Soil CO2 venting as one of the mechanisms for tolerance of Zn deficiency by rice in flooded soils

We sought to explain rice (Oryza sativa) genotype differences in tolerance of zinc (Zn) deficiency in flooded paddy soils and the counter‐intuitive observation, made in earlier field experiments, that Zn uptake per plant increases with increasing planting density. We grew tolerant and intolerant genotypes in a Zn‐deficient flooded soil at high and low planting densities and found (a) plant Zn concentrations and growth increased with planting density and more so in the tolerant genotype, whereas the concentrations of other nutrients decreased, indicating a specific effect on Zn uptake; (b) the effects of planting density and genotype on Zn uptake could only be explained if the plants induced changes in the soil to make Zn more soluble; and (c) the genotype and planting density effects were both associated with decreases in dissolved CO₂ in the rhizosphere soil solution and resulting increases in pH. We suggest that the increases in pH caused solubilization of soil Zn by dissolution of alkali‐soluble, Zn‐complexing organic ligands from soil organic matter. We conclude that differences in venting of soil CO₂ through root aerenchyma were responsible for the genotype and planting density effects.     

Stem hypertrophic lenticels and secondary aerenchyma enable oxygen transport to roots of soybean in flooded soil

Background and Aims

Aerenchyma provides a low-resistance O₂ transport pathway that enhances plant survival during soil flooding. When in flooded soil, soybean produces aerenchyma and hypertrophic stem lenticels. The aims of this study were to investigate O₂ dynamics in stem aerenchyma and evaluate O₂ supply via stem lenticels to the roots of soybean during soil flooding.

Methods

Oxygen dynamics in aerenchymatous stems were investigated using Clark-type O₂ microelectrodes, and O₂ transport to roots was evaluated using stable-isotope ¹⁸O₂ as a tracer, for plants with shoots in air and roots in flooded sand or soil. Short-term experiments also assessed venting of CO₂ via the stem lenticels.

Key Results

The radial distribution of the O₂ partial pressure (pO₂) was stable at 17 kPa in the stem aerenchyma 15 mm below the water level, but rapidly declined to 8 kPa at 200–300 µm inside the stele. Complete submergence of the hypertrophic lenticels at the stem base, with the remainder of the shoot still in air, resulted in gradual declines in pO₂ in stem aerenchyma from 17·5 to 7·6 kPa at 13 mm below the water level, and from 14·7 to 6·1 kPa at 51 mm below the water level. Subsequently, re-exposure of the lenticels to air caused pO₂ to increase again to 14–17 kPa at both positions within 10 min. After introducing ¹⁸O₂ gas via the stem lenticels, significant ¹⁸O₂ enrichment in water extracted from roots after 3 h was confirmed, suggesting that transported O₂ sustained root respiration. In contrast, slight ¹⁸O₂ enrichment was detected 3 h after treatment of stems that lacked aerenchyma and lenticels. Moreover, aerenchyma accelerated venting of CO₂ from submerged tissues to the atmosphere.

Conclusions

Hypertrophic lenticels on the stem of soybean, just above the water surface, are entry points for O₂, and these connect to aerenchyma and enable O₂ transport into roots in flooded soil. Stems that develop aerenchyma thus serve as a ‘snorkel’ that enables O₂ movement from air to the submerged roots.     

Long-distance transport of gases in plants: a perspective on internal aeration and radial oxygen loss from roots

Internal transport of gases is crucial for vascular plants inhabiting aquatic, wetland or flood‐prone environments. Diffusivity of gases in water is approximately 10 000 times slower than in air; thus direct exchange of gases between submerged tissues and the environment is strongly impeded. Aerenchyma provides a low‐resistance internal pathway for gas transport between shoot and root extremities. By this pathway, O₂ is supplied to the roots and rhizosphere, while CO₂, ethylene, and methane move from the soil to the shoots and atmosphere. Diffusion is the mechanism by which gases move within roots of all plant species, but significant pressurized through‐flow occurs in stems and rhizomes of several emergent and floating‐leaved wetland plants. Through‐flows can raise O₂ concentrations in the rhizomes close to ambient levels. In general, rates of flow are determined by plant characteristics such as capacity to generate positive pressures in shoot tissues, and resistance to flow in the aerenchyma, as well as environmental conditions affecting leaf‐to‐air gradients in humidity and temperature. O₂ diffusion in roots is influenced by anatomical, morphological and physiological characteristics, and environmental conditions. Roots of many (but not all) wetland species contain large volumes of aerenchyma (e.g. root porosity can reach 55%), while a barrier impermeable to radial O₂ loss (ROL) often occurs in basal zones. These traits act synergistically to enhance the amount of O₂ diffusing to the root apex and enable the development of an aerobic rhizosphere around the root tip, which enhances root penetration into anaerobic substrates. The barrier to ROL in roots of some species is induced by growth in stagnant conditions, whereas it is constitutive in others. An inducible change in the resistance to O₂ across the hypodermis/exodermis is hypothesized to be of adaptive significance to plants inhabiting transiently waterlogged soils. Knowledge on the anatomical basis of the barrier to ROL in various species is scant. Nevertheless, it has been suggested that the barrier may also impede influx of: (i) soil‐derived gases, such as CO₂, methane, and ethylene; (ii) potentially toxic substances (e.g. reduced metal ions) often present in waterlogged soils; and (iii) nutrients and water. Lateral roots, that remain permeable to O₂, may be the main surface for exchange of substances between the roots and rhizosphere in wetland species. Further work is required to determine whether diversity in structure and function in roots of wetland species can be related to various niche habitats.     

Pattern and Amount of Aerenchyma Relate to Variable Methane Transport Capacity of Different Rice Cultivars

Abstract: Aerenchyma, developed in both root and aboveground parts of rice plants, is predominantly responsible for plant‐mediated transfer of methane (CH₄) from the soil to the atmosphere. To clarify the pathways of CH₄ transport through the rice plant and find differences that may determine the large¡variation in the patterns of methane transport capacity (MTC) of rice cultivars, we examined the appearance, the distribution pattern, and the density of aerenchyma in different parts of rice¡plants of three widely varying rice cultivars during panicle initiation, flowering, and maturity stages. The data on the amount and density of small (> 1 ¡Á 10³? 5 ¡Á 10³Ìm²), medium (> 5 ¡Á 10³? 20 ¡Á 10³Ìm²) and large aerenchyma lacunae (> 20 ¡Á 10³Ìm²) were collected using a computer assisted image‐analyzing system. The brightfield optical microscopy of roots of all tested rice plants demonstrated the continuity of aerenchyma channels in the roots that function as conduits for bi‐directional transport of gases. The aerenchyma channels of primary roots showed direct connection with those of culms. Intercalary meristems were found at the transition zone of rootaCculm aerenchyma connections. Well‐developed aerenchyma lacunae present in the internodal region of the culm base were uniformly distributed in the peripheral cortical zone. The nodal region had relatively fewer and smaller aerenchyma lacunae that showed a non‐uniform distribution pattern. As a result, few aerenchyma channels continued from the internodal region through to the nodal region. The aerenchyma in the cortex zone of the culm expanded along with the growing secondary tiller, developing continuity between the culm and the secondary tiller. The micrographs of longitudinal sections of different specimens of culmaCleaf sheath intersection showed the continuity of aerenchyma channels from the culm to the leaf. The amount of medium and large aerenchyma lacunae in the leaf sheath was respectively 2 and 33 times greater as compared to those of the tiller. The proportion of the large lacunae in the total amount of aerenchyma in leaf sheath was 75 % as compared to only 8 % in the tiller, revealing higher number and larger size of aerenchyma in the former. There were significant differences in amount and density of aerenchyma between individual cultivars at a given growth stage, as well as in the development patterns. While the amount and density of medium and small aerenchyma lacunae in the internodal region of the culm base did not show any relationship with MTC of rice cultivars, large aerenchyma lacunae exhibited highly significant correlations with MTC of different cultivars, suggesting that the wide variation in MTC of rice plants during different growth stages are related to these structural features.     

Soil‐ and plant‐water dynamics in a C3/C4 grassland exposed to a subambient to superambient CO2 gradient

Plants may be more sensitive to carbon dioxide (CO₂) enrichment at subambient concentrations than at superambient concentrations, but field tests are lacking. We measured soil‐water content and determined xylem pressure potentials and δ¹³C values of leaves of abundant species in a C3/C4 grassland exposed during 1997–1999 to a continuous gradient in atmospheric CO₂ spanning subambient through superambient concentrations (200–560 µmol mol^2?1). We predicted that CO₂ enrichment would lessen soil‐water depletion and increase xylem potentials more over subambient concentrations than over superambient concentrations. Because water‐use efficiency of C3 species (net assimilation/leaf conductance; A/g) typically increases as soils dry, we hypothesized that improvements in plant‐water relations at higher CO₂ would lessen positive effects of CO₂ enrichment on A/g. Depletion of soil water to 1.35 m depth was greater at low CO₂ concentrations than at higher CO₂ concentrations during a mid‐season drought in 1998 and during late‐season droughts in 1997 and 1999. During droughts each year, mid‐day xylem potentials of the dominant C4 perennial grass (Bothriochloa ischaemum (L.) Keng) and the dominant C3 perennial forb (Solanum dimidiatum Raf.) became less negative as CO₂ increased from subambient to superambient concentrations. Leaf A/g—derived from leaf δ¹³C values—was insensitive to feedbacks from CO₂ effects on soil water and plant water. Among most C3 species sampled—including annual grasses, perennial grasses and perennial forbs—A/g increased linearly with CO₂ across subambient concentrations. Leaf and air δ¹³C values were too unstable at superambient CO₂ concentrations to reliably determine A/g. Significant changes in soil‐ and plant‐water relations over subambient to superambient concentrations and in leaf A/g over subambient concentrations generally were not greater over low CO₂ than over higher CO₂. The continuous response of these variables to CO₂ suggests that atmospheric change has already improved water relations of grassland species and that periodically water‐limited grasslands will remain sensitive to CO₂ enrichment.     

Ethylene‐dependent aerenchyma formation in adventitious roots is regulated differently in rice and maize

In roots of gramineous plants, lysigenous aerenchyma is created by the death and lysis of cortical cells. Rice (Oryza sativa) constitutively forms aerenchyma under aerobic conditions, and its formation is further induced under oxygen‐deficient conditions. However, maize (Zea mays) develops aerenchyma only under oxygen‐deficient conditions. Ethylene is involved in lysigenous aerenchyma formation. Here, we investigated how ethylene‐dependent aerenchyma formation is differently regulated between rice and maize. For this purpose, in rice, we used the reduced culm number1 (rcn1) mutant, in which ethylene biosynthesis is suppressed. Ethylene is converted from 1‐aminocyclopropane‐1‐carboxylic acid (ACC) by the action of ACC oxidase (ACO). We found that OsACO5 was highly expressed in the wild type, but not in rcn1, under aerobic conditions, suggesting that OsACO5 contributes to aerenchyma formation in aerated rice roots. By contrast, the ACO genes in maize roots were weakly expressed under aerobic conditions, and thus ACC treatment did not effectively induce ethylene production or aerenchyma formation, unlike in rice. Aerenchyma formation in rice roots after the initiation of oxygen‐deficient conditions was faster and greater than that in maize. These results suggest that the difference in aerenchyma formation in rice and maize is due to their different mechanisms for regulating ethylene biosynthesis.     

Global change and root function

Global change includes land-use change, elevated CO₂ concentrations, increased temperature and increased rainfall variability. All four aspects by themselves and in combination will influence the role of roots in linking below- and above-ground ecosystem function via organic and inorganic resource flows. Root-mediated ecosystem functions which may be modified by global change include below-ground resource (water, nutrients) capture, creation and exploitation of spatial heterogeneity, buffering of temporal variations in above-ground factors, supply and storage of C and nutrients to the below-ground ecosystem, mobilization of nutrients and C from stored soil reserves, and gas exchange between soil and atmosphere including the emission from soil of greenhouse gases. The theory of a functional equilibrium between root and shoot allocation is used to explore predicted responses to elevated CO₂ in relation to water or nutrient supply as limiting root function. The theory predicts no change in root:shoot allocation where water uptake is the limiting root function, but substantial shifts where nutrient uptake is (or becomes) the limiting function. Root turnover will not likely be influenced by elevated CO₂, but by changes in regularity of water supply. A number of possible mechanisms for root-mediated N mineralization is discussed in the light of climate change factors. Rhizovory (root consumption) may increase under global change as the balance between plant chemical defense and adapted root consuming organisms may be modified during biome shifts in response to climate change. Root-mediated gas exchange allows oxygen to penetrate into soils and methane (CH₄) to escape from wetland soils of tundra ecosystems as well as tropical rice production systems. The effect on net greenhouse gas emissions of biome shifts (fens replacing bogs) as well as of agricultural land management will depend partly on aerenchyma in roots.     

Aerenchyma formation and radial O2 loss along adventitious roots of wheat with only the apical root portion exposed to O2 deficiency

This study investigated aerenchyma formation and function in adventitious roots of wheat (Triticum aestivum L.) when only a part of the root system was exposed to O₂ deficiency. Two experimental systems were used: (1) plants in soil waterlogged at 200 mm below the surface; or (2) a nutrient solution system with only the apical region of a single root exposed to deoxygenated stagnant agar solution with the remainder of the root system in aerated nutrient solution. Porosity increased two‐ to three‐fold along the entire length of the adventitious roots that grew into the water‐saturated zone 200 mm below the soil surface, and also increased in roots that grew in the aerobic soil above the water‐saturated zone. Likewise, adventitious roots with only the tips growing into deoxygenated stagnant agar solution developed aerenchyma along the entire main axis. Measurements of radial O₂ loss (ROL), taken using root‐sleeving O₂ electrodes, showed this aerenchyma was functional in conducting O_2. The ROL measured near tips of intact roots in deoxygenated stagnant agar solution, while the basal part of the root remained in aerated solution, was sustained when the atmosphere around the shoot was replaced by N₂. This illustrates the importance of O₂ diffusion into the basal regions of roots within an aerobic zone, and the subsequent longitudinal movement of O₂ within the aerenchyma, to supply O₂ to the tip growing in an O₂ deficient zone.     

Effects of free-air CO2 enrichment (FACE) on CH4 emission from a rice paddy field

Methane (CH₄) is a particularly potent greenhouse gas with a radiative forcing 23 times that of CO₂ on a per mass basis. Flooded rice paddies are a major source of CH₄ emissions to the Earth's atmosphere. A free‐air CO₂ enrichment (FACE) experiment was conducted to evaluate changes in crop productivity and the crop ecosystem under enriched CO₂ conditions during three rice growth seasons from 1998 to 2000 in a rice paddy at Shizukuishi, Iwate, Japan. To understand the influence of elevated atmospheric CO₂ concentrations on CH₄ emission, we measured methane flux from FACE rice fields and rice fields with ambient levels of CO₂ during the 1999 and 2000 growing seasons. Methane production and oxidation potentials of soil samples collected when the rice was at the tillering and flowering stages in 2000 were measured in the laboratory by the anaerobic incubation and alternative propylene substrates methods, respectively. The average tiller number and root dry biomass were clearly larger in the plots with elevated CO₂ during all rice growth stages. No difference in methane oxidation potential between FACE and ambient treatments was found, but the methane production potential of soils during the flowering stage was significantly greater under FACE than under ambient conditions. When free‐air CO₂ was enriched to 550 ppmv, the CH₄ emissions from the rice paddy field increased significantly, by 38% in 1999 and 51% in 2000. The increased CH₄ emissions were attributed to accelerated CH₄ production potential as a result of more root exudates and root autolysis products and to increased plant‐mediated CH₄ emissions because of the larger rice tiller numbers under FACE conditions.     

Influence of rhizodeposition under elevated CO2 on plant nutrition and soil organic matter

Atmospheric CO₂ concentrations can influence ecosystem carbon storage through net primary production (NPP), soil carbon storage, or both. In assessing the potential for carbon storage in terrestrial ecosystems under elevated CO₂, both NPP and processing of soil organic matter (SOM), as well as the multiple links between them, must be examined. Within this context, both the quantity and quality of carbon flux from roots to soil are important, since roots produce specialized compounds that enhance nutrient acquisition (affecting NPP), and since the flux of organic compounds from roots to soil fuels soil microbial activity (affecting processing of SOM).From the perspective of root physiology, a technique is described which uses genetically engineered bacteria to detect the distribution and amount of flux of particular compounds from single roots to non-sterile soils. Other experiments from several labs are noted which explore effects of elevated CO₂ on root acid phosphatase, phosphomonoesterase, and citrate production, all associated with phosphorus nutrition. From a soil perspective, effects of elevated CO₂ on the processing of SOM developed under a C4 grassland but planted with C3 California grassland species were examined under low (unamended) and high (amended with 20 g m^–2 NPK) nutrients; measurements of soil atmosphere 13C combined with soil respiration rates show that during vegetative growth in February, elevated CO₂ decreased respiration of carbon from C4 SOM in high nutrient soils but not in unamended soils.This emphasis on the impacts of carbon loss from roots on both NPP and SOM processing will be essential to understanding terrestrial ecosystem carbon storage under changing atmospheric CO₂ concentrations.Abbreviations SOM soil organic matter - NPP net primary productivity - NEP net ecosystem productivity - PNPP p-nitrophenyl phosphate     

Response of soil carbon dioxide fluxes,soil organic carbon and microbial biomass carbon to biochar amendment: a meta‐analysis

Biochar as a carbon‐rich coproduct of pyrolyzing biomass, its amendment has been advocated as a potential strategy to soil carbon (C) sequestration. Updated data derived from 50 papers with 395 paired observations were reviewed using meta‐analysis procedures to examine responses of soil carbon dioxide (CO₂) fluxes, soil organic C (SOC), and soil microbial biomass C (MBC) contents to biochar amendment. When averaged across all studies, biochar amendment had no significant effect on soil CO₂ fluxes, but it significantly enhanced SOC content by 40% and MBC content by 18%. A positive response of soil CO₂ fluxes to biochar amendment was found in rice paddies, laboratory incubation studies, soils without vegetation, and unfertilized soils. Biochar amendment significantly increased soil MBC content in field studies, N‐fertilized soils, and soils with vegetation. Enhancement of SOC content following biochar amendment was the greatest in rice paddies among different land‐use types. Responses of soil CO₂ fluxes and MBC to biochar amendment varied with soil texture and pH. The use of biochar in combination with synthetic N fertilizer and waste compost fertilizer led to the greatest increases in soil CO₂ fluxes and MBC content, respectively. Both soil CO₂ fluxes and MBC responses to biochar amendment decreased with biochar application rate, pyrolysis temperature, or C/N ratio of biochar, while each increased SOC content enhancement. Among different biochar feedstock sources, positive responses of soil CO₂ fluxes and MBC were the highest for manure and crop residue feedstock sources, respectively. Soil CO₂ flux responses to biochar amendment decreased with pH of biochar, while biochars with pH of 8.1–9.0 had the greatest enhancement of SOC and MBC contents. Therefore, soil properties, land‐use type, agricultural practice, and biochar characteristics should be taken into account to assess the practical potential of biochar for mitigating climate change.     

Climatic role of terrestrial ecosystem under elevated CO2: a bottom‐up greenhouse gases budget

The net balance of greenhouse gas (GHG) exchanges between terrestrial ecosystems and the atmosphere under elevated atmospheric carbon dioxide (CO₂) remains poorly understood. Here, we synthesise 1655 measurements from 169 published studies to assess GHGs budget of terrestrial ecosystems under elevated CO₂. We show that elevated CO₂ significantly stimulates plant C pool (NPP) by 20%, soil CO₂ fluxes by 24%, and methane (CH₄) fluxes by 34% from rice paddies and by 12% from natural wetlands, while it slightly decreases CH₄ uptake of upland soils by 3.8%. Elevated CO₂ causes insignificant increases in soil nitrous oxide (N₂O) fluxes (4.6%), soil organic C (4.3%) and N (3.6%) pools. The elevated CO₂‐induced increase in GHG emissions may decline with CO₂ enrichment levels. An elevated CO₂‐induced rise in soil CH₄ and N₂O emissions (2.76 Pg CO₂‐equivalent year^?1) could negate soil C enrichment (2.42 Pg CO₂ year^?1) or reduce mitigation potential of terrestrial net ecosystem production by as much as 69% (NEP, 3.99 Pg CO₂ year^?1) under elevated CO₂. Our analysis highlights that the capacity of terrestrial ecosystems to act as a sink to slow climate warming under elevated CO₂ might have been largely offset by its induced increases in soil GHGs source strength.     

Shallow depth placement of (NH4)2SO4 in submerged rice soils as related to gaseous losses of fertilizer nitrogen and fertilizer efficiency

Summary When nitrogen fertilizers are applied to rice, growing under submerged conditions, substantial gaseous losses of fertilizer nitrogen have been observed.Placement of the fertilizer at shallow depth greatly reduces these losses. A balance experiment using six different rice soils was carried out in a greenhouse. N¹⁵-labelled (NH₄)₂SO₄ (atom excess of 10% N-15) was applied on the surface and at 7 cm depth. Analysis of soil, roots and shoots showed that the difference in utilization of fertiliser nitrogen for surface and depth placement in pots could be accounted for by the difference in gaseous loss of fertilizer-N.     

Soil carbon dioxide and mineral accumulation in citrus seedlings (Citrus sinensis var. Bessie)

Summary This experiment was conducted in a greenhouse to study the influence of soil CO₂ differential treatments on plant response, concentrations of nutrients in soils and plants, and total nutrients per plant (Citrus sinensis var. Bessie). Higher levels of soil CO₂, applied to the roots, significantly increased the amount of dry weight per seedling, the height of seedling, and decreased the concentrations of N, P, Ca, Mg, and Mn in the tops. The dry weight of roots supplied with high soil CO₂ was decreased, while the concentrations of Mg and Mn were increased. Concentrations of N, P, K, and B in the roots were also reduced due to high level of soil CO₂. Only total K and Mg per plant were increased with an increased soil CO₂ supply. No significant interactions were found between the soil CO₂ treatments and years of experiment. University of California, Citrus Research Center and Agricultural Station, Riverside, California. The research reported in this paper was supported in part by NSF Grant GB-19916.     

The effects of elevated atmospheric CO2 on the amount and depth distribution of plant water uptake in a California annual grassland

Soil moisture profiles can affect species composition and ecosystem processes, but the effects of increased concentrations of atmospheric carbon dioxide ([CO₂]) on the vertical distribution of plant water uptake have not been studied. Because plant species composition affects soil moisture profiles, and is likely to shift under elevated [CO₂], it is also important to test whether the indirect effects of [CO₂] on soil water content may depend on species composition. We examined the effects of elevated [CO₂] and species composition on soil moisture profiles in an annual grassland of California. We grew monocultures and a mixture of Avena barbata and Hemizonia congesta– the dominant species of two phenological groups – in microcosms exposed to ambient (～370 μmol mol^?1) and elevated (～700 μmol mol^?1) [CO₂]. Both species increased intrinsic and yield‐based water use efficiency under elevated [CO₂], but soil moisture increased only in communities with A. barbata, the dominant early‐season annual grass. In A. barbata monocultures, the [CO₂] treatment did not affect the depth distribution of soil water loss. In contrast to communities with A. barbata, monocultures of H. congesta, a late‐season annual forb, did not conserve water under elevated [CO₂], reflecting the increased growth of these plants. In late spring, elevated [CO₂] also increased the efficiency of deep roots in H. congesta monocultures. Under ambient [CO₂], roots below 60 cm accounted for 22% of total root biomass and were associated with 9% of total water loss, whereas in elevated [CO₂], 16% of total belowground biomass was associated with 34% of total water loss. Both soil moisture and isotope data showed that H. congesta monocultures grown under elevated [CO₂] began extracting water from deep soils 2 weeks earlier than plants in ambient [CO₂].     

An oxygen-mediated positive feedback between elevated carbon dioxide and soil organic matter decomposition in a simulated anaerobic wetland

We examined the effects of elevated atmospheric CO₂ on soil carbon decomposition in an experimental anaerobic wetland system. Pots containing either bare C₄‐derived soil or the C₃ sedge Scirpus olneyi planted in C₄‐derived soil were incubated in greenhouse chambers at either ambient or twice‐ambient atmospheric CO₂. We measured CO₂ flux from each pot, quantified soil organic matter (SOM) mineralization using δ¹³C, and determined root and shoot biomass. SOM mineralization increased in response to elevated CO₂ by 83–218% (P<0.0001). In addition, soil redox potential was significantly and positively correlated with root biomass (P= 0.003). Our results (1) show that there is a positive feedback between elevated atmospheric CO₂ concentrations and wetland SOM decomposition and (2) suggest that this process is mediated by the release of oxygen from the roots of wetland plants. Because this feedback may occur in any wetland system, including peatlands, these results suggest a limitation on the size of the carbon sink presented by anaerobic wetland soils in a future elevated‐CO₂ atmosphere.     

Root growth,aerenchyma development,and oxygen transport in rice genotypes subjected to drought and waterlogging

Soils under field conditions may experience fluctuating soil water regimes ranging from drought to waterlogging. The inability of roots to acclimate to such changes in soil water regimes may result in reduced growth and function thereby, dry matter production. This study compared the root and shoot growth, root aerenchyma development, and associated root oxygen transport of aerobic and irrigated lowland rice genotypes grown under well-watered (control), waterlogged, and droughted soil conditions for 30 days. The aerobic genotypes were as tolerant as the irrigated lowland genotypes under waterlogging because of their comparable abilities to enhance aerenchyma that effectively facilitated O₂ diffusion to the roots for maintaining root growth and dry matter production. Under drought, aerobic genotypes were more tolerant than the irrigated lowland genotypes due to their higher ability to maintain nodal root production, elongation, and branching, thus, less reduction in dry matter production. Aerenchyma was also formed in droughted roots regardless of genotypes, but was resistant to internal O₂ transport under O₂ deficiency. The ability of roots to resist temporal variations in drought and waterlogging stresses might have strong implications for the adaptation of rice growing in environments with fluctuating soil water regimes.     

Soil acidification induced by elevated atmospheric CO2

Soil acidification is a very important process in the functioning of earth's ecosystems. A major source of soil acidity is CO₂, derived from the respiration of plant roots and microbes, which forms carbonic acid in soil waters. Because elevated atmospheric CO₂ often stimulates respiration of soil biota in experiments that test ecosystem effects of elevated atmospheric CO₂, we hypothesize that rising atmospheric CO₂ (which has increased from ～200 ppm since the interglacial and may exceed 550 ppm by the end of the 21st century) is significantly increasing acid inputs to soils. Here, using column‐leaching experiments with contrasting soils, we demonstrate that soil CO₂ is a much more potent agent of soil acidification than is generally appreciated, capable of displacing almost all exchangeable base cations in soils, and even elevating Al(III) concentrations in H₂CO₃‐acidified soil waters. The potent soil acidifying potential of soil H₂CO₃ is attributed to the low pK_a,1 of molecular H₂CO₃ (3.76 at 25°C), which contrasts greatly with that of (a convention that combines CO₂ (aq) and molecular H₂CO₃, the pK_a,1 of which is 6.36 at 25°C). This distinction is significant for soil systems because of soil's greatly elevated CO₂, their variety of sinks for H⁺, and the wide range of contact times between soil solids, water, and gas. Modelling suggests that a doubling of atmospheric CO₂ may increase acid inputs from carbonic acid leaching by up to 50%. Combined with the results of CO₂ studies in whole ecosystems, this implies that increases in atmospheric CO₂ since the interglacial have gradually acidified soils, especially poorly buffered soils, throughout the world.     

Changes in soil CO2 and O2 concentrations when radiata pine is grown in competition with pasture or weeds and possible feedbacks with radiata pine root growth and respiration

This study examined the reciprocal effects of growing ryegrass, lotus and other weed species in competition with radiata pine on soil CO₂ and O₂ concentrations and on the growth and root respiration of the radiata pine. Soil O₂ concentrations decreased and soil CO₂ concentrations increased with increasing soil depth. Radiata pine plus competing species slightly reduced soil O₂ concentrations and markedly increased soil CO₂ concentrations (up to 40 mmol mol⁻¹) compared with radiata pine alone. The dry weights of shoots and roots, and the root respiration rates of radiata pine grown with competing vegetation were much less than those for radiata pine alone. This probably was not solely caused by competition for nutrients water or light since adequate water and nutrients were supplied to all treatments and the radiata pine overtopped the competing vegetation. When radiata pine roots were raised in NaHCO₃ solutions equivalent to a range of CO₂ concentrations, succinate dehydrogenase activity (a metabolic indicator of mitochondrial respiration) and elongation rates of roots decreased as CO₂ concentrations increased from 0 to 40 mmol mol⁻¹. This suggests that the elevated CO₂ concentrations found in the experiments in soil was the cause, at least in part, of the reduced growth of radiata pine in competition with other species. This revised version was published online in June 2006 with corrections to the Cover Date.     

Effects of CO2, CH4 and N2 on growth and nutrition of rice seedlings

Summary Flooded soils, which accumulate gaseous products of anaerobic fermentation, are often associated with poor rice plant growth. In the present experiment the effects of CO₂, CH₄, N₂, and air on rice seedling growth and nutrition were evaluated. Nutrient culture techniques were used to avoid secondary soil effects normally experienced.Carbon dioxide gas in the root zone of rice reduced seedling growth significantly, whereas CH₄ and N₂ had no significant effect. Methane gave no stimulatory benefits, unlike results reported by some earlier workers. Of three major nutrient elements studied, P uptake was affected more than N or K. Phosphorus uptake was significantly reduced in leaves and sheaths by all three gases, but was significantly increased in roots. This suggests an immobilization mechanism affecting P in roots, and since CO₂, CH₄, and N₂ behaved similarly in contrast to air, a lack of oxygen in the root system is suspected as the causal mechanism rather than toxic effects of gases. Effects on N and K uptake were minimal and insignificant.Contribution from the Department of Agronomy and Range Science, University of California, Davis, California 95616.Contribution from the Department of Agronomy and Range Science, University of California, Davis, California 95616.