Ultrastructural pattern of the nucleus of Entamoeba coli

The ultrastructural organization model of the nucleus of Entamoeba coli, as outlined on the basis of our electron microscope research, shows the following characteristics: (1) karyosome located eccentrically in the nucleoplasm (in the equatorial sections of the nucleus), the heterochromatin laid out in rough, tangled sinuous bands; (2) “ball of thread-like” formations at the level of the heterochromatin border; and (3) circular dark bodies falling into two morphological types on account of their size, the “larger inclusions” type being morphologically similar to the “button bodies” of Entamoeba histolytica according to Ludwik &; Shipstone (1970). Characteristic organized clumps of these structures have not been described before and are especially evident in the cystic nuclei. These findings are discussed in relation to the nuclear organization pictures given by E. histolytica, E. moshkovskii, and E. invadens under the electron microscope.     

Egg structures of four Nabis species (Rhynchota : Nabidae)

Despite the numerous works on insect egg structure, detailed studies on Nabis genus (Rhynchota : Nabidae) have not been carried out previously. The external morphology and internal chorionic structure of the eggs of Nabis pseudoferus pseudoferus Remane, Nabis occidentalis Rieger, Nabis punctatus Costa and Nabis rugosus L. were investigated, using scanning electron microscopy, to improve our knowledge of their organization. To assess their role in taxonomy, a comparison between the eggs of the 4 species under consideration was carried out. The eggs are jar-shaped with the front end narrowed in a “collar” and closed by an operculum. The chorion, except in the regions of the collar and the operculum, is organized in an outer layer of about 4–5 μm, separated from the inner surface by a “pillars” layer of about 0.5–1 μm. In the region of the collar, the chorion has small internal channels which represent the aeropyles; their number varies very considerably even within the same species. The operculum is made up of closed spaces filled with air in communication with the aeropyles and the “pillars” layer, thus forming a single space that represents the respiratory system. The general shape and characteristics of the eggs of N. pseudoferus, N. occidentalis and N. rugosus are very similar; only N. punctatus can be identified with certainty at the egg stage.     

Overlooked cryptic endemism in copepods: Systematics and natural history of the calanoid subgenus Occidodiaptomus Borutzky 1991 (Copepoda,Calanoida, Diaptomidae)

Our comprehension of the phylogeny and diversity of most inland–water crustaceans is currently hampered by their pronounced morphological bradytely, which contributed to the affirmation of the “Cosmopolitanism Paradigm” of freshwater taxa. However, growing evidence of the existence of cryptic diversity and molecular regionalism is available for calanoid copepods, thus stressing the need for careful morphological and molecular studies in order to soundly investigate the systematics, diversity and distribution patterns of the group.Diaptomid copepods were here chosen as model taxa, and the morphological and molecular diversity of the species belonging to the west-Mediterranean diaptomid subgenus Occidodiaptomus were investigated with the aim of comparing the patterns of morphological and molecular evolution in freshwater copepods. Three species currently lumped under the binomen Hemidiaptomus (Occidodiaptomus) ingens and two highly divergent clades within H. (O.) roubaui were distinguished, thus showing an apparent discordance between the molecular distances recorded and Occidodiaptomus morphological homogeneity, and highlighting a noteworthy decoupling between the morphological and molecular diversity in the subgenus.Current Occidodiaptomus diversity pattern is ascribed to a combined effect of ancient vicariance and recent dispersal events. It is stressed that the lack of sound calibration points for the molecular clock makes it difficult to soundly temporally frame the diversification events of interest in the taxon studied, and thus to asses the role of morphological bradytely and of accelerated molecular evolutionary rates in shaping the current diversity of the group.     

Extended phylogeny of the Craspedida (Choanomonada)

Currently choanoflagellates are classified into two distinct orders: loricate Acanthoecida and non-loricate Craspedida. The morphologically based taxonomy of the order Craspedida is in need of a revision due to its controversial, paraphyletic and inconsistent systematics and nomenclature. In this study, we add molecular data (SSU and parts of the LSU rDNA) of six new Craspedida species isolated from saline, brackish and freshwater habitats to the existing knowledge. Four of these six organisms could be described as new species: Paramonosiga thecata, “Salpingoeca” euryoecia, “Salpingoeca” ventriosa, “Sphaeroeca” leprechaunica, whereas two are assigned to previous morphologically described species: “Salpingoeca” fusiformis Saville Kent, 1880 and “Salpingoeca” longipes Saville Kent, 1880. Paramonosiga is established as a new genus of the Craspedida based on its phylogenetic position. Extending the dataset by six additional sequences shows that the craspedid taxonomy is still unsolved as the type specimen Salpingoeca gracilis has not yet been sequenced and hence a clear assignment to the genus Salpingoeca is not possible. Trying to assign morphological and ecological data to phylogenetic clades is not successful. We give an improved/emended morphological diagnosis for the two redescribed species and add molecular data for all six species, shedding light on their phylogenetic position.     

Ultrastructural similarity in landmark loops of amphibian lampbrush chromosomes

Simultaneous transmission and scanning electron microscopy studies were performed on lampbrush chromosomes of Notophthalmus viridescens and Xenopus laevis. The organization of their normal and landmark loop ribonucleoprotein (RNP) matrices was compared to that of Pleurodeles waltl lampbrush loops, previously described. Ultrastructural observations clearly showed that in the three species, the RNP matrix of normal and landmark loops displayed a common basic structure: an RNP fibril packed into tightly juxtaposed RNP particles of remarkably uniform size, ie 30 nm. Furthermore, analysis of the spatial arrangement of these constitutive RNP fibrils allowed us to establish ultrastructural similarities between the different types of loop matrices of the three species studied. Thus, granular loops with the same organization were found to be present in the three species, whereas Pleurodeles was the only one to exhibit, in its lampbrush chromosomes, the typical globular matrices previously described. “Sequential labelling loops” of Notophthelmus were shown to be similar of both “convoluted dense loops” of Xenopus and “dense loops” of Pleurodeles.     

Some structures in Azolla megaspores,and an anomalous form

On the assumption that the “float” apparatus of Azolla arose by the “capture” and retention of separate floats developed as massulae round abortive megaspores, a model is proposed, accounting hypothetically for the separate origin of three-floated, nine-floated, fifteen-floated and twenty-four-floated species in different types of cytological behaviour during origin of the functional megaspore. It is considered irrelevant to ask whether nine-floated arose from three-floated or vice versa. Each type arose de novo and possibly more than once, out of the initial cytological situation which is constant for all species.An abnormal form of Azolla imbricata is described, which in terms of the model appears to represent a reversion to a Salvinia-like ancestral form, by loss of linked genes responsible for the Azolla “syndrome”.Anatomical and morphological studies on five modern and two Paleocene species are used to illustrate adaptation of perine as float-retaining mechanisms. A new structure, the manicula, produced from the perispore, is described in A. teschiana and A. velus.     

Phylogenetic relationships among monogenean gill parasites (Dactylogyridea, Ancyrocephalidae) infesting tilapiine hosts (Cichlidae): systematic and evolutionary implications

We studied the systematics of 14 species of monogenean (Ancyrocephalidae) gill parasites from West African tilapiine hosts (Cichlidae) using both morphological and genetic data. With these tools, we were able to: (i) confirm the validity of the previously described morphological parasite species and of the genus Scutogyrus; (ii) propose that some stenoxenous species (i.e., parasite species with more than one host) may be composed of sister species (e.g., Cichlidogyrus tilapiae); (iii) state that the use of the morphology of the haptoral sclerites is more suitable to infer phylogenetic relationships than the morphology of the genitalia (which seems to be more useful to resolve species-level identifications, presumably because of its faster rate of change). These results imply that: (i) the specificity of these monogenean parasites is greater than initially supposed (what were thought to be stenoxenous species may be assemblages of oïoxenous sister species); (ii) related species groups (i.e., “tilapiae,” “halli,” and “tiberianus”) have to be, as genus Scutogyrus, validated within the 54 ancyrocephalid species described from 18 species of tilapiine hosts in West Africa, (iii) the group “tilapiae,” due to its morphology and host range, have to be considered as being the most primitive; (iv) the occurrence of lateral transfers and parallel speciation processes are necessary to describe the repartition of the newly described parasite groups on the three host genera studied (Tilapia, Oreochromis, and Sarotherodon).     

Genetic variability of the peripheral population of the greater long-tailed hamster <Emphasis Type="Italic">Tscherskia triton</Emphasis> (De Winton 1899) in the northeastern part of the distribution range based on sequencing data of the control region of mitochondrial DNA

The genetic variability of the greater long-tailed hamster Tscherskia triton of the peripheral population of the southern Russian Far East is evaluated compared to the central populations of China based on the nucleotide sequences of the control region of mitochondrial DNA. The high genetic diversity of the population of the southern part of Russian Far East is established, which does not confirm a hypothesis on reduction of the diversity in the peripheral populations. The presence of three phylogroups is discovered: one within Russia (“northern”) and two within China (“central” and “southern”). A deletion, absent in other taxonomically distant groups of the Old and New World and acquired by the greater long-tailed hamster over the course of its evolutionary history, is present in certain populations of this species. A preliminary hypothesis, according to which the contemporary structure of this species is determined not only by topographical and climatic events, but by human activity as well, is formulated.     

The diversity and longitudinal changes of zooplankton in the lower course of a large, regulated European river (the lower Vistula River, Poland)

The diversity and longitudinal variation of zooplankton in the lower Vistula River were analyzed. Samples were taken from 40 stations located along a 272-km long section of the lower river course. During the study the unique technique of taking samples from “the same water” was used. The zooplankton community was dominated by rotifers and nauplii — larval stages of copepods. The most abundant species were: Brachionus angularis, Brachionus calyciflorus and Brachionus budapestiensis. The zooplankton species diversity in the main channel of the lower Vistula River was similar to other large European rivers; however, its abundance was lower. The diversity, abundance and biomass of potamoplankton steadily decreased downstream. This could be related both to scarcity of storage zones for potamoplankton development in the river due to the extensive regulation processes, and changes in hydrological conditions of the main channel (by the straightening of riverbed) where the samples were collected.     

Updating and Recoding Enamel Microstructure in Mesozoic Mammals: In Search of Discrete Characters for Phylogenetic Reconstruction

The previously unknown enamel microstructure of a variety of Mesozoic and Paleogene mammals ranging from monotremes and docodonts to therians is described and characterized here. The novel information is used to explore the structural diversity of enamel in early mammals and to explore the impact of the new information for systematics. It is presently unclear whether enamel prisms arose several times during mammalian evolution or arose only once with several reversals to prismless structure. At least two undisputed reversions or simplifications are known—in the monotreme clade from Obdurodon to Ornithorhynchus (via Monotrematum?), and (perhaps more than once) within the clade from archaeocete to a variety of odontocete whales. Similarly, both prismatic and nonprismatic enamel is present among docodonts. Seven discrete characters showing enough morphological diversity to be of potential importance in phylogenetic reconstructions may be identified as a more appropriate summary of enamel microstructural diversity among mammaliaforms than the single character “prismatic enamel-present/absent” employed in recent matrices. Inclusion of five of these characters in the matrix of Luo et al. (2002) modifies the original topology by collapsing several nodes involving triconodonts and other nontribosphenic taxa. There is considerable support for prismatic enamel as a synapomorphy of trithelodonts plus Mammaliamorpha, and multituberculates appear to have small or “normal” sized prisms as the ancestral condition, with some (as yet) enigmatic changes to nonprismatic structure in some basal members of the group and the appearance of “gigantoprismatic” structure as an autapomorphic state of less inclusive clades. Other potential qualitative characters and the need for attaining appropriate methods to incorporate quantitative features may be important for future analyses.     

The hidden diversity of Coleodactylus amazonicus (Sphaerodactylinae,Gekkota) revealed by molecular data

Coleodactylus amazonicus, a small leaf-litter diurnal gecko widely distributed in Amazon Basin, has been considered a single species with no significant morphological differences between populations along its range. A recent molecular study, however, detected large genetic differences between populations of central Amazonia and those in the easternmost part of the Amazon Basin, suggesting the presence of taxonomically unrecognised diversity. In this study, DNA sequences of three mitochondrial (16S, cytb, and ND4) and two nuclear genes (RAG-1, c-mos) were used to investigate whether the species currently identified as C.amazonicus contains morphologically cryptic species lineages. The present phylogenetic analysis reveals further genetic subdivision including at least five potential species lineages, restricted to northeastern (lineage A), southeastern (lineage B), central-northern (lineage E) and central-southern (lineages C and D) parts of Amazon Basin. All clades are characterized by exclusive groups of alleles for both nuclear genes and highly divergent mitochondrial haplotype clades, with corrected pairwise net sequence divergence between sister lineages ranging from 9.1% to 20.7% for the entire mtDNA dataset. Results of this study suggest that the real diversity of “C. amazonicus” has been underestimated due to its apparent cryptic diversification.     

A tale of two clades: Comparative study of Glyptodon Owen and Glyptotherium Osborn (Xenarthra,Cingulata, Glyptodontidae)

Glyptodon and Glyptotherium represent the most conspicuous taxa of late Neogene and Pleistocene glyptodonts in South America and North America, respectively. The earliest records of Glyptodon in South America are 1.07 Ma (late early Pleistocene, Calabrian), although the possibility that “Paraglyptodon uquiensis” represents a Pliocene specimen of Glyptodon cannot be rejected. Glyptotherium originated from South American ancestry in northern South America or Central America about 3.9 Ma (early late Pliocene, Zanclean) or earlier. The diversity of South American Glyptodon is currently under study, but preliminary evidence would indicate that no more than three species (G. munizi, G. elongatus and G. reticulatus) are valid, plus a possible new Andean species. In turn, according to the updated taxonomy proposed herein, Glyptotherium includes two chronospecies. The earliest species, Gl. texanum, differs only slightly from the latest species, Gl. cylindricum. The relationship of Glyptodon and Glyptotherium has been problematical since the discovery of the North American lineage, at first identified as various species of Glyptodon and later considered a separate genus. Glyptodon is recognized as a natural group and recent taxonomic and phylogenetic revisions place all North American glyptodontines into Glyptotherium. In this paper, we propose a detailed morphological comparison between the southern South American species of Glyptodon and Glyptotherium in order to identify diagnostic differences and potential synapomorphies. Both genera can be distinguished mainly by differences in the skull, mandible, dentition, dorsal carapace, and caudal armor, Glyptodon being somewhat larger than Glyptotherium. Both clades show a highly conservative evolution, which could be interpreted as an anagenesis. The scarce records of glyptodonts in Central America show more morphological affinity with Glyptotherium than with Glyptodon.     

The polyphyly of Neotragus – Results from genetic and morphometric analyses

Dwarf antelope species were commonly united in the tribe “Neotragini” (Bovidae, Mammalia) due to their general morphological appearance. However, phylogenetic analyses have shown that not all dwarf antelopes are closely related, so it was suggested to restrict the name Neotragini to the type genus Neotragus. In our study we use mitochondrial cytochrome b sequences and linear skull measurements to further investigate the similarity of all three Neotragus species. Our analyses support the close relationship of N. moschatus and N. batesi. However, N. pygmaeus – the type species, which was never before included in phylogenetic analyses – is not closely related. It might share a most recent common ancestor with another “dwarf antelope”, the Klipspringer Oreotragus oreotragus, and the duikers in the taxon Cephalophini. Hence, we suggest resurrecting the genus Nesotragus von Dueben, 1846 for Nesotragus moschatus and N. batesi.     

Roles for modularity and constraint in the evolution of cranial diversity among Anolis lizards

Complex organismal structures are organized into modules, suites of traits that develop, function, and vary in a coordinated fashion. By limiting or directing covariation among component traits, modules are expected to represent evolutionary building blocks and to play an important role in morphological diversification. But how stable are patterns of modularity over macroevolutionary timescales? Comparative analyses are needed to address the macroevolutionary effect of modularity, but to date few have been conducted. We describe patterns of skull diversity and modularity in Caribbean Anolis lizards. We first diagnose the primary axes of variation in skull shape and then examine whether diversification of skull shape is concentrated to changes within modules or whether changes arose across the structure as a whole. We find no support for the hypothesis that cranial modules are conserved as species diversify in overall skull shape. Instead we find that anole skull shape and modularity patterns independently converge. In anoles, skull modularity is evolutionarily labile and may reflect the functional demands of unique skull shapes. Our results suggest that constraints have played little role in limiting or directing the diversification of head shape in Anolis lizards.     

Cranial morphology of the Stellate Sturgeon,Acipenser stellatus Pallas 1771 (Acipenseriformes,Acipenseridae), with notes on the skulls of other sturgeons

Extant members of Acipenseridae are generally classified in four genera: Scaphirhynchus, Pseudoscaphirhynchus, Huso and “Acipenser,” which is widely recognized to be paraphyletic. Advances have been made in understanding the systematic relationships among sturgeons based on both morphological and molecular data. Analysis of mitochondrial DNA data suggested that Pseudoscaphirhynchus should be regarded as nested within “Acipenser,” specifically as sister group to the Stellate Sturgeon, A. stellatus. Recent morphological analyses also recovered this relationship, supported by a number of osteological synapomorphies, although these results were based on few and relatively small individuals. Here we describe the anatomy of the skull of A. stellatus based on newly prepared specimens of adult individuals, as well as examination of a large number of preserved individuals representing a broad range of ontogenetic stages. We present new anatomical data from all regions of the skull (dermatocranium, neurocranium, viscerocranium) and offer interpretations of these and other characters. In particular, we describe the allometry in the snout of A. stellatus, which undergoes substantial elongation relative to other sturgeons. Aspects of the skull of A. stellatus are compared to other members of the family, specifically the course of the occipital sensory canal and the morphology and distribution of cranial spines.     

Genetic structure of diploid-polyploid complex of spined loach genus <Emphasis Type="Italic">Cobitis</Emphasis> (<Emphasis Type="Italic">Cypriniformes,Cobitidae</Emphasis>) in the Lower Danube

The extremely high diversity of spined loach biotypes in the Lower Danube has been detected by biochemical genetic investigation and cytometric analysis of 358 specimens collected in the riverbed and shallow channels. Along with two diploid species (C. elongatoides and C. “tanaitica”), six hybrid forms were revealed, namely, diploid C. elongatoides-“tanaitica”; triploid C. 2 elongatoides-“tanaitica,” C. elongatoides-2 “tanaitica,” and C. 2 elongatoides-species-1; and tetraploid C. 3 elongatoides-“tanaitica” and C. elongatoides-species-2-2 “tanaitica.” In addition, specimens with recombinant genotypes were also found. In spite of the apomictic mode of reproduction, the polyploids did not possess clonal structure, but according to the level of polymorphism and the genotype distribution, they were isomorphous to parental diploid species. Thus, in contrast to the polyploidy in Cobitids of the Dnieper, which have appeared in the basin due to the expansion, the polyploids of the Lower Danube are autochthonous and were derived by crossing with local diploid species. The process is apparently proceeds without any limitations.     

Fine structure of Leptomyxa ambigua n. sp. CCAP 1546/2 strain,formerly known as “Rhizamoeba flabellata” (Amoebozoa,Tubulinea, Leptomyxida)

The species Leptomyxa flabellata was described by Goodey in 1915 and re-isolated by Pussard and Pons in 1976. It seems that it was never seen (or never recognized) again since that time. The strain designated as “Leptomyxa flabellata CCAP 1546/2” was studied by Cann in 1984, however the quality of the electron microscopic images of that time was poor. Based on the cyst structure and size characters, Page in 1988 suggested that this strain is not co-specific with Goodey’s Leptomyxa flabellata, but represents a species ‘Ripidomyxa’ australiensis Chakraborty and Pussard, 1985, nowadays known as Rhizamoeba australiensis. In the present paper light- and electron-microscopic images of CCAP 1546/2 strain, which is now lost, are provided. Based on the morphological evidences it is suggested to establish it in a rank of a new species, Leptomyxa ambigua n. sp. Neither “true” L. flabellata Goodey, 1915 nor original R. australiensis Chakraborty et Pussard, 1985 are nowadays represented in the culture collections, and no original type material is available on both these species.     

Spreading of alien species and diversity of communities

A new species invading a new area may cause a decrease in diversity of the community already present there. Comparison of temporal changes in species diversity of the “new” community (including alien species) with those of the “original” community (including only native species) may clarify our understanding of the effect of alien species. Using a simulation-based modelling approach we considered several scenarios describing the invasion of native communities by alien species and calculated the trends in Shannon-Wiener indices and in the numbers of species of the “original” and “new” communities during the course of the invasion. We found that despite a large increase in the population size of the invasive alien species the diversity of the original community may be little affected. Native species numbers may stay relatively constant for a long time and then suddenly collapse. The results indicate some possibly still concealed consequences of the spread of the invasive ladybird Harmonia axyridis (Pallas).     

Impact of protein diversification on morphometric behavior of Andrographis paniculata Nees

Proteins are important biochemical parameters in genetic diversity and controlling morphological characteristics in plants. In this study, the proteomic and morphometric data of an important medicinal herb “Aci Pa?a” (Andrographis paniculata) were combined together to illustrate their impacts on genetic variation of the plant’s population and to realize the connection between protein patterns and phenotypic behavior of the species. We used three protein extraction buffers including Tris, potassium phosphate, and sodium citrate. The Tris buffer was significantly different (p ≤ 0.01) than other two in terms of the quality and quantity of protein bands by producing 15 types of proteins ranged from 13 to 105 kDa of which two of them were polymorphic. Consequently, a total of 12 accessions of A. paniculata were subjected to morpho-proteomic analyses. The unweighted pair group method with arithmetic average cluster analysis of the accessions based on the protein data and morphological characteristics generated three and four clusters, respectively, at a Euclidean distance of 2.53 for the morphological traits. Moreover, seed proteins analysis revealed that the two polymorphic protein bands sized 20.5 (protein “b”) and 30 kDa (protein “a”) effectively diversified the morphological characteristics and phylogenetic relationships among the 12 accessions of A. paniculata. Interestingly, the protein “b” acted as an activator agent for the number of branches, leaves and total dry weight, while the protein “a” performed a suppressive role for the same traits. Additionally, the two high-weighted faint bands “c” (75 kDa) and “d” (100 kDa) with a very low expression in accession 11228 proved their suppressive role along with the “a” band, while these bands were strongly expressed in the rest of the accessions. These findings suggest that these four proteins should be sequenced and perfectly established for further proteomic analyses. Ultimately, the mentioned proteins can be developed for any prospective breeding program or gene identification.     

Morphogenesis accompanying larval metamorphosis in Plakina trilopha (Porifera, Homoscleromorpha)

Morphological investigations of morphogenesis accompanying the metamorphosis of the cinctoblastula larva of poriferan Plakina trilopha (Homoscleromorpha) have been made. The larva possesses a distinct columnar epithelium which subdivides into three cellular areas: antero-lateral, postero-lateral, and posterior one. Characteristic morphological features of the cells in each area can be used as natural markers when tracing the fate of larval cells during metamorphosis. The ciliated epithelium of the larva is transformed directly into choanoderm and pinacoderm, without losing its organization. This transformation is a peculiar feature of the metamorphosis in Homoscleromorpha. Metamorphosis in P. trilopha is based on epithelial morphogenesis and includes the mechanisms of flattening of the exopinacoderm, evagination and invagination of larval epithelium in the course of the development of the rhagon aquiferous system. The flattening of larval cells during exopinacoderm formation in metamorphosing P. trilopha is a common change of cell shape during epithelial morphogenesis of this species. The separation of proximal fragments of cells has been observed here. This phenomenon, that we have called “cytoplasmic shedding”, appears to play an important role in the change of epithelial cell shape in P. trilopha. Mechanism of epithelial–mesenchymal transition, i.e., ingression of epithelial ciliated cells into the cavity of the metamorphosing larva of P. trilopha participates in mesohylar cell origin.