be useful to identify areas vulnerable to invasion and thus help generate effective preventive, monitoring, and control practices.     

Principles for linking fish habitat to fisheries management and conservation

A set of eight simple ecological and social principles is proposed that could enhance the understanding of what constitutes fish 'habitat' and, if implemented, could contribute to improved management and conservation strategies. The habitat principles are a small, interrelated sub‐set that may be coupled with additional ones to formulate comprehensive guidelines for management and conservation strategies. It is proposed that: 1) habitat can be created by keystone species and interactions among species; 2) the productivity of aquatic and riparian habitat is interlinked by reciprocal exchanges of material; 3) the riparian zone is fish habitat; 4) fishless headwater streams are inseparable from fish‐bearing rivers downstream; 5) habitats can be coupled – in rivers, lakes, estuaries and oceans, and in time; 6) habitats change over hours to centuries; 7) fish production is dynamic due to biocomplexity, in species and in habitats; 8) management and conservation strategies must evolve in response to present conditions, but especially to the anticipated future. It is contended that the long‐term resilience of native fish communities in catchments shared by humans depends on incorporating these principles into management and conservation strategies. Further, traditional strategies poorly reflect the dynamic nature of habitat, the true extent of habitat, or the intrinsic complexity in societal perspectives. Forward‐thinking fish management and conservation plans view habitat as more than water. They are multilayered, ranging from pools to catchments to ecoregions, and from hours to seasons to centuries. They embrace, as a fundamental premise, that habitat evolves through both natural and anthropogenic processes, and that patterns of change may be as important as other habitat attributes.     

Enrichment planting to improve habitat quality and conservation value of tropical rainforest fragments

Many areas of tropical rainforest have been fragmented and the habitat quality of fragments is often poor. For example, on Borneo, many forest fragments are highly degraded by repeated logging of Dipterocarpaceae trees prior to fragmentation, and we examined the viability of enrichment planting as a potential management tool to enhance the conservation value of these forest fragments. We planted seedlings of three dipterocarp species with contrasting light demands and tolerances (Parashorea malaanonan (light demander), Dryobalanops lanceolata (intermediate), Hopea nervosa (shade tolerant)) in eight forest fragment sites (3–3529 ha), and compared seedling performance with four sites in continuous forest. Eighteen months after planting, survival rates of seedlings were equally high in fragment sites (mean survival = 63 %), and in continuous forest sites (mean survival = 68 %). By contrast, seedling growth and herbivory rates were considerably higher in fragments (by 60 % for growth and 45 % for herbivory) associated with higher light environments in degraded forest fragments compared with continuous forest sites. Among the three study species, H. nervosa seedlings had the highest survival rates overall, and P. malaanonan seedlings generally grew fastest and suffered highest herbivory rates. There were no interactions between species performance and the effects of fragment site area, forest structure or soil characteristics of sites suggesting that the three species responded similarly to fragmentation effects. High survival of planted seedlings implies that enrichment planting would be a successful forest management strategy to improve forest quality, and hence conservation value, of fragments.     

Mediterranean Temporary Lagoon: Proposal for a definition of this endangered habitat to improve its conservation

Coastal lagoons have been recognised as a priority habitat for conservation and have benefited from several conservation plans. Under the Mediterranean climate, some of these lagoons might dry out during summer due to drought events. We propose the term Mediterranean Temporary Lagoons (MTLs) for these ephemeral water bodies and discuss their definition and characteristics. This term emerged in France among its coastal zone managers, who now commonly use it for conservation purposes. It is used in both natural systems as well as most artificial salt ponds in abandoned saltworks.In Europe, two directives have integrated lagoons as key targets to be preserved. Nonetheless, a certain discrepancy in the different definitions of lagoons has constrained joint actions. Indeed, while institutional definitions were originally derived from the scientific concept, their legislative and managerials meanings have been gradually modified and nowadays often differ from the original concept to create difficulties in the field. In addition, while it has been recommended to consider MTLs as a coastal lagoon habitat in the European Habitat Directive, its interpretation among EU member states is unsettled. Thus, clarifying lagoon habitats' terminology is required to ensure better management, monitoring and planning, and coordinate conservation actions.We discuss the inclusion of MTLs in habitat 1150 by confronting scientific and institutional literature and propose a new framework to better delimitate lagoon habitat around the Mediterranean basin, integrating MTLs. MTLs represent a specific habitat that hosts a pool of stenoecious macrophytes of conservation interest like Althenia filiformis, Riella helicophylla or Tolypella salina.     

Identifying indicator plant species of habitat quality and invasibility as a guide for peri-urban forest management

A floristic survey has been carried out in a peri-urban forest, the Sonian Forest in Brussels, to identify indicator plant species in the herbaceous layer, which could be used as an aid within the framework of a more sustainable management of the forest. Three hundred and seventy two (372) taxa have been identified, 33 of which are non-native (i.e. non-indigenous species regarding the study area, whether invasive or not). Criteria of habitat quality that have been chosen are the species richness, the commonness of the habitat, based on constitutive species, and its invasibility (vulnerability for invasion). On the basis of a comparison of the value of these criteria when each considered (potential indicator) species is present or not, 17 species have been recognised as reliable indicators of at least one of these three criteria. In particular, vegetation types containing either Anthriscus sylvestris, Galeopsis tetrahit or Senecio ovatus were found to be more susceptible to invasion than other habitats. The way to how the predictability of invasions might be effectively used as a management tool is discussed. Furthermore, we found a positive significant correlation (Bonferroni corrected probabilities) between the species richness and luminosity factor (derived from Ellenberg's indices), and the proportion of grassland and wetland species. The species richness was significantly negatively correlated with the proportion of woodland species. An increase in commonness was significantly correlated with a decrease in the proportion of geophytes. The usefulness of these results as an ecological basis for forest management is discussed.     

Combining scales in habitat models to improve conservation planning in an endangered vulture

Predictive modelling of species’ distributions has been successfully applied in conservation ecology, but effective conservation requires predictive and accurate models. The combination of different scales to build habitat models might improve their predictive ability and hence their usefulness for conservation, but this approach has rarely been evaluated. We developed habitat-occupancy models combining scales from nest-site to landscape for a key population at the northwestern edge of the distribution of the globally endangered Egyptian vulture (Neophron percnopterus). We used generalised linear models (GLM) and an information-theoretic approach to identify the best combination of scales and resolutions for explaining occurrence. Those models that combined nest-site and landscape scales improved the predictive ability compared with the scale-specific ones. The best combined model had a very high predictive ability when used against an independent dataset (92% correct classifications). Egyptian vultures preferred to nest in caves with vegetation at the entrance that were situated at the base of long cliffs, provided that these cliffs are embedded within low-lying, heterogeneous areas with little topographic irregularity and with little human disturbance. The density of sheep around the nest positively influenced Egyptian vulture presence. Conservation of the studied population should focus on minimising human disturbance and on promoting sustainable development through conservation of traditional pastoralism. Our findings highlight the importance of developing region-specific multiscale models in order to design effective conservation strategies. The approach described here may be applied similarly in other populations and species.     

Ecological dynamics of extinct species in empty habitat networks. 2. The role of host plant dynamics

This paper explores the relative effects of host plant dynamics and butterfly-related parameters on butterfly persistence. It considers an empty habitat network where a rare butterfly ( Cupido minimus ) became extinct in 1939 in part of its historical range in north Wales, UK. Surviving populations of the butterfly in southern Britain were visited to assess use of its host plant ( Anthyllis vulneraria ) in order to calibrate habitat suitability and carrying capacity in the empty network in north Wales. These data were used to deduce that only a portion (∼19%) of the host plant network from north Wales was likely to be highly suitable for oviposition. Nonetheless, roughly 65,460 eggs (3273 adult equivalents) could be expected to be laid in north Wales, were the empty network to be populated at the same levels as observed on comparable plants in surviving populations elsewhere. Simulated metapopulations of C. minimus in the empty network revealed that time to extinction and patch occupancy were significantly influenced by carrying capacity, butterfly mean dispersal distance and environmental stochasticity, although for most reasonable parameter values, the model system persisted. Simulation outputs differed greatly when host plant dynamics was incorporated into the modelled butterfly dynamics. Cupido minimus usually went extinct when host plant were at low densities. In these simulations host plant dynamics appeared to be the most important determinant of the butterfly's regional extirpation. Modelling the outcome of a reintroduction programme to C. minimus variation at high quality locations, revealed that 65% of systems survived at least 100 years. Given the current amount of resources of the north Wales landscape, the persistence of C. minimus under a realistic reintroduction programme has a good chance of being successful, if carried out in conjunction with a host plant management programme.     

Modelling invasion for a habitat generalist and a specialist plant species

Predicting suitable habitat and the potential distribution of invasive species is a high priority for resource managers and systems ecologists. Most models are designed to identify habitat characteristics that define the ecological niche of a species with little consideration to individual species' traits. We tested five commonly used modelling methods on two invasive plant species, the habitat generalist Bromus tectorum and habitat specialist Tamarix chinensis , to compare model performances, evaluate predictability, and relate results to distribution traits associated with each species. Most of the tested models performed similarly for each species; however, the generalist species proved to be more difficult to predict than the specialist species. The highest area under the receiver-operating characteristic curve values with independent validation data sets of B. tectorum and T. chinensis was 0.503 and 0.885, respectively. Similarly, a confusion matrix for B. tectorum had the highest overall accuracy of 55%, while the overall accuracy for T. chinensis was 85%. Models for the generalist species had varying performances, poor evaluations, and inconsistent results. This may be a result of a generalist's capability to persist in a wide range of environmental conditions that are not easily defined by the data, independent variables or model design. Models for the specialist species had consistently strong performances, high evaluations, and similar results among different model applications. This is likely a consequence of the specialist's requirement for explicit environmental resources and ecological barriers that are easily defined by predictive models. Although defining new invaders as generalist or specialist species can be challenging, model performances and evaluations may provide valuable information on a species' potential invasiveness.