高等生物丙酮酸脱氢酶复合体活性调节机制

丙酮酸脱氢酶复合体催化丙酮酸的氧化脱羧,在糖代谢中扮演了一个非常关键的角色.该酶是一个具有严密结构的多酶复合体,其活性被一套由磷酸化/去磷酸化的翻译后修饰以及转录水平上的信号调节所组成的复杂机制所精确地调控:E1三个磷酸化位点存在位点特异性,而且在这些位点上四个PDK同工酶表现出的明显差异又为这种调节机制引入了同工酶特异性.     

林肯链霉菌丙氨酸脱氢酶的纯化和性质

采用硫酸铵分级沉淀、DEAE-纤维素52柱层析、亲和蓝柱层析和琼脂糖凝胶Sepharose6B柱层析的方法,分离纯化了林肯链霉菌丙氨酸脱氢酶,用聚丙烯酰胺凝胶电泳鉴定为单一组分。以凝胶过滤和聚丙烯酰胺梯度凝胶电泳测得该酶的分子量为170000,SDS-聚丙烯酰胺凝胶电泳测得其亚基分子量为42500,表明林肯链霉菌丙氨酸脱氢酶由四个相同的亚基组成。该酶加氨反应最适pH为9．0,脱氨反应最适pH为9．5,加氨反应和脱氨反应的最适温度均为50℃。加氨反应丙氨酸脱氢酶的表现米氏常数km值为：丙酮酸2．08×10－4mol／L,NH4+2．00×10-2mol／L,NADH2．38×10-5mol／L;脱氨反应的Km为：L-Ala1．43×10-2mol／L;NAD+6．67×10-5mol／L。     

丙酮酸脱氢酶分形性质的光散射研究

生物大分子的分形性质与其三维结构,柔性,疏水性,进而与活性有重要关系。本文采用动态与静态光散射技术测量了丙酮酸脱氢酶的分维ｄｆ,讨论了上述两种光散方法测量分维各自适用的范围。     

地中海诺卡氏菌丙氨酸脱氢酶的纯化和性质

采用硫酸铵分部沉淀、DEAE纤维素-52柱层析和亲和蓝柱层析的方法,分离纯化了地中海诺卡氏菌(Nocardia mediterranei)U-32丙氨酸脱氢酶(ADH),用聚丙烯酰胺凝肢电泳鉴定为单一组份。以聚丙烯酰胺凝胶梯度电泳测得丙氨酸脱氢酶的分子量为228000,SDS-聚丙烯酰胺凝胶电泳测得其亚基分子量为38000,表明地中海诺卡氏菌U-32丙氢脱氢酶由六个相同的亚基组成。ADH加氨反应最适pH为8．5,脱氨反应最适pH为11．5,ADH的pH稳定范围在pH 7．5-11．5。脱氨反应的最适温度为50℃。ADH的米氏常数KM为：丙酮酸4．88×10-4mol／L;NH+44．03×10-3Mol／L;NADH 6．02×10-5Mol／L;L—Ala7．45×10-3mol／L;NAD+6．67×10-5mol／L。 Hill作图法求得ADH的Hill系数n为：ADH对丙酮酸、NADH和NAD+的Hill系数都为1;对L—Ala和NH4+的Hill系数n值分别为0．52和0．51,ADH对L—Ala和NH+4有负协同效应,由此初步推测ADH是一个调节酶。     

哺乳动物中丙酮酸脱氢酶复合体的活性调节

高等生物的一个重要代谢调控机制是通过对酶的磷酸化和去磷酸化来进行的,哺乳动物的丙酮酸脱氢酶复合体(pyruvate dehydrogenase complex,PDHc)也是如此。PDHc的活性的调节主要是通过对其E1(pyru-vate dehydrogenase,PDH)的磷酸化和去磷酸化来实现的。当机体主要靠储存的脂肪生存而所存的葡萄糖仅供大脑和神经组织等只能依靠葡萄糖来提供能量的器官使用的时候,即葡萄糖缺乏时,就需要抑制PDHc的活性。主要探讨了哺乳动物在特定器官中和特定的一些生理条件下,PDHc活性改变的一些规律。     

巨大芽孢杆菌WSH-002丙氨酸脱氢酶066晶体制备及X-射线衍射分析

丙氨酸脱氢酶可逆催化丙氨酸脱氨生成丙酮酸,在氨基酸和酮酸的合成及代谢中至关重要.本研究通过PCR从巨大芽孢杆菌WSH-002中克隆并构建了丙氨酸脱氢酶基因(aldBM066)的原核表达载体,经原核表达后,采用Ni-NTA亲和层析法和阴离子交换色谱法纯化获得蛋白AldBM066,在289 K下以座滴法进行晶体生长条件筛选和制备.通过对蛋白质结晶条件的筛选,最终在蛋白质浓度为15 mg/mL及含有0.1 mol/L 乙酸钠（pH 5.0）和2.4 mol/L甲酸钠的缓冲液中获得了理想的蛋白质晶体,晶体大小约为210 μm×180 μm×150 μm,X-射线衍射数据显示,该蛋白质晶体衍射分辨率为2.88 A,空间群为三方晶系,晶胞参数为a=b=118.71 A,c=150.51 A,α=β=90°,γ=120°,每个不对称单位中含有1个AldBM066单体,马修斯系数为2.62 A3/Da,溶剂含量约为53.02%.衍射数据的成功收集为解析巨大芽孢杆菌WSH-002中丙氨酸脱氢酶的三维结构奠定了前期基础,将有助于阐明以单体存在的丙氨酸脱氢酶的催化机制.     

细菌黄嘌呤脱氢酶的研究概况

概述了近年来不同细菌黄漂呤脱氢酶的研究概况,因其种类繁多、性质各异,较牛奶黄嘌呤氧化酶相比应当有更广泛的应用前景。     

氨基酸脱氢酶的催化机理、分子改造及合成应用

氨基酸脱氢酶催化可逆的氨基酸氧化脱氨和酮酸的不对称还原胺化反应,热力学上反应平衡倾向于生成氨基酸方向,从原子经济学和对环境影响的角度来看,是具有极大优势的氨基酸合成方法之一。本文将主要阐述近年来在?-氨基酸脱氢酶催化机理、分子改造和合成应用方面的研究进展。     

力复霉素产生菌地中海拟无枝菌酸菌U32丙氨酸脱氢酶基因克隆及表达

丙氨酸脱氢酶(EC1411)可逆催化丙氨酸脱氨生成丙酮酸和NADH。它是生物体内的氨基酸代谢和氨同化途径的关键酶。在地中海拟无枝菌酸菌(Amycolatopsis mediterranei)U32中,丙氨酸脱氢酶的活力与力复霉素的生物合成有负相关现象,其活力受KNO3全局效应的调控。根据结核分枝杆菌(Mycobacterium tuberculosis)和天蓝链霉菌(Streptomyces coelicolor)的丙氨酸脱氢酶氨基酸的保守序列和地中海拟无枝菌酸菌U32对氨基酸密码子的使用偏好,设计一对简并PCR引物。以此引物从地中海拟无枝菌酸菌U32中扩增到一555bp的片段,并以此片段为探针从地中海拟无枝菌酸菌U32 基因组cosmid文库中成功的克隆到了丙氨酸脱氢酶结构基因(ald)。它编码了一个371个氨基酸的蛋白质,基因的GC含量为72.5％,符合链霉菌的基因结构特征。在起始密码子的上游6个碱基处,有一典型的链霉菌核糖体结合位点(RBS)：AGGAGG,第75位的氨基酸为赖氨酸,是丙酮酸结合位点。以pET28b为载体,在E.coli BL21(DE3)中高效表达了ald基因。用IPTG在22℃时诱导得到的丙氨酸脱氢酶活力最高。用HisTag柱纯化了表达的丙氨酸脱氢酶。酶学性质研究表明该酶专一性以LAla和NAD(H)为底物。     

Arthrobacter ureafaciens CZ31丙氨酸脱氢酶可溶性表达及产酶条件优化

【目的】克隆Arthrobacter ureafaciens CZ31丙氨酸脱氢酶的编码基因(alanine dehydrogenase),转化至Escherichia coli Rosetta(DE3)中构建可溶性表达alanine dehydrogenase(ald)的工程菌CZR07并优化产酶条件。【方法】提取A.ureafaciens CZ31菌株的全基因组DNA,设计引物扩增出ald基因,与pET-28a连接后导入E.coli Rosetta中表达并纯化重组蛋白,以单因素实验结果为依据,响应面法优化发酵条件。【结果】ald全长为1119 bp,编码含372个氨基酸残基的蛋白质,分子量约为40 kDa,酶活为2.65 U/mg。响应面分析温度、诱导时间及诱导剂浓度的影响强度为IPTG浓度温度温度×IPTG浓度温度×诱导时间IPTG浓度×诱导时间诱导时间。CZR07摇瓶发酵最佳条件为温度22°C、IPTG 0.7 mmol/L、诱导时间7 h,此条件下重组酶酶活达到15.23 U/mg,与响应面优化的预测值相似,较优化前提高5.75倍。【结论】克隆并实现了CZ31中ald基因的可溶性表达,采用BBD法优化产酶的诱导条件,获得显著的优化效果,为其他工程菌株产酶条件优化提供借鉴。     

Properties of Alanine Dehydrogenase and Aspartase from Propionibacterium freudenreichii subsp. shermanii

During lactate fermentation by Propionibacterium freudenreichii subsp. shermanii ATCC 9614, the only amino acid metabolized was aspartate. After lactate exhaustion, alanine was one of the two amino acids to be metabolized. For every 3 mol of alanine metabolized, 2 mol of propionate, 1 mol each of acetate and CO₂, and 3 mol of ammonia were formed. The specific activity of alanine dehydrogenase was 0.08 U/mg of protein during lactate fermentation, and it increased to 0.9 U/mg of protein after lactate exhaustion. Alanine dehydrogenase and aspartase, key enzymes in the metabolism of alanine and aspartate, respectively, were partially purified, and some of their properties were studied. Alanine dehydrogenase had a pH optimum of 9.2 to 9.6 and high K_m values for both NAD⁺ (1 to 4 mM) and alanine (7 to 20 mM). Activity was inhibited by low concentrations of pyruvate and NADH. The pH optimum of aspartase decreased from ~7.5 to ~6.4 when the MgCl₂ and aspartate concentrations were decreased. Plots of aspartate concentration versus activity showed either hyperbolic or sigmoidal kinetics (interaction coefficient, up to a value of 3.1), depending on pH and MgCl₂ concentration. MgCl₂ was either an activator or an inhibitor, depending on pH and its concentration. Aspartase activity was inhibited by low concentrations of fumarate. The properties of alanine dehydrogenase and aspartase are consistent with the finding that aspartate is metabolized during lactate fermentation, while alanine is only fermented after lactate exhaustion and then at a slow rate.     

Regulation of the ald Gene Encoding Alanine Dehydrogenase by AldR in Mycobacterium smegmatis

The regulatory gene aldR was identified 95 bp upstream of the ald gene encoding l-alanine dehydrogenase in Mycobacterium smegmatis. The AldR protein shows sequence similarity to the regulatory proteins of the Lrp/AsnC family. Using an aldR deletion mutant, we demonstrated that AldR serves as both activator and repressor for the regulation of ald gene expression, depending on the presence or absence of l-alanine. The purified AldR protein exists as a homodimer in the absence of l-alanine, while it adopts the quaternary structure of a homohexamer in the presence of l-alanine. The binding affinity of AldR for the ald control region was shown to be increased significantly by l-alanine. Two AldR binding sites (O1 and O2) with the consensus sequence GA-N₂-ATC-N₂-TC and one putative AldR binding site with the sequence GA-N₂-GTT-N₂-TC were identified upstream of the ald gene. Alanine and cysteine were demonstrated to be the effector molecules directly involved in the induction of ald expression. The cellular level of l-alanine was shown to be increased in M. smegmatis cells grown under hypoxic conditions, and the hypoxic induction of ald expression appears to be mediated by AldR, which senses the intracellular level of alanine.     

Catabolic Function of Compartmentalized Alanine Dehydrogenase in the Heterocyst-Forming Cyanobacterium Anabaena sp. Strain PCC 7120

In the diazotrophic filaments of heterocyst-forming cyanobacteria, an exchange of metabolites takes place between vegetative cells and heterocysts that results in a net transfer of reduced carbon to the heterocysts and of fixed nitrogen to the vegetative cells. Open reading frame alr2355 of the genome of Anabaena sp. strain PCC 7120 is the ald gene encoding alanine dehydrogenase. A strain carrying a green fluorescent protein (GFP) fusion to the N terminus of Ald (Ald-N-GFP) showed that the ald gene is expressed in differentiating and mature heterocysts. Inactivation of ald resulted in a lack of alanine dehydrogenase activity, a substantially decreased nitrogenase activity, and a 50% reduction in the rate of diazotrophic growth. Whereas production of alanine was not affected in the ald mutant, in vivo labeling with [¹⁴C]alanine (in whole filaments and isolated heterocysts) or [¹⁴C]pyruvate (in whole filaments) showed that alanine catabolism was hampered. Thus, alanine catabolism in the heterocysts is needed for normal diazotrophic growth. Our results extend the significance of a previous work that suggested that alanine is transported from vegetative cells into heterocysts in the diazotrophic Anabaena filament.Cyanobacteria such as those of the genera Anabaena and Nostoc grow as filaments of cells (trichomes) that, when incubated in the absence of a source of combined nitrogen, present two cell types: vegetative cells that perform oxygenic photosynthesis and heterocysts that perform N₂ fixation. Heterocysts carry the oxygen-labile enzyme nitrogenase, and, thus, compartmentalization is the way these organisms separate the incompatible activities of N₂ fixation and O₂-evolving photosynthesis (9). In Anabaena and Nostoc, heterocysts are spaced along the filament so that approximately 1 in 10 to 15 cells is a heterocyst. Heterocysts differentiate from vegetative cells in a process that involves execution of a specific program of gene expression (12, 15, 39). In the N₂-fixing filament, the heterocysts provide the vegetative cells with fixed nitrogen, and the vegetative cells provide the heterocysts with photosynthate (38). Two important aspects of the diazotrophic physiology of heterocyst-forming cyanobacteria that are still under investigation include the actual metabolites that are transferred intercellularly and the mechanism(s) of transfer (10).Because the ammonium produced by nitrogenase is incorporated into glutamate to produce glutamine in the heterocyst and because the heterocyst lacks the main glutamate-synthesizing enzyme, glutamine(amide):2-oxoglutarate amino transferase (GOGAT; also known as glutamate synthase), a physiological exchange of glutamine and glutamate resulting in a net transfer of nitrogen from the heterocysts to the vegetative cells has been suggested (21, 36, 37). On the other hand, a sugar is supposed to be transferred from vegetative cells to heterocysts. Because high invertase activity levels are found in the heterocysts (34) and because overexpression of sucrose-degrading sucrose synthase in Anabaena sp. impairs diazotrophic growth (4), it is possible that sucrose is a transferred carbon source. Indeed, determination of ¹⁴C-labeled metabolites in heterocysts isolated from filaments incubated for short periods of time with [¹⁴C]bicarbonate identified sugars and glutamate as possible compounds transferred from vegetative cells to heterocysts (13). However, this study also identified alanine as a metabolite possibly transported from vegetative cells to heterocysts.The cyanobacteria bear a Gram-negative type of cell envelope, carrying an outer membrane (OM) outside the cytoplasmic membrane (CM) and the peptidoglycan layer (9, 15). In filamentous cyanobacteria, whereas the CM and peptidoglycan layer surround each cell, the OM is continuous along the filament, defining a continuous periplasmic space (10, 19). In Anabaena sp. strain PCC 7120, the OM is a permeability barrier for metabolites such as glutamate and sucrose (27). Two possible pathways for intercellular molecular exchange in heterocyst-forming cyanobacteria have been discussed: the periplasm (10, 19) and cell-to-cell-joining proteinaceous structures (11, 22, 25). Whereas the latter would mediate direct transfer of metabolites between the cytoplasm of adjacent cells, the former would require specific CM permeases to mediate metabolite transfer between the periplasm and the cytoplasm of each cell type (10).In Anabaena sp. strain PCC 7120, two ABC-type amino acid transporters have been identified that are specifically required for diazotrophic growth (29, 30). The N-I transporter (NatABCDE), which shows preference for neutral hydrophobic amino acids, is present exclusively in vegetative cells (30). The N-II transporter (NatFGH-BgtA), which shows preference for acidic and neutral polar amino acids, is present in both vegetative cells and heterocysts (29). A general phenotype of mutants of neutral amino acid transporters in cyanobacteria is release into the culture medium of some hydrophobic amino acids, especially alanine (16, 23, 24), which is accumulated at higher levels in the extracellular medium of cultures incubated in the absence than in the presence of a source of combined nitrogen (30).Thus, alanine is a conspicuous metabolite in the diazotrophic physiology of heterocyst-forming cyanobacteria, and the possibility that it moves in either direction between heterocysts and vegetative cells has been discussed (13, 29, 30). Alanine dehydrogenase, which catalyzes the reversible reductive amination of pyruvate, has been detected in several cyanobacteria (8). In Anabaena spp., alanine dehydrogenase has been found at higher levels or exclusively in diazotrophic cultures (26), and in the diazotrophic filaments of Anabaena cylindrica it is present at higher levels in heterocysts than in vegetative cells (33). Open reading frame (ORF) alr2355 of the Anabaena sp. strain PCC 7120 genome is predicted to encode an alanine dehydrogenase (14). In this work we addressed the expression and inactivation of alr2355, identifying it as the Anabaena ald gene and defining an important catabolic role for alanine dehydrogenase in diazotrophy.     

乙醛脱氢酶及其医疗领域研究进展

对乙醛脱氢酶的种类、基本特性、制备、检测及其在医疗领域中应用作了简要的概述,旨在为该酶的进一步研究提供参考。     

Cellular and Subcellular Localization of Hexokinase, Glutamate Dehydrogenase, and Alanine Aminotransferase in the Honeybee Drone Retina

Abstract: Subcellular localization of hexokinase in the honeybee drone retina was examined following fractionation of cell homogenate using differential centrifugation. Nearly all hexokinase activity was found in the cytosolic fraction, following a similar distribution as the cytosolic enzymatic marker, phosphoglycerate kinase. The distribution of enzymatic markers of mitochondria (succinate dehydrogenase, rotenone-insensitive cytochrome c reductase, and adenylate kinase) indicated that the outer mitochondrial membrane was partly damaged, but their distributions were different from that of hexokinase. The activity of hexokinase in purified suspensions of cells was fivefold higher in glial cells than in photoreceptors. This result is consistent with the hypothesis based on quantitative 2-deoxy[³H]glucose autoradiography that only glial cells phosphorylate significant amounts of glucose to glucose-6-phosphate. The activities of alanine aminotransferase and to a lesser extent of glutamate dehydrogenase were higher in the cytosolic than in the mitochondrial fraction. This important cytosolic activity of glutamate dehydrogenase was consistent with the higher activity found in mitochondria-poor glial cells. In conclusion, this distribution of enzymes is consistent with the model of metabolic interactions between glial and photoreceptor cells in the intact bee retina.     

Subcellular Distribution of Aspartate Transaminase,Alanine Amino Transferase,Glutamate Dehydrogenases,and Lactate Dehydrogenase in Tetrahymena*

SYNOPSIS. Mitochondria and peroxisomes were isolated from homogenates of Tetrahymena pyriformis by sedimentation through a sucrose gradient. Succinate dehydrogenase was used as a mitochondrial marker; catalase and isocitrate lyase were used to mark the peroxisomal fraction. Lactate dehydrogenase, glutamate dehydrogenase, and alanine aminotransferase were found only in the mitochondrial fraction. Aspartate transaminase was found in both mitochondrial and peroxisomal fractions.     

植物苹果酸脱氢酶研究进展

苹果酸是植物体内参与C4循环、景天酸循环等众多代谢途径的关键代谢物。苹果酸含量提高的途径主要来自植物体内合成的提高。苹果酸脱氢酶(MDH)可引起草酰乙酸盐的氧化作用以形成苹果酸盐,增加植物体内苹果酸的含量,从而显著提高植物体的耐酸性以及对铝毒的抗性。本文全面回顾了国内外对苹果酸脱氢酶(MDH)在植物生理学、生物化学、分子生物学、系统分化领域的研究进展,并针对其在植物体耐酸性机制机理研究领域所取得的研究成果进行了追溯。     

Cerebral Alanine Transport and Alanine Aminotransferase Reaction: Alanine as a Source of Neuronal Glutamate

Abstract: Alanine transport and the role of alanine amino-transferase in the synthesis and consumption of glutamate were investigated in the preparation of rat brain synaptosomes. Alanine was accumulated rapidly via both the high-and low-affinity uptake systems. The high-affinity transport was dependent on the sodium concentration gradient and membrane electrical potential, which suggests a cotransport with Na⁺. Rapid accumulation of the Na⁺-alanine complex by synaptosomes stimulated activity of the Na⁺/K⁺ pump and increased energy utilization; this, in turn, activated the ATP-producing pathways, glycolysis and oxidative phosphorylation. Accumulation of Na⁺ also caused a small depolarization of the plasma membrane, a rise in [Ca²⁺]₁, and a release of glutamate. Intra-synaptosomal metabolism of alanine via alanine aminotransferase, as estimated from measurements of N fluxes from labeled precursors, was much slower than the rate of alanine uptake, even in the presence of added oxoacids. The velocity of [¹⁵N]alanine formation from [¹⁵N]glutamine was seven to eight times higher than the rate of [¹⁵N]glutamate generation from [¹⁵N]alanine. It is concluded that (a) overloading of nerve endings with alanine could be deleterious to neuronal function because it increases release of glutamate; (b) the activity of synaptosomal alanine aminotransferase is much slower than that of glutaminase and hence unlikely to play a major role in maintaining [glutamate] during neuronal activity; and (c) alanine aminotransferase might serve as a source of glutamate during recovery from ischemia/hypoxia when the alanine concentration rises and that of glutamate falls.