Assessment of the eutrophication status of the Great Barrier Reef lagoon (Australia)

Current scientific consensus is that inshore regions of the central and southern Great Barrier Reef, Australia, are at risk of impacts from increased nutrient (as well as sediment and pesticide) loads delivered to Reef waters. Increases in the discharge of water quality contaminants to the Reef are largely a consequence of the expansion of agricultural practices in northern Queensland catchments following European settlement in the 1850s. In particular, the presence of elevated chlorophyll a and nutrient concentrations in many parts of the inshore Great Barrier Reef together with intense and extensive phytoplankton blooms following the discharge of nutrient-rich river flood waters suggest that the central and southern inshore area of the Great Barrier Reef is likely to be significantly impacted by elevated nutrient loads. The biological consequences of this are not fully quantified, but are likely to include changes in reef condition including hard and soft coral biodiversity, macroalgal abundance, hard coral cover and coral recruitment, as well as change in seagrass distribution and tissue nutrient status. Contemporary government policy is centered around promotion and funding of better catchment management practices to minimize the loss of catchment nutrients (both applied and natural) and the maintenance of a Reef wide water quality and ecosystem monitoring program. The monitoring program is designed to assess trends in uptake of management practice improvements and their associated impacts on water quality and ecosystem status over the next 10 years. A draft set of quantitative criteria to assess the eutrophication status of Great Barrier Reef waters is outlined for further discussion and refinement.     

Some nemerteans (Nemertea) from Queensland and the Great Barrier Reef, Australia

Three species of marine nemerteans described and illustrated from Queensland and the Great Barrier Reef, Australia, include one new genus and two new species: these are the monostiliferous hoplonemerteans Thallasionemertes leucocephala gen. et sp. nov. and Correanemertes polyophthalma sp. nov. A new colour variety of the heteronemertean Micrura callima is also reported, this species previously only being known from Rottnest Island, Western Australia. A key for the field identification of the marine nemerteans recorded from coastal Queensland and the Great Barrier Reef is provided.     

Environmental Records from Great Barrier Reef Corals: Inshore versus Offshore Drivers

The biogenic structures of stationary organisms can be effective recorders of environmental fluctuations. These proxy records of environmental change are preserved as geochemical signals in the carbonate skeletons of scleractinian corals and are useful for reconstructions of temporal and spatial fluctuations in the physical and chemical environments of coral reef ecosystems, including The Great Barrier Reef (GBR). We compared multi-year monitoring of water temperature and dissolved elements with analyses of chemical proxies recorded in Porites coral skeletons to identify the divergent mechanisms driving environmental variation at inshore versus offshore reefs. At inshore reefs, water Ba/Ca increased with the onset of monsoonal rains each year, indicating a dominant control of flooding on inshore ambient chemistry. Inshore multi-decadal records of coral Ba/Ca were also highly periodic in response to flood-driven pulses of terrigenous material. In contrast, an offshore reef at the edge of the continental shelf was subject to annual upwelling of waters that were presumed to be richer in Ba during summer months. Regular pulses of deep cold water were delivered to the reef as indicated by in situ temperature loggers and coral Ba/Ca. Our results indicate that although much of the GBR is subject to periodic environmental fluctuations, the mechanisms driving variation depend on proximity to the coast. Inshore reefs are primarily influenced by variable freshwater delivery and terrigenous erosion of catchments, while offshore reefs are dominated by seasonal and inter-annual variations in oceanographic conditions that influence the propensity for upwelling. The careful choice of sites can help distinguish between the various factors that promote Ba uptake in corals and therefore increase the utility of corals as monitors of spatial and temporal variation in environmental conditions.     

Picoplankton dynamics in Davies Reef lagoon, the Great Barrier Reef, Australia

The diel variations in abundance and frequency of dividing cells(FDC) of coccoid cyanobacteria in a coral reef lagoon were investigatedin June, September and December 1989, and April 1990. Cyanobacteriaand picoplanktonic eukaryotes (<3 µm) were sampledmonthly from January to December 1990. The average abundancesof cyanobacteria and eukaryotes ranged between 1.17–10.0610⁴cells ml^–1 and 0.16–2.4110⁴ cells ml^–1, respectively,with abundances of both being higher in summer (November-April)than in winter (May-October). The ratio of cyanobacteria toeukaryotes fluctuated from 1.93 to 8.67, independent of theseasonal variation in their abundances. The instantaneous growthrate of cyanobacteria, which was estimated from the daytimeabundance increment, ranged between 0.430 and 3.144 day^–1The estimated daily specific growth rate of cyanobacteria bythe FDC method ranged between 0.231 and 0.966 day^–1. InApril, despite the high specific growth rate and low flushingconditions. cyanobacterial abundance showed a cyclic diel pattern,suggesting a strong grazing impact on their population.     

Hemiuridae (Digenea) from marine fishes of the Great Barrier Reef,Queensland, Australia

The following species are described, figured and/or recorded from the Great Barrier Reef at Heron Island or Lizard Island, Queensland, with comparative material reported from other areas of the ocean around Australia or New Guinea: Dinurus longisinus (new synonym: D. hippuri) from Seriola lalandi, Heron Island and Coryphaena hippurus, Papua New Guinea; Ectenurus trachuri from Caranx sexfasciatus, Diploprion bifasciatus, Pterocaesio marri, Seriola lalandi and Atherinomorus capricorniensis, Heron Island; Erilepturus hamati (with 25 new synonyms) from Lutjanus carponotatus, Lizard Island, Platycephalus bassensis, Coff's Harbour, NSW, P. fuscus, Coff's Harbour, NSW and Moreton Bay, Queensland, P. endrachtensis, Sillago analis, S. maculata, S. ciliata, Pseudorhombus arsius and Polydactylus sp. from Moreton Bay, Queensland and Lates calcarifer, Darwin, Northern Territory; Tubulovesicula angusticauda from Echeneis naucrates and Lethrinus miniatus, Heron Island and Anguilla reinhardtii, Moreton Bay and Bribie Island, Queensland; Elytrophalloides humerus from Trachinotus botla and T. coppingeri, Heron Island; Lecithochirium kawakawa from Euthynnus affinis Heron Island and Lizard Island: Lecithochirium cirrhiti (new synonyms: L. sammarae, L. nohu) from Sargocentron rubrum, Heron Island; Lecithochirium caesionis from Pterocaesio marri, heron Island; Plerurus digitatus (new synonyms: P. cynoglossi, P. atulis, P. scomberomori) from Plectropomus leopardus, Heron Island, Lutjanus erythropterus, Variola louti, Scomberomorus semifasciatus, Grammatorcynus bicarinatus and Carangoides embureyi, C. gymnostethoides, Lizard Island, Scomberomorus commerson, Heron Island, Lizard Island, New Britain, Papua New Guinea, Point Lookout, Queensland and Moreton Bay, Queensland, Euthynnus affinis Heron Island, Lizard Island and New Britain, Papua New Guinea, Sphyraena barracuda, Heron Island and Lizard Island, Scomberomorus munroi, S. queenslandicus and Saurida undosquamis, Moreton Bay, Queensland and Chirocentrus dorab, Bundaberg, Queensland. The Lecithochirium species-group Cirrhiti is considered indistiguishable from the species-group Lotellae.     

Enhanced particle-feeding capacity of corals on turbid reefs (Great Barrier Reef, Australia)

Reef corals occur across a wide range of habitats, from offshore clear waters to nearshore sediment-laden environments. This study tests the hypothesis that corals from turbid nearshore areas have greater capacity to utilise suspended sediment as a food source than conspecifics from less turbid and midshelf areas. The hypothesis was tested on two common and widespread coral species on the Great Barrier Reef (Pocillopora damicornis and Acropora millepora). The particle clearance rates of samples from more turbid reefs were two-fourfold those of conspecifics from less turbid and midshelf reefs. Rates of sediment ingestion were generally a linear function of sediment load indicating no significant saturation within the concentration range of 1–30 mg dry weight l⁻¹. Estimated assimilation efficiency of particulate ¹⁴C varied between 50 and 80%, and was maximised for midshelf A. millepora at the lowest sediment concentration, suggesting that heterotrophy is more efficient in oligotrophic habitats. Based on feeding-response curves, assimilation efficiencies, and published records of ambient particle concentrations, representatives of these species on turbid inshore reefs are 10–20 times more heterotrophic on suspended sediment than their conspecifics on less turbid and midshelf reefs. Accepted: 7 September 1999     

A modern soft-bottom, shallow-water crinoid fauna (Echinodermata) from the Great Barrier Reef, Australia

A recent preliminary survey revealed that 12 species of unstalked crinoids occur on a gentle sandy slope (12–18 m depth) at Lizard Island, Great Barrier Reef, Australia; five of which are also found on coral reefs. The other seven appear to constitute a unique assemblage restricted to unconsolidated substrates, where most cling to algae or hide beneath rubble or sponges. Members of this assemblage exhibit all of the basic feeding postures found among reef-dwelling species. However, Comatula rotalaria, which lacks anchoring cirri and bears uniquely differentiated short and long arms, exhibits a posture different from other living crinoids. Quantitative transects reveal apparent depth-related differences in species composition: C. rotalaria dominated the 12 transects in 12–13 m (84% of 82 specimens), while Comatella nigra, Comatula cf. purpurea, Amphimetra cf. tessellata and Zygometra microdiscus accounted for 96% of 54 specimens observed along 12 transects in 16–17 m.     

Population genetics of the fissiparous holothurian Stichopus chloronotus (Aspidochirotida) on the Great Barrier Reef, Australia

 Population genetic structure was studied in one nearshore and two offshore populations of Stichopus chloronotus, a common holothurian species on Indo-Pacific coral reefs. Genetic variation at five polymorphic loci was examined using allozyme electrophoresis. The nearshore population consisted almost exclusively of male individuals, and more males than females were found in all populations studied. Deviations of heterozygosity from that predicted under Hardy-Weinberg equilibrium indicated that asexual reproduction occurred in all populations. Estimates of the level of asexual reproduction using the ratios of the number of sexually produced individuals to sample size, observed genotypic diversity to expected genotypic diversity, and number of genotypes to sample size confirmed that this reproductive mode was more important at the nearshore reef compared to the two offshore reefs. There were large differences in genotypic frequencies between males and females. F-statistics on clonal genotypic frequencies were not statistically significant between populations for neither females or males, suggesting high dispersal of larvae between reefs. A higher mortality of females during larval or early post-settlement stages, or reduced dispersal capability of female larvae are the most likely reasons for biased sex ratios. Accepted: 23 November 1998     

Sedimentary environments of the Central Region of the Great Barrier Reef of Australia

The sediments and calcareous organisms on the outer reefal shelf of the Central Region of the Great Barrier Reef were collected and observed by SCUBA diving and research vessel techniques (including underwater television) to understand the production and processes of deposition of the sediment. The carbonate grains are mainly sand and gravel size and solely of skeletal origin. Over the whole area the major CaCO₃ producers, in order of decreasing importance are: benthic foraminiferans (chiefly Operculina, Amphistegina, Marginopora, Alveolinella and Cycloclypeus), the calcareous green alga Halimeda, molluscs and corals. Coral abundance is high only close to reefs and submerged rocky substrates. Benthic foraminiferal sands dominate the inter-reef areas i.e. the bulk of the shelf, and Halimeda gravels form an outer shelf band between 60 and 100 m depths. Seven distinct facies are recognised after quantitative analyses of the sediments. These are: A. Shelf edge slope (>120 m depth); B. Shelf edge (with rocky outcrops); C. Outer shelf with high Halimeda (>40%); D. Inter-reef I; E. Inter-reef II ( 100 m depth but >2% pelagics); F. Lee-ward reef talus wedge (<2 km from sea level reefs); G. Lagoonal.     

Copepoda associated with the coral Gardineroseris planulata (Dana) on the Great Barrier Reef,northeastern Australia

Three new lichomolgid copepods associated with the scleractinian Gardineroseris planulata (Dana) are described: Sociellus torus, n. gen., n. sp., characterized by a 2-segmented endopod in leg 3 and the lack of an inner seta on the first segment of the endopod in legs 1–3; Odontomolgus pumilus, n. sp., of very small size and having a much elongated free segment in leg 5 of the female; and Paramolgus ampullaceus, n. sp., distinguished by the bottle-shaped genital segment of the female. In addition, the harpacticoid Alteuthellopsis corallina Humes, 1981, is reported from this coral. With the inclusion of 3 species of the poecilostomatoid genus Xarifia already described (Humes, 1985) there are now 7 species of copepods known to be associated with Gardineroseris planulata on the Great Barrier Reef.     

Spatial Variation in Abundance,Size and Orientation of Juvenile Corals Related to the Biomass of Parrotfishes on the Great Barrier Reef,Australia

For species with complex life histories such as scleractinian corals, processes occurring early in life can greatly influence the number of individuals entering the adult population. A plethora of studies have examined settlement patterns of coral larvae, mostly on artificial substrata, and the composition of adult corals across multiple spatial and temporal scales. However, relatively few studies have examined the spatial distribution of small (≤50 mm diameter) sexually immature corals on natural reef substrata. We, therefore, quantified the variation in the abundance, composition and size of juvenile corals (≤50 mm diameter) among 27 sites, nine reefs, and three latitudes spanning over 1000 km on Australia’s Great Barrier Reef. Overall, 2801 juveniles were recorded with a mean density of 6.9 (±0.3 SE) ind.m⁻², with Acropora, Pocillopora, and Porites accounting for 84.1% of all juvenile corals surveyed. Size-class structure, orientation on the substrate and taxonomic composition of juvenile corals varied significantly among latitudinal sectors. The abundance of juvenile corals varied both within (6–13 ind.m⁻²) and among reefs (2.8–11.1 ind.m⁻²) but was fairly similar among latitudes (6.1–8.2 ind.m⁻²), despite marked latitudinal variation in larval supply and settlement rates previously found at this scale. Furthermore, the density of juvenile corals was negatively correlated with the biomass of scraping and excavating parrotfishes across all sites, revealing a potentially important role of parrotfishes in determining distribution patterns of juvenile corals on the Great Barrier Reef. While numerous studies have advocated the importance of parrotfishes for clearing space on the substrate to facilitate coral settlement, our results suggest that at high biomass they may have a detrimental effect on juvenile coral assemblages. There is, however, a clear need to directly quantify rates of mortality and growth of juvenile corals to understand the relative importance of these mechanisms in shaping juvenile, and consequently adult, coral assemblages.     

Reproductive development and timing of tropical sponges (Order Haplosclerida) from the Great Barrier Reef,Australia

Reproductive development of three species of the Haplosclerida, Haliclona amboinensis (Lévi 1961), Haliclona cymiformis (Esper 1794) and Niphates nitida Fromont (1993), was monitored for three years on a fringing reef in the central section of the Great Barrier Reef, Australia. All species are viviparous, and gonochoric. Haliclona amboinensis and N. nitida incubated eggs, embryos and larvae in brood chambers. The branching sponge. H. cymiformis, incubated eggs, embryos, and larvae along the central axis of branches. In all species, sperm cysts in high densities are evenly distributed throughout the mesohyl. Mature larvae of all species are creamy white, oval, parenchymella, with a dark coloured ring at the posterior pole. Eggs, embryos and larvae are present contemporaneously for periods of two consecutive months in individuals of H. cymiformis and seven months in H. amboinensis and N. nitida. The first observation of female reproductive products in H. amboinensis and N. nitida coincided with an increase in water temperature, while cessation of reproductive activity was associated with decreasing water temperature. Onset of reproduction in H. cymiformis coincided with peak sexual and vegetative reproductive activity of its algal symbiont, Ceratodictyon spongiosum.     

Coral Reef Community Composition in the Context of Disturbance History on the Great Barrier Reef,Australia

Much research on coral reefs has documented differential declines in coral and associated organisms. In order to contextualise this general degradation, research on community composition is necessary in the context of varied disturbance histories and the biological processes and physical features thought to retard or promote recovery. We conducted a spatial assessment of coral reef communities across five reefs of the central Great Barrier Reef, Australia, with known disturbance histories, and assessed patterns of coral cover and community composition related to a range of other variables thought to be important for reef dynamics. Two of the reefs had not been extensively disturbed for at least 15 years prior to the surveys. Three of the reefs had been severely impacted by crown-of-thorns starfish outbreaks and coral bleaching approximately a decade before the surveys, from which only one of them was showing signs of recovery based on independent surveys. We incorporated wave exposure (sheltered and exposed) and reef zone (slope, crest and flat) into our design, providing a comprehensive assessment of the spatial patterns in community composition on these reefs. Categorising corals into life history groupings, we document major coral community differences in the unrecovered reefs, compared to the composition and covers found on the undisturbed reefs. The recovered reef, despite having similar coral cover, had a different community composition from the undisturbed reefs, which may indicate slow successional processes, or a different natural community dominance pattern due to hydrology and other oceanographic factors. The variables that best correlated with patterns in the coral community among sites included the density of juvenile corals, herbivore fish biomass, fish species richness and the cover of macroalgae. Given increasing impacts to the Great Barrier Reef, efforts to mitigate local stressors will be imperative to encouraging coral communities to persist into the future.     

Actinosporeans (Myxozoa) from marine oligochaetes of the Great Barrier Reef

Four species of actinosporeans are described from marine oligochaetes (all Tubificidae) from the Great Barrier Reef, Queensland, Australia. They developed in the coelom of the oligochaete and produced spores in groups of eight in the pansporocysts. The new genus Endocapsa is proposed within the family Sphaeractinomyxidae Janiszewska, 1957 on the basis that mature spores have small valve cell processes and non-protruding polar capsules. The type-species, Endocapsa rosulata n. sp., has three valve cell processes, which resemble a rosette, and submerged polar capsules. It infected Heterodrilus cf. keenani from Heron Island and morphologically similar parasites occurred in Thalassodrilides cf. gurwitschi and Heronidrilus sp. from Lizard Island. E. stepheni n. sp. has asymmetrical valve cell processes and submerged polar capsules. It was found in H. cf. keenani and H. queenslandicus from Heron Island. Sphaeractinomyxon leptocapsula n. sp. has thin widely spaced polar capsules and is described from Heronidrilus sp. from Lizard Island. S. ersei Hallett, O'Donoghue & Lester, 1998 infected Tubificidae gen. sp. from Heron Island and S. cf. ersei occurred in Bathydrilus sp., Thalassodrilides cf. gurwitschi and Limnodriloides lateroporus from Lizard Island.     

Endosymbiotic Umagillids (Turbellaria) from Holothurians of the Great Barrier Reef

Seven new species of umagillid turbellarians from the intestine of aspidochirote holothurians of the Great Barrier Reef are described: Cleistogamia heronensis sp.n., C. longicirrus sp.n., C. pulchra sp.n., C. pallii sp.n., C. pyriformis sp.n. and Wahlia stichopi sp.n. as well as Paranotothrix queenslandensis gen.n. sp.n. The new genus is recognized as distinct from Notothrix Hickman, 1955 because the female system lacks a bursal valve, a significant characteristic within the Umagillidae. Examination of this and other characteristics of the family reveal that the division of the family by Stunkard & Corliss in 1950 into the sub-families Collastominae Wahl, 1910, Bicladinae Stunkard & Corliss, 1950 and Umagillinae Wahl, 1910 is supported; further, within the Umagillinae, four subgroups may be recognized: within holothurians are ( i ) the Cleistogamia group with a secondary uterus, within this group Ozametra elegans and O. striata are placed in Seritia gen.n. differing from Ozametra by the presence of both a bursal valve and a cuticular stylet, ( ii ) the Anoplodium group with a single ovary and a muscular (not cuticular) male intromittent organ and ( iii ) the Umagilla group in which Monticellina longitubu becomes a junior synonym of U. forskalensis; within echinoids ( iv ) the Syndesmis group in which Syndisyrinx is recognized a valid genus for those worms with a bursal valve and Syndesmis for those lacking this structure. Marcusella is suppressed. A visual key based upon presumed primitive and derived states is given as is a full host check list of the Umagillidae.     

Prosorhynchine trematodes (Digenea: Bucephalidae) from epinephelines (Perciformes: Serranidae) on the Great Barrier Reef,Australia

Six new species of bucephalid trematodes from the prosorhynchine bucephalid genera Prosorhynchus Odhner, 1905 and Neidhartia Nagaty, 1937 are reported from the epinepheline genera Cephalopholis, Cromileptes, Epinephelus and Variola on the Great Barrier Reef, Australia. Two species of Prosorhynchus and one of Neidhartia are reported from Epinephelus spp., P. jexi n. sp. from E. quoyanus, P. lafii n. sp. from E. fuscoguttatus and N. epinepheli n. sp. from E. maculatus. The other three new species are P. robertsthomsoni n. sp. from Cephalopholis argus, C. cyanostigma and C. miniata, P. conorjonesi n. sp. from Cromileptes altivelis, and P. milleri n. sp. from Variola louti. Extensive examinations of other piscivorous fish species from the Great Barrier Reef have not revealed these six bucephalid species, which appear to be restricted at least to the host genera from which they are reported here.