Cytological analysis of constitutive heterochromatin in two species of birds

Two species of birds, the myna (Acridotheres tristis L.) and the jungle babbler (Turdoides malcolmi Sykes), have been studied cytologically. Their modal diploid numbers are 78±2 and 68±2 respectively. In T. malcolmi the heterochromatin is located on the centromeres of all the macros and most of the microchromosomes, heterochromatin comprises predominantly GC-sequences and at least one pair of microchromosomes is responsible for nucleolus organization. The occasional occurrence of silver deposition on more than one pair of microchromosomes suggests the possibility that more than one pair of micros may be associated with the synthesis of rRNA. The heterochromatin in A. tristis is AT-rich and restricted to the macro-chromosomes, though most of the micros are also C-band positive; no particular chromosome stains with silver nitrate, though when interphase cells are stained with acridine orange the nucleolus is surrounded by brightly fluorescing chromatin. Apparently unlike other species, the microchromosomes in the myna do not harbour NORs.     

Notes on the distribution and phylogeography of two rare small Gerbillinae (Rodentia,Muridae) in Morocco: Gerbillus simoni and Gerbillus henleyi

Even though Gerbillinae rodents represent an important part of the mammalian fauna in North Africa, many gaps remain in our understanding of the distribution, ecology, evolution, and systematics of some lesser known species in this family. We present in this study the most recent findings on two of these species. The first species, Gerbillus simoni Lataste, 1881, is a short-tailed, small gerbil, endemic to North Africa. In Morocco, it is present only in a small area in the northeast, where it has not been caught since 1970. In 2014, we captured a small gerbil in this region that was identified as G. simoni based on morphology and molecular data (cytochrome b gene sequencing). This study represents the first genetic characterization of G. simoni in Morocco and the first one outside Tunisia. Populations from Morocco and Tunisia (mainland and Kerkennah Islands) show very little genetic differentiation. The second species, Gerbillus henleyi de Winton, 1903, is a long-tailed small gerbil that lives in the Sahel and North Africa with an extension to the Middle East. In Morocco, this species was only known in the southwest. Between 2014 and 2015, we have captured four gerbils in the northeast of the country, which were confirmed genetically and morphologically as belonging to this species. This represents an extension of its known distribution of about 370 km to the northeast of the country. These new Moroccan specimens form a distinct lineage. High genetic diversity is observed throughout the geographic range of G. henleyi, suggesting the existence of several cryptic species.     

The origin of multiple sex chromosomes in the gerbil Gerbillus gerbillus (Rodentia: Gerbillinae)

The sex chromosomes of the partly sympatric species of gerbils Gerbillus pyramidum and G. gerbillus (Mammalia: Gerbillinae) were investigated by a variety of light- and electron-microscope methods, including DNA replication banding and synaptonemal complex (SC) techniques. The sex-chromosome mechanism of G. pyramidum is of the maleXY:femaleXX type, whereas that of G. gerbillus is of the less common maleXY1Y2:femaleXX system. The results include the demonstration that the X chromosomes of both species are compound. One segment is added to the X chromosome of G. pyramidum, leading to an increase in length from the standard 5% to approximately 7.3%, whereas two different extra segments increase the length of the X chromosome of G. gerbillus to approximately 11% of the length of the haploid genome. In both cases the extra material is autosomal and is also represented in the respective Y chromosomes. Classifying heterochromatin by the variation in staining quality was helpful in elucidating the possible origin of the different chromosome segments, including the pericentromeric regions. Observations on meiotic chromosome pairing and chiasma formation have confirmed the homologies established by band comparisons. The occurrence of chiasmata between the sex chromosomes supports the autosomal origin of the pairing segments. These and other findings have been interpreted in the framework of a multistep evolutionary model. This sequence starts from a hypothetical pair of sex chromosomes, the X element of which amounts to 5% of the haploid genome, and leads through three translocations involving two pairs of autosomes and one pericentric inversion to the most complex situation of this series, manifested in G. gerbillus. The adaptive value, if any, of autosome incorporation into the sex chromosomes repeatedly occurring here is unknown. It is, however, a remarkable fact that in one species, G. gerbillus, the complex sex-chromosome constitution is conserved over vast geographic distances, and in the other, G. pyramidum, the compound X and Y chromosomes withstand change in the face of extreme autosome restructuring.     

Average daily metabolic rate of gerbils of two species: Gerbillus pyramidum and Gerbillus allenbyi

Gerbillus pyramidum and G. allenbyi are primarily granivorous, nocturnal rodents that are sympatric over many sandy areas of the Negev Desert. However, in their overall distribution, G. pyramidum occurs in extreme desert areas whereas G. allenbyi does not. We measured the average daily metabolic rate (ADMR) of gerbils of each species when they were offered pelleted diet. Given the difference in their distribution, we reasoned that the more xeric G. pyramidum would have lower ADMR than G. allenbyi; however, given the similarity in their diets, we reasoned that their ADMRs would be similar. The latter alternative was supported. ADMR of G. pyramidum (body mass = 31·9 ± 5·4 g) was 427·1 kJ·kg^−0.75·d⁻¹, 58% of that predicted for a rodent of its body mass; whereas ADMR of G. allenbyi (body mass = 22·3±2·3 g) was 387·7 kJ·kg^−0.75·d⁻¹, 49%) of that predicted. On the basis of these results, we suggest that factors other than their ADMRs are important in determining their geographical distribution.     

Comparative water balance in two species of Liomys (Rodentia: Heteromyidae)

• 1.1. Water metabolism in Liomys irroratus and L. pictus was studied by measuring water loss and gain by several routes.
• 2.2. Urine concentrations and fecal water contents were similar in the two species; L. pictus experiences significantly higher evaporative water loss than does L. irroratus.
• 3.3. Observed differences in water loss between the two species are largely a function of parameters related to weight-specific metabolic rate; the differential water losses are offset by differences in metabolic water production and ease of obtaining free water, so that the two species appear equally capable of attaining water balance.
• 4.4. The physiological characteristics of these two species are discussed relative to their respective ecological distributions and to a current hypothesis about the evolution of Liomys.

     

A comparison of constitutive heterochromatin staining methods in two cases of familial heterochromatin deficiencies

Summary Using DAPI staining after pretreatment with distamycin A we detected a familial deficiency of chromosome 16 heterochromatin. A distinct positively staining band, however, was seen after C-banding. Thus, by using these different heterochromatin staining methods, heterogeneity of the constitutive heterochromatin in the centromeric region of human chromosome 16 was indicated. The same C-banding procedure was also applied to a previously described familial deficiency of chromosome 9 heterochromatin evidenced using distamycin A/DAPI staining and G 11 staining (Buys et al., 1979). In this case a C-band appeared to be virtually absent on the relevant chromosome. These staining methods may be valuable tools in the study of chromosome polymorphisms.     

Hidden heterochromatin: Characterization in the Rodentia species Cricetus cricetus, Peromyscus eremicus (Cricetidae) and Praomys tullbergi (Muridae)

The use of in situ restriction endonuclease (RE) (which cleaves DNA at specific sequences) digestion has proven to be a useful technique in improving the dissection of constitutive heterochromatin (CH), and in the understanding of the CH evolution in different genomes. In the present work we describe in detail the CH of the three Rodentia species, Cricetus cricetus, Peromyscus eremicus (family Cricetidae) and Praomys tullbergi (family Muridae) using a panel of seven REs followed by C-banding. Comparison of the amount, distribution and molecular nature of C-positive heterochromatin revealed molecular heterogeneity in the heterochromatin of the three species. The large number of subclasses of CH identified in Praomys tullbergi chromosomes indicated that the karyotype of this species is the more derived when compared with the other two genomes analyzed, probably originated by a great number of complex chromosomal rearrangements. The high level of sequence heterogeneity identified in the CH of the three genomes suggests the coexistence of different satellite DNA families, or variants of these families in these genomes.     

Intraspecific polymorphism of sex chromosome heterochromatin in two species of the Anopheles gambiae complex

The Hoechst 33258 banding pattern of the mitotic chromosomes of several laboratory and natural populations of the sibling species A. gambiae and A. arabiensis has been analyzed. A clear intraspecific polymorphism of sex chromosome heterochromatin has been observed. Nevertheless in each species heterochromatic variations fall within a characteristic species-specific pattern. Moreover, while laboratory populations tend to be monomorphic for a given heterochromatic variant, natural populations exhibit a high degree of intrapopulation polymorphism. The possible role of sex chromosome heterochromatin in controlling fertility and mating behaviour of Anopheles mosquitoes is discussed.     

Effects of supernumerary heterochromatin on chiasma condition in two species of Acrididae (Orthoptera)

Amblytropidia australis and Dichroplus elongatus were found to be polymorphic for supernumerary heterochromatin. In both, basic karyotypes are 2n=22+XO in males.Mitotically unstable extra chromosomes were detected in a population of A. australis. The Bs are telocentric and their number varies from O to 2 within individuals. Mean frequencies of interstitial and total chiasmata at diplotene were compared between individuals with and without Bs. The mean frequency of interstitial chiasmata increases with the number of Bs per cell.A supernumerary terminal segment in S₁₀ pair was observed in a heterozygous condition in several individuals of D. elongatus. The localization and frequency of chiasmata at diplotene were studied. The segment has an intrachromosomal effect since it modifies the location of chiasmata in the bivalent involved.Fellow of the Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET).     

Constitutive heterochromatin in karyotypes of two Cicadidae species from Japan (Cicadoidea,Hemiptera)

Karyotypes of males of cicadas Tibicen bihamatus (Motschulski) and Platypleura kuroiwae Matsumura were studied using C-banding technique. In Tibicen bihamatus two types of C-band distribution were observed. Two chromosome pairs have C-bands at one of the chromosome ends, while in the other, including the sex chromosome, C-heterochromatin blocks occurred at both ends. Platypleura kuroiwae has a smaller amount of C-heterochromatin located as small subterminal blocks. The intercalar C-bands were seen in the early spermatogonial metaphase chromosomes.     

Two types of constitutive heterochromatin in the chromosomes of some Fritillaria species

A Giemsa banding technique has been used to study C-banding in mitotic chromosomes in root tips of Fritillaria graeca, F. crassifolia and F. rhodocanakis, all diploids (2n=24) belonging to the graeca group. In the first two the C-bands were of two types, diverging in respect of staining regularly and specifically within chromosomes. In one type it was weak, being intermediate between that of intensely stained ones, representing the other class, and the euchromatin. In F. graeca the pale bands were proximally localized and confined to 5 pairs, whereas in F. crassifolia they occurred only in the 4 M chromosomes, in each within the centromeric constriction as a large inclusion. The interphase nuclei of both species contained pale and heavily stained chromocentres. No pale ones occurred in such nuclei of F. rhodocanakis. The probability is discussed that the two classes of C-band represent distinct types of heterochromatin, differing both in respect of condensation throughout the whole mitotic cycle and in the repetitive DNA sequences they most likely contain. In all 3 species pairs of Giemsa-positive centromeric dots, representing the centromeres, were masked both by proximally or centromerically localized bands, irrespective of the class of heterochromatin they represented.     

New families of site-specific repetitive DNA sequences that comprise constitutive heterochromatin of the Syrian hamster (Mesocricetus auratus, Cricetinae, Rodentia)

We molecularly cloned new families of site-specific repetitive DNA sequences from BglII- and EcoRI-digested genomic DNA of the Syrian hamster (Mesocricetus auratus, Cricetrinae, Rodentia) and characterized them by chromosome in situ hybridization and filter hybridization. They were classified into six different types of repetitive DNA sequence families according to chromosomal distribution and genome organization. The hybridization patterns of the sequences were consistent with the distribution of C-positive bands and/or Hoechst-stained heterochromatin. The centromeric major satellite DNA and sex chromosome-specific and telomeric region-specific repetitive sequences were conserved in the same genus (Mesocricetus) but divergent in different genera. The chromosome-2-specific sequence was conserved in two genera, Mesocricetus and Cricetulus, and a low copy number of repetitive sequences on the heterochromatic chromosome arms were conserved in the subfamily Cricetinae but not in the subfamily Calomyscinae. By contrast, the other type of repetitive sequences on the heterochromatic chromosome arms, which had sequence similarities to a LINE sequence of rodents, was conserved through the three subfamilies, Cricetinae, Calomyscinae and Murinae. The nucleotide divergence of the repetitive sequences of heterochromatin was well correlated with the phylogenetic relationships of the Cricetinae species, and each sequence has been independently amplified and diverged in the same genome.     

Characterization and chromosomal location of two repeated DNAs in three Gerbillus species

Two tandemly repeated DNA sequences of Gerbillus nigeriae (Rodentia) (GN1 and GN2) were isolated and characterized. Both share a 36 bp repeated unit, which includes a 20 bp motif also found in primate alphoid and other repeated DNAs. The localization of GN1 and GN2 sequences on metaphase chromosomes of three Gerbillus species, G. nigeriae, G. aureus and G. nanus, was studied by fluorescence in situ hybridization (FISH). In the G. nigeriae and G. aureus karyotypes, which were shown to possess large amounts of heterochromatin and to have undergone multiple rearrangements during evolution, both GN1 and GN2 sequences were observed at various chromosomal sites: centromeric, telomeric and intercalary. In contrast, the karyotypically stable G. nanus, which does not possess large amounts of heterochromatin and seems to be a more ancestral species, possesses only GN1 sequences, localized in the juxtacentromeric regions.     

Restriction enzyme and fluorochrome banding analysis of the constitutive heterochromatin of Saguinus species (Callitrichidae, Primates)

Metaphases of Saguinas fuscicollis fuscicollis and Saguinas mystax were subjected to restriction enzyme banding (Alu I, Hae III, Hin fI, Rsa I, Dde I, Mbo I and Msp I) and sequenced C-banding, together with fluorochrome staining (CMA3 and DAPI). Both species showed large C-bands in the pericentromeric regions. S. f. fuscicollis also manifested distal C-bands in both arms of pair 5 and in the short arms of pairs 8-15. In each species the heterochromatin revealed different reactions to the restriction enzymes and fluorochromes. This was related to its location in the genome (centromeric, pericentromeric, distal), making possible the identification of distinct categories of constitutive heterochromatin. In S. f. fuscicollis there were at least five types, namely centromeric in bi-armed chromosomes, centromeric in acrocentrics, pericentromeric, distal, and cryptic bands, detected only with the Alu I. There were three types in S. mystax, viz centromeric in bi-armed chromosomes, centromeric in acrocentric, and pericentromeric chromosomes. Several aspects of their constitution and origin are discussed.     

Identification of left-handed Z-DNA by indirect immunomethods in metaphasic chromosomes of a mammal, Gerbillus nigeriae (Gerbillidae, Rodentia)

Antisera and antibodies against Z-DNA were used on metaphasic fixed chromosomes of a mammal, Gerbillus nigeriae (Gerbillidae, Rodentia). By indirect immunofluorescence and indirect immunoperoxidase labelling a heavy staining was detected in a fraction of the R-band positive heterochromatic segments, which are presumed to be rich in G-C base pairs. A weak and non homogeneous staining was also observed on euchromatic segments. The presence of a left-handed Z-DNA in mammalian chromosomes is discussed.