Interannual variation in rainfall,drought stress and seedling mortality may mediate monodominance in tropical flooded forests

Flood tolerance is commonly regarded as the main factor explaining low diversity and monodominance in tropical swamps. In this study we examined seedling mortality in relation to seasonality, i.e., flooding versus drought, of the dominant tree species (Prioria copaifera), and three associated species (Pterocarpus officinalis, Carapa guianensis and Pentaclethra macroloba), in seasonally flooded forests (SFF) in Darien, Panama. Seedling mortality differed among species, years and seasons. Prioria seedlings experienced the lowest overall mortality, and after 3 years many more Prioria seedlings remained alive than those of any of the associated species. In general, within species, larger seedlings had greater survival. Seed size, which can vary by close to 2 orders of magnitude in Prioria, had a confounding effect with that of topography. Large-seeded Prioria seedlings experienced 1.5 times greater mortality than small-seeded seedlings, as large-seeded Prioria seedlings were more likely to be located in depressions. This finding suggests that seed size, plant size and topography are important in understanding SFF regeneration. For all species, seedling mortality was consistently greater during the dry season than during flooding. For Prioria, dry season seedling mortality was correlated with drought stress, that is, high mortality during the long El Niño dry season of 1998 and the normal dry season of 2000, but very low dry season mortality during the mild dry season of 1999. Prioria’s ability to dominate in seasonally flooded forest of Central America is partly explained by its low drought-related mortality in comparison to associated species.     

Photosynthesis and growth adaptation of Pterocarya stenoptera and Pinus elliottii seedlings to submergence and drought

To uncover adaptation capacities of two flooding-tolerant plant species, Pterocarya stenoptera (a native species) and Pinus elliottii (an exotic species from southeastern USA), to alternating submergence and drought, we investigated their physiological and growth responses to water stress. Water treatments, including control, continuous flooding (CF), and periodic flooding and drought (PF), were applied to seedlings in order to simulate water level fluctuation in the hydrofluctuation zone of the Three Gorges Reservoir Region. Results showed that net photosynthetic rate (P_N), stomatal conductance, and intrinsic water-use efficiency of both plant species were negatively affected under CF and PF compared with the corresponding controls. The P_N of both species under PF was comparable to that under CF. At the end of the experiment, the ratio of intercellular to ambient CO₂ concentration was not statistically different between water treatments, while that of P. elliottii was significantly higher than that of P. stenoptera. Although P. stenoptera formed lenticels under flooding conditions, P. elliottii seedlings allocated more mass to leaves and increased the relative growth rate of height to enhance the photosynthetic efficiency. Our results illustrated that P. stenoptera and P. elliottii seedlings developed different adaptive strategies in response to flooding, both CF and PF. Therefore, both P. stenoptera and P. elliottii are promising candidates for the vegetation reconstruction of the riparian zones in the Three Gorges Reservoir Region.     

Sexual reproduction of clonal dwarf shrubs in a forest–tundra ecotone

Successful sexual reproduction may be more important for regeneration of clonal species in high-latitude and -altitude areas than has been previously suggested. We investigated the potential of Vaccinium myrtillus, V. vitis-idaea and Empetrum nigrum ssp. hermaphroditum (E. hermaphroditum) for sexual reproduction at three sites in the forest–tundra ecotone in Finnish Lapland. We studied whether the potential differs between plant communities, whether disturbance enhances germination, and whether seedling emergence is limited by seed availability. We established a field experiment with disturbance and sowing treatments, and monitored seed and seedling numbers and survival rates for two years. The number of mature seeds of V. myrtillus was higher in plants from the tundra heath than in those from the coniferous and mountain birch forests. The number of mature seeds and seedlings emerging from the seed bank of E. hermaphroditum tended also to be higher in the tundra heath. Disturbance marginally increased the seedling emergence of V. myrtillus and E. hermaphroditum, whereas sowing generally increased the seedling numbers. The seedling number of V. myrtillus was lower in the tundra heath and that of E. hermaphroditum was lower in the coniferous forest than at the other sites. Seedling survival was equal for all plant species at all sites. We conclude that the capacity for sexual reproduction varies among plant communities, and seed availability is a stronger constraint than microsite availability for the studied species. Once the crucial early phase of seedling establishment is overcome, seedling survival enables successful recruitment of V. myrtillus, V. vitis-idaea and E. hermaphroditum in the subarctic area.     

Does a foliar endophyte improve plant fitness under flooding?

Although endophytic fungi are ubiquitous in plants, their full range of ecological effects has yet to be characterized, particularly in non-agronomic systems. In this study, we compared the responses of two congeneric bluegrass species to flooding. Both plant species co-occur in subalpine zones of the Rocky Mountains. Marsh bluegrass (Poa leptocoma) commonly hosts a vertically transmitted fungal endophyte (Epichloë sp.) and naturally grows in wetter conditions than does nodding bluegrass (Poa reflexa), which lacks an epichloid endophyte. We investigated the novel hypothesis that endophyte symbiosis promotes host fitness under flooded conditions, contributing to niche differentiation between the two bluegrass species. We used a factorial greenhouse experiment to test whether endophyte presence improved survival, growth, or reproduction of P. leptocoma under flooded versus non-flooded edaphic conditions by experimentally removing the endophyte from half of the plants. We compared P. leptocoma responses to those of the endophyte-free congener. In contrast to expectations generated from the natural distributions of the two plant species, endophyte presence was more beneficial to P. leptocoma under ambient soil moisture than under flooding. Increased benefits of symbiosis in drier soils are consistent with studies of other grass endophytes. Flooded soils also unexpectedly improved the growth of P. reflexa more than that of the wet habitat specialist, P. leptocoma. While our results demonstrate an overall benefit of fungal symbiosis in this system, ecological factors other than flooding per se likely underlie the observed geographical distributions of these congeneric grasses in nature.     

Flooding events and rising water temperatures increase the significance of the reed pathogen <Emphasis Type="Italic">Pythium phragmitis</Emphasis> as a contributing factor in the decline of <Emphasis Type="Italic">Phragmites australis</Emphasis>

Pythium species are economically significant soilborne plant pathogens with worldwide distribution, causing seedling damping-off or root rot diseases. Pythium phragmitis is a newly described pathogen of common reed (Phragmites australis), widespread in the reed-belt of Lake Constance, Germany. It is highly aggressive towards reed leaves and seedlings, but obviously does not affect roots. In the context of ‘reed decline’ phenomena, P. phragmitis infection of reed inundated during flooding events may be of particular significance. We could show that flooding itself is not necessarily detrimental for reed plants. In the presence of the pathogen, however, most submerged leaves and plants were killed within several weeks. Clipped plants did not show regrowth in the Pythium infested treatments. Significant losses in assimilating leaf area of reeds could, thus, be the result of Pythium infection rather than of flooding alone. Therefore, we suggest that the combination of extended flooding and the presence of P. phragmitis might considerably contribute to ‘reed decline’ at Lake Constance. In parallel, we could show that pathogenicity and spread of this species are considerably favoured by rising temperatures. Since an increase in average water temperature has been found for Lake Constance, we propose that P. phragmitis could be an important factor in the dieback of reed stands likely to be promoted by predicted climate change phenomena.     

<Emphasis Type="Italic">Trichoderma</Emphasis> Modulates Stomatal Aperture and Leaf Transpiration Through an Abscisic Acid-Dependent Mechanism in <Emphasis Type="Italic">Arabidopsis</Emphasis>

Trichoderma species are widespread phytostimulant fungi that act through biocontrol of root pathogens, modulation of root architecture, and improving plant adaptation to biotic and abiotic stress. With the major challenge to better understand the contribution of Trichoderma symbionts to plant adaptation to climate changes and confer stress tolerance, we investigated the potential of Trichoderma virens and Trichoderma atroviride in modulating stomatal aperture and plant transpiration. Arabidopsis wild-type (WT) seedlings and ABA-insensitive mutants, abi1-1 and abi2-1, were co-cultivated with either T. virens or T. atroviride, and stomatal aperture and water loss were determined in leaves. Arabidopsis WT seedlings inoculated with these fungal species showed both decreased stomatal aperture and reduced water loss when compared with uninoculated seedlings. This effect was absent in abi1-1 and abi2-1 mutants. T. virens and T. atroviride induced the abscisic acid (ABA) inducible marker abi4:uidA and produced ABA under standard or saline growth conditions. These results show a novel facet of Trichoderma-produced metabolites in stomatic aperture and water-use efficiency of plants.     

Drastic anthocyanin increase in response to <Emphasis Type="Italic">PAP1</Emphasis> overexpression in <Emphasis Type="Italic">fls1</Emphasis> knockout mutant confers enhanced osmotic stress tolerance in <Emphasis Type="Italic">Arabidopsis thaliana</Emphasis>

Key message

pap1 - D/fls1ko double mutant plants that produce substantial amounts of anthocyanin show tolerance to abiotic stress.

Abstract

Anthocyanins are flavonoids that are abundant in various plants and have beneficial effects on both plants and humans. Many genes in flavonoid biosynthetic pathways have been identified, including those in the MYB-bHLH-WD40 (MBW) complex. The MYB gene Production of Anthocyanin Pigment 1 (PAP1) plays a particularly important role in anthocyanin accumulation. PAP1 expression in many plant systems strongly increases anthocyanin levels, resulting in a dark purple color in many plant organs. In this study, we generated double mutant plants that harbor fls1ko in the pap1-D background (i.e., pap1-D/fls1ko plants), to examine whether anthocyanins can be further enhanced by blocking flavonol biosynthesis under PAP1 overexpression. We also wanted to examine whether the increased anthocyanin levels contribute to defense against osmotic stresses. The pap1-D/fls1ko mutants accumulated higher anthocyanin levels than pap1-D plants in both control and sucrose-treated conditions. However, flavonoid biosynthesis genes were slightly down-regulated in the pap1-D/fls1ko seedlings as compared to their expression in pap1-D seedlings. We also report the performance of pap1-D/fls1ko seedlings in response to plant osmotic stresses.

     

Morphological and molecular taxonomy of novel species <Emphasis Type="Italic">Pleurotheciaceae</Emphasis> from freshwater habitats in Yunnan,China

The diversity of lignicolous freshwater fungi of the Greater Mekong Subregion are currently being studied. In this paper, 18 fresh collections of Pleurotheciaceae from submerged wood in freshwater are characterized based on morphological characters and analyses of ITS, LSU, SSU and RPB2 sequence data. Six new species of Pleurotheciella (P. aquatica, P. fusiformis, P. guttulata, P. lunata, P. saprophytica, P. submersa), one new Phaeoisaria species (Ph. aquatica) and one new Pleurothecium species (Pl. aquaticum) are introduced based on their distinct morphology and evidence from molecular phylogeny. Pleurotheciella uniseptata, Phaeoisaria clematidis and Pleurothecium pulneyense are also redescribed and phylogenetic relationships assessed herein, these species are the first records for China.     

On new Jurassic Rissooidea and Zygopleuroidea convergently similar to them (Gastropoda: Pectinibranchia)

A new genus, Boreomica gen. nov., is established; it comprises small-sized gastropods widespread in the Jurassic of the Russian Plate, the taxonomic position of which was ambiguously treated by previous authors. The new genus is assigned to the family Rissoidae. The species composition and stratigraphical and geographical distribution of the genus and its species are discussed. From the Jurassic of the Russian Plate, Callovian Boreomica exigua (Gerasimov, 1992), the type species of the genus, and Kimmeridgian–Volgian Boreomica undulata (Tullberg, 1881), and members of the genus without species status from the Bathonian and Upper Oxfordian are described. Conchological polymorphism of species connected with their eurybiontic characteristics is discussed. Based on the study of samples of the species B. exigua from different types of facies, two subspecies are recognized, B. exigua exigua and B. exigua arenosa subsp. nov. Finds of gastropods morphologically similar to Boreomica are discussed: Katosira? sp. from Mitta et al., 2004, “Procerithium?” volgense Gerasimov, 1955, “Eulima” pusilla Tullberg, 1881, and “Hudlestonella” caleptra sensu Gerasimov, 1992 are considered. It is concluded that E. pusilla and H. caleptra are unknown zygopleurids, Katosira? sp. is likely a poorly preserved Katosira, and “Procerithium?” volgense is represented by a mixture of several species belonging to different genera: several zygopleurid species, the rissoids Boreomica undulata and Bralitzia. Shells of P. volgense in the P.A. Gerasimov’s collection from the Craspedites nodiger Zone are described as Laevipleura sp.     

Light availability and soil flooding regulate photosynthesis of an imperiled shrub in lowland forests of the Mississippi Alluvial Valley,USA

Physiological responses to light availability and soil flooding on Lindera melissifolia (Walt.) Blume were studied. Shrubs were grown under 70, 37 or 5% of full sunlight with either 0, 45, or 90 d of soil flooding. We measured leaf photosynthetic rate (PN) to test the hypothesis that soil flooding reduces P _N in L. melissifolia following shrub acclimation to low light availability. Results showed that light availability and soil flooding interacted to affect P _N. In the 0 d and 45 d flooding regimes (flood water removed 36–39 d prior to measurement), P _N was similar between shrubs receiving 70% or 37% light, and these shrubs had 147% greater P _N than shrubs receiving 5% light. Shrubs receiving 90 d of soil flooding had similar low rates of area-based P _N regardless of light level. Similar P _N between 0 d and 45 d flooded shrubs indicated physiological recovery following removal of flood water.     

Response of three arid zone floodplain plant species to inundation

For species to persist on floodplains and in temporary wetlands in arid climates, where large and unpredictable water level fluctuations are common, at least one life history stage must be able to survive inundation. We investigated the survival and performance (RGR, total biomass and above-to-belowground biomass (A:B)) of three common and often coexisting arid zone floodplain species: Xanthium strumarium, Cyperus gymnocaulos and Ludwigia peploides. Observations suggested the species had different responses to inundation, which was tested in a controlled pond experiment. Plants were held at three elevations (+ 10 cm, ? 20 and ? 70 cm) and subjected to three hydrological regimes (static 90 cm, 1 and 5 cm day^?1 inundation) for 16 weeks. Xanthium strumarium died when completely inundated for longer than 4 weeks but when partially flooded survived, showed lower growth rates, increased A:B and produced adventitious roots. C. gymnocaulos showed reduced growth rates when partially flooded and senesced to rhizomes when completely inundated for longer than 4 weeks, which re-sprouted after inundation pressure was removed. L. peploides responded positively to flooding with increased A:B and the production of adventitious roots. The species exhibited three contrasting responses to inundation, which do not necessarily fit neatly within existing water regime functional classification frameworks.     

<Emphasis Type="Italic">Bruguiera hainesii</Emphasis>, a critically endangered mangrove species,is a hybrid between <Emphasis Type="Italic">B. cylindrica</Emphasis> and <Emphasis Type="Italic">B. gymnorhiza</Emphasis> (Rhizophoraceae)

Bruguiera hainesii (Rhizophoraceae) is one of the two Critically Endangered mangrove species listed in the IUCN Red List of Threatened Species. Although the species is vulnerable to extinction, its genetic diversity and the evolutionary relationships with other Bruguiera species are not well understood. Also, intermediate morphological characters imply that the species might be of hybrid origin. To clarify the genetic relationship between B. hainesii and other Bruguiera species, we conducted molecular analyses including all six Bruguiera species using DNA sequences of two nuclear genes (CesA and UNK) and three chloroplast regions (intergenic spacer regions of trnL-trnF, trnS-trnG and atpB-rbcL). For nuclear DNA markers, all nine B. hainesii samples from five populations were heterozygous at both loci, with one allele was shared with B. cylindrica, and the other with B. gymnorhiza. For chloroplast DNA markers, the two haplotypes found in B. hainesii were shared only by B. cylindrica. These results suggested that B. hainesii is a hybrid between B. cylindrica as the maternal parent and B. gymnorhiza as the paternal one. Furthermore, chloroplast DNA haplotypes found in B. hainesii suggest that hybridization has occurred independently in regions where the distribution ranges of the parental species meet. As the IUCN Red List of Threatened Species currently excludes hybrids (except for apomictic plant hybrids), the conservation status of B. hainesii should be reconsidered.     

Interspecific variation in functional traits of oak seedlings (<Emphasis Type="Italic">Quercus ilex,Quercus trojana,Quercus virgiliana</Emphasis>) grown under artificial drought and fire conditions

To face summer drought and wildfire in Mediterranean-type ecosystems, plants adopt different strategies that involve considerable rearrangements of biomass allocation and physiological activity. This paper analyses morphological and physiological traits in seedlings of three oak species (Quercus ilex, Quercus trojana and Quercus virgiliana) co-occurring under natural conditions. The aim of this study was to evaluate species-specific characteristics and the response of these oak seedlings to drought stress and fire treatment. Seedlings were kept in a growth chamber that mimicked natural environmental conditions. All three species showed a good degree of tolerance to drought and fire treatments. Differences in specific biomass allocation patterns and physiological traits resulted in phenotypic differences between species. In Q. ilex, drought tolerance depended upon adjustment of the allocation pattern. Q. trojana seedlings undergoing mild to severe drought presented a higher photosystem II (PSII) efficiency than control seedlings. Moreover, Q. trojana showed a very large root system, which corresponded to higher soil area exploitation, and bigger leaf midrib vascular bundles than the other two species. Morphological and physiological performances indicated Q. trojana as the most tolerant to drought and fire. These characteristics contribute to a high recruitment potential of Q. trojana seedlings, which might be the reason for the dominance of this species under natural conditions. Drought increase as a result of climate change is expected to favour Q. trojana, leading to an increase in its spatial distribution.     

Morphological description of four species belonging to the genus <Emphasis Type="Italic">Nigrobaetis</Emphasis> (Ephemeroptera: Baetidae) from Japan

We associated imagoes and nymphs of four Nigrobaetis species from Japan and described their morphological characters. We found that N. sp. P comprised two Nigrobaetis species in Kanto Plain and in Ishigaki Island, which we described as N. apterus Fujitani n. sp. and N. ishigakiensis Fujitani n. sp., respectively. We also described N. sp. I as N. latus Fujitani n. sp. We recorded N. acinaciger (Kluge), the nymph of which had been confused with N. chocoratus (Gose), from Japan for the first time. We provide identification keys for eight Nigrobaetis species of Japan.     

Crustacean metamorphosis: an omics perspective

We quantified the independent impacts of flooding salinity, flooding depth, and flooding frequency on the native species, Phragmites australis and Scirpus mariqueter, and on the invasive species Spartina alterniflora in the Yangtze River Estuary, China. Total biomass of all three species decreased significantly with increasing salinity, but S. alterniflora was less severely affected than P. australis and S. mariqueter. Elevated flooding depth significantly decreased their live aboveground biomass of P. australis and S. mariqueter, while S. alterniflora still had high live aboveground biomass and total biomass even at the highest flooding depth. These findings indicated that S. alterniflora was more tolerant to experimental conditions than the two native species, and an unavoidable suggestion is the expansion of this non-native species in relation to the native counterparts in future scenarios of increased sea-level and saltwater intrusion. Even so, environmental stresses might lead to significant decreases in total biomass and live aboveground biomass of all three species, which would potentially weaken their ability to trap sediments and accumulate organic matter. However, the relatively high belowground-to-aboveground biomass ratio indicated phenotypic plasticity in response to stressful environmental conditions, which suggest that marsh species can adapt to sea-level rise and maintain marsh elevation.     

Enhancement of hypocotyl elongation by LOV KELCH PROTEIN2 production is mediated by auxin and phytochrome-interacting factors in <Emphasis Type="Italic">Arabidopsis thaliana</Emphasis>

Key message

Auxin and two phytochrome-interacting factors, PHYTOCHROME-INTERACTING FACTOR4 (PIF4) and PIF5, play crucial roles in the enhancement of hypocotyl elongation in transgenic Arabidopsis thaliana plants that overproduce LOV KELCH PROTEIN2 (LKP2).

Abstract

LOV KELCH PROTEIN2 (LKP2) is a positive regulator of hypocotyl elongation under white light in Arabidopsis thaliana. In this study, using microarray analysis, we compared the gene expression profiles of hypocotyls of wild-type Arabidopsis (Columbia accession), a transgenic line that produces green fluorescent protein (GFP), and two lines that produce GFP-tagged LKP2 (GFP-LKP2). We found that, in GFP-LKP2 hypocotyls, 775 genes were up-regulated, including 36 auxin-responsive genes, such as 27 SMALL AUXIN UP RNA (SAUR) and 6 AUXIN/INDOLE-3-ACETIC ACID (AUX/IAA) genes, and 21 genes involved in responses to red or far-red light, including PHYTOCHROME-INTERACTING FACTOR4 (PIF4) and PIF5; and 725 genes were down-regulated, including 15 flavonoid biosynthesis genes. Hypocotyls of GFP-LKP2 seedlings, but not cotyledons or roots, contained a higher level of indole-3-acetic acid (IAA) than those of control seedlings. Auxin inhibitors reduced the enhancement of hypocotyl elongation in GFP-LKP2 seedlings by inhibiting the increase in cortical cell number and elongation of the epidermal and cortical cells. The enhancement of hypocotyl elongation was completely suppressed in progeny of the crosses between GFP-LKP2 lines and dominant gain-of-function auxin-resistant mutants (axr2-1 and axr3-1) or loss-of-function mutants pif4, pif5, and pif4 pif5. Our results suggest that the enhancement of hypocotyl elongation in GFP-LKP2 seedlings is due to the elevated level of IAA and to the up-regulated expression of PIF4 and PIF5 in hypocotyls.

     

Salt and waterlogging stress impacts on seed germination and early seedling growth of selected endemic plant species from Western Australia

Six perennial species endemic to South West Western Australia (Acacia trulliformis, Austrostipa geoffreyi, Banksia oligantha, B. mucronulata, Hakea tuberculata and Orthrosanthus muelleri) were screened for salt tolerance and recovery during seed germination. Growth and survival of 6-month old seedlings of these six plus a further vegetatively propagated species (Myoporum turbinatum) were subsequently examined in response to salt and waterlogging application. Water uptake under elevated saline conditions (200 and 400 mM NaCl) was slow, but not restrictive to germination. Moreover, a large proportion of seeds that were unable to germinate under saline conditions recovered after being transferred to non-saline conditions. Germination, growth and survival varied with species and the salt concentration used. Increasing salt concentrations tended to increase time to germination. Germination of Acacia trulliformis seeds declined exponentially with increasing salinity, and seedlings suffered reduced growth under saline and non-saline waterlogging. Austrostipa geoffreyi seeds were sensitive to saline treatments but seedlings were highly tolerant of both saline and/or waterlogged conditions. Germination of the three proteaceous species declined significantly under highly saline conditions (400 mM NaCl) with seedlings of the two Banksia species not surviving any treatment with the exception of non-saline waterlogging. Seedlings of H. tuberculata were more resilient to treatment conditions. Orthrosanthus muelleri was sensitive to salt stress during germination but was highly resistant to waterlogging, both saline and non-saline. This study provides an insight into the response and resilience of components of the vegetation understorey of saline-affected regions of Western Australia not usually evaluated allowing for more informed restoration.     

Mowing may bring about vegetation change,but its effect is strongly modified by hydrological factors

We assessed the effect of long-term (11 years) mowing with a hand scythe on the distributions of plant species and species turnover within meadow communities dominated by Carex acutiformis and C. acuta in a small lowland river valley subjected to annual flooding. We hypothesized that mowing would trigger the process of species exchange toward multispecies communities according to the abiotic environmental gradients, as has been reported for traditionally used wet meadows. We found that mowing had a much greater impact on the increase in plant species abundance in wetter, subjected to deeper and longer flooding, zone of the valley than in its drier part. The treatment and hydrology had no substantial effect on the sedges and cryptogams while the graminoids and the forbs were the least stable components of the plant communities. We found that annual management was conducive to the appearance of numerous seedlings of Alnus glutinosa in the part of wetland situated close to the valley edge. Surface flooding was found to be a driving force modifying the impact of mowing on sedge meadows. This “hydrological resetting impulse” created a specific floristic reset of the community, bringing it to the more simplified forms. Mowing every 4–5 years at the beginning of August is advisable to protect sedge meadows distributed in flooded small lowland river valleys.